View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF5892_low_14 (Length: 467)

Name: NF5892_low_14
Description: NF5892
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF5892_low_14
NF5892_low_14
[»] chr6 (70 HSPs)
chr6 (15-458)||(27593102-27593545)
chr6 (146-458)||(27677696-27678008)
chr6 (187-458)||(27706484-27706755)
chr6 (187-458)||(27678780-27679051)
chr6 (187-458)||(31284122-31284393)
chr6 (189-458)||(26622812-26623081)
chr6 (189-458)||(26728790-26729059)
chr6 (20-191)||(27706785-27706956)
chr6 (36-191)||(27678595-27678750)
chr6 (185-458)||(26861448-26861721)
chr6 (185-458)||(27698576-27698849)
chr6 (185-458)||(27718461-27718734)
chr6 (189-458)||(27724927-27725196)
chr6 (189-458)||(27611084-27611353)
chr6 (189-447)||(26802278-26802536)
chr6 (189-447)||(28780975-28781233)
chr6 (185-434)||(28786110-28786359)
chr6 (185-434)||(28792231-28792480)
chr6 (185-458)||(27604787-27605066)
chr6 (187-458)||(27229066-27229337)
chr6 (185-456)||(27338149-27338420)
chr6 (185-456)||(27398889-27399160)
chr6 (213-458)||(26884023-26884268)
chr6 (185-458)||(26823678-26823945)
chr6 (185-458)||(26655821-26656094)
chr6 (185-458)||(26761792-26762065)
chr6 (185-458)||(26646305-26646584)
chr6 (185-458)||(26752273-26752552)
chr6 (251-458)||(25579617-25579824)
chr6 (251-458)||(26142763-26142970)
chr6 (251-458)||(25481640-25481847)
chr6 (251-456)||(28234462-28234667)
chr6 (242-458)||(27531279-27531495)
chr6 (251-458)||(26055824-26056031)
chr6 (251-458)||(26075794-26076001)
chr6 (251-458)||(25538438-25538645)
chr6 (251-456)||(28242702-28242907)
chr6 (184-456)||(28139372-28139644)
chr6 (251-458)||(26048743-26048950)
chr6 (251-458)||(26069912-26070119)
chr6 (327-458)||(28149912-28150042)
chr6 (353-456)||(28181114-28181217)
chr6 (353-456)||(28185366-28185469)
chr6 (353-456)||(28226950-28227053)
chr6 (353-456)||(28325481-28325584)
chr6 (357-447)||(25507002-25507092)
chr6 (121-189)||(27725237-27725310)
chr6 (184-391)||(26949489-26949699)
chr6 (368-456)||(28297797-28297885)
chr6 (368-456)||(28514188-28514276)
chr6 (368-458)||(26937109-26937199)
chr6 (369-458)||(26342016-26342105)
chr6 (283-412)||(26635620-26635749)
chr6 (283-412)||(26741586-26741715)
chr6 (323-458)||(26893553-26893688)
chr6 (69-112)||(27678008-27678051)
chr6 (272-458)||(28098451-28098637)
chr6 (353-458)||(2184288-2184393)
chr6 (132-189)||(26655721-26655784)
chr6 (132-189)||(26761692-26761755)
chr6 (257-412)||(26974956-26975111)
chr6 (272-327)||(27427816-27427871)
chr6 (284-411)||(29825958-29826085)
chr6 (272-390)||(26959084-26959202)
chr6 (284-342)||(27665315-27665373)
chr6 (132-161)||(27698918-27698947)
chr6 (132-161)||(27718805-27718834)
chr6 (365-402)||(28481232-28481269)
chr6 (353-402)||(29733186-29733235)
chr6 (365-402)||(29793656-29793693)
[»] scaffold0349 (6 HSPs)
scaffold0349 (189-458)||(3503-3773)
scaffold0349 (185-458)||(14438-14710)
scaffold0349 (121-189)||(3814-3887)
scaffold0349 (185-280)||(8061-8156)
scaffold0349 (132-161)||(8227-8256)
scaffold0349 (132-161)||(14779-14808)
[»] chr4 (7 HSPs)
chr4 (185-458)||(18724154-18724427)
chr4 (184-458)||(18679636-18679910)
chr4 (189-458)||(18655546-18655815)
chr4 (185-458)||(18699469-18699742)
chr4 (189-458)||(18731573-18731842)
chr4 (272-327)||(17989250-17989305)
chr4 (272-327)||(18073684-18073739)
[»] chr1 (3 HSPs)
chr1 (186-458)||(268426-268698)
chr1 (185-458)||(28164431-28164704)
chr1 (185-458)||(28127748-28128016)
[»] chr8 (2 HSPs)
chr8 (187-458)||(29273852-29274123)
chr8 (272-412)||(31903770-31903910)
[»] scaffold1254 (2 HSPs)
scaffold1254 (185-447)||(10-272)
scaffold1254 (18-96)||(411-489)
[»] scaffold0419 (2 HSPs)
scaffold0419 (185-447)||(7357-7619)
scaffold0419 (18-96)||(7140-7218)
[»] scaffold0277 (3 HSPs)
scaffold0277 (189-447)||(13725-13983)
scaffold0277 (185-458)||(4753-5026)
scaffold0277 (121-175)||(5083-5142)
[»] scaffold0038 (4 HSPs)
scaffold0038 (251-456)||(34623-34828)
scaffold0038 (251-456)||(42864-43069)
scaffold0038 (353-456)||(27448-27551)
scaffold0038 (353-456)||(116796-116899)
[»] scaffold0019 (1 HSPs)
scaffold0019 (270-456)||(58366-58552)
[»] chr2 (1 HSPs)
chr2 (360-458)||(3279695-3279793)
[»] scaffold0003 (1 HSPs)
scaffold0003 (272-327)||(59492-59547)
[»] chr5 (1 HSPs)
chr5 (350-412)||(16689008-16689070)


Alignment Details
Target: chr6 (Bit Score: 380; Significance: 0; HSPs: 70)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 380; E-Value: 0
Query Start/End: Original strand, 15 - 458
Target Start/End: Complemental strand, 27593545 - 27593102
Alignment:
Q  15 agatgaacagtaatgacatggaagaaattagcaagaagaagaggtggtagtacaatgattggtccacacgactataggaagttccacataccatttctgt 114  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  27593545 agatgaacagtaatgacatggaagaaattagcaagaagaagaggtggtagtacaatgattggtccacacgactataggaagtttcacataccatttctgt 27593446  T
Q  115 cataacttttctcataagttataaagttacttatcaaagacttcacagaccacaaaaacttctcattcatattctcatggctatgcaatcaccttcctct 214  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27593445 cataacttttctcataagttataaagttacttatcaaagacttcacagaccacaaaaacttctcattcatattctcatggctatgcaatcaccttcctct 27593346  T
Q  215 tccacttcaatttcctatgattacaaataccaagtattcctcagtttcagaggaagtgacactcggtacggtttcaccgggaatctctacaaggcttttg 314  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||     
T  27593345 tccacttcaatttcctatgattacaaataccaagtattcctcagtttcagaggaagtgacactcggtacggtttcaccggcaatctctacaaggctctta 27593246  T
Q  315 atgacaagggaatccacaccttcattgacaatcatgaacttcaaagaggggatgaaatcacaccatcacttctcaaggccattgaagagtctaggatttt 414  Q
     ||||||||||||| |||||||||||||  |  |||  |||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||    
T  27593245 ctgacaagggaatcaacaccttcattgatgacaatggtcttcaaagaggaaatgaaatcacaccatcacttctcaaggccattgaagagtctaggatttt 27593146  T
Q  415 tattcctgtgttttctatcacctatgcctcttcttcattttgtt 458  Q
    |||||||||||||||||||| ||||||||||||||| |||||||    
T  27593145 tattcctgtgttttctatcaactatgcctcttcttcgttttgtt 27593102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 289; E-Value: 1e-162
Query Start/End: Original strand, 146 - 458
Target Start/End: Complemental strand, 27678008 - 27677696
Alignment:
Q  146 tatcaaagacttcacagaccacaaaaacttctcattcatattctcatggctatgcaatcaccttcctcttccacttcaatttcctatgattacaaatacc 245  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  27678008 tatcaaagacttcacagaccacaaaaacttctcattcatattctcatggctatgcaatcaccttcctcttccacttcaatttcctatgagtacaaatacc 27677909  T
Q  246 aagtattcctcagtttcagaggaagtgacactcggtacggtttcaccgggaatctctacaaggcttttgatgacaagggaatccacaccttcattgacaa 345  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  27677908 aagtattcctcaatttcagaggaagtgacactcggtacggtttcaccggcaatctctacaaggctcttgatgacaagggaatccacaccttcattgacaa 27677809  T
Q  346 tcatgaacttcaaagaggggatgaaatcacaccatcacttctcaaggccattgaagagtctaggatttttattcctgtgttttctatcacctatgcctct 445  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||    
T  27677808 tcatgaacttcaaagaggggatgaaatcacaccatcacttctcaaggccattgaagagtctaggatttttattgctgtgttttctatcaactatgcctct 27677709  T
Q  446 tcttcattttgtt 458  Q
    |||||||||||||    
T  27677708 tcttcattttgtt 27677696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 248; E-Value: 1e-137
Query Start/End: Original strand, 187 - 458
Target Start/End: Complemental strand, 27706755 - 27706484
Alignment:
Q  187 tctcatggctatgcaatcaccttcctcttccacttcaatttcctatgattacaaataccaagtattcctcagtttcagaggaagtgacactcggtacggt 286  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  27706755 tctcatggctatgcaatcacctttctcttccacttcaatttcctatgagtacaaataccaagtattcctcagtttcagaggaggtgacactcggtacggt 27706656  T
Q  287 ttcaccgggaatctctacaaggcttttgatgacaagggaatccacaccttcattgacaatcatgaacttcaaagaggggatgaaatcacaccatcacttc 386  Q
    ||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  27706655 ttcacaggcaatctctacaaggcttttgatgacaagggaatccacaccttcattgacaatcatgaacttcaaagaagggatgaaatcacaccatcacttc 27706556  T
Q  387 tcaaggccattgaagagtctaggatttttattcctgtgttttctatcacctatgcctcttcttcattttgtt 458  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27706555 tcaaggccattgaagagtctaggatttttattcctgtgttttctatcacctatgcctcttcttcattttgtt 27706484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 224; E-Value: 1e-123
Query Start/End: Original strand, 187 - 458
Target Start/End: Original strand, 27678780 - 27679051
Alignment:
Q  187 tctcatggctatgcaatcaccttcctcttccacttcaatttcctatgattacaaataccaagtattcctcagtttcagaggaagtgacactcggtacggt 286  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27678780 tctcatggctatgcaatcaccttcctcttccacttcaatttcctatgagtacaaataccaagtattcctcagtttcagaggaagtgacactcggtacggt 27678879  T
Q  287 ttcaccgggaatctctacaaggcttttgatgacaagggaatccacaccttcattgacaatcatgaacttcaaagaggggatgaaatcacaccatcacttc 386  Q
    |||||||||||||||||||||||| ||  ||||||||||||| ||||||||||||| ||  |||  ||||||||||| ||||||||||||||||||||||    
T  27678880 ttcaccgggaatctctacaaggctcttactgacaagggaatcaacaccttcattgataagaatggtcttcaaagaggagatgaaatcacaccatcacttc 27678979  T
Q  387 tcaaggccattgaagagtctaggatttttattcctgtgttttctatcacctatgcctcttcttcattttgtt 458  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  27678980 tcaaggccattgaagagtctaggatttttattcctgtgttttctatcaactatgcctcttcttcattttgtt 27679051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 164; E-Value: 2e-87
Query Start/End: Original strand, 187 - 458
Target Start/End: Original strand, 31284122 - 31284393
Alignment:
Q  187 tctcatggctatgcaatcaccttcctcttccacttcaatttcctatgattacaaataccaagtattcctcagtttcagaggaagtgacactcggtacggt 286  Q
    ||||||||||||||||||| ||||||||||| |||||||||||||||  | |||||||||||||||||| |||||||| ||||||||||||||||| |||    
T  31284122 tctcatggctatgcaatcatcttcctcttcctcttcaatttcctatgtattcaaataccaagtattccttagtttcaggggaagtgacactcggtatggt 31284221  T
Q  287 ttcaccgggaatctctacaaggcttttgatgacaagggaatccacaccttcattgacaatcatgaacttcaaagaggggatgaaatcacaccatcacttc 386  Q
    |||||||| ||||||||||||||| ||  |||||||||||||||||||||||||||  ||  ||||||||||||||||||||||||||||||||||||      
T  31284222 ttcaccggcaatctctacaaggctcttactgacaagggaatccacaccttcattgatgatagtgaacttcaaagaggggatgaaatcacaccatcactcg 31284321  T
Q  387 tcaaggccattgaagagtctaggatttttattcctgtgttttctatcacctatgcctcttcttcattttgtt 458  Q
     ||| |||||||||||||||||||||||||| || |||||||||  || |||||||||||| || |||||||    
T  31284322 acaatgccattgaagagtctaggatttttatccccgtgttttctgccaactatgcctcttcgtcgttttgtt 31284393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 158; E-Value: 7e-84
Query Start/End: Original strand, 189 - 458
Target Start/End: Original strand, 26622812 - 26623081
Alignment:
Q  189 tcatggctatgcaatcaccttcctcttccacttcaatttcctatgattacaaataccaagtattcctcagtttcagaggaagtgacactcggtacggttt 288  Q
    ||||||||||||||||||| ||||||||| |||||||||||||| | | |||||||||||| ||||| ||||||||||| ||||||||||||||||||||    
T  26622812 tcatggctatgcaatcaccatcctcttcctcttcaatttcctatcaattcaaataccaagtgttcctaagtttcagaggcagtgacactcggtacggttt 26622911  T
Q  289 caccgggaatctctacaaggcttttgatgacaagggaatccacaccttcattgacaatcatgaacttcaaagaggggatgaaatcacaccatcacttctc 388  Q
    ||| || ||||||||||||||| ||  |||||||||||||||||||||||||||  ||| |||||||||||||||||| ||||||| ||||||||||  |    
T  26622912 cactggaaatctctacaaggctcttactgacaagggaatccacaccttcattgatgatcgtgaacttcaaagaggggacgaaatcaaaccatcacttgac 26623011  T
Q  389 aaggccattgaagagtctaggatttttattcctgtgttttctatcacctatgcctcttcttcattttgtt 458  Q
    || || || |||||||||||||||||||||||||||||||||  || |||||| | ||||||||||||||    
T  26623012 aatgctatcgaagagtctaggatttttattcctgtgttttctcccaactatgcatattcttcattttgtt 26623081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 158; E-Value: 7e-84
Query Start/End: Original strand, 189 - 458
Target Start/End: Original strand, 26728790 - 26729059
Alignment:
Q  189 tcatggctatgcaatcaccttcctcttccacttcaatttcctatgattacaaataccaagtattcctcagtttcagaggaagtgacactcggtacggttt 288  Q
    ||||||||||||||||||| ||||||||| |||||||||||||| | | |||||||||||| ||||| ||||||||||| ||||||||||||||||||||    
T  26728790 tcatggctatgcaatcaccatcctcttcctcttcaatttcctatcaattcaaataccaagtgttcctaagtttcagaggcagtgacactcggtacggttt 26728889  T
Q  289 caccgggaatctctacaaggcttttgatgacaagggaatccacaccttcattgacaatcatgaacttcaaagaggggatgaaatcacaccatcacttctc 388  Q
    ||| || ||||||||||||||| ||  |||||||||||||||||||||||||||  ||| |||||||||||||||||| ||||||| ||||||||||  |    
T  26728890 cactggaaatctctacaaggctcttactgacaagggaatccacaccttcattgatgatcgtgaacttcaaagaggggacgaaatcaaaccatcacttgac 26728989  T
Q  389 aaggccattgaagagtctaggatttttattcctgtgttttctatcacctatgcctcttcttcattttgtt 458  Q
    || || || |||||||||||||||||||||||||||||||||  || |||||| | ||||||||||||||    
T  26728990 aatgctatcgaagagtctaggatttttattcctgtgttttctcccaactatgcatattcttcattttgtt 26729059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 156; E-Value: 1e-82
Query Start/End: Original strand, 20 - 191
Target Start/End: Complemental strand, 27706956 - 27706785
Alignment:
Q  20 aacagtaatgacatggaagaaattagcaagaagaagaggtggtagtacaatgattggtccacacgactataggaagttccacataccatttctgtcataa 119  Q
    ||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||    
T  27706956 aacagtaacaacatggaagaaattagcaagaagaagaggtggtagtacaatgattggtccacacggctataggaagtttcacataccatttctgtcataa 27706857  T
Q  120 cttttctcataagttataaagttacttatcaaagacttcacagaccacaaaaacttctcattcatattctca 191  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27706856 cttttctcataagttataaagttacttatcaaagacttcacagaccacaaaaacttctcattcatattctca 27706785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 148; E-Value: 6e-78
Query Start/End: Original strand, 36 - 191
Target Start/End: Original strand, 27678595 - 27678750
Alignment:
Q  36 aagaaattagcaagaagaagaggtggtagtacaatgattggtccacacgactataggaagttccacataccatttctgtcataacttttctcataagtta 135  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||    
T  27678595 aagaaattagcaagaagaagaggtggtagtacaatgattggtccacacggctataggaagtttcacataccatttctgtcataacttttctcataagtta 27678694  T
Q  136 taaagttacttatcaaagacttcacagaccacaaaaacttctcattcatattctca 191  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27678695 taaagttacttatcaaagacttcacagaccacaaaaacttctcattcatattctca 27678750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 146; E-Value: 1e-76
Query Start/End: Original strand, 185 - 458
Target Start/End: Original strand, 26861448 - 26861721
Alignment:
Q  185 attctcatggctatgcaatcaccttcctcttccacttcaatttcctatgattacaaataccaagtattcctcagtttcagaggaagtgacactcggtacg 284  Q
    ||||| ||||||||||||||||||| ||||||| |||| ||||||||||  | ||||||||| ||||||||||||||||||||||||||||||||||| |    
T  26861448 attctgatggctatgcaatcaccttgctcttcctcttccatttcctatggattcaaataccaggtattcctcagtttcagaggaagtgacactcggtatg 26861547  T
Q  285 gtttcaccgggaatctctacaaggcttttgatgacaagggaatccacaccttcattgacaatcatgaacttcaaagaggggatgaaatcacaccatcact 384  Q
    |||| ||||| ||||||||||||||| ||  |||||||||||| ||||||||||| ||  ||| |||||||||||||||||||||||||| |  ||||||    
T  26861548 gttttaccggtaatctctacaaggctcttactgacaagggaattcacaccttcatggatgatcgtgaacttcaaagaggggatgaaatcaaaagatcact 26861647  T
Q  385 tctcaaggccattgaagagtctaggatttttattcctgtgttttctatcacctatgcctcttcttcattttgtt 458  Q
       ||| ||||||||||||||||| ||||| |||||||||||||||  || |||||||||||| ||||||||||    
T  26861648 cgacaatgccattgaagagtctagaattttcattcctgtgttttctgccaactatgcctcttcgtcattttgtt 26861721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 185 - 458
Target Start/End: Complemental strand, 27698849 - 27698576
Alignment:
Q  185 attctcatggctatgcaatcaccttcctcttccacttcaatttcctatgattacaaataccaagtattcctcagtttcagaggaagtgacactcggtacg 284  Q
    |||||||||||||| |||||||||||||| ||||||||| |||||||||  | ||  |||||||| ||| ||||||| || || | |||||||||| |||    
T  27698849 attctcatggctatacaatcaccttcctcatccacttcattttcctatggattcacttaccaagtgttcatcagttttaggggcactgacactcggcacg 27698750  T
Q  285 gtttcaccgggaatctctacaaggcttttgatgacaagggaatccacaccttcattgacaatcatgaacttcaaagaggggatgaaatcacaccatcact 384  Q
    |||| ||||| ||||||||||||||| ||  ||||||||||||||| |||||||||||  |  |||| ||||||||||| ||||||||||||||||||||    
T  27698749 gttttaccggaaatctctacaaggctcttactgacaagggaatccataccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcact 27698650  T
Q  385 tctcaaggccattgaagagtctaggatttttattcctgtgttttctatcacctatgcctcttcttcattttgtt 458  Q
     |||||||||||||| || ||||||||||||||||||||||||||| ||| |||||| ||||||||||||||||    
T  27698649 cctcaaggccattgatgaatctaggatttttattcctgtgttttctctcaactatgcatcttcttcattttgtt 27698576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 185 - 458
Target Start/End: Complemental strand, 27718734 - 27718461
Alignment:
Q  185 attctcatggctatgcaatcaccttcctcttccacttcaatttcctatgattacaaataccaagtattcctcagtttcagaggaagtgacactcggtacg 284  Q
    |||||||||||||| |||||||||||||| ||| ||||| | ||| |||  | ||  |||||||| ||||||||||| || || | |||||||||| ||     
T  27718734 attctcatggctatacaatcaccttcctcatcctcttcattctcccatggattcacttaccaagtgttcctcagttttaggggcactgacactcggcaca 27718635  T
Q  285 gtttcaccgggaatctctacaaggcttttgatgacaagggaatccacaccttcattgacaatcatgaacttcaaagaggggatgaaatcacaccatcact 384  Q
    |||| ||||| ||||||||||||||| ||  ||||||||||||||| |||||||||||  |  |||| ||||||||||| ||||||||||||||||||||    
T  27718634 gttttaccggaaatctctacaaggctcttactgacaagggaatccataccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcact 27718535  T
Q  385 tctcaaggccattgaagagtctaggatttttattcctgtgttttctatcacctatgcctcttcttcattttgtt 458  Q
     |||||||||||||| || ||||||||||||||||||||||||||||||| ||||||||||||||| |||||||    
T  27718534 cctcaaggccattgatgaatctaggatttttattcctgtgttttctatcaactatgcctcttcttcgttttgtt 27718461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 189 - 458
Target Start/End: Complemental strand, 27725196 - 27724927
Alignment:
Q  189 tcatggctatgcaatcaccttcctcttccacttcaatttcctatgattacaaataccaagtattcctcagtttcagaggaagtgacactcggtacggttt 288  Q
    |||||||||| |||||||||||||| ||| ||||| |||||||||  | ||  |||||||| ||||| ||||| || || | |||||||||| |||||||    
T  27725196 tcatggctatacaatcaccttcctcatcctcttcattttcctatggattcacttaccaagtgttccttagttttaggggcactgacactcggcacggttt 27725097  T
Q  289 caccgggaatctctacaaggcttttgatgacaagggaatccacaccttcattgacaatcatgaacttcaaagaggggatgaaatcacaccatcacttctc 388  Q
     ||||| ||||||||||||||| ||  ||||||||||||||| |||||||||||  |  |||| ||||||||||| |||||||||||||||||||| |||    
T  27725096 taccggaaatctctacaaggctcttactgacaagggaatccataccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcctc 27724997  T
Q  389 aaggccattgaagagtctaggatttttattcctgtgttttctatcacctatgcctcttcttcattttgtt 458  Q
    ||||||||||| || ||||||||||||||||||||||||||||||| |||||||| |||||| |||||||    
T  27724996 aaggccattgatgaatctaggatttttattcctgtgttttctatcaactatgcctattcttcgttttgtt 27724927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 130; E-Value: 3e-67
Query Start/End: Original strand, 189 - 458
Target Start/End: Complemental strand, 27611353 - 27611084
Alignment:
Q  189 tcatggctatgcaatcaccttcctcttccacttcaatttcctatgattacaaataccaagtattcctcagtttcagaggaagtgacactcggtacggttt 288  Q
    ||||||||||||||| | ||||||||||  ||||| |||||||||  | ||  |||||||| ||||||||||| || || | |||||||||  |||||||    
T  27611353 tcatggctatgcaattagcttcctcttcttcttcattttcctatggattcacttaccaagtgttcctcagttttaggggcactgacactcgccacggttt 27611254  T
Q  289 caccgggaatctctacaaggcttttgatgacaagggaatccacaccttcattgacaatcatgaacttcaaagaggggatgaaatcacaccatcacttctc 388  Q
     ||||| ||||||||||||||| ||  ||||||||||||||| |||||||||||  |  |||| |||| |||||| |||||||||||||||||||| |||    
T  27611253 taccggaaatctctacaaggctcttactgacaagggaatccataccttcattgatgacaatgatcttccaagaggagatgaaatcacaccatcactcctc 27611154  T
Q  389 aaggccattgaagagtctaggatttttattcctgtgttttctatcacctatgcctcttcttcattttgtt 458  Q
    ||||||||||| || ||||||||||||||||||||||||||||||| ||||||||||||||| |||||||    
T  27611153 aaggccattgatgaatctaggatttttattcctgtgttttctatcaactatgcctcttcttcgttttgtt 27611084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 123; E-Value: 5e-63
Query Start/End: Original strand, 189 - 447
Target Start/End: Original strand, 26802278 - 26802536
Alignment:
Q  189 tcatggctatgcaatcaccttcctcttccacttcaatttcctatgattacaaataccaagtattcctcagtttcagaggaagtgacactcggtacggttt 288  Q
    ||||||||||||| || |||||||| ||| ||||| |||| ||||  | ||  |||||||| ||||||||||| || || | ||||||||||||||||||    
T  26802278 tcatggctatgcagtctccttcctcatcctcttcattttcttatggattcacttaccaagtgttcctcagttttaggggcactgacactcggtacggttt 26802377  T
Q  289 caccgggaatctctacaaggcttttgatgacaagggaatccacaccttcattgacaatcatgaacttcaaagaggggatgaaatcacaccatcacttctc 388  Q
     || || ||||||||||||||| ||  ||||||||||||||| |||||||||||  |  |||| ||||||||||| ||||||||||||||||||||  ||    
T  26802378 tacgggcaatctctacaaggctcttattgacaagggaatccataccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcatc 26802477  T
Q  389 aaggccattgaagagtctaggatttttattcctgtgttttctatcacctatgcctcttc 447  Q
    |||||||||||||| ||||| ||||||||||||||||||||||||| ||||||||||||    
T  26802478 aaggccattgaagaatctagaatttttattcctgtgttttctatcaactatgcctcttc 26802536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 123; E-Value: 5e-63
Query Start/End: Original strand, 189 - 447
Target Start/End: Original strand, 28780975 - 28781233
Alignment:
Q  189 tcatggctatgcaatcaccttcctcttccacttcaatttcctatgattacaaataccaagtattcctcagtttcagaggaagtgacactcggtacggttt 288  Q
    ||||||||||||||| ||||||||||||| ||||| |||||| ||  | ||  |||||||| ||||||||||| || || | |||||||||  |||||||    
T  28780975 tcatggctatgcaattaccttcctcttcctcttcattttcctctgcattcacttaccaagtgttcctcagttttaggggcactgacactcgccacggttt 28781074  T
Q  289 caccgggaatctctacaaggcttttgatgacaagggaatccacaccttcattgacaatcatgaacttcaaagaggggatgaaatcacaccatcacttctc 388  Q
     ||||| ||||||||||||||| ||  ||||||||||||| | |||||||||||  |  |||| ||||||||||| |||||||||||||||||||| |||    
T  28781075 taccggcaatctctacaaggctcttactgacaagggaatcaaaaccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcctc 28781174  T
Q  389 aaggccattgaagagtctaggatttttattcctgtgttttctatcacctatgcctcttc 447  Q
    |||||||| ||||| ||||||||||||||||||||||||||||||| ||||||| ||||    
T  28781175 aaggccatcgaagaatctaggatttttattcctgtgttttctatcaactatgccacttc 28781233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 118; E-Value: 5e-60
Query Start/End: Original strand, 185 - 434
Target Start/End: Original strand, 28786110 - 28786359
Alignment:
Q  185 attctcatggctatgcaatcaccttcctcttccacttcaatttcctatgattacaaataccaagtattcctcagtttcagaggaagtgacactcggtacg 284  Q
    ||||| |||||||| |||||||||||||| ||| ||||| |||||||||  | ||  |||||||| ||||||||||| || || | |||||||||  |||    
T  28786110 attcttatggctatacaatcaccttcctcatcctcttcattttcctatggattcacttaccaagtgttcctcagttttaggggcactgacactcgccacg 28786209  T
Q  285 gtttcaccgggaatctctacaaggcttttgatgacaagggaatccacaccttcattgacaatcatgaacttcaaagaggggatgaaatcacaccatcact 384  Q
    |||| ||||| ||||||||||||||| ||  ||||||||||||| | |||||||||||  |  |||| ||||||||||| ||||||||||||||||||||    
T  28786210 gttttaccggaaatctctacaaggctcttactgacaagggaatcaaaaccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcact 28786309  T
Q  385 tctcaaggccattgaagagtctaggatttttattcctgtgttttctatca 434  Q
     ||||||||||| ||||| |||||||||||||||||||||||||||||||    
T  28786310 cctcaaggccatcgaagaatctaggatttttattcctgtgttttctatca 28786359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 118; E-Value: 5e-60
Query Start/End: Original strand, 185 - 434
Target Start/End: Original strand, 28792231 - 28792480
Alignment:
Q  185 attctcatggctatgcaatcaccttcctcttccacttcaatttcctatgattacaaataccaagtattcctcagtttcagaggaagtgacactcggtacg 284  Q
    ||||| |||||||| |||||||||||||| ||| ||||| |||||||||  | ||  |||||||| ||||||||||| || || | |||||||||  |||    
T  28792231 attcttatggctatacaatcaccttcctcatcctcttcattttcctatggattcacttaccaagtgttcctcagttttaggggcactgacactcgccacg 28792330  T
Q  285 gtttcaccgggaatctctacaaggcttttgatgacaagggaatccacaccttcattgacaatcatgaacttcaaagaggggatgaaatcacaccatcact 384  Q
    |||| ||||| ||||||||||||||| ||  ||||||||||||| | |||||||||||  |  |||| ||||||||||| ||||||||||||||||||||    
T  28792331 gttttaccggaaatctctacaaggctcttactgacaagggaatcaaaaccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcact 28792430  T
Q  385 tctcaaggccattgaagagtctaggatttttattcctgtgttttctatca 434  Q
     ||||||||||| ||||| |||||||||||||||||||||||||||||||    
T  28792431 cctcaaggccatcgaagaatctaggatttttattcctgtgttttctatca 28792480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 185 - 458
Target Start/End: Complemental strand, 27605066 - 27604787
Alignment:
Q  185 attctcatggctatgcaatcaccttcctcttccac------ttcaatttcctatgattacaaataccaagtattcctcagtttcagaggaagtgacactc 278  Q
    ||||||||||||||||||| ||||||||| ||| |      |||| |||||||||  | ||  |||||||| ||||| ||||| || || | ||||||||    
T  27605066 attctcatggctatgcaattaccttcctcatcctcatcctcttcattttcctatgcattcacttaccaagtgttccttagttttaggggcactgacactc 27604967  T
Q  279 ggtacggtttcaccgggaatctctacaaggcttttgatgacaagggaatccacaccttcattgacaatcatgaacttcaaagaggggatgaaatcacacc 378  Q
    | |||||||| ||||| ||||||||||||||| ||  |||||||||||| || |||||||||||  |  |||| |||| |||||| ||||||||||||||    
T  27604966 gatacggttttaccggcaatctctacaaggctcttactgacaagggaattcataccttcattgatgaaaatgatcttcgaagaggagatgaaatcacacc 27604867  T
Q  379 atcacttctcaaggccattgaagagtctaggatttttattcctgtgttttctatcacctatgcctcttcttcattttgtt 458  Q
    | ||||||||||||||||||| || || ||||||||||||||||||||||||||||  |||||||||||||| |||||||    
T  27604866 agcacttctcaaggccattgatgaatccaggatttttattcctgtgttttctatcaaatatgcctcttcttccttttgtt 27604787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 108; E-Value: 5e-54
Query Start/End: Original strand, 187 - 458
Target Start/End: Original strand, 27229066 - 27229337
Alignment:
Q  187 tctcatggctatgcaatcaccttcctcttccacttcaatttcctatgattacaaataccaagtattcctcagtttcagaggaagtgacactcggtacggt 286  Q
    |||||||||||| |||||||||||||||||| ||||| |||||| ||  | ||  |||||||| ||||| ||||| || || | |||||||||| |||||    
T  27229066 tctcatggctatacaatcaccttcctcttcctcttcattttcctttggattcacttaccaagtgttccttagttttaggggcactgacactcggcacggt 27229165  T
Q  287 ttcaccgggaatctctacaaggcttttgatgacaagggaatccacaccttcattgacaatcatgaacttcaaagaggggatgaaatcacaccatcacttc 386  Q
    || ||||| ||||||||||||||| ||  ||||||||||||||| |||||||||||  |  |||| ||||||||||| || |||||||||||||||||      
T  27229166 tttaccggcaatctctacaaggctcttactgacaagggaatccataccttcattgatgacaatgatcttcaaagaggagacgaaatcacaccatcactcg 27229265  T
Q  387 tcaaggccattgaagagtctaggatttttattcctgtgttttctatcacctatgcctcttcttcattttgtt 458  Q
    ||||||||||||| || ||| |||||||||||||  | ||||||  || |||||| ||||||||||||||||    
T  27229266 tcaaggccattgacgaatctcggatttttattcccatattttctgccaactatgcatcttcttcattttgtt 27229337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 108; E-Value: 5e-54
Query Start/End: Original strand, 185 - 456
Target Start/End: Complemental strand, 27338420 - 27338149
Alignment:
Q  185 attctcatggctatgcaatcaccttcctcttccacttcaatttcctatgattacaaataccaagtattcctcagtttcagaggaagtgacactcggtacg 284  Q
    |||||||||||||||||||||| |||||||||| |||||||||||| ||  | ||||||||| || ||||||||||| || |  | ||||||||  ||||    
T  27338420 attctcatggctatgcaatcactttcctcttcctcttcaatttcctctgggttcaaataccatgtgttcctcagttttagggacattgacactctttacg 27338321  T
Q  285 gtttcaccgggaatctctacaaggcttttgatgacaagggaatccacaccttcattgacaatcatgaacttcaaagaggggatgaaatcacaccatcact 384  Q
    |||| ||||| ||||||||||||||| ||  ||||||||||||| | |||||||||||  |  | || ||| ||||||| ||||||| ||||||||||||    
T  27338320 gttttaccggcaatctctacaaggctcttattgacaagggaatcaaaaccttcattgatgacaacgatcttgaaagaggagatgaaagcacaccatcact 27338221  T
Q  385 tctcaaggccattgaagagtctaggatttttattcctgtgttttctatcacctatgcctcttcttcattttg 456  Q
    | |||||||||||||||||||||||||||| |||||  | ||||||   | |||||| ||||||||||||||    
T  27338220 tgtcaaggccattgaagagtctaggattttgattcccatattttctgcaaactatgcatcttcttcattttg 27338149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 108; E-Value: 5e-54
Query Start/End: Original strand, 185 - 456
Target Start/End: Complemental strand, 27399160 - 27398889
Alignment:
Q  185 attctcatggctatgcaatcaccttcctcttccacttcaatttcctatgattacaaataccaagtattcctcagtttcagaggaagtgacactcggtacg 284  Q
    |||||||||||||||||||||| |||||||||| |||||||||||| ||  | ||||||||| || ||||||||||| || |  | ||||||||  ||||    
T  27399160 attctcatggctatgcaatcactttcctcttcctcttcaatttcctctgggttcaaataccatgtgttcctcagttttagggacattgacactctttacg 27399061  T
Q  285 gtttcaccgggaatctctacaaggcttttgatgacaagggaatccacaccttcattgacaatcatgaacttcaaagaggggatgaaatcacaccatcact 384  Q
    |||| ||||| ||||||||||||||| ||  ||||||||||||| | |||||||||||  |  | || ||| ||||||| ||||||| ||||||||||||    
T  27399060 gttttaccggcaatctctacaaggctcttattgacaagggaatcaaaaccttcattgatgacaacgatcttgaaagaggagatgaaagcacaccatcact 27398961  T
Q  385 tctcaaggccattgaagagtctaggatttttattcctgtgttttctatcacctatgcctcttcttcattttg 456  Q
    | |||||||||||||||||||||||||||| |||||  | ||||||   | |||||| ||||||||||||||    
T  27398960 tgtcaaggccattgaagagtctaggattttgattcccatattttctgcaaactatgcatcttcttcattttg 27398889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 106; E-Value: 7e-53
Query Start/End: Original strand, 213 - 458
Target Start/End: Original strand, 26884023 - 26884268
Alignment:
Q  213 cttccacttcaatttcctatgattacaaataccaagtattcctcagtttcagaggaagtgacactcggtacggtttcaccgggaatctctacaaggcttt 312  Q
    ||||| ||||| |||||||||  | ||  |||||||| |||||||||||||||||||||||||||||||| |||||||| || ||||||||||||||| |    
T  26884023 cttcctcttcattttcctatggattcacttaccaagtgttcctcagtttcagaggaagtgacactcggtatggtttcactggaaatctctacaaggctct 26884122  T
Q  313 tgatgacaagggaatccacaccttcattgacaatcatgaacttcaaagaggggatgaaatcacaccatcacttctcaaggccattgaagagtctaggatt 412  Q
    |  | |||||||||||||||||||||||||  || || | |||| ||||||    |||||||||||||||||  |||||||||||||||| ||||| |||    
T  26884123 tactaacaagggaatccacaccttcattgatgataatcatcttccaagaggaagcgaaatcacaccatcactcatcaaggccattgaagaatctagaatt 26884222  T
Q  413 tttattcctgtgttttctatcacctatgcctcttcttcattttgtt 458  Q
    ||||||||  | ||||||| || |||||| ||||||||||||||||    
T  26884223 tttattccaatattttctaccaactatgcatcttcttcattttgtt 26884268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 185 - 458
Target Start/End: Original strand, 26823678 - 26823945
Alignment:
Q  185 attctcatggctatgcaatcaccttcctcttccacttcaatttcctatgattacaaataccaagtattcctcagtttcagaggaagtgacactcggtacg 284  Q
    ||||||||||||||||| ||| ||||||||||      | |||| ||||||| |||||||||||| || |||||||| |||||   |||||||||||| |    
T  26823678 attctcatggctatgcagtcaacttcctcttc------agtttcatatgatttcaaataccaagtgtttctcagttttagaggcgctgacactcggtatg 26823771  T
Q  285 gtttcaccgggaatctctacaaggcttttgatgacaagggaatccacaccttcattgacaatcatgaacttcaaagaggggatgaaatcacaccatcact 384  Q
      || ||||| ||||||||||||||| ||   ||||||||||||||||||||  ||||  ||| ||||||||||||||||||| |||||  || ||||||    
T  26823772 aatttaccggcaatctctacaaggctcttacagacaagggaatccacaccttttttgatgatcgtgaacttcaaagaggggataaaatcgaacaatcact 26823871  T
Q  385 tctcaaggccattgaagagtctaggatttttattcctgtgttttctatcacctatgcctcttcttcattttgtt 458  Q
        || |||||||||||||||||||||||||||||||||||||||  || |||||||||||||||||||||||    
T  26823872 caataatgccattgaagagtctaggatttttattcctgtgttttctgccaactatgcctcttcttcattttgtt 26823945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 185 - 458
Target Start/End: Original strand, 26655821 - 26656094
Alignment:
Q  185 attctcatggctatgcaatcaccttcctcttccacttcaatttcctatgattacaaataccaagtattcctcagtttcagaggaagtgacactcggtacg 284  Q
    |||||||||||||| |||||||||||||| ||| ||||| |||||||||  |  ||||||||||| ||||||||||| || || | |||||| ||| |||    
T  26655821 attctcatggctatacaatcaccttcctcatcctcttcattttcctatgggtttaaataccaagtgttcctcagttttaggggcattgacacccggcacg 26655920  T
Q  285 gtttcaccgggaatctctacaaggcttttgatgacaagggaatccacaccttcattgacaatcatgaacttcaaagaggggatgaaatcacaccatcact 384  Q
    |||| ||||| ||||||||||||||| ||  ||| ||||||||||| || ||||||||  |  |||| ||||  ||||| ||||||||||||||||||||    
T  26655921 gttttaccggcaatctctacaaggctcttattgataagggaatccatactttcattgatgacaatgatcttctcagaggagatgaaatcacaccatcact 26656020  T
Q  385 tctcaaggccattgaagagtctaggatttttattcctgtgttttctatcacctatgcctcttcttcattttgtt 458  Q
      | |||||||||||||| || ||||||||||||||  | ||||||  || |||||| ||||||||||||||||    
T  26656021 cgttaaggccattgaagaatccaggatttttattcccatattttctgccaactatgcatcttcttcattttgtt 26656094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 185 - 458
Target Start/End: Original strand, 26761792 - 26762065
Alignment:
Q  185 attctcatggctatgcaatcaccttcctcttccacttcaatttcctatgattacaaataccaagtattcctcagtttcagaggaagtgacactcggtacg 284  Q
    |||||||||||||| |||||||||||||| ||| ||||| |||||||||  |  ||||||||||| ||||||||||| || || | |||||| ||| |||    
T  26761792 attctcatggctatacaatcaccttcctcatcctcttcattttcctatgggtttaaataccaagtgttcctcagttttaggggcattgacacccggcacg 26761891  T
Q  285 gtttcaccgggaatctctacaaggcttttgatgacaagggaatccacaccttcattgacaatcatgaacttcaaagaggggatgaaatcacaccatcact 384  Q
    |||| ||||| ||||||||||||||| ||  ||| ||||||||||| || ||||||||  |  |||| ||||  ||||| ||||||||||||||||||||    
T  26761892 gttttaccggcaatctctacaaggctcttattgataagggaatccatactttcattgatgacaatgatcttctcagaggagatgaaatcacaccatcact 26761991  T
Q  385 tctcaaggccattgaagagtctaggatttttattcctgtgttttctatcacctatgcctcttcttcattttgtt 458  Q
      | |||||||||||||| || ||||||||||||||  | ||||||  || |||||| ||||||||||||||||    
T  26761992 cgttaaggccattgaagaatccaggatttttattcccatattttctgccaactatgcatcttcttcattttgtt 26762065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 101; E-Value: 7e-50
Query Start/End: Original strand, 185 - 458
Target Start/End: Original strand, 26646305 - 26646584
Alignment:
Q  185 attctcatggctatgcaatcaccttcctcttccacttc------aatttcctatgattacaaataccaagtattcctcagtttcagaggaagtgacactc 278  Q
    |||||||||||||||||||| ||||||| |||| ||||      ||||||||| |  | ||  ||||| || |||||||  ||||| || ||||||||||    
T  26646305 attctcatggctatgcaatctccttcctattcctcttcctctttaatttcctacggattcacctaccaggtcttcctcaacttcaggggcagtgacactc 26646404  T
Q  279 ggtacggtttcaccgggaatctctacaaggcttttgatgacaagggaatccacaccttcattgacaatcatgaacttcaaagaggggatgaaatcacacc 378  Q
    |  ||||||| || ||  |||||||||||||| ||  |||||||||||| ||||||||||||||  ||  ||| ||| | ||||| ||||||||||||||    
T  26646405 gtgacggttttactggacatctctacaaggctcttactgacaagggaattcacaccttcattgatgattgtgatcttaagagaggagatgaaatcacacc 26646504  T
Q  379 atcacttctcaaggccattgaagagtctaggatttttattcctgtgttttctatcacctatgcctcttcttcattttgtt 458  Q
    ||||||  |||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||  ||||||||    
T  26646505 atcactcatcaaggccattgaagaatctaggatttttattcctgtgttttctatcaactatgcctcttctaaattttgtt 26646584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 101; E-Value: 7e-50
Query Start/End: Original strand, 185 - 458
Target Start/End: Original strand, 26752273 - 26752552
Alignment:
Q  185 attctcatggctatgcaatcaccttcctcttccacttc------aatttcctatgattacaaataccaagtattcctcagtttcagaggaagtgacactc 278  Q
    |||||||||||||||||||| ||||||| |||| ||||      ||||||||| |  | ||  ||||| || |||||||  ||||| || ||||||||||    
T  26752273 attctcatggctatgcaatctccttcctattcctcttcctctttaatttcctacggattcacctaccaggtcttcctcaacttcaggggcagtgacactc 26752372  T
Q  279 ggtacggtttcaccgggaatctctacaaggcttttgatgacaagggaatccacaccttcattgacaatcatgaacttcaaagaggggatgaaatcacacc 378  Q
    |  ||||||| || ||  |||||||||||||| ||  |||||||||||| ||||||||||||||  ||  ||| ||| | ||||| ||||||||||||||    
T  26752373 gtgacggttttactggacatctctacaaggctcttactgacaagggaattcacaccttcattgatgattgtgatcttaagagaggagatgaaatcacacc 26752472  T
Q  379 atcacttctcaaggccattgaagagtctaggatttttattcctgtgttttctatcacctatgcctcttcttcattttgtt 458  Q
    ||||||  |||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||  ||||||||    
T  26752473 atcactcatcaaggccattgaagaatctaggatttttattcctgtgttttctatcaactatgcctcttctaaattttgtt 26752552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 251 - 458
Target Start/End: Original strand, 25579617 - 25579824
Alignment:
Q  251 ttcctcagtttcagaggaagtgacactcggtacggtttcaccgggaatctctacaaggcttttgatgacaagggaatccacaccttcattgacaatcatg 350  Q
    ||||||||||||||||| |||||||||||  ||  ||| ||||| |||||||| |||||| ||| |||||||||||| |  |||||| ||||  || |||    
T  25579617 ttcctcagtttcagaggcagtgacactcgcaacacttttaccggtaatctctataaggctcttgttgacaagggaattcgtaccttctttgatgataatg 25579716  T
Q  351 aacttcaaagaggggatgaaatcacaccatcacttctcaaggccattgaagagtctaggatttttattcctgtgttttctatcacctatgcctcttcttc 450  Q
    | ||||||||||| ||||||||||||||||||||| |||||||||||||||| |||||||||||||||||  | ||||||  || |||||| ||||||||    
T  25579717 atcttcaaagaggagatgaaatcacaccatcacttgtcaaggccattgaagaatctaggatttttattcccatattttctgccaactatgcatcttcttc 25579816  T
Q  451 attttgtt 458  Q
    ||||||||    
T  25579817 attttgtt 25579824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 251 - 458
Target Start/End: Original strand, 26142763 - 26142970
Alignment:
Q  251 ttcctcagtttcagaggaagtgacactcggtacggtttcaccgggaatctctacaaggcttttgatgacaagggaatccacaccttcattgacaatcatg 350  Q
    |||||||||||||| || |||||||||||  ||   || ||||| |||||||| |||||| ||| |||||||||||| |  || ||||||||  || |||    
T  26142763 ttcctcagtttcaggggcagtgacactcgcaacaaatttaccggtaatctctataaggctcttgttgacaagggaattcgtactttcattgatgataatg 26142862  T
Q  351 aacttcaaagaggggatgaaatcacaccatcacttctcaaggccattgaagagtctaggatttttattcctgtgttttctatcacctatgcctcttcttc 450  Q
    | ||| ||||||| ||||||||||||||||||||| |||||||||||||||| |||||||||||||||||  | ||||||  || |||||| ||||||||    
T  26142863 atcttgaaagaggagatgaaatcacaccatcacttgtcaaggccattgaagaatctaggatttttattcccatattttctgccaactatgcatcttcttc 26142962  T
Q  451 attttgtt 458  Q
    ||||||||    
T  26142963 attttgtt 26142970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 251 - 458
Target Start/End: Original strand, 25481640 - 25481847
Alignment:
Q  251 ttcctcagtttcagaggaagtgacactcggtacggtttcaccgggaatctctacaaggcttttgatgacaagggaatccacaccttcattgacaatcatg 350  Q
    ||||||| |||||| || |||||||||||  ||  ||| ||||| |||||||| |||||| ||| |||||||||||| |  || ||||||||  |  |||    
T  25481640 ttcctcaatttcaggggcagtgacactcgcaacaattttaccggtaatctctataaggctcttgttgacaagggaattcgtactttcattgatgaaaatg 25481739  T
Q  351 aacttcaaagaggggatgaaatcacaccatcacttctcaaggccattgaagagtctaggatttttattcctgtgttttctatcacctatgcctcttcttc 450  Q
    | ||||||||||| ||||||||||||||||||||| |||||||||||||||| |||||||||| ||||||  | ||||||  || |||||| ||||||||    
T  25481740 atcttcaaagaggagatgaaatcacaccatcacttgtcaaggccattgaagaatctaggatttgtattcccatattttctgccaactatgcatcttcttc 25481839  T
Q  451 attttgtt 458  Q
    ||||||||    
T  25481840 attttgtt 25481847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 251 - 456
Target Start/End: Original strand, 28234462 - 28234667
Alignment:
Q  251 ttcctcagtttcagaggaagtgacactcggtacggtttcaccgggaatctctacaaggcttttgatgacaagggaatccacaccttcattgacaatcatg 350  Q
    ||||| ||||| ||||| ||||||||||| || ||||| ||||  |||||||| |  ||| ||  | |||||||||||||||||||||||||  |    |    
T  28234462 ttccttagttttagaggtagtgacactcgctatggttttaccgaaaatctctatagagctctttgtcacaagggaatccacaccttcattgatgacaggg 28234561  T
Q  351 aacttcaaagaggggatgaaatcacaccatcacttctcaaggccattgaagagtctaggatttttattcctgtgttttctatcacctatgcctcttcttc 450  Q
    | |||||| |||| |||||||| |||||||||||| |||||||||||||||||||||||||||| |||||||| || |||||||  ||||| ||||||||    
T  28234562 agcttcaaggaggagatgaaataacaccatcacttttcaaggccattgaagagtctaggattttcattcctgtcttgtctatcaattatgcttcttcttc 28234661  T
Q  451 attttg 456  Q
    ||||||    
T  28234662 attttg 28234667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 242 - 458
Target Start/End: Complemental strand, 27531495 - 27531279
Alignment:
Q  242 taccaagtattcctcagtttcagaggaagtgacactcggtacggtttcaccgggaatctctacaaggcttttgatgacaagggaatccacaccttcattg 341  Q
    |||||||| ||||||||||| || ||    ||||||||  ||||||| ||||| ||||||||||||||| ||  ||||||||||||| | ||||||||||    
T  27531495 taccaagtgttcctcagttttaggggcgcggacactcgccacggttttaccggaaatctctacaaggctcttactgacaagggaatctataccttcattg 27531396  T
Q  342 acaatcatgaacttcaaagaggggatgaaatcacaccatcacttctcaaggccattgaagagtctaggatttttattcctgtgttttctatcacctatgc 441  Q
    |  |  |||| ||||||||||| ||||||||||||||||||||    || ||||||||| | ||||||||||||||||| || ||||||   | ||||||    
T  27531395 atgacaatgatcttcaaagaggagatgaaatcacaccatcactaaaaaatgccattgaaaaatctaggatttttattcccgtattttctgaaaactatgc 27531296  T
Q  442 ctcttcttcattttgtt 458  Q
     ||||||||||||||||    
T  27531295 atcttcttcattttgtt 27531279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 251 - 458
Target Start/End: Original strand, 26055824 - 26056031
Alignment:
Q  251 ttcctcagtttcagaggaagtgacactcggtacggtttcaccgggaatctctacaaggcttttgatgacaagggaatccacaccttcattgacaatcatg 350  Q
    ||||||| |||||| || |||||||||||  ||  ||| ||||| |||||||| |||||| ||| ||||||||||||  | || ||||||||  |  |||    
T  26055824 ttcctcattttcaggggcagtgacactcgcaacaattttaccggtaatctctataaggctcttgttgacaagggaattaatactttcattgatgaaaatg 26055923  T
Q  351 aacttcaaagaggggatgaaatcacaccatcacttctcaaggccattgaagagtctaggatttttattcctgtgttttctatcacctatgcctcttcttc 450  Q
    | ||||||||||| |||||||||||| |||||||| |||||||||| ||||| ||| |||||||||||||  | ||||||  || |||||| ||||||||    
T  26055924 atcttcaaagaggagatgaaatcacatcatcacttgtcaaggccatcgaagaatctgggatttttattcccatattttctgccaactatgcatcttcttc 26056023  T
Q  451 attttgtt 458  Q
    ||||||||    
T  26056024 attttgtt 26056031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 251 - 458
Target Start/End: Original strand, 26075794 - 26076001
Alignment:
Q  251 ttcctcagtttcagaggaagtgacactcggtacggtttcaccgggaatctctacaaggcttttgatgacaagggaatccacaccttcattgacaatcatg 350  Q
    ||||||| |||||| || |||||||||||  ||  ||| ||||| |||||||| |||||| ||| ||||||||||||  | || ||||||||  |  |||    
T  26075794 ttcctcaatttcaggggcagtgacactcgcaacaattttaccggtaatctctataaggctcttgttgacaagggaattaatactttcattgatgaaaatg 26075893  T
Q  351 aacttcaaagaggggatgaaatcacaccatcacttctcaaggccattgaagagtctaggatttttattcctgtgttttctatcacctatgcctcttcttc 450  Q
    | ||||||||||| |||||||||||| |||||||| |||||||||| ||||| ||| |||||||||||||  | ||||||  || |||||| ||||||||    
T  26075894 atcttcaaagaggagatgaaatcacatcatcacttgtcaaggccatcgaagaatctgggatttttattcccatattttctgccaactatgcatcttcttc 26075993  T
Q  451 attttgtt 458  Q
    ||||||||    
T  26075994 attttgtt 26076001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 251 - 458
Target Start/End: Original strand, 25538438 - 25538645
Alignment:
Q  251 ttcctcagtttcagaggaagtgacactcggtacggtttcaccgggaatctctacaaggcttttgatgacaagggaatccacaccttcattgacaatcatg 350  Q
    |||||||||||||| || |||||||||||  ||   || ||||| |||||||| |||||| ||| ||||||||||||    || ||||| ||  || |||    
T  25538438 ttcctcagtttcaggggcagtgacactcgcaacaaatttaccggtaatctctataaggctcttgttgacaagggaattagtactttcatagatgataatg 25538537  T
Q  351 aacttcaaagaggggatgaaatcacaccatcacttctcaaggccattgaagagtctaggatttttattcctgtgttttctatcacctatgcctcttcttc 450  Q
    | ||| ||||||| ||||||||||||||||||||| |||||||||| ||||| ||||| |||||||||||  | ||||||  || |||||| ||||||||    
T  25538538 atcttgaaagaggagatgaaatcacaccatcacttgtcaaggccatcgaagaatctagaatttttattcccatattttctgccaactatgcatcttcttc 25538637  T
Q  451 attttgtt 458  Q
    ||||||||    
T  25538638 attttgtt 25538645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 251 - 456
Target Start/End: Original strand, 28242702 - 28242907
Alignment:
Q  251 ttcctcagtttcagaggaagtgacactcggtacggtttcaccgggaatctctacaaggcttttgatgacaagggaatccacaccttcattgacaatcatg 350  Q
    ||||| ||||| ||||| ||||||||||| || ||||| || || ||||||||||| | | ||  | | |||||||| | ||||||||||||  |    |    
T  28242702 ttccttagttttagaggtagtgacactcgttatggttttactggaaatctctacaaagatctttgtaagaagggaattcgcaccttcattgatgacagag 28242801  T
Q  351 aacttcaaagaggggatgaaatcacaccatcacttctcaaggccattgaagagtctaggatttttattcctgtgttttctatcacctatgcctcttcttc 450  Q
    |||||| | |||| ||  |||| |||||||||||| |||||||||||||||||||||||||||| |||||||| || |||||||  ||||| ||||||||    
T  28242802 aacttccaggaggtgacaaaataacaccatcacttttcaaggccattgaagagtctaggattttcattcctgtcttgtctatcaattatgcttcttcttc 28242901  T
Q  451 attttg 456  Q
    ||||||    
T  28242902 attttg 28242907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 184 - 456
Target Start/End: Original strand, 28139372 - 28139644
Alignment:
Q  184 tattctcatggctatgcaatcaccttcctcttccacttcaatttcctatgattacaaataccaagtattcctcagtttcagaggaagtgacactcggtac 283  Q
    |||| |||||||| ||||| ||||||| ||||| |||||  | |||||||  | || |||| | || || ||||| |||||||| ||||||||||| | |    
T  28139372 tattttcatggctttgcaaccaccttcttcttctacttctttctcctatggcttcacatacgatgtctttctcagcttcagaggcagtgacactcgtttc 28139471  T
Q  284 ggtttcaccgggaatctctacaaggcttttgatgacaagggaatccacaccttcattgacaatcatgaacttcaaagaggggatgaaatcacaccatcac 383  Q
    |||||||| || ||||||||||| ||| ||  ||||   ||||||||||| || |||||  ||   || |||||| |||| || |||||  |||| ||||    
T  28139472 ggtttcactggaaatctctacaaagctcttcgtgactgtggaatccacacttttattgatgatagggagcttcaaggaggtgacgaaatatcaccgtcac 28139571  T
Q  384 ttctcaaggccattgaagagtctaggatttttattcctgtgttttctatcacctatgcctcttcttcattttg 456  Q
    |  | || ||||||||||| ||||||||||| || ||||||||||| |||| ||||||||||||||| |||||    
T  28139572 tcgtaaaagccattgaagaatctaggattttcatccctgtgttttccatcaactatgcctcttcttcgttttg 28139644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 251 - 458
Target Start/End: Original strand, 26048743 - 26048950
Alignment:
Q  251 ttcctcagtttcagaggaagtgacactcggtacggtttcaccgggaatctctacaaggcttttgatgacaagggaatccacaccttcattgacaatcatg 350  Q
    |||||||||||||| || |||||||||||  ||  ||| ||||| |||||||| |||||| |   ||||||||||||    || ||||||||  || |||    
T  26048743 ttcctcagtttcaggggcagtgacactcgcaacaattttaccggtaatctctataaggctctcattgacaagggaatttgtactttcattgatgataatg 26048842  T
Q  351 aacttcaaagaggggatgaaatcacaccatcacttctcaaggccattgaagagtctaggatttttattcctgtgttttctatcacctatgcctcttcttc 450  Q
    | ||| ||||||| ||||||||||||||   |||| |||||||||| ||||| |||||||||||||||||  | ||||||  || |||||| ||||||||    
T  26048843 atcttgaaagaggagatgaaatcacacccaaacttgtcaaggccatggaagaatctaggatttttattcccatattttctgccaactatgcatcttcttc 26048942  T
Q  451 attttgtt 458  Q
    ||||||||    
T  26048943 attttgtt 26048950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 251 - 458
Target Start/End: Original strand, 26069912 - 26070119
Alignment:
Q  251 ttcctcagtttcagaggaagtgacactcggtacggtttcaccgggaatctctacaaggcttttgatgacaagggaatccacaccttcattgacaatcatg 350  Q
    |||||||||||||| || |||||||||||  ||  ||| ||||| |||||||| |||||| |   ||||||||||||    || ||||||||  || |||    
T  26069912 ttcctcagtttcaggggcagtgacactcgcaacaattttaccggtaatctctataaggctctcattgacaagggaatttgtactttcattgatgataatg 26070011  T
Q  351 aacttcaaagaggggatgaaatcacaccatcacttctcaaggccattgaagagtctaggatttttattcctgtgttttctatcacctatgcctcttcttc 450  Q
    | ||| ||||||| ||||||||||||||   |||| |||||||||| ||||| |||||||||||||||||  | ||||||  || |||||| ||||||||    
T  26070012 atcttgaaagaggagatgaaatcacacccaaacttgtcaaggccatggaagaatctaggatttttattcccatattttctgccaactatgcatcttcttc 26070111  T
Q  451 attttgtt 458  Q
    ||||||||    
T  26070112 attttgtt 26070119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 327 - 458
Target Start/End: Original strand, 28149912 - 28150042
Alignment:
Q  327 tccacaccttcattgacaatcatgaacttcaaagaggggatgaaatcacaccatcacttctcaaggccattgaagagtctaggatttttattcctgtgtt 426  Q
    ||||||||||||||||  ||   || ||| || ||||||| ||||||||||||||||| |||||||||||||||||||| |||||||| |||||  | ||    
T  28149912 tccacaccttcattgatgatacggagctttaacgaggggacgaaatcacaccatcact-ctcaaggccattgaagagtccaggattttcattccaatctt 28150010  T
Q  427 ttctatcacctatgcctcttcttcattttgtt 458  Q
     ||||||| |||| | ||||||||||||||||    
T  28150011 ctctatcaactatacttcttcttcattttgtt 28150042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 353 - 456
Target Start/End: Original strand, 28181114 - 28181217
Alignment:
Q  353 cttcaaagaggggatgaaatcacaccatcacttctcaaggccattgaagagtctaggatttttattcctgtgttttctatcacctatgcctcttcttcat 452  Q
    |||||| |||| || ||||| ||| |||||||| |||||||||||||||||||||||||||| ||||| || || |||||||  ||||| ||||||||||    
T  28181114 cttcaaggaggtgaagaaataacatcatcacttttcaaggccattgaagagtctaggattttcattcccgtcttgtctatcaattatgcttcttcttcat 28181213  T
Q  453 tttg 456  Q
    ||||    
T  28181214 tttg 28181217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 353 - 456
Target Start/End: Original strand, 28185366 - 28185469
Alignment:
Q  353 cttcaaagaggggatgaaatcacaccatcacttctcaaggccattgaagagtctaggatttttattcctgtgttttctatcacctatgcctcttcttcat 452  Q
    |||||| |||| || ||||| ||| |||||||| |||||||||||||||||||||||||||| ||||| || || |||||||  ||||| ||||||||||    
T  28185366 cttcaaggaggtgaagaaataacatcatcacttttcaaggccattgaagagtctaggattttcattcccgtcttgtctatcaattatgcttcttcttcat 28185465  T
Q  453 tttg 456  Q
    ||||    
T  28185466 tttg 28185469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 353 - 456
Target Start/End: Original strand, 28226950 - 28227053
Alignment:
Q  353 cttcaaagaggggatgaaatcacaccatcacttctcaaggccattgaagagtctaggatttttattcctgtgttttctatcacctatgcctcttcttcat 452  Q
    |||||| |||| |||||||| ||| |||||||| |||||| ||||||||| ||||||||||| |||||||| || |||||||  ||||| ||||||||||    
T  28226950 cttcaaggaggtgatgaaataacatcatcacttttcaaggtcattgaagaatctaggattttcattcctgtcttgtctatcaattatgcttcttcttcat 28227049  T
Q  453 tttg 456  Q
    ||||    
T  28227050 tttg 28227053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 353 - 456
Target Start/End: Original strand, 28325481 - 28325584
Alignment:
Q  353 cttcaaagaggggatgaaatcacaccatcacttctcaaggccattgaagagtctaggatttttattcctgtgttttctatcacctatgcctcttcttcat 452  Q
    |||||| |||| || ||||| ||||| |||||| |||||||||||||||||||||||||||| |||||| | || |||||||  ||||| |||||||| |    
T  28325481 cttcaacgaggtgacgaaataacaccgtcacttttcaaggccattgaagagtctaggattttcattcctattttgtctatcaattatgcttcttcttcct 28325580  T
Q  453 tttg 456  Q
    ||||    
T  28325581 tttg 28325584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 357 - 447
Target Start/End: Complemental strand, 25507092 - 25507002
Alignment:
Q  357 aaagaggggatgaaatcacaccatcacttctcaaggccattgaagagtctaggatttttattcctgtgttttctatcacctatgcctcttc 447  Q
    ||||||| |||||||||||||||||| |  |||  ||||||||||| ||||||||||||||||| ||  ||||||||| ||||||||||||    
T  25507092 aaagaggagatgaaatcacaccatcagtcgtcatcgccattgaagaatctaggatttttattccggttctttctatcaactatgcctcttc 25507002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 121 - 189
Target Start/End: Complemental strand, 27725310 - 27725237
Alignment:
Q  121 ttttctcataagttataaagttacttatcaaagacttc-----acagaccacaaaaacttctcattcatattct 189  Q
    ||||||||||||||||||||||||||||||||||||||     |||||||||||||| ||  ||||||||||||    
T  27725310 ttttctcataagttataaagttacttatcaaagacttcacataacagaccacaaaaatttaccattcatattct 27725237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 184 - 391
Target Start/End: Original strand, 26949489 - 26949699
Alignment:
Q  184 tattctcatggctatgcaatcac---cttcctcttccacttcaatttcctatgattacaaataccaagtattcctcagtttcagaggaagtgacactcgg 280  Q
    |||||||||||||||||||||||   ||||||| || |||||  |||| ||||||| ||| |   | || ||| | ||||||||||| |  ||||||||     
T  26949489 tattctcatggctatgcaatcactttcttcctcctctacttccttttcttatgatttcaactttgatgtgttcattagtttcagaggtaccgacactcga 26949588  T
Q  281 tacggtttcaccgggaatctctacaaggcttttgatgacaagggaatccacaccttcattgacaatcatgaacttcaaagaggggatgaaatcacaccat 380  Q
    | |||||||||||| |||||||| || ||| |   ||||||||||||||  |||||||||||  || | || ||||| | ||| || ||||||||||| |    
T  26949589 ttcggtttcaccggtaatctctataaagctctctctgacaagggaatccgaaccttcattgatgataaggagcttcagaaaggtgacgaaatcacacctt 26949688  T
Q  381 cacttctcaag 391  Q
    |||| ||||||    
T  26949689 cactcctcaag 26949699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 368 - 456
Target Start/End: Complemental strand, 28297885 - 28297797
Alignment:
Q  368 gaaatcacaccatcacttctcaaggccattgaagagtctaggatttttattcctgtgttttctatcacctatgcctcttcttcattttg 456  Q
    ||||| |||||||||||| |||||  |||||||||| |||||||||| |||||||| || |||| ||  ||||| ||||||||||||||    
T  28297885 gaaataacaccatcacttttcaagcacattgaagagactaggattttcattcctgtcttatctaccaattatgcttcttcttcattttg 28297797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 368 - 456
Target Start/End: Original strand, 28514188 - 28514276
Alignment:
Q  368 gaaatcacaccatcacttctcaaggccattgaagagtctaggatttttattcctgtgttttctatcacctatgcctcttcttcattttg 456  Q
    ||||| |||||||||||| |||||  |||||||||| |||||||||| |||||||| || |||| ||  ||||| ||||||||||||||    
T  28514188 gaaataacaccatcacttttcaagcacattgaagagactaggattttcattcctgtcttatctaccaattatgcttcttcttcattttg 28514276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 368 - 458
Target Start/End: Original strand, 26937109 - 26937199
Alignment:
Q  368 gaaatcacaccatcacttctcaaggccattgaagagtctaggatttttattcctgtgttttctatcacctatgcctcttcttcattttgtt 458  Q
    |||||||||||||||||| ||||||| |||||||| ||  |||||   || ||||| || ||||||| ||||||| |||||||||||||||    
T  26937109 gaaatcacaccatcacttgtcaaggcaattgaagattccgggattgccatacctgtattctctatcaactatgccacttcttcattttgtt 26937199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 369 - 458
Target Start/End: Complemental strand, 26342105 - 26342016
Alignment:
Q  369 aaatcacaccatcacttctcaaggccattgaagagtctaggatttttattcctgtgttttctatcacctatgcctcttcttcattttgtt 458  Q
    ||||||||| ||||||| |||| |||||||||||||| |||||||| |||||  | || || |||| |||||| |||||||| |||||||    
T  26342105 aaatcacacaatcacttgtcaaagccattgaagagtccaggattttcattccaattttctcaatcaactatgcttcttcttcgttttgtt 26342016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 283 - 412
Target Start/End: Original strand, 26635620 - 26635749
Alignment:
Q  283 cggtttcaccgggaatctctacaaggcttttgatgacaagggaatccacaccttcattgacaatcatgaacttcaaagaggggatgaaatcacaccatca 382  Q
    |||||||||||| || ||||| || ||| ||  |||||| |||||| |||||||||||||  |  | || ||| ||| |||||||||||||||||| ||     
T  26635620 cggtttcaccggtaacctctataaagctctttctgacaaaggaatcaacaccttcattgatgacaaggagcttaaaaaaggggatgaaatcacaccttcg 26635719  T
Q  383 cttctcaaggccattgaagagtctaggatt 412  Q
    || ||||||  |||||||||||| ||||||    
T  26635720 ctcctcaagagcattgaagagtcgaggatt 26635749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 283 - 412
Target Start/End: Original strand, 26741586 - 26741715
Alignment:
Q  283 cggtttcaccgggaatctctacaaggcttttgatgacaagggaatccacaccttcattgacaatcatgaacttcaaagaggggatgaaatcacaccatca 382  Q
    |||||||||||| || ||||| || ||| ||  |||||| |||||| |||||||||||||  |  | || ||| ||| |||||||||||||||||| ||     
T  26741586 cggtttcaccggtaacctctataaagctctttctgacaaaggaatcaacaccttcattgatgacaaggagcttaaaaaaggggatgaaatcacaccttcg 26741685  T
Q  383 cttctcaaggccattgaagagtctaggatt 412  Q
    || ||||||  |||||||||||| ||||||    
T  26741686 ctcctcaagagcattgaagagtcgaggatt 26741715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #55
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 323 - 458
Target Start/End: Complemental strand, 26893688 - 26893553
Alignment:
Q  323 ggaatccacaccttcattgacaatcatgaacttcaaagaggggatgaaatcacaccatcacttctcaaggccattgaagagtctaggatttttattcctg 422  Q
    ||||| ||||||||||||||  ||   || ||||| ||||| || |||||| ||||||||||| ||||||| ||||||||||||| ||| |  ||||| |    
T  26893688 ggaattcacaccttcattgatgatacagagcttcatagaggtgacgaaatctcaccatcacttatcaaggcaattgaagagtctatgatatacattccag 26893589  T
Q  423 tgttttctatcacctatgcctcttcttcattttgtt 458  Q
    |  | ||||||| |||||| ||||||  ||||||||    
T  26893588 tcctctctatcaactatgcttcttctatattttgtt 26893553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #56
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 69 - 112
Target Start/End: Complemental strand, 27678051 - 27678008
Alignment:
Q  69 atgattggtccacacgactataggaagttccacataccatttct 112  Q
    |||||||||||||||| |||||||||||| ||||||||||||||    
T  27678051 atgattggtccacacggctataggaagtttcacataccatttct 27678008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #57
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 272 - 458
Target Start/End: Complemental strand, 28098637 - 28098451
Alignment:
Q  272 gacactcggtacggtttcaccgggaatctctacaaggcttttgatgacaagggaatccacaccttcattgacaatcatgaacttcaaagaggggatgaaa 371  Q
    ||||||||||| ||||| || || ||||||||||| ||| ||  ||||   ||| ||| ||||||||||||| || | || |||||   ||| |||  ||    
T  28098637 gacactcggtatggttttactggaaatctctacaaagctctttgtgacggaggagtccgcaccttcattgaccataaagatcttcatgaaggtgatagaa 28098538  T
Q  372 tcacaccatcacttctcaaggccattgaagagtctaggatttttattcctgtgttttctatcacctatgcctcttcttcattttgtt 458  Q
    |||||| ||| ||| |||||||||| |||||||| |||||||| ||||| || || ||||  | |||||| |||||||  |||||||    
T  28098537 tcacacaatcccttgtcaaggccatcgaagagtccaggattttaattccggtcttctctaagaactatgcttcttctttgttttgtt 28098451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #58
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 353 - 458
Target Start/End: Original strand, 2184288 - 2184393
Alignment:
Q  353 cttcaaagaggggatgaaatcacaccatcacttctcaaggccattgaagagtctaggatttttattcctgtgttttctatcacctatgcctcttcttcat 452  Q
    |||||| |||||| |||||| ||| |||||||| | || |||||||||||||| || ||||| || ||||| || || |  | |||||| ||||||||||    
T  2184288 cttcaacgagggggtgaaataacagcatcacttatgaaagccattgaagagtccagaattttcatccctgttttctcaaagaactatgcttcttcttcat 2184387  T
Q  453 tttgtt 458  Q
    ||||||    
T  2184388 tttgtt 2184393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #59
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 132 - 189
Target Start/End: Original strand, 26655721 - 26655784
Alignment:
Q  132 gttataaagttacttatcaaagact-----tcacagaccacaaaaactt-ctcattcatattct 189  Q
    |||||||||||||||| ||||||||     ||||||||||||||||||| ||||||||||||||    
T  26655721 gttataaagttacttaccaaagactttacatcacagaccacaaaaacttactcattcatattct 26655784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #60
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 132 - 189
Target Start/End: Original strand, 26761692 - 26761755
Alignment:
Q  132 gttataaagttacttatcaaagact-----tcacagaccacaaaaactt-ctcattcatattct 189  Q
    |||||||||||||||| ||||||||     ||||||||||||||||||| ||||||||||||||    
T  26761692 gttataaagttacttaccaaagactttacatcacagaccacaaaaacttactcattcatattct 26761755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #61
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 257 - 412
Target Start/End: Original strand, 26974956 - 26975111
Alignment:
Q  257 agtttcagaggaagtgacactcggtacggtttcaccgggaatctctacaaggcttttgatgacaagggaatccacaccttcattgacaatcatgaacttc 356  Q
    ||||||||||| |  |||||||| | |||||||||||| || ||||| || ||| ||  |||||| |||||| ||| |||||||||  |  | || |||     
T  26974956 agtttcagaggtaccgacactcgattcggtttcaccggtaacctctataaagctctttctgacaaaggaatcaacatcttcattgatgacaaggagctta 26975055  T
Q  357 aaagaggggatgaaatcacaccatcacttctcaaggccattgaagagtctaggatt 412  Q
    ||| |||||| ||||||||||| || || ||||||  ||||||||| || ||||||    
T  26975056 aaaaaggggacgaaatcacaccttcgctcctcaagagcattgaagactcgaggatt 26975111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #62
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 272 - 327
Target Start/End: Complemental strand, 27427871 - 27427816
Alignment:
Q  272 gacactcggtacggtttcaccgggaatctctacaaggcttttgatgacaagggaat 327  Q
    ||||||||||||||||||||||| |||||||  |||||| ||  ||||||||||||    
T  27427871 gacactcggtacggtttcaccggcaatctcttgaaggctcttattgacaagggaat 27427816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #63
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 284 - 411
Target Start/End: Original strand, 29825958 - 29826085
Alignment:
Q  284 ggtttcaccgggaatctctacaaggcttttgatgacaagggaatccacaccttcattgacaatcatgaacttcaaagaggggatgaaatcacaccatcac 383  Q
    ||||| ||||| ||||||||||| ||| |   |||||||  ||| | ||||||||||||  |  | || |||||||||||||| ||||||||||| ||||    
T  29825958 ggttttaccggcaatctctacaaagctctaactgacaagaaaattcgcaccttcattgatgacaaagagcttcaaagaggggacgaaatcacaccctcac 29826057  T
Q  384 ttctcaaggccattgaagagtctaggat 411  Q
    || | ||||| ||| |||| ||||||||    
T  29826058 ttgtgaaggcaattcaagaatctaggat 29826085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #64
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 272 - 390
Target Start/End: Original strand, 26959084 - 26959202
Alignment:
Q  272 gacactcggtacggtttcaccgggaatctctacaaggcttttgatgacaagggaatccacaccttcattgacaatcatgaacttcaaagaggggatgaaa 371  Q
    |||||||| | | |||||||||| || ||||| || ||| ||  |||||| |||||| |||||||||||||  |  | || ||| ||| |||||||||||    
T  26959084 gacactcgattcagtttcaccggtaacctctataaagctctttctgacaaaggaatcgacaccttcattgatgacaaagagcttaaaaaaggggatgaaa 26959183  T
Q  372 tcacaccatcacttctcaa 390  Q
    ||||||| || ||||||||    
T  26959184 tcacaccttcgcttctcaa 26959202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #65
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 284 - 342
Target Start/End: Complemental strand, 27665373 - 27665315
Alignment:
Q  284 ggtttcaccgggaatctctacaaggcttttgatgacaagggaatccacaccttcattga 342  Q
    ||||||||||| || ||||| |||||| ||  |||||| ||||||||||||||||||||    
T  27665373 ggtttcaccggtaacctctataaggctctttctgacaaaggaatccacaccttcattga 27665315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #66
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 132 - 161
Target Start/End: Complemental strand, 27698947 - 27698918
Alignment:
Q  132 gttataaagttacttatcaaagacttcaca 161  Q
    ||||||||||||||||||||||||||||||    
T  27698947 gttataaagttacttatcaaagacttcaca 27698918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #67
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 132 - 161
Target Start/End: Complemental strand, 27718834 - 27718805
Alignment:
Q  132 gttataaagttacttatcaaagacttcaca 161  Q
    ||||||||||||||||||||||||||||||    
T  27718834 gttataaagttacttatcaaagacttcaca 27718805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #68
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 365 - 402
Target Start/End: Complemental strand, 28481269 - 28481232
Alignment:
Q  365 gatgaaatcacaccatcacttctcaaggccattgaaga 402  Q
    |||||||||||||||||||||||||| || ||||||||    
T  28481269 gatgaaatcacaccatcacttctcaaagcaattgaaga 28481232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #69
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 353 - 402
Target Start/End: Complemental strand, 29733235 - 29733186
Alignment:
Q  353 cttcaaagaggggatgaaatcacaccatcacttctcaaggccattgaaga 402  Q
    ||||||| ||| || ||||||||||||||||||||||| || ||||||||    
T  29733235 cttcaaaaaggcgaagaaatcacaccatcacttctcaaagcaattgaaga 29733186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #70
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 365 - 402
Target Start/End: Complemental strand, 29793693 - 29793656
Alignment:
Q  365 gatgaaatcacaccatcacttctcaaggccattgaaga 402  Q
    |||||||||||||||||||||||||| || ||||||||    
T  29793693 gatgaaatcacaccatcacttctcaaagcaattgaaga 29793656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0349 (Bit Score: 139; Significance: 1e-72; HSPs: 6)
Name: scaffold0349
Description:

Target: scaffold0349; HSP #1
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 189 - 458
Target Start/End: Complemental strand, 3773 - 3503
Alignment:
Q  189 tcatggctatgcaatcaccttcctcttccacttcaatttcctatgattacaaataccaagtattcctcagtttcagaggaagtgacactcggtacggttt 288  Q
    |||||||||| |||||||||||||| ||| ||||| |||||||||  | ||  |||||||| ||||| ||||| || || | |||||||||| |||||||    
T  3773 tcatggctatacaatcaccttcctcatcctcttcattttcctatggattcacttaccaagtgttccttagttttaggggcactgacactcggcacggttt 3674  T
Q  289 caccgggaatctctacaaggcttttgatgacaagggaatccacaccttcattgacaatcatgaacttcaaagaggggatgaaatcacaccatcacttctc 388  Q
     ||||| ||||||||||||||| ||  ||||||||||||||| |||||||||||  |  |||| ||||||||||| |||||||||||||||||||| |||    
T  3673 taccggaaatctctacaaggctcttactgacaagggaatccataccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcctc 3574  T
Q  389 aaggccattgaagagtctaggatttttattcctgtgttttctatc-acctatgcctcttcttcattttgtt 458  Q
    ||||||||||| || |||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  3573 aaggccattgatgaatctaggatttttattcctgtgttttctatcaacctatgcctcttcttcattttgtt 3503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0349; HSP #2
Raw Score: 138; E-Value: 6e-72
Query Start/End: Original strand, 185 - 458
Target Start/End: Complemental strand, 14710 - 14438
Alignment:
Q  185 attctcatggctatgcaatcaccttcctcttccacttcaatttcctatgattacaaataccaagtattcctcagtttcagaggaagtgacactcggtacg 284  Q
    |||||||||||||| |||||||||||||| ||||||||| |||||||||  | ||  |||||||| ||| ||||||| || || | |||||||||| |||    
T  14710 attctcatggctatacaatcaccttcctcatccacttcattttcctatggattcacttaccaagtgttcatcagttttaggggcactgacactcggcacg 14611  T
Q  285 gtttcaccgggaatctctacaaggcttttgatgacaagggaatccacaccttcattgacaatcatgaacttcaaagaggggatgaaatcacaccatcact 384  Q
    |||| ||||| ||||||||||||||| ||  ||||||||||||||| |||||||||||  |  |||| ||||||||||| ||||||||||||||||||||    
T  14610 gttttaccggaaatctctacaaggctcttactgacaagggaatccataccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcact 14511  T
Q  385 tctcaaggccattgaagagtctaggatttttattcctgtgttttctatcacctatgcctcttcttcattttgtt 458  Q
     |||||||||||||| || ||||||||||||||||||||||||||||||| |||||||| |||||| |||||||    
T  14510 cctcaaggccattgatgaatctaggatttttattcctgtgttttctatcaactatgcct-ttcttcgttttgtt 14438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0349; HSP #3
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 121 - 189
Target Start/End: Complemental strand, 3887 - 3814
Alignment:
Q  121 ttttctcataagttataaagttacttatcaaagacttc-----acagaccacaaaaacttctcattcatattct 189  Q
    ||||||||||||||||||||||||||||||||||||||     |||||||||||||| ||  ||||||||||||    
T  3887 ttttctcataagttataaagttacttatcaaagacttcacataacagaccacaaaaatttaccattcatattct 3814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0349; HSP #4
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 185 - 280
Target Start/End: Complemental strand, 8156 - 8061
Alignment:
Q  185 attctcatggctatgcaatcaccttcctcttccacttcaatttcctatgattacaaataccaagtattcctcagtttcagaggaagtgacactcgg 280  Q
    |||||||||||||| |||||||||||||| ||| ||||| | ||| |||  | ||  |||||||| ||||||||||| || || | ||||||||||    
T  8156 attctcatggctatacaatcaccttcctcatcctcttcattctcccatggattcacttaccaagtgttcctcagttttaggggcactgacactcgg 8061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0349; HSP #5
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 132 - 161
Target Start/End: Complemental strand, 8256 - 8227
Alignment:
Q  132 gttataaagttacttatcaaagacttcaca 161  Q
    ||||||||||||||||||||||||||||||    
T  8256 gttataaagttacttatcaaagacttcaca 8227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0349; HSP #6
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 132 - 161
Target Start/End: Complemental strand, 14808 - 14779
Alignment:
Q  132 gttataaagttacttatcaaagacttcaca 161  Q
    ||||||||||||||||||||||||||||||    
T  14808 gttataaagttacttatcaaagacttcaca 14779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 131; Significance: 9e-68; HSPs: 7)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 131; E-Value: 9e-68
Query Start/End: Original strand, 185 - 458
Target Start/End: Complemental strand, 18724427 - 18724154
Alignment:
Q  185 attctcatggctatgcaatcaccttcctcttccacttcaatttcctat-gattacaaataccaagtattcctcagtttcagaggaagtgacactcggtac 283  Q
    ||||||||||||||||||||||||||||| ||| ||||| |||||||| |||| ||  |||||||| |||||||| ||||| || |||||||||||  ||    
T  18724427 attctcatggctatgcaatcaccttcctcatcctcttcattttcctatcgatt-cacttaccaagtgttcctcagcttcaggggcagtgacactcgtaac 18724329  T
Q  284 ggtttcaccgggaatctctacaaggcttttgatgacaagggaatccacaccttcattgacaatcatgaacttcaaagaggggatgaaatcacaccatcac 383  Q
    ||||| || ||  |||||||||||||| ||  |||||||||||||||||||||||||||  | | ||| || ||||||||||||||||||| ||||||||    
T  18724328 ggttttactggtcatctctacaaggctcttactgacaagggaatccacaccttcattgatgaccgtgacctgcaaagaggggatgaaatcaaaccatcac 18724229  T
Q  384 ttctcaaggccattgaagagtctaggatttttattcctgtgttttctatcacctatgcctcttcttcattttgtt 458  Q
    |   ||| |||||||||||||||||||| || ||||||||||||||||||| |||||||||||||||||||||||    
T  18724228 tcgacaatgccattgaagagtctaggatcttcattcctgtgttttctatcaactatgcctcttcttcattttgtt 18724154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 184 - 458
Target Start/End: Complemental strand, 18679910 - 18679636
Alignment:
Q  184 tattctcatggctatgcaatcaccttcctcttccacttcaatttcctat-gattacaaataccaagtattcctcagtttcagaggaagtgacactcggta 282  Q
    |||| ||||||||||||||||||||||||| | | ||||| |||||||| |||| ||  |||||||| |||||||| ||||| || |||||||||||  |    
T  18679910 tattttcatggctatgcaatcaccttcctcattctcttcattttcctatcgatt-cacttaccaagtgttcctcagcttcaggggcagtgacactcgtaa 18679812  T
Q  283 cggtttcaccgggaatctctacaaggcttttgatgacaagggaatccacaccttcattgacaatcatgaacttcaaagaggggatgaaatcacaccatca 382  Q
    |||||| || ||  |||||||||||||| ||  |||||| ||||||||||||||||||||  | | ||| || ||||||||||||||||||| |||||||    
T  18679811 cggttttactggtcatctctacaaggctcttactgacaaaggaatccacaccttcattgatgaccgtgacctgcaaagaggggatgaaatcaaaccatca 18679712  T
Q  383 cttctcaaggccattgaagagtctaggatttttattcctgtgttttctatcacctatgcctcttcttcattttgtt 458  Q
    ||   ||| |||||||||||||||||||| || ||||||||||||||||||| |||||||||||||||||||||||    
T  18679711 ctcgacaatgccattgaagagtctaggatcttcattcctgtgttttctatcaactatgcctcttcttcattttgtt 18679636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 189 - 458
Target Start/End: Complemental strand, 18655815 - 18655546
Alignment:
Q  189 tcatggctatgcaatcaccttcctcttccacttcaatttcctat-gattacaaataccaagtattcctcagtttcagaggaagtgacactcggtacggtt 287  Q
    ||||||||| ||||||||||||||| ||| ||||| |||||||| |||| ||  |||||||| |||||||| ||||| || |||||||||||  ||||||    
T  18655815 tcatggctaggcaatcaccttcctcatcctcttcattttcctatcgatt-cacttaccaagtgttcctcagcttcaggggcagtgacactcgtaacggtt 18655717  T
Q  288 tcaccgggaatctctacaaggcttttgatgacaagggaatccacaccttcattgacaatcatgaacttcaaagaggggatgaaatcacaccatcacttct 387  Q
    | || ||| |||||||||| ||| ||  |||||||||||||||||||||||||||  | | ||| || ||||| ||||||||||||| |||||||||       
T  18655716 ttactgggcatctctacaaagctcttactgacaagggaatccacaccttcattgatgaccgtgagctgcaaagtggggatgaaatcaaaccatcactcga 18655617  T
Q  388 caaggccattgaagagtctaggatttttattcctgtgttttctatcacctatgcctcttcttcattttgtt 458  Q
    ||| |||||| ||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||    
T  18655616 caatgccattcaagagtctaggatctttattcctgtgttttctatcaactatgcctcttcttcattttgtt 18655546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 185 - 458
Target Start/End: Complemental strand, 18699742 - 18699469
Alignment:
Q  185 attctcatggctatgcaatcaccttcctcttccacttcaatttcctat-gattacaaataccaagtattcctcagtttcagaggaagtgacactcggtac 283  Q
    ||||||||||||||||||||||||||||| ||| ||||| |||||||| |||| ||  |||||||| |||||||| ||||| || | |||||||||  ||    
T  18699742 attctcatggctatgcaatcaccttcctcatcctcttcattttcctatcgatt-cacttaccaagtgttcctcagcttcaggggcactgacactcgtgac 18699644  T
Q  284 ggtttcaccgggaatctctacaaggcttttgatgacaagggaatccacaccttcattgacaatcatgaacttcaaagaggggatgaaatcacaccatcac 383  Q
    ||||| || ||  |||||||||| ||| ||  |||||||||||||||||||||||||||  | | ||| || ||||| ||||||||||||| ||||||||    
T  18699643 ggttttactggccatctctacaaagctcttactgacaagggaatccacaccttcattgatgaccgtgacctgcaaagtggggatgaaatcaaaccatcac 18699544  T
Q  384 ttctcaaggccattgaagagtctaggatttttattcctgtgttttctatcacctatgcctcttcttcattttgtt 458  Q
    |   ||| |||||||||||||||||||| || ||||||||||||||||||| |||||||||||||||||||||||    
T  18699543 tcgacaatgccattgaagagtctaggatcttcattcctgtgttttctatcaactatgcctcttcttcattttgtt 18699469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 189 - 458
Target Start/End: Complemental strand, 18731842 - 18731573
Alignment:
Q  189 tcatggctatgcaatcaccttcctcttccacttcaatttcctat-gattacaaataccaagtattcctcagtttcagaggaagtgacactcggtacggtt 287  Q
    ||||||||||||||||||||||||| ||| ||||| |||||||| |||| ||  |||||||| |||||||| ||||| || |||||||||||  ||||||    
T  18731842 tcatggctatgcaatcaccttcctcatcctcttcattttcctatcgatt-cacttaccaagtgttcctcagcttcaggggcagtgacactcgtgacggtt 18731744  T
Q  288 tcaccgggaatctctacaaggcttttgatgacaagggaatccacaccttcattgacaatcatgaacttcaaagaggggatgaaatcacaccatcacttct 387  Q
    | || ||  |||||||||  ||| ||  |||||||||||||||||||||||||||  | | ||| || ||||||||||||||||||| |||||||||       
T  18731743 ttactggccatctctacagagctcttactgacaagggaatccacaccttcattgatgaccgtgacctgcaaagaggggatgaaatcaaaccatcactcga 18731644  T
Q  388 caaggccattgaagagtctaggatttttattcctgtgttttctatcacctatgcctcttcttcattttgtt 458  Q
    ||| |||||||||||||||||||| || ||||||||||||||||||| |||||||||||||||||||||||    
T  18731643 caatgccattgaagagtctaggatcttcattcctgtgttttctatcaactatgcctcttcttcattttgtt 18731573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 272 - 327
Target Start/End: Complemental strand, 17989305 - 17989250
Alignment:
Q  272 gacactcggtacggtttcaccgggaatctctacaaggcttttgatgacaagggaat 327  Q
    ||||||||||||||||||||||| |||||||  |||||| ||  ||||||||||||    
T  17989305 gacactcggtacggtttcaccggcaatctcttgaaggctcttattgacaagggaat 17989250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 272 - 327
Target Start/End: Original strand, 18073684 - 18073739
Alignment:
Q  272 gacactcggtacggtttcaccgggaatctctacaaggcttttgatgacaagggaat 327  Q
    ||||||||||||||||||||||| |||||||  |||||| ||  ||||||||||||    
T  18073684 gacactcggtacggtttcaccggcaatctcttgaaggctcttattgacaagggaat 18073739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 129; Significance: 1e-66; HSPs: 3)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 186 - 458
Target Start/End: Complemental strand, 268698 - 268426
Alignment:
Q  186 ttctcatggctatgcaatcaccttcctcttccacttcaatttcctatgattacaaataccaagtattcctcagtttcagaggaagtgacactcggtacgg 285  Q
    |||||||||||||||||||||||||||||||| ||||||| || ||||  |     ||||| || |||||||  ||||||||  ||||||||||  | ||    
T  268698 ttctcatggctatgcaatcaccttcctcttcctcttcaatctcatatggatttgcctaccaggtcttcctcaacttcagaggcggtgacactcgtgaggg 268599  T
Q  286 tttcaccgggaatctctacaaggcttttgatgacaagggaatccacaccttcattgacaatcatgaacttcaaagaggggatgaaatcacaccatcactt 385  Q
    ||| |  ||  |||||||||||||| ||  |||||||||||||||||||||||||||  ||| |||||||||||||||||||||||||| |||||||||     
T  268598 ttttattggccatctctacaaggctcttactgacaagggaatccacaccttcattgatgatcgtgaacttcaaagaggggatgaaatcaaaccatcactc 268499  T
Q  386 ctcaaggccattgaagagtctaggatttttattcctgtgttttctatcacctatgcctcttcttcattttgtt 458  Q
      ||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  268498 gacaatgccattgaagagtctaggatttttattcctgtgttttctatcaactatgcctcttcttcattttgtt 268426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 185 - 458
Target Start/End: Complemental strand, 28164704 - 28164431
Alignment:
Q  185 attctcatggctatgcaatcaccttcctcttccacttcaatttcctatgattacaaataccaagtattcctcagtttcagaggaagtgacactcggtacg 284  Q
    |||||||||||||| | ||| | |||||||||| |||||||||||||||  | || ||||||||| ||||||||||| || || |||||||||||  |||    
T  28164704 attctcatggctatacgatcgcattcctcttcctcttcaatttcctatggattcacataccaagtgttcctcagttttaggggcagtgacactcgtgacg 28164605  T
Q  285 gtttcaccgggaatctctacaaggcttttgatgacaagggaatccacaccttcattgacaatcatgaacttcaaagaggggatgaaatcacaccatcact 384  Q
    ||||||| ||  ||||||| |||||  |||| ||||||||||| ||||| ||||||||  ||  ||| ||| | ||||| || ||||||||||| ||| |    
T  28164604 gtttcactggccatctctataaggcccttgacgacaagggaattcacacattcattgatgattgtgatcttgagagaggagaagaaatcacaccgtcatt 28164505  T
Q  385 tctcaaggccattgaagagtctaggatttttattcctgtgttttctatcacctatgcctcttcttcattttgtt 458  Q
      |||||||||||||| | ||| | ||||||||||||||||| ||||||| |||||||||||||||||||||||    
T  28164504 catcaaggccattgaaaaatcttgaatttttattcctgtgttatctatcaactatgcctcttcttcattttgtt 28164431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 185 - 458
Target Start/End: Complemental strand, 28128016 - 28127748
Alignment:
Q  185 attctcatggctatgcaatcaccttcctcttccacttcaatttcctatgattacaaataccaagtattcctcagtttcagaggaagtgacactcggtacg 284  Q
    |||||||||||||||||||||| |||||||||      |||||||||||  | || ||||||||| |||||||| ||||| || |||||||||||  |||    
T  28128016 attctcatggctatgcaatcacattcctcttc------aatttcctatggattcacataccaagtgttcctcagcttcaggggcagtgacactcgtgacg 28127923  T
Q  285 gtttcaccgggaatctctacaaggcttttgatgacaagggaatccacaccttcattgacaatcatgaacttcaaagaggggatgaaa-tcacaccatcac 383  Q
    ||||||| ||  |||||||||||||  || ||||||||||||||||||| ||||||||  ||  | | ||| | ||||| ||  ||| ||||||| ||||    
T  28127922 gtttcactggccatctctacaaggccctttatgacaagggaatccacacattcattgatgattgtaatcttgagagaggagaaaaaaatcacaccgtcac 28127823  T
Q  384 ttctcaaggccattgaagagtctaggatttttattcctgtgttttctatcacctatgcctcttcttcattttgtt 458  Q
    || | |||||||||||||| ||||| |||||||||||||| ||||||| || |||||||||||||||||||||||    
T  28127822 ttttaaaggccattgaagaatctagaatttttattcctgtattttctaccaactatgcctcttcttcattttgtt 28127748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 120; Significance: 3e-61; HSPs: 2)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 187 - 458
Target Start/End: Complemental strand, 29274123 - 29273852
Alignment:
Q  187 tctcatggctatgcaatcaccttcctcttccacttcaatttcctatgattacaaataccaagtattcctcagtttcagaggaagtgacactcggtacggt 286  Q
    ||||||||||||||||||||||||||||||| ||||||| || ||||  | ||  ||||| || |||||||  || |||||  ||||||||||  |||||    
T  29274123 tctcatggctatgcaatcaccttcctcttcctcttcaatctcatatggattcacttaccaggtcttcctcaactttagaggcggtgacactcgtgacggt 29274024  T
Q  287 ttcaccgggaatctctacaaggcttttgatgacaagggaatccacaccttcattgacaatcatgaacttcaaagaggggatgaaatcacaccatcacttc 386  Q
    || |  ||  ||||||||||| || ||  |||||||||||||||||||||||||||  ||| |||||||||||||||||||||||||| | |||||||      
T  29274023 tttattggccatctctacaagactcttactgacaagggaatccacaccttcattgatgatcgtgaacttcaaagaggggatgaaatcaaatcatcactcg 29273924  T
Q  387 tcaaggccattgaagagtctaggatttttattcctgtgttttctatcacctatgcctcttcttcattttgtt 458  Q
     ||| | ||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||    
T  29273923 acaatgtcattgaagagtctagaatttttattcctgtgttttctatcaactatgcctcttcttcattttgtt 29273852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 272 - 412
Target Start/End: Original strand, 31903770 - 31903910
Alignment:
Q  272 gacactcggtacggtttcaccgggaatctctacaaggcttttgatgacaagggaatccacaccttcattgacaatcatgaacttcaaagaggggatgaaa 371  Q
    |||||||| || ||||| || || ||||||||||| ||| || |||| ||||||||||||||||| |||||| || | ||||||||||||||  ||||||    
T  31903770 gacactcgctatggttttactggaaatctctacaaagctctttatgataagggaatccacacctttattgacgatgaagaacttcaaagaggacatgaaa 31903869  T
Q  372 tcacaccatcacttctcaaggccattgaagagtctaggatt 412  Q
    |||||||||||||| |  |||| ||||||||||||||||||    
T  31903870 tcacaccatcacttttagaggcaattgaagagtctaggatt 31903910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1254 (Bit Score: 119; Significance: 1e-60; HSPs: 2)
Name: scaffold1254
Description:

Target: scaffold1254; HSP #1
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 185 - 447
Target Start/End: Complemental strand, 272 - 10
Alignment:
Q  185 attctcatggctatgcaatcaccttcctcttccacttcaatttcctatgattacaaataccaagtattcctcagtttcagaggaagtgacactcggtacg 284  Q
    |||||||||||||||||||||||| |||||||| ||||| |||| ||||  | ||  |||||||| ||||| ||||| || || | |||||||||  |||    
T  272 attctcatggctatgcaatcacctccctcttcctcttcattttcatatgcattcacttaccaagtgttccttagttttaggggcactgacactcgccacg 173  T
Q  285 gtttcaccgggaatctctacaaggcttttgatgacaagggaatccacaccttcattgacaatcatgaacttcaaagaggggatgaaatcacaccatcact 384  Q
    |||| ||||| ||||||||||||||| ||  ||||||||||||| | |||||||||||  |  |||| ||||||||||| ||||||||||||||||||||    
T  172 gttttaccggcaatctctacaaggctcttactgacaagggaatcaaaaccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcact 73  T
Q  385 tctcaaggccattgaagagtctaggatttttattcctgtgttttctatcacctatgcctcttc 447  Q
     ||||||||||| ||||| ||||||||||||||||||||||||||||||| ||| ||| ||||    
T  72 cctcaaggccatcgaagaatctaggatttttattcctgtgttttctatcaactacgccacttc 10  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1254; HSP #2
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 18 - 96
Target Start/End: Complemental strand, 489 - 411
Alignment:
Q  18 tgaacagtaatgacatggaagaaattagcaagaagaagaggtggtagtacaatgattggtccacacgactataggaagt 96  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  489 tgaacagtaatgacatggaagaaattagcaagaagaagaggtggtagtacaatgattggtccacacggctataggaagt 411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0419 (Bit Score: 119; Significance: 1e-60; HSPs: 2)
Name: scaffold0419
Description:

Target: scaffold0419; HSP #1
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 185 - 447
Target Start/End: Original strand, 7357 - 7619
Alignment:
Q  185 attctcatggctatgcaatcaccttcctcttccacttcaatttcctatgattacaaataccaagtattcctcagtttcagaggaagtgacactcggtacg 284  Q
    |||||||||||||||||||||||| |||||||| ||||| |||| ||||  | ||  |||||||| ||||| ||||| || || | |||||||||  |||    
T  7357 attctcatggctatgcaatcacctccctcttcctcttcattttcatatgcattcacttaccaagtgttccttagttttaggggcactgacactcgccacg 7456  T
Q  285 gtttcaccgggaatctctacaaggcttttgatgacaagggaatccacaccttcattgacaatcatgaacttcaaagaggggatgaaatcacaccatcact 384  Q
    |||| ||||| ||||||||||||||| ||  ||||||||||||| | |||||||||||  |  |||| ||||||||||| ||||||||||||||||||||    
T  7457 gttttaccggcaatctctacaaggctcttactgacaagggaatcaaaaccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcact 7556  T
Q  385 tctcaaggccattgaagagtctaggatttttattcctgtgttttctatcacctatgcctcttc 447  Q
     ||||||||||| ||||| ||||||||||||||||||||||||||||||| ||| ||| ||||    
T  7557 cctcaaggccatcgaagaatctaggatttttattcctgtgttttctatcaactacgccacttc 7619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0419; HSP #2
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 18 - 96
Target Start/End: Original strand, 7140 - 7218
Alignment:
Q  18 tgaacagtaatgacatggaagaaattagcaagaagaagaggtggtagtacaatgattggtccacacgactataggaagt 96  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  7140 tgaacagtaatgacatggaagaaattagcaagaagaagaggtggtagtacaatgattggtccacacggctataggaagt 7218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0277 (Bit Score: 119; Significance: 1e-60; HSPs: 3)
Name: scaffold0277
Description:

Target: scaffold0277; HSP #1
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 189 - 447
Target Start/End: Complemental strand, 13983 - 13725
Alignment:
Q  189 tcatggctatgcaatcaccttcctcttccacttcaatttcctatgattacaaataccaagtattcctcagtttcagaggaagtgacactcggtacggttt 288  Q
    ||||||||||||||| ||||||||||||| ||||| |||||| ||  | ||  |||||||| ||||||||||| || || | |||||||||  |||||||    
T  13983 tcatggctatgcaattaccttcctcttcctcttcattttcctctgcattcacttaccaagtgttcctcagttttaggggcactgacactcgccacggttt 13884  T
Q  289 caccgggaatctctacaaggcttttgatgacaagggaatccacaccttcattgacaatcatgaacttcaaagaggggatgaaatcacaccatcacttctc 388  Q
     ||||| ||||||||||||||| ||  ||||||||||||| | |||||||||||  |  |||| ||||||||||| |||||||||||||||||||| |||    
T  13883 taccggcaatctctacaaggctcttactgacaagggaatcaaaaccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcctc 13784  T
Q  389 aaggccattgaagagtctaggatttttattcctgtgttttctatcacctatgcctcttc 447  Q
    |||||||| ||||| ||||||||||||||||||||||||||||||| ||| ||| ||||    
T  13783 aaggccatcgaagaatctaggatttttattcctgtgttttctatcaactacgccacttc 13725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0277; HSP #2
Raw Score: 118; E-Value: 5e-60
Query Start/End: Original strand, 185 - 458
Target Start/End: Complemental strand, 5026 - 4753
Alignment:
Q  185 attctcatggctatgcaatcaccttcctcttccacttcaatttcctatgattacaaataccaagtattcctcagtttcagaggaagtgacactcggtacg 284  Q
    ||||| |||||||| |||||||||||||| ||| ||||| |||||||||  | ||  |||||||| ||||||||||| || || | |||||||||  |||    
T  5026 attcttatggctatacaatcaccttcctcatcctcttcattttcctatggattcacttaccaagtgttcctcagttttaggggcattgacactcgccacg 4927  T
Q  285 gtttcaccgggaatctctacaaggcttttgatgacaagggaatccacaccttcattgacaatcatgaacttcaaagaggggatgaaatcacaccatcact 384  Q
    |||| ||||| ||||||||||||||| ||  ||||||||||||| | |||||||||||  |  |||| ||||||||||| ||||||||||||||||| ||    
T  4926 gttttaccggaaatctctacaaggctcttactgacaagggaatcaaaaccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatccct 4827  T
Q  385 tctcaaggccattgaagagtctaggatttttattcctgtgttttctatcacctatgcctcttcttcattttgtt 458  Q
     | |||||||||||| || ||||||||||||||||||||||||||||||  |||||||| |||||| |||||||    
T  4826 ccgcaaggccattgatgaatctaggatttttattcctgtgttttctatcttctatgccttttcttcgttttgtt 4753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0277; HSP #3
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 121 - 175
Target Start/End: Complemental strand, 5142 - 5083
Alignment:
Q  121 ttttctcataagttataaagttacttatcaaagact-----tcacagaccacaaaaactt 175  Q
    |||||||||||||||||||||||| |||||| ||||     |||||||||||||||||||    
T  5142 ttttctcataagttataaagttacctatcaaggactttacatcacagaccacaaaaactt 5083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0038 (Bit Score: 78; Significance: 4e-36; HSPs: 4)
Name: scaffold0038
Description:

Target: scaffold0038; HSP #1
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 251 - 456
Target Start/End: Original strand, 34623 - 34828
Alignment:
Q  251 ttcctcagtttcagaggaagtgacactcggtacggtttcaccgggaatctctacaaggcttttgatgacaagggaatccacaccttcattgacaatcatg 350  Q
    ||||| ||||| ||||| ||||||||||| || ||||| ||||  |||||||| |  ||| ||  | |||||||||||||||||||||||||  |    |    
T  34623 ttccttagttttagaggtagtgacactcgctatggttttaccgaaaatctctatagagctctttgtcacaagggaatccacaccttcattgatgacaggg 34722  T
Q  351 aacttcaaagaggggatgaaatcacaccatcacttctcaaggccattgaagagtctaggatttttattcctgtgttttctatcacctatgcctcttcttc 450  Q
    | |||||| |||| |||||||| |||||||||||| |||||||||||||||||||||||||||| |||||||| || |||||||  ||||| ||||||||    
T  34723 agcttcaaggaggagatgaaataacaccatcacttttcaaggccattgaagagtctaggattttcattcctgtcttgtctatcaattatgcttcttcttc 34822  T
Q  451 attttg 456  Q
    ||||||    
T  34823 attttg 34828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0038; HSP #2
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 251 - 456
Target Start/End: Original strand, 42864 - 43069
Alignment:
Q  251 ttcctcagtttcagaggaagtgacactcggtacggtttcaccgggaatctctacaaggcttttgatgacaagggaatccacaccttcattgacaatcatg 350  Q
    ||||| ||||| ||||| ||||||||||| || ||||| || || ||||||||||| | | ||  | | |||||||| | ||||||||||||  |    |    
T  42864 ttccttagttttagaggtagtgacactcgttatggttttactggaaatctctacaaagatctttgtaagaagggaattcgcaccttcattgatgacagag 42963  T
Q  351 aacttcaaagaggggatgaaatcacaccatcacttctcaaggccattgaagagtctaggatttttattcctgtgttttctatcacctatgcctcttcttc 450  Q
    |||||| | |||| ||  |||| |||||||||||| |||||||||||||||||||||||||||| |||||||| || |||||||  ||||| ||||||||    
T  42964 aacttccaggaggtgacaaaataacaccatcacttttcaaggccattgaagagtctaggattttcattcctgtcttgtctatcaattatgcttcttcttc 43063  T
Q  451 attttg 456  Q
    ||||||    
T  43064 attttg 43069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0038; HSP #3
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 353 - 456
Target Start/End: Original strand, 27448 - 27551
Alignment:
Q  353 cttcaaagaggggatgaaatcacaccatcacttctcaaggccattgaagagtctaggatttttattcctgtgttttctatcacctatgcctcttcttcat 452  Q
    |||||| |||| |||||||| ||| |||||||| |||||| ||||||||| ||||||||||| |||||||| || |||||||  ||||| ||||||||||    
T  27448 cttcaaggaggtgatgaaataacatcatcacttttcaaggtcattgaagaatctaggattttcattcctgtcttgtctatcaattatgcttcttcttcat 27547  T
Q  453 tttg 456  Q
    ||||    
T  27548 tttg 27551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0038; HSP #4
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 353 - 456
Target Start/End: Original strand, 116796 - 116899
Alignment:
Q  353 cttcaaagaggggatgaaatcacaccatcacttctcaaggccattgaagagtctaggatttttattcctgtgttttctatcacctatgcctcttcttcat 452  Q
    |||||| |||| || ||||| ||||| |||||| |||||||||||||||||||||||||||| |||||| | || |||||||  ||||| |||||||| |    
T  116796 cttcaacgaggtgacgaaataacaccgtcacttttcaaggccattgaagagtctaggattttcattcctattttgtctatcaattatgcttcttcttcct 116895  T
Q  453 tttg 456  Q
    ||||    
T  116896 tttg 116899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 59; Significance: 8e-25; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 270 - 456
Target Start/End: Complemental strand, 58552 - 58366
Alignment:
Q  270 gtgacactcggtacggtttcaccgggaatctctacaaggcttttgatgacaagggaatccacaccttcattgacaatcatgaacttcaaagaggggatga 369  Q
    |||||||||| || ||||| || || ||||||||||  ||| ||  ||||||||||||||  |||||||| ||  |    || |||||| |||| || ||    
T  58552 gtgacactcgctatggttttactggaaatctctacagagctctttgtgacaagggaatccgaaccttcatggatgacagagagcttcaaggaggtgacga 58453  T
Q  370 aatcacaccatcacttctcaaggccattgaagagtctaggatttttattcctgtgttttctatcacctatgcctcttcttcattttg 456  Q
    ||| |||||||||||| ||||||||||| |||||||||||||||| ||||| || || ||||||| |||||| ||||||||||||||    
T  58452 aataacaccatcacttttcaaggccattaaagagtctaggattttcattcccgtcttgtctatcaactatgcttcttcttcattttg 58366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 47; Significance: 1e-17; HSPs: 1)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 360 - 458
Target Start/End: Original strand, 3279695 - 3279793
Alignment:
Q  360 gaggggatgaaatcacaccatcacttctcaaggccattgaagagtctaggatttttattcctgtgttttctatcacctatgcctcttcttcattttgtt 458  Q
    |||| ||||||||||||| ||||||| |||||||||| |||||||| | |||||||||||| || || ||||||| |||||| ||||||  ||||||||    
T  3279695 gaggtgatgaaatcacacaatcacttgtcaaggccatcgaagagtccatgatttttattccggtcttctctatcaactatgcttcttctatattttgtt 3279793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 272 - 327
Target Start/End: Original strand, 59492 - 59547
Alignment:
Q  272 gacactcggtacggtttcaccgggaatctctacaaggcttttgatgacaagggaat 327  Q
    ||||||||||||||||||||||| |||||||  |||||| ||  ||||||||||||    
T  59492 gacactcggtacggtttcaccggcaatctcttgaaggctcttattgacaagggaat 59547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 350 - 412
Target Start/End: Original strand, 16689008 - 16689070
Alignment:
Q  350 gaacttcaaagaggggatgaaatcacaccatcacttctcaaggccattgaagagtctaggatt 412  Q
    |||||||| ||||| ||  ||||||||||||||||| ||||||| |||||||| || ||||||    
T  16689008 gaacttcagagaggtgacaaaatcacaccatcacttatcaaggcaattgaagactcaaggatt 16689070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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