View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5892_high_39 (Length: 266)
Name: NF5892_high_39
Description: NF5892
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5892_high_39 |
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Alignment Details
Target: chr7 (Bit Score: 210; Significance: 1e-115; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 210; E-Value: 1e-115
Query Start/End: Original strand, 1 - 256
Target Start/End: Complemental strand, 38037398 - 38037143
Alignment:
| Q |
1 |
atcaaaaaatattatattatttgagnnnnnnntcgtatcaaacaaatatacgtagatctaactctacaagtaagatcacctaaacctttttgagaattct |
100 |
Q |
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| T |
38037398 |
atcaaaaaatattatattatttgagaaaaaaatcgtatcaaacaaatatacgtagatctaactctacaagtaagatcacctaaacctttttgagaattct |
38037299 |
T |
|
| Q |
101 |
aagtcgaagattgttggnnnnnnnggttaataatcaatgaatgatgaaattggagaaatatggaggaagagttgagatttttatttggtttttgtttaga |
200 |
Q |
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||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |
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| T |
38037298 |
aagtcgaagattgttggaaaaaaaggttaataatcaatgaatgatgaaattggagaaatatggaggaagagctgagatttttatttggtttttgtttaga |
38037199 |
T |
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| Q |
201 |
tctatgcttgatagttgaatgtgaaattgtaatgaagatttaggttgttacctttg |
256 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
38037198 |
tctatgcttgatagttgaatgtgaaattgtaatgaagatttaggttgttacctttg |
38037143 |
T |
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