View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF5892_low_37 (Length: 278)

Name: NF5892_low_37
Description: NF5892
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF5892_low_37
NF5892_low_37
[»] chr3 (6 HSPs)
chr3 (34-198)||(35687491-35687653)
chr3 (18-183)||(40796152-40796315)
chr3 (18-143)||(1772452-1772577)
chr3 (18-141)||(2487705-2487828)
chr3 (18-79)||(23330074-23330135)
chr3 (110-189)||(39655282-39655359)
[»] chr2 (14 HSPs)
chr2 (18-195)||(38342522-38342696)
chr2 (18-182)||(3547077-3547239)
chr2 (18-145)||(42576523-42576650)
chr2 (18-195)||(43371467-43371639)
chr2 (18-195)||(4427835-4428010)
chr2 (18-143)||(14331438-14331563)
chr2 (18-122)||(26755664-26755766)
chr2 (18-143)||(30978836-30978963)
chr2 (30-143)||(18485573-18485684)
chr2 (18-143)||(6164526-6164656)
chr2 (31-118)||(24051696-24051781)
chr2 (85-143)||(44057860-44057919)
chr2 (18-66)||(44057785-44057833)
chr2 (22-57)||(7314764-7314799)
[»] chr4 (23 HSPs)
chr4 (18-179)||(16216673-16216832)
chr4 (18-207)||(30266322-30266509)
chr4 (18-207)||(30285679-30285866)
chr4 (18-143)||(568333-568458)
chr4 (18-206)||(21544495-21544681)
chr4 (18-189)||(18423506-18423675)
chr4 (18-204)||(29527729-29527912)
chr4 (17-182)||(1866566-1866728)
chr4 (18-207)||(10574411-10574604)
chr4 (18-181)||(45065165-45065326)
chr4 (18-209)||(31782531-31782718)
chr4 (40-195)||(14605929-14606081)
chr4 (18-122)||(41915060-41915164)
chr4 (18-188)||(31415942-31416109)
chr4 (18-120)||(30672879-30672981)
chr4 (18-135)||(11172885-11173002)
chr4 (18-143)||(24637110-24637233)
chr4 (30-195)||(47103661-47103829)
chr4 (18-192)||(15733533-15733697)
chr4 (69-143)||(15132185-15132259)
chr4 (110-198)||(26564839-26564925)
chr4 (110-189)||(6382282-6382359)
chr4 (109-204)||(12825456-12825549)
[»] chr7 (20 HSPs)
chr7 (18-195)||(31425923-31426098)
chr7 (18-189)||(18683889-18684058)
chr7 (18-182)||(32546107-32546269)
chr7 (18-188)||(29157264-29157434)
chr7 (18-198)||(29014952-29015136)
chr7 (18-198)||(30839134-30839312)
chr7 (18-122)||(42908104-42908208)
chr7 (18-180)||(28309408-28309567)
chr7 (30-198)||(27063067-27063231)
chr7 (18-207)||(21750701-21750884)
chr7 (18-143)||(37103180-37103305)
chr7 (18-143)||(43218198-43218323)
chr7 (18-122)||(2471910-2472014)
chr7 (52-195)||(44845138-44845278)
chr7 (57-195)||(22973342-22973478)
chr7 (18-85)||(27062375-27062442)
chr7 (92-189)||(27063323-27063418)
chr7 (150-198)||(2472028-2472076)
chr7 (18-65)||(22962479-22962526)
chr7 (112-189)||(25979926-25980001)
[»] scaffold0013 (2 HSPs)
scaffold0013 (18-198)||(128121-128299)
scaffold0013 (18-188)||(105479-105647)
[»] chr8 (11 HSPs)
chr8 (18-198)||(40789499-40789677)
chr8 (18-189)||(15068597-15068765)
chr8 (30-198)||(2183606-2183771)
chr8 (30-136)||(2189907-2190013)
chr8 (30-140)||(8031062-8031170)
chr8 (32-194)||(10297381-10297542)
chr8 (18-120)||(4594213-4594313)
chr8 (110-204)||(17469257-17469349)
chr8 (70-143)||(14507280-14507350)
chr8 (97-195)||(15173883-15173979)
chr8 (112-204)||(30904050-30904139)
[»] chr1 (14 HSPs)
chr1 (18-194)||(16237308-16237482)
chr1 (50-198)||(35069889-35070035)
chr1 (18-198)||(12718772-12718943)
chr1 (18-143)||(10450112-10450237)
chr1 (18-139)||(37032251-37032372)
chr1 (18-117)||(19003733-19003832)
chr1 (18-122)||(19892886-19892987)
chr1 (100-195)||(23058459-23058552)
chr1 (23-65)||(17516343-17516385)
chr1 (32-85)||(23058319-23058372)
chr1 (150-204)||(16433161-16433215)
chr1 (110-143)||(41477005-41477038)
chr1 (110-189)||(29936419-29936496)
chr1 (18-104)||(48024363-48024445)
[»] chr6 (11 HSPs)
chr6 (18-207)||(29199876-29200063)
chr6 (18-198)||(18908804-18908981)
chr6 (20-187)||(20610993-20611158)
chr6 (18-198)||(9458575-9458751)
chr6 (18-85)||(9458230-9458297)
chr6 (60-181)||(17546919-17547038)
chr6 (110-198)||(256492-256578)
chr6 (110-189)||(32053090-32053167)
chr6 (110-189)||(27738774-27738851)
chr6 (92-189)||(9458842-9458937)
chr6 (110-195)||(14410858-14410941)
[»] chr5 (12 HSPs)
chr5 (18-189)||(23045001-23045169)
chr5 (21-198)||(2681130-2681304)
chr5 (18-198)||(20634091-20634270)
chr5 (18-198)||(20650205-20650384)
chr5 (18-139)||(12915383-12915504)
chr5 (18-143)||(43523671-43523794)
chr5 (81-207)||(12712549-12712673)
chr5 (81-207)||(12773813-12773937)
chr5 (18-143)||(18116560-18116683)
chr5 (19-85)||(10834122-10834188)
chr5 (18-181)||(12250882-12251041)
chr5 (18-143)||(34259171-34259290)
[»] scaffold0059 (1 HSPs)
scaffold0059 (18-180)||(70005-70165)
[»] scaffold0015 (1 HSPs)
scaffold0015 (30-143)||(55950-56063)
[»] scaffold0008 (2 HSPs)
scaffold0008 (18-188)||(67659-67827)
scaffold0008 (18-188)||(75502-75670)
[»] scaffold0005 (1 HSPs)
scaffold0005 (40-195)||(211297-211449)
[»] scaffold0184 (1 HSPs)
scaffold0184 (20-198)||(2881-3057)
[»] scaffold0182 (1 HSPs)
scaffold0182 (18-143)||(16878-17002)
[»] scaffold0036 (1 HSPs)
scaffold0036 (111-195)||(33396-33478)


Alignment Details
Target: chr3 (Bit Score: 114; Significance: 7e-58; HSPs: 6)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 114; E-Value: 7e-58
Query Start/End: Original strand, 34 - 198
Target Start/End: Complemental strand, 35687653 - 35687491
Alignment:
Q  34 caaaccaaataacatgacatatcattatcaacccactcaacaaaaacaaaaatatgacctttgtacattcgggtaaggtttgggtatggatttggggtgg 133  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||| ||||| |||||||||||||| | |    
T  35687653 caaaccaaataacatgacatatcattatcaacccactcaacaaaaacaaaaatatgacatttctacattcgggtagggttttggtatggatttgggatag 35687554  T
Q  134 gtacatatatatgccagttacccgtctcgtatccgtattatgaaatcggagaaaactcaaactca 198  Q
    ||||||  ||||  ||||||||||||||||| ||||||||||||||||| |||||||||||||||    
T  35687553 gtacat--atatcacagttacccgtctcgtacccgtattatgaaatcggggaaaactcaaactca 35687491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 18 - 183
Target Start/End: Complemental strand, 40796315 - 40796152
Alignment:
Q  18 atatcatgatatttatcaaaccaaataacatgacatatcattatcaacccactcaacaaaaacaaaaatatgacctttgtacattcgggtaaggtttggg 117  Q
    ||||||||| | |||||||||||||||||| ||||||||||||||||||| || |||||||| ||||||||||||||| ||||||| |||||||||||||    
T  40796315 atatcatgacaattatcaaaccaaataacaggacatatcattatcaacccccttaacaaaaataaaaatatgacctttctacattccggtaaggtttggg 40796216  T
Q  118 tatggatttggggtgggtacatatatatgccagttacccgtctcgtatccgtattatgaaatcgga 183  Q
    ||||  ||||||||||||||  || ||| |   ||||||||| |||| ||||||| ||||||||||    
T  40796215 tatgactttggggtgggtac--atgtatcctcattacccgtcccgtacccgtattttgaaatcgga 40796152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 18 - 143
Target Start/End: Complemental strand, 1772577 - 1772452
Alignment:
Q  18 atatcatgatatttatcaaaccaaataacatgacatatcattatcaacccactcaacaaaaacaaaaatatgacctttgtacattcgggtaaggtttggg 117  Q
    ||||||||||| ||||||||| |||||||||||||||||||||||||||| || ||||||||||||||||||  |||| |||||||||||| |||||| |    
T  1772577 atatcatgataattatcaaacaaaataacatgacatatcattatcaacccccttaacaaaaacaaaaatatggtctttctacattcgggtagggtttgtg 1772478  T
Q  118 tatggatttggggtgggtacatatat 143  Q
    ||||  || |||||||||||||||||    
T  1772477 tatgagttcggggtgggtacatatat 1772452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 18 - 141
Target Start/End: Original strand, 2487705 - 2487828
Alignment:
Q  18 atatcatgatatttatcaaaccaaataacatgacatatcattatcaacccactcaacaaaaacaaaaatatgacctttgtacattcgggtaaggtttggg 117  Q
    ||||||||| | |||||||||||||||||||| ||||||||||||||||  || |||||||||||||||||||||||| ||||||  |||| ||||||||    
T  2487705 atatcatgacaattatcaaaccaaataacatggcatatcattatcaacctccttaacaaaaacaaaaatatgacctttctacatttaggtagggtttggg 2487804  T
Q  118 tatggatttggggtgggtacatat 141  Q
    ||||| || |||||||||||||||    
T  2487805 tatgggttcggggtgggtacatat 2487828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 18 - 79
Target Start/End: Original strand, 23330074 - 23330135
Alignment:
Q  18 atatcatgatatttatcaaaccaaataacatgacatatcattatcaacccactcaacaaaaa 79  Q
    ||||||||| | |||||||||| ||||||||||||||||||||| ||||| |||||||||||    
T  23330074 atatcatgacaattatcaaaccgaataacatgacatatcattattaaccccctcaacaaaaa 23330135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 110 - 189
Target Start/End: Complemental strand, 39655359 - 39655282
Alignment:
Q  110 ggtttgggtatggatttggggtgggtacatatatatgccagttacccgtctcgtatccgtattatgaaatcggagaaaac 189  Q
    ||||||||||||| |||||||||||||| ||||||  || |||||||||| | || |||| || ||| ||||| ||||||    
T  39655359 ggtttgggtatgggtttggggtgggtacctatata--cctgttacccgtcccatacccgtgttttgagatcggggaaaac 39655282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 103; Significance: 3e-51; HSPs: 14)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 18 - 195
Target Start/End: Complemental strand, 38342696 - 38342522
Alignment:
Q  18 atatcatgatatttatcaaaccaaataacatgacatatcattatcaacccactcaacaaaaacaaaaatatgacctttgtacattcgggtaaggtttggg 117  Q
    ||||||||| | |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| | ||||||| |||||||||||| ||||||||    
T  38342696 atatcatgacaattatcaaaccaaataacatgacatatcattatcaaccc-ctcaacaaaaacaaaaacacgacctttctacattcgggtagggtttggg 38342598  T
Q  118 tatggatttggggtgggtacatatatatgccagttacccgtctcgtatccgtattatgaaatcggagaaaactcaaac 195  Q
    ||||| || |||||||||||||  |||| || |||||||||| |||||||||||| | ||||||| ||||||||||||    
T  38342597 tatgggttcggggtgggtacat--atatccccgttacccgtcccgtatccgtattttaaaatcggggaaaactcaaac 38342522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 18 - 182
Target Start/End: Original strand, 3547077 - 3547239
Alignment:
Q  18 atatcatgatatttatcaaaccaaataacatgacatatcattatcaacccactcaacaaaaacaaaaatatgacctttgtacattcgggtaaggtttggg 117  Q
    ||||||||| | |||||||||||||||||||  ||||||||||||||||| ||||||||||||||||||||||| ||| |||||||||||| |||||||     
T  3547077 atatcatgacaattatcaaaccaaataacatagcatatcattatcaaccccctcaacaaaaacaaaaatatgacatttctacattcgggtagggtttgga 3547176  T
Q  118 tatggatttggggtgggtacatatatatgccagttacccgtctcgtatccgtattatgaaatcgg 182  Q
    ||||| || ||||||||||||||||| |  | |||||||||| |||| ||||||| |||||||||    
T  3547177 tatgggttcggggtgggtacatatatct--ccgttacccgtcccgtacccgtattttgaaatcgg 3547239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 18 - 145
Target Start/End: Original strand, 42576523 - 42576650
Alignment:
Q  18 atatcatgatatttatcaaaccaaataacatgacatatcattatcaacccactcaacaaaaacaaaaatatgacctttgtacattcgggtaaggtttggg 117  Q
    ||||||||| | |||||||||||||||||||||||||||||||||||||  || |||||||||||||||||||||||| |||||||||||| |||||| |    
T  42576523 atatcatgacaattatcaaaccaaataacatgacatatcattatcaacctccttaacaaaaacaaaaatatgacctttctacattcgggtagggtttgtg 42576622  T
Q  118 tatggatttggggtgggtacatatatat 145  Q
    ||||| ||  ||||||||||||||||||    
T  42576623 tatgggttcagggtgggtacatatatat 42576650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 18 - 195
Target Start/End: Original strand, 43371467 - 43371639
Alignment:
Q  18 atatcatgatatttatcaaaccaaataacatgacatatcattatcaacccactcaacaaaaacaaaaatatgacctttgtacattcgggtaaggtttggg 117  Q
    ||||||||| | |||||||||||||||   ||  |||||||| ||||||| ||||||||||||||||||||||| ||| |||||||||||| ||||||||    
T  43371467 atatcatgacaattatcaaaccaaata---tgggatatcattttcaaccccctcaacaaaaacaaaaatatgacatttctacattcgggtagggtttggg 43371563  T
Q  118 tatggatttggggtgggtacatatatatgccagttacccgtctcgtatccgtattatgaaatcggagaaaactcaaac 195  Q
    ||||  ||||||||||||||  |||||| || |||||||||| |||| ||||||| | ||||||| ||||||||||||    
T  43371564 tatgagtttggggtgggtac--atatatccccgttacccgtcccgtacccgtattttaaaatcggggaaaactcaaac 43371639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 18 - 195
Target Start/End: Original strand, 4427835 - 4428010
Alignment:
Q  18 atatcatgatatttatcaaaccaaataacatgacatatcattatcaacccactcaacaaaaacaaaaatatgacctttgtacattcgggtaaggtttggg 117  Q
    ||||||||||| |||||||||||||||||||||||||||||||| ||||| ||||||||||||||||| || |||||| |||||||||||| ||||||||    
T  4427835 atatcatgatagttatcaaaccaaataacatgacatatcattatgaaccccctcaacaaaaacaaaaacataacctttctacattcgggtagggtttggg 4427934  T
Q  118 tatggatttggggtgggtacatatatatgccagttacccgtctcgtatccgtattatgaaatcggagaaaactcaaac 195  Q
    ||||| || | ||||| | |  ||||||  | ||| |||||| | || |||||||||||| |||| |||||| |||||    
T  4427935 tatgggttcgaggtggatcc--atatatcaccgttgcccgtcccttacccgtattatgaagtcggggaaaacccaaac 4428010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 18 - 143
Target Start/End: Original strand, 14331438 - 14331563
Alignment:
Q  18 atatcatgatatttatcaaaccaaataacatgacatatcattatcaacccactcaacaaaaacaaaaatatgacctttgtacattcgggtaaggtttggg 117  Q
    |||||||| || |||||||||||||||||||  |||||||||||  |||| ||||||||||||||||||||||| ||| |||||||||||| ||||||||    
T  14331438 atatcatgttaattatcaaaccaaataacatagcatatcattatataccccctcaacaaaaacaaaaatatgacatttctacattcgggtagggtttggg 14331537  T
Q  118 tatggatttggggtgggtacatatat 143  Q
    ||||| || || ||||||||||||||    
T  14331538 tatgggttcggagtgggtacatatat 14331563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 18 - 122
Target Start/End: Original strand, 26755664 - 26755766
Alignment:
Q  18 atatcatgatatttatcaaaccaaataacatgacatatcattatcaacccactcaacaaaaacaaaaatatgacctttgtacattcgggtaaggtttggg 117  Q
    ||||||||| | |||||||||||||||||||| ||||||||||||||||  ||||||||||| ||||  ||||||||| |||||||||||| ||||||||    
T  26755664 atatcatgacaattatcaaaccaaataacatggcatatcattatcaacctcctcaacaaaaataaaa--atgacctttttacattcgggtagggtttggg 26755761  T
Q  118 tatgg 122  Q
    |||||    
T  26755762 tatgg 26755766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 18 - 143
Target Start/End: Original strand, 30978836 - 30978963
Alignment:
Q  18 atatcatgatatttatcaaaccaaataacatgacatatcattatcaacccactca--acaaaaacaaaaatatgacctttgtacattcgggtaaggtttg 115  Q
    ||||||||| | |||||||||||||||||||||||||| |||||||| || ||||  | ||||| ||||| ||||||||| |||||| ||||| ||||||    
T  30978836 atatcatgacaattatcaaaccaaataacatgacatataattatcaaacccctcataaaaaaaaaaaaaaaatgacctttctacatttgggtagggtttg 30978935  T
Q  116 ggtatggatttggggtgggtacatatat 143  Q
    ||||||| || ||||||| |||||||||    
T  30978936 ggtatgggttcggggtggatacatatat 30978963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 30 - 143
Target Start/End: Original strand, 18485573 - 18485684
Alignment:
Q  30 ttatcaaaccaaataacatgacatatcattatcaacccactcaacaaaaacaaaaatatgacctttgtacattcgggtaaggtttgggtatggatttggg 129  Q
    |||||||||||||||| ||| |||| |||||||||||| || ||  ||||||||||||| |||||| | |||| ||||||||||||||||||| ||  ||    
T  18485573 ttatcaaaccaaataagatggcataccattatcaaccccctaaa--aaaacaaaaatataacctttctgcatttgggtaaggtttgggtatgggttcagg 18485670  T
Q  130 gtgggtacatatat 143  Q
    ||||||||||||||    
T  18485671 gtgggtacatatat 18485684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 18 - 143
Target Start/End: Complemental strand, 6164656 - 6164526
Alignment:
Q  18 atatcatgatatttatcaaaccaaataacatgacatatcattatcaacccactcaacaaaaa-----caaaaatatgacctttgtacattcgggtaaggt 112  Q
    ||||||||| | |||||||| ||||||||||| |||||||||||||||||  ||||||||||      ||||||||||||||| || ||||||||| |||    
T  6164656 atatcatgacaattatcaaatcaaataacatggcatatcattatcaaccccttcaacaaaaaaaaataaaaaatatgacctttctatattcgggtagggt 6164557  T
Q  113 ttgggtatggatttggggtgggtacatatat 143  Q
     | ||||||  || |||||||||||||||||    
T  6164556 ctaggtatgagttcggggtgggtacatatat 6164526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 31 - 118
Target Start/End: Complemental strand, 24051781 - 24051696
Alignment:
Q  31 tatcaaaccaaataacatgacatatcattatcaacccactcaacaaaaacaaaaatatgacctttgtacattcgggtaaggtttgggt 118  Q
    ||||||||||||||| ||| ||||||||||||||||| |||||||| |  ||||| | ||||||| |||||||||||| ||| |||||    
T  24051781 tatcaaaccaaataatatggcatatcattatcaaccccctcaacaaca--aaaaaaacgacctttctacattcgggtagggtatgggt 24051696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 85 - 143
Target Start/End: Original strand, 44057860 - 44057919
Alignment:
Q  85 atatgacctttgtacattcgggtaaggtttgggtatggatt-tggggtgggtacatatat 143  Q
    ||||||||||| |||||||||||| ||||||||||||| ||  |||||||||||||||||    
T  44057860 atatgacctttctacattcgggtagggtttgggtatgggttcgggggtgggtacatatat 44057919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 18 - 66
Target Start/End: Original strand, 44057785 - 44057833
Alignment:
Q  18 atatcatgatatttatcaaaccaaataacatgacatatcattatcaacc 66  Q
    ||||||||| | |||||||||||||||||||  ||||||||||||||||    
T  44057785 atatcatgacaattatcaaaccaaataacatagcatatcattatcaacc 44057833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 22 - 57
Target Start/End: Complemental strand, 7314799 - 7314764
Alignment:
Q  22 catgatatttatcaaaccaaataacatgacatatca 57  Q
    ||||||||||||||||| ||||||||||||||||||    
T  7314799 catgatatttatcaaacaaaataacatgacatatca 7314764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 102; Significance: 1e-50; HSPs: 23)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 18 - 179
Target Start/End: Complemental strand, 16216832 - 16216673
Alignment:
Q  18 atatcatgatatttatcaaaccaaataacatgacatatcattatcaacccactcaacaaaaacaaaaatatgacctttgtacattcgggtaaggtttggg 117  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||| ||| |||||||||||| ||||||||    
T  16216832 atatcatgataattatcaaaccaaataacatgacatatcattatcaaccccctcaacaaaaacaaaaacatgacatttctacattcgggtagggtttggg 16216733  T
Q  118 tatggatttggggtgggtacatatatatgccagttacccgtctcgtatccgtattatgaaat 179  Q
    || || |||||||  ||||||||||| | ||| |||||||||||||||||||||||||||||    
T  16216732 taagggtttggggaaggtacatatatct-cca-ttacccgtctcgtatccgtattatgaaat 16216673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 18 - 207
Target Start/End: Complemental strand, 30266509 - 30266322
Alignment:
Q  18 atatcatgatatttatcaaaccaaataacatgacatatcattatcaacccactcaacaaaaacaaaaatatgacctttgtacattcgggtaaggtttggg 117  Q
    ||||||||||| |||||||||||||||||||| ||||||||||||||||| ||||||||||||||||| | ||||||| ||||||| |||| ||||||||    
T  30266509 atatcatgatagttatcaaaccaaataacatgtcatatcattatcaaccctctcaacaaaaacaaaaacacgacctttctacattcaggtagggtttggg 30266410  T
Q  118 tatggatttggggtgggtacatatatatgccagttacccgtctcgtatccgtattatgaaatcggagaaaactcaaactcaatcaaatcg 207  Q
    ||||| || ||||||| |||  |||||| || ||||||||||  ||| |||||||||||||||||| ||||  ||||| || ||||||||    
T  30266409 tatgggttcggggtggatac--atatatccccgttacccgtcctgtacccgtattatgaaatcggaaaaaaaccaaacccagtcaaatcg 30266322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 18 - 207
Target Start/End: Original strand, 30285679 - 30285866
Alignment:
Q  18 atatcatgatatttatcaaaccaaataacatgacatatcattatcaacccactcaacaaaaacaaaaatatgacctttgtacattcgggtaaggtttggg 117  Q
    ||||||||||| |||||||||||||||||||| ||||||||||||||||| ||||||||||||||||| | ||||||| ||||||| |||| ||||||||    
T  30285679 atatcatgatagttatcaaaccaaataacatgtcatatcattatcaaccctctcaacaaaaacaaaaacacgacctttctacattcaggtagggtttggg 30285778  T
Q  118 tatggatttggggtgggtacatatatatgccagttacccgtctcgtatccgtattatgaaatcggagaaaactcaaactcaatcaaatcg 207  Q
    ||||| || ||||||| |||  |||||| || ||||||||||  ||| |||||||||||||||||| ||||  ||||| || ||||||||    
T  30285779 tatgggttcggggtggatac--atatatccccgttacccgtcctgtacccgtattatgaaatcggaaaaaaaccaaacccagtcaaatcg 30285866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 18 - 143
Target Start/End: Original strand, 568333 - 568458
Alignment:
Q  18 atatcatgatatttatcaaaccaaataacatgacatatcattatcaacccactcaacaaaaacaaaaatatgacctttgtacattcgggtaaggtttggg 117  Q
    ||||||||| | |||||||||||||||||||||||||||| ||||||||| || |||||||||||||||||||||||| |||||||||||||||||||||    
T  568333 atatcatgacaattatcaaaccaaataacatgacatatcactatcaacccccttaacaaaaacaaaaatatgacctttctacattcgggtaaggtttggg 568432  T
Q  118 tatggatttggggtgggtacatatat 143  Q
    ||||| || |||||||||||||||||    
T  568433 tatgggttcggggtgggtacatatat 568458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 18 - 206
Target Start/End: Original strand, 21544495 - 21544681
Alignment:
Q  18 atatcatgatatttatcaaaccaaataacatgacatatcattatcaacccactcaacaaaaacaaaaatatgacctttgtacattcgggtaaggtttggg 117  Q
    ||||||||| | |||||||||||||||||||| ||||||||||||||||| || |||||||||||||||||||||||| ||| |||||||| ||||||||    
T  21544495 atatcatgacaattatcaaaccaaataacatggcatatcattatcaacccccttaacaaaaacaaaaatatgacctttctaccttcgggtagggtttggg 21544594  T
Q  118 tatggatttggggtgggtacatatatatgccagttacccgtctcgtatccgtattatgaaatcggagaaaactcaaactcaatcaaatc 206  Q
    ||||| || |||||||||||  |||||| ||  ||||| ||| |||| ||||||| |||||||||  ||||  ||||| ||||||||||    
T  21544595 tatgggttcggggtgggtac--atatatccccattacctgtcccgtacccgtattttgaaatcgggaaaaatccaaacccaatcaaatc 21544681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 18 - 189
Target Start/End: Original strand, 18423506 - 18423675
Alignment:
Q  18 atatcatgatatttatcaaaccaaataacatgacatatcattatcaacccactcaacaaaaacaaaaatatgacctttgtacattcgggtaaggtttggg 117  Q
    |||||| |||| |||||||||||||||||||||||||||||||||||  | ||||||||||||||||| ||||||||| |||||||||||| ||||| ||    
T  18423506 atatcaagatagttatcaaaccaaataacatgacatatcattatcaattccctcaacaaaaacaaaaacatgacctttctacattcgggtagggtttagg 18423605  T
Q  118 tatggatttggggtgggtacatatatatgccagttacccgtctcgtatccgtattatgaaatcggagaaaac 189  Q
    ||||| || ||| || ||||||||||   |  |||||||||| ||||||||||||||||||| ||| |||||    
T  18423606 tatgggttcgggatgagtacatatatcctc--gttacccgtcccgtatccgtattatgaaattggaaaaaac 18423675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 18 - 204
Target Start/End: Original strand, 29527729 - 29527912
Alignment:
Q  18 atatcatgatatttatcaaaccaaataacatgacatatcattatcaacccactcaacaaaaacaaaaatatgacctttgtacattcgggtaaggtttggg 117  Q
    ||||||||| | |||||||| ||||||||||  ||||||||||||||| | |||||||||||||||| |||||||||| ||||||||| || ||||||||    
T  29527729 atatcatgacaattatcaaatcaaataacatagcatatcattatcaactccctcaacaaaaacaaaa-tatgacctttctacattcggatagggtttggg 29527827  T
Q  118 tatggatttggggtgggtacatatatatgccagttacccgtctcgtatccgtattatgaaatcggagaaaactcaaactcaatcaaa 204  Q
    ||||| || |||||||||||  |||||| || |||||||||| |||| ||||||| ||||||||| |||||| ||||| | ||||||    
T  29527828 tatgggttcggggtgggtac--atatatccccgttacccgtcacgtacccgtattttgaaatcggggaaaacccaaaccctatcaaa 29527912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 17 - 182
Target Start/End: Complemental strand, 1866728 - 1866566
Alignment:
Q  17 aatatcatgatatttatcaaaccaaataacatgacatatcattatcaacccactcaacaaaaacaaaaatatgacctttgtacattcgggtaaggtttgg 116  Q
    |||||||||| | |||||||||||||||||||||||||||||||||||||| || |||||||||||||  ||||||||| ||||||||||||  ||||||    
T  1866728 aatatcatgacaattatcaaaccaaataacatgacatatcattatcaaccccctaaacaaaaacaaaac-atgacctttctacattcgggtagagtttgg 1866630  T
Q  117 gtatggatttggggtgggtacatatatatgccagttacccgtctcgtatccgtattatgaaatcgg 182  Q
    |||||| || ||||||| |||||||||  ||   |||||||||||||| ||||||| |||||||||    
T  1866629 gtatgggttcggggtggatacatatatccgca--ttacccgtctcgtacccgtattttgaaatcgg 1866566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 18 - 207
Target Start/End: Complemental strand, 10574604 - 10574411
Alignment:
Q  18 atatcatgatatttatcaaaccaaataacatgacatatcattatcaacccactcaaca------aaaacaaaaatatgacctttgtacattcgggtaagg 111  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||  |||||||      |||||||||| |||| |||| |||||||||||| ||    
T  10574604 atatcatgatagttatcaaaccaaataacatgacatatcattatcaacctcctcaacacaaataaaaacaaaaacatgatctttctacattcgggtaggg 10574505  T
Q  112 tttgggtatggatttggggtgggtacatatatatgccagttacccgtctcgtatccgtattatgaaatcggagaaaactcaaactcaatcaaatcg 207  Q
    ||||||||||  || |||| ||||||||  |||| || |||||||||| |||| | ||||||||||||||| ||||| |||||| || ||||||||    
T  10574504 tttgggtatgagttcggggcgggtacat--atatccccgttacccgtcccgtacctgtattatgaaatcggggaaaattcaaacccagtcaaatcg 10574411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 18 - 181
Target Start/End: Original strand, 45065165 - 45065326
Alignment:
Q  18 atatcatgatatttatcaaaccaaataacatgacatatcattatcaacccactcaacaaaaacaaaaatatgacctttgtacattcgggtaaggtttggg 117  Q
    ||||||||| | |||||||||||||||||||  ||||||||||||||||| ||||||||||||||||||||||  ||| |||||||||||| ||||||||    
T  45065165 atatcatgacaattatcaaaccaaataacatagcatatcattatcaaccccctcaacaaaaacaaaaatatgatatttctacattcgggtagggtttggg 45065264  T
Q  118 tatggatttggggtgggtacatatatatgccagttacccgtctcgtatccgtattatgaaatcg 181  Q
    ||||  || ||| |||||||  |||||| || ||||| |||| |||| ||||||| ||||||||    
T  45065265 tatgcgttcgggatgggtac--atatatccctgttactcgtcccgtacccgtattttgaaatcg 45065326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 18 - 209
Target Start/End: Original strand, 31782531 - 31782718
Alignment:
Q  18 atatcatgatatttatcaaaccaaataacatgacatatcattatcaacccactcaacaaaaacaaaaatatgacctttgtacattcgggtaaggtttggg 117  Q
    ||||||||| | |||||||||||||||| ||| |||| |||||||||||| || ||  ||||||||||||| |||||| | ||||| |||||||||||||    
T  31782531 atatcatgacaattatcaaaccaaataagatggcataccattatcaaccccctaaa--aaaacaaaaatataacctttctgcattcaggtaaggtttggg 31782628  T
Q  118 tatggatttggggtgggtacatatatatgccagttacccgtctcgtatccgtattatgaaatcggagaaaactcaaactcaatcaaatcgag 209  Q
    ||||  ||||||||||||||  |||||| || |||||| ||  |||| ||||||| ||||||||| |||||| ||||| || ||||||||||    
T  31782629 tatgagtttggggtgggtac--atatatccccgttacctgtaccgtacccgtattttgaaatcggggaaaacccaaacccagtcaaatcgag 31782718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 40 - 195
Target Start/End: Complemental strand, 14606081 - 14605929
Alignment:
Q  40 aaataacatgacatatcattatcaacccactcaacaaaaacaaaaatatgacctttgtacattcgggtaaggtttgggtatggatttggggtgggtacat 139  Q
    |||||||||| ||||||||||||||| | || || ||||||||||||||||| ||| ||||||| ||||  |||||||||||| || |||||||||||||    
T  14606081 aaataacatggcatatcattatcaactccctaaa-aaaaacaaaaatatgacatttctacattcaggtagagtttgggtatgggttcggggtgggtacat 14605983  T
Q  140 atatatgccagttacccgtctcgtatccgtattatgaaatcggagaaaactcaaac 195  Q
      |||| || ||||||||||||||| ||||||| |||||||||||||||| |||||    
T  14605982 --atatccctgttacccgtctcgtacccgtattttgaaatcggagaaaacccaaac 14605929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 18 - 122
Target Start/End: Complemental strand, 41915164 - 41915060
Alignment:
Q  18 atatcatgatatttatcaaaccaaataacatgacatatcattatcaacccactcaacaaaaacaaaaatatgacctttgtacattcgggtaaggtttggg 117  Q
    ||||||||| | |||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||| ||| |||||||| ||| ||||||||    
T  41915164 atatcatgacaattatcaaaccaaataacatggcatatcattatcaaccccctcaacaaaaacaaaaatatgacatttctacattcgtgtagggtttggg 41915065  T
Q  118 tatgg 122  Q
    |||||    
T  41915064 tatgg 41915060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 18 - 188
Target Start/End: Complemental strand, 31416109 - 31415942
Alignment:
Q  18 atatcatgatatttatcaaaccaaataacatgacatatcattatcaacccactcaacaaaaacaaaaatatgacctttgtacattcgggtaaggtttggg 117  Q
    ||||||||| | |||||||||||| ||||||| ||||||||||||||||| ||||||||||| ||||||||||||||| ||||||  |||| |||||| |    
T  31416109 atatcatgacaattatcaaaccaactaacatggcatatcattatcaaccccctcaacaaaaataaaaatatgacctttctacatt-tggtagggtttgag 31416011  T
Q  118 tatggatttggggtgggtacatatatatgccagttacccgtctcgtatccgtattatgaaatcggagaaaa 188  Q
    | ||| || |||||||||||  |||||| || |||| || || |||| ||||||| |||||||||||||||    
T  31416010 tgtgggttcggggtgggtac--atatatccctgttatccatcccgtacccgtattttgaaatcggagaaaa 31415942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 18 - 120
Target Start/End: Original strand, 30672879 - 30672981
Alignment:
Q  18 atatcatgatatttatcaaaccaaataacatgacatatcattatcaacccactcaacaaaaacaaaaatatgacctttgtacattcgggtaaggtttggg 117  Q
    ||||||||| | | |||||||||||||||||| ||||||||||||||||| || |||||||||||||||||||||||| |||||||||||| ||||||||    
T  30672879 atatcatgacaatcatcaaaccaaataacatggcatatcattatcaacccccttaacaaaaacaaaaatatgacctttctacattcgggtagggtttggg 30672978  T
Q  118 tat 120  Q
    |||    
T  30672979 tat 30672981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 18 - 135
Target Start/End: Original strand, 11172885 - 11173002
Alignment:
Q  18 atatcatgatatttatcaaaccaaataacatgacatatcattatcaacccactcaacaaaaacaaaaatatgacctttgtacattcgggtaaggtttggg 117  Q
    ||||||||| | |||||||||||||||||||| ||||||||||||||||  || ||||||||| |||||||||||||| |||||||||| | ||||||||    
T  11172885 atatcatgacaattatcaaaccaaataacatggcatatcattatcaacctccttaacaaaaactaaaatatgacctttctacattcgggaagggtttggg 11172984  T
Q  118 tatggatttggggtgggt 135  Q
    ||||| || |||||||||    
T  11172985 tatgggttcggggtgggt 11173002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 18 - 143
Target Start/End: Original strand, 24637110 - 24637233
Alignment:
Q  18 atatcatgatatttatcaaaccaaataacatgacatatcattatcaacccactcaacaaaaacaaaaatatgacctttgtacattcgggtaaggtttggg 117  Q
    ||||||||| | |||||||||||||||||||| ||||||||||||||||| || || ||||||||||| |||||| || ||||||| |||| ||||||||    
T  24637110 atatcatgacaattatcaaaccaaataacatggcatatcattatcaaccccct-aaaaaaaacaaaaacatgacc-ttctacattcaggtagggtttggg 24637207  T
Q  118 tatggatttggggtgggtacatatat 143  Q
    ||||| |   ||||||| ||||||||    
T  24637208 tatgggtcctgggtgggcacatatat 24637233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 30 - 195
Target Start/End: Original strand, 47103661 - 47103829
Alignment:
Q  30 ttatcaaaccaaataacatgacatatcattatcaacccactc-----aacaaaaacaaaaatatgacctttgtacattcgggtaaggtttgggtatggat 124  Q
    ||||||||||||||||||| ||||||| |||||||| |  |      || ||||| |||||||||  |||  |||||||||||| ||||||||||||| |    
T  47103661 ttatcaaaccaaataacataacatatctttatcaactccttacaaaaaaaaaaaaaaaaaatatggtcttcctacattcgggtagggtttgggtatgggt 47103760  T
Q  125 ttggggtgggtacatatatatgccagttacccgtctcgtatccgtattatgaaatcggagaaaactcaaac 195  Q
    | |||||||||||||||||  ||  |||||||| | |||| ||||||| |||||| || |||||| |||||    
T  47103761 tcggggtgggtacatatatccgc--gttacccgccccgtacccgtattttgaaattggggaaaacccaaac 47103829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 18 - 192
Target Start/End: Complemental strand, 15733697 - 15733533
Alignment:
Q  18 atatcatgatatttatcaaaccaaataacatgacatatcattatcaacccactcaacaaaaacaaaaatatgacctttgtacattcgggtaaggtttggg 117  Q
    ||||||||| | |||||||||||||||||||| ||||||||||||||||| ||        | ||||| ||||| ||| || |||| | || |||||| |    
T  15733697 atatcatgacaattatcaaaccaaataacatggcatatcattatcaaccccct--------aaaaaaaaatgacatttctatattcagctagggtttgag 15733606  T
Q  118 tatggatttggggtgggtacatatatatgccagttacccgtctcgtatccgtattatgaaatcggagaaaactca 192  Q
    || |  || ||||||||||||||||| |  | ||||||||||||||| ||||||| ||||||||  |||||||||    
T  15733605 tacgagttcggggtgggtacatatatct--ccgttacccgtctcgtacccgtattttgaaatcgaggaaaactca 15733533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 69 - 143
Target Start/End: Complemental strand, 15132259 - 15132185
Alignment:
Q  69 ctcaacaaaaacaaaaatatgacctttgtacattcgggtaaggtttgggtatggatttggggtgggtacatatat 143  Q
    ||||||||||||||||||||||| ||| |||||| ||||| |||||  |||||| ||  ||||||| ||||||||    
T  15132259 ctcaacaaaaacaaaaatatgacatttctacatttgggtagggtttatgtatgggttcagggtgggcacatatat 15132185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 110 - 198
Target Start/End: Original strand, 26564839 - 26564925
Alignment:
Q  110 ggtttgggtatggatttggggtgggtacatatatatgccagttacccgtctcgtatccgtattatgaaatcggagaaaactcaaactca 198  Q
    ||||||||||||| || ||||||||||| ||||||  || |||||||||| | || |||  || ||||||||| |||| ||||||||||    
T  26564839 ggtttgggtatggtttcggggtgggtacctatata--cccgttacccgtcccatacccgcgttttgaaatcggggaaagctcaaactca 26564925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 110 - 189
Target Start/End: Complemental strand, 6382359 - 6382282
Alignment:
Q  110 ggtttgggtatggatttggggtgggtacatatatatgccagttacccgtctcgtatccgtattatgaaatcggagaaaac 189  Q
    ||||||||||||| || ||||||||||| ||||||  || |||||||||| | || |||| || ||| ||||||||||||    
T  6382359 ggtttgggtatgggttcggggtgggtacctatata--cccgttacccgtcccatacccgtgttttgagatcggagaaaac 6382282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 109 - 204
Target Start/End: Complemental strand, 12825549 - 12825456
Alignment:
Q  109 aggtttgggtatggatttggggtgggtacatatatatgccagttacccgtctcgtatccgtattatgaaatcggagaaaactcaaactcaatcaaa 204  Q
    |||||||||||| | ||  |||||||||| |||||||  | |||||||||| | || |||| || ||||||||| |||||| |||||||| |||||    
T  12825549 aggtttgggtataggttcagggtgggtacgtatatat--ccgttacccgtcccatacccgtgttttgaaatcggggaaaacccaaactcagtcaaa 12825456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 95; Significance: 2e-46; HSPs: 20)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 18 - 195
Target Start/End: Original strand, 31425923 - 31426098
Alignment:
Q  18 atatcatgatatttatcaaaccaaataacatgacatatcattatcaacccactcaacaaaaacaaaaatatgacctttgtacattcgggtaaggtttggg 117  Q
    ||||||||| | |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||| |||||||||||| ||||||||    
T  31425923 atatcatgacaattatcaaaccaaataacatgacatatcattatcaaccccctcaacaaaaacaaaaacatgacctttctacattcgggtagggtttggg 31426022  T
Q  118 tatggatttggggtgggtacatatatatgccagttacccgtctcgtatccgtattatgaaatcggagaaaactcaaac 195  Q
    ||||  || ||||||| |||  |||||| || |||||||||||| || ||||||| | ||||||| |||||| |||||    
T  31426023 tatgcgttcggggtggatac--atatatccccgttacccgtctcatacccgtatttttaaatcggggaaaacccaaac 31426098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 18 - 189
Target Start/End: Original strand, 18683889 - 18684058
Alignment:
Q  18 atatcatgatatttatcaaaccaaataacatgacatatcattatcaacccactcaacaaaaacaaaaatatgacctttgtacattcgggtaaggtttggg 117  Q
    ||||||||| | |||||||||||||||||||| ||||||||||||||||| || |||||||||||||||||||||| | |||||||||||| ||||||||    
T  18683889 atatcatgacaattatcaaaccaaataacatggcatatcattatcaaccccctaaacaaaaacaaaaatatgacctatctacattcgggtagggtttggg 18683988  T
Q  118 tatggatttggggtgggtacatatatatgccagttacccgtctcgtatccgtattatgaaatcggagaaaac 189  Q
    ||||| || | ||||| |||  |||||| || |||||||||| |||| ||||||| ||||||||| ||||||    
T  18683989 tatgggttcgaggtggatac--atatatccctgttacccgtcccgtacccgtattttgaaatcggggaaaac 18684058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 18 - 182
Target Start/End: Original strand, 32546107 - 32546269
Alignment:
Q  18 atatcatgatatttatcaaaccaaataacatgacatatcattatcaacccactcaacaaaaacaaaaatatgacctttgtacattcgggtaaggtttggg 117  Q
    ||||||||| | |||  ||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||| ||| |||||||||||| ||||||||    
T  32546107 atatcatgacaattaataaaccaaataacatggcatatcattatcaaccccctcaacaaaaacaaaaatatgacatttctacattcgggtagggtttggg 32546206  T
Q  118 tatggatttggggtgggtacatatatatgccagttacccgtctcgtatccgtattatgaaatcgg 182  Q
    ||||| || |||||||||||  |||||| || |||||||||  |||| ||||||| |||||||||    
T  32546207 tatgggttcggggtgggtac--atatatccccgttacccgttccgtacccgtattttgaaatcgg 32546269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 18 - 188
Target Start/End: Original strand, 29157264 - 29157434
Alignment:
Q  18 atatcatgatatttatcaaaccaaataacatgacatatcattatcaacccactcaacaaaaacaaaaatatgacctttgtacattcgggtaaggtttggg 117  Q
    ||||||||||| |||||||||||||||||||||||||| |||| |||||| ||||||||||||||||| ||||||||| ||||| |||||| ||||||||    
T  29157264 atatcatgatagttatcaaaccaaataacatgacatattattaccaaccccctcaacaaaaacaaaaacatgacctttctacatccgggtagggtttggg 29157363  T
Q  118 tatggatttggggtgggtacatatatatgccagttacccgtctcgtatccg--tattatgaaatcggagaaaa 188  Q
    || || ||| |||||| |||  |||||| || |||||||||||| || |||  |||||||||||||| |||||    
T  29157364 tacgggtttagggtggatac--atatatccccgttacccgtctcatacccgtatattatgaaatcggggaaaa 29157434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 18 - 198
Target Start/End: Complemental strand, 29015136 - 29014952
Alignment:
Q  18 atatcatgatatttatcaaaccaaataacatgacatatcattatcaacccactcaacaaaaacaaaaatatgacctttgtacattcgggtaaggtttggg 117  Q
    ||||||||| | |||||||||||||||||||| ||||| ||||||||||| ||||||||||||||||||||||||||| |||| ||||||| |||||| |    
T  29015136 atatcatgacaattatcaaaccaaataacatgccatataattatcaaccccctcaacaaaaacaaaaatatgacctttctacagtcgggtagggtttgag 29015037  T
Q  118 tatggatttggggtgg----gtacatatatatgccagttacccgtctcgtatccgtattatgaaatcggagaaaactcaaactca 198  Q
    ||||| || |||||||     || |||||||| || | || ||||| |||| ||||||| |||||||||  ||||||||||||||    
T  29015036 tatgggttcggggtggatatatatatatatatccccgctatccgtcccgtacccgtattttgaaatcgggaaaaactcaaactca 29014952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 18 - 198
Target Start/End: Complemental strand, 30839312 - 30839134
Alignment:
Q  18 atatcatgatatttatcaaaccaaataacatgacatatcattatcaacccactcaacaaaaacaaaaatatgacctttgtacattcgggtaaggtttggg 117  Q
    ||||||||||| ||||||||||| ||||| || ||||||||||||||||  || |||||||||||||||||||||||| |||||||||||||||||||||    
T  30839312 atatcatgatagttatcaaaccacataacttggcatatcattatcaaccacctaaacaaaaacaaaaatatgacctttctacattcgggtaaggtttggg 30839213  T
Q  118 tatggatttggggtgggtacatatatatgcca-gttacccgtctcgtatccgtattatgaaatcggagaaaactcaaactca 198  Q
     |||  || ||||| | |||||||||   ||| ||||| |||| | || ||||||| ||||||| | |||||||||||||||    
T  30839212 catgagttcggggtagatacatatat---ccacgttactcgtcccatacccgtattttgaaatcagggaaaactcaaactca 30839134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 18 - 122
Target Start/End: Complemental strand, 42908208 - 42908104
Alignment:
Q  18 atatcatgatatttatcaaaccaaataacatgacatatcattatcaacccactcaacaaaaacaaaaatatgacctttgtacattcgggtaaggtttggg 117  Q
    ||||||||| | |||||||||||||||||||| ||||||||||||||||| || |||||||||||||||| ||||||| |||||||||||| ||||||||    
T  42908208 atatcatgacaattatcaaaccaaataacatggcatatcattatcaacccccttaacaaaaacaaaaatacgacctttctacattcgggtagggtttggg 42908109  T
Q  118 tatgg 122  Q
    |||||    
T  42908108 tatgg 42908104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 18 - 180
Target Start/End: Original strand, 28309408 - 28309567
Alignment:
Q  18 atatcatgatatttatcaaaccaaataacatgacatatcattatcaacccactcaacaaaaacaaaaatatgacctttgtacattcgggtaaggtttggg 117  Q
    ||||||||| | ||||||||| |||||||||||||||||||||||||||| ||||| ||||||||||| ||||| ||| |||||||||||| ||||||||    
T  28309408 atatcatgacaattatcaaactaaataacatgacatatcattatcaaccc-ctcaataaaaacaaaaacatgacatttctacattcgggtagggtttggg 28309506  T
Q  118 tatggatttggggtgggtacatatatatgccagttacccgtctcgtatccgtattatgaaatc 180  Q
    ||||  || ||||| | |||  |||||| || |||||||||| |||| ||||||| |||||||    
T  28309507 tatgagttcggggtagatac--atatattcccgttacccgtcccgtacccgtattttgaaatc 28309567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 30 - 198
Target Start/End: Original strand, 27063067 - 27063231
Alignment:
Q  30 ttatcaaaccaaataacatgacatatcattatcaacccactcaacaaaaacaaaaatatgacctttgtacattcgggtaaggtttgggtatggatttggg 129  Q
    |||||||||||||||| |||| |||||||||||||||| || ||  |||||||||||||||| ||| |||||||||||| ||||||||||||  || |||    
T  27063067 ttatcaaaccaaataagatgagatatcattatcaaccccctaaa--aaaacaaaaatatgacttttctacattcgggtagggtttgggtatgagttcggg 27063164  T
Q  130 gtgggtacatatatatgccagttacccgtctcgtatccgtattatgaaatcggagaaaactcaaactca 198  Q
    ||| ||||  |||||| || |||| |||||  ||| ||||||| ||||||||  |||||||||||||||    
T  27063165 gtgagtac--atatatccccgttatccgtcctgtacccgtattttgaaatcgaggaaaactcaaactca 27063231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 18 - 207
Target Start/End: Original strand, 21750701 - 21750884
Alignment:
Q  18 atatcatgatatttatcaaaccaaataacatgacatatcattatcaacccactcaacaaaaacaaaaatatgacctttgtacattcgggtaaggtttggg 117  Q
    ||||||||| | |||||||||||||||||||||||||||||||||||||| |||    |||| ||||| ||||||||| || ||||| ||| ||||||||    
T  21750701 atatcatgacaattatcaaaccaaataacatgacatatcattatcaaccccctc----aaaaaaaaaaaatgacctttctagattcgagtagggtttggg 21750796  T
Q  118 tatggatttggggtgggtacatatatatgccagttacccgtctcgtatccgtattatgaaatcggagaaaactcaaactcaatcaaatcg 207  Q
    ||||  || | |||||||||  |||||| || || ||||||||| |||||||||| |||||||||  |||||  |||| | |||||||||    
T  21750797 tatgagttcgaggtgggtac--atatatccccgtcacccgtctcatatccgtattttgaaatcgggaaaaacctaaacccgatcaaatcg 21750884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 18 - 143
Target Start/End: Complemental strand, 37103305 - 37103180
Alignment:
Q  18 atatcatgatatttatcaaaccaaataacatgacatatcattatcaacccactcaacaaaaacaaaaatatgacctttgtacattcgggtaaggtttggg 117  Q
    ||||||||| | |||||||||||||||||||| ||||||||||||||| |  |||||||||||||||| ||||||||| |||||||||||| |||||||     
T  37103305 atatcatgacaattatcaaaccaaataacatggcatatcattatcaactccgtcaacaaaaacaaaaacatgacctttctacattcgggtagggtttgga 37103206  T
Q  118 tatggatttggggtgggtacatatat 143  Q
    ||||  || ||| ||||| |||||||    
T  37103205 tatgtgttcgggatgggtgcatatat 37103180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 18 - 143
Target Start/End: Original strand, 43218198 - 43218323
Alignment:
Q  18 atatcatgatatttatcaaaccaaataacatgacatatcattatcaacccactcaacaaaaacaaaaatatgacctttgtacattcgggtaaggtttggg 117  Q
    |||| |||||| |||||||||||||||||||| ||||||||||||||| | ||||||||||||||||| | ||||||| |||||| || || ||||||||    
T  43218198 atattatgatagttatcaaaccaaataacatgtcatatcattatcaactccctcaacaaaaacaaaaacacgacctttttacatttggctagggtttggg 43218297  T
Q  118 tatggatttggggtgggtacatatat 143  Q
    ||||  || |||||| ||||||||||    
T  43218298 tatgagttcggggtgagtacatatat 43218323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 18 - 122
Target Start/End: Original strand, 2471910 - 2472014
Alignment:
Q  18 atatcatgatatttatcaaaccaaataacatgacatatcattatcaacccactcaacaaaaacaaaaatatgacctttgtacattcgggtaaggtttggg 117  Q
    ||||||||||| ||||||||||||||||||||| | |||||||||||||| ||||||||||| || || |  |||||| |||||||||||| ||||||||    
T  2471910 atatcatgatagttatcaaaccaaataacatgatacatcattatcaaccccctcaacaaaaataagaacaccacctttctacattcgggtagggtttggg 2472009  T
Q  118 tatgg 122  Q
    |||||    
T  2472010 tatgg 2472014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 52 - 195
Target Start/End: Complemental strand, 44845278 - 44845138
Alignment:
Q  52 atatcattatcaacccactcaacaaaaacaaaaatatgacctttgtacattcgggtaaggtttgggtatggatttggggtgggtacatatatatgccagt 151  Q
    ||||||||||| |||| ||||||||||||||||  ||||||||| |||||||||| | |||||| |||||| || |||||||||  | |||||| |   |    
T  44845278 atatcattatcgaccc-ctcaacaaaaacaaaagcatgacctttctacattcgggcagggtttgtgtatgggttcggggtgggt--aaatatatcctcat 44845182  T
Q  152 tacccgtctcgtatccgtattatgaaatcggagaaaactcaaac 195  Q
    || ||||| |||| ||||||||||||||||| |||||| |||||    
T  44845181 taaccgtcccgtacccgtattatgaaatcggggaaaacccaaac 44845138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 57 - 195
Target Start/End: Original strand, 22973342 - 22973478
Alignment:
Q  57 attatcaacccactcaacaaaaacaaaaatatgacctttgtacattcgggtaaggtttgggtatggatttggggtgggtacatatatatgccagttaccc 156  Q
    ||||||||||  || |||||||||||||||||||| ||| |||||||| ||| ||||||||||||| || | |||||||||  | |||| ||  ||||||    
T  22973342 attatcaacctccttaacaaaaacaaaaatatgacatttctacattcgagtagggtttgggtatgggttcgaggtgggtac--agatatccccattaccc 22973439  T
Q  157 gtctcgtatccgtattatgaaatcggagaaaactcaaac 195  Q
    ||| |||| ||||||| ||||||||  |||||| |||||    
T  22973440 gtcccgtacccgtattttgaaatcgtggaaaacccaaac 22973478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 18 - 85
Target Start/End: Complemental strand, 27062442 - 27062375
Alignment:
Q  18 atatcatgatatttatcaaaccaaataacatgacatatcattatcaacccactcaacaaaaacaaaaa 85  Q
    ||||||| ||| ||||||||||||||||||||| ||||||||||||| || |||||||||||||||||    
T  27062442 atatcataataattatcaaaccaaataacatgatatatcattatcaatcccctcaacaaaaacaaaaa 27062375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 92 - 189
Target Start/End: Original strand, 27063323 - 27063418
Alignment:
Q  92 ctttgtacattcgggtaaggtttgggtatggatttggggtgggtacatatatatgccagttacccgtctcgtatccgtattatgaaatcggagaaaac 189  Q
    |||| |||||||||||| |||| |||||||  || |||||||||||  |||||| || |||||||||| |||| ||||||||| ||||||| ||||||    
T  27063323 ctttctacattcgggtagggttggggtatgagttcggggtgggtac--atatattcccgttacccgtcccgtacccgtattattaaatcggggaaaac 27063418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 150 - 198
Target Start/End: Original strand, 2472028 - 2472076
Alignment:
Q  150 gttacccgtctcgtatccgtattatgaaatcggagaaaactcaaactca 198  Q
    ||||||||||| ||| |||||||||||||||||| ||||||||||||||    
T  2472028 gttacccgtctagtacccgtattatgaaatcggaaaaaactcaaactca 2472076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 18 - 65
Target Start/End: Original strand, 22962479 - 22962526
Alignment:
Q  18 atatcatgatatttatcaaaccaaataacatgacatatcattatcaac 65  Q
    ||||||||| | |||||||| ||||||||||| |||||||||||||||    
T  22962479 atatcatgacaattatcaaatcaaataacatggcatatcattatcaac 22962526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 112 - 189
Target Start/End: Complemental strand, 25980001 - 25979926
Alignment:
Q  112 tttgggtatggatttggggtgggtacatatatatgccagttacccgtctcgtatccgtattatgaaatcggagaaaac 189  Q
    ||||||||||  ||||||||||||||||||||||  | |||||||||||| || | || || ||||||||| ||||||    
T  25980001 tttgggtatgagtttggggtgggtacatatatat--ccgttacccgtctcatacctgtgttttgaaatcggggaaaac 25979926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013 (Bit Score: 94; Significance: 6e-46; HSPs: 2)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 18 - 198
Target Start/End: Complemental strand, 128299 - 128121
Alignment:
Q  18 atatcatgatatttatcaaaccaaataacatgacatatcattatcaacccactcaacaaaaacaaaaatatgacctttgtacattcgggtaaggtttggg 117  Q
    |||||| ||||  ||||||||||||||||||||||||||||| ||||||| ||||||||||| ||||||||||||||| |||||| ||||| ||||||||    
T  128299 atatcaagatagctatcaaaccaaataacatgacatatcattttcaaccccctcaacaaaaataaaaatatgacctttctacatttgggtagggtttggg 128200  T
Q  118 tatggatttggggtgggtacatatatatgccagttacccgtctcgtatccgtattatgaaatcggagaaaactcaaactca 198  Q
    ||||| || |||||||||||||||||   ||  ||||||||| |||| |||||||||||||| ||| ||||| ||||||||    
T  128199 tatgggttcggggtgggtacatatatc--cccattacccgtcccgtacccgtattatgaaattggaaaaaacccaaactca 128121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013; HSP #2
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 18 - 188
Target Start/End: Complemental strand, 105647 - 105479
Alignment:
Q  18 atatcatgatatttatcaaaccaaataacatgacatatcattatcaacccactcaacaaaaacaaaaatatgacctttgtacattcgggtaaggtttggg 117  Q
    |||||| ||||  ||||||||||||||||||||||||||||| ||||||| ||||||||||| ||||| |||||||||  ||||| ||||| ||||||||    
T  105647 atatcaagatagctatcaaaccaaataacatgacatatcattttcaaccccctcaacaaaaataaaaacatgacctttcaacatttgggtagggtttggg 105548  T
Q  118 tatggatttggggtgggtacatatatatgccagttacccgtctcgtatccgtattatgaaatcggagaaaa 188  Q
    ||||| || |||||||||||||  |||| || |||||||||| |||| |||||||| ||||||||| ||||    
T  105547 tatgggttcggggtgggtacat--atatccctgttacccgtcccgtacccgtattaagaaatcggaaaaaa 105479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 94; Significance: 6e-46; HSPs: 11)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 18 - 198
Target Start/End: Original strand, 40789499 - 40789677
Alignment:
Q  18 atatcatgatatttatcaaaccaaataacatgacatatcattatcaacccactcaacaaaaacaaaaatatgacctttgtacattcgggtaaggtttggg 117  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||| ||||||||||||  |||||||    
T  40789499 atatcatgatagttatcaaaccaaataacatgacatatcattatcaaccccctcaacaaaaacaaaaacatgacctttctacattcgggtagagtttggg 40789598  T
Q  118 tatggatttggggtgggtacatatatatgccagttacccgtctcgtatccgtattatgaaatcggagaaaactcaaactca 198  Q
    ||| | || |||||||||||  |||||| || ||||||||||  ||| |  ||||||||||| || |||||| ||||||||    
T  40789599 tataggttcggggtgggtac--atatatccctgttacccgtccagtacctatattatgaaattggggaaaacccaaactca 40789677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 18 - 189
Target Start/End: Complemental strand, 15068765 - 15068597
Alignment:
Q  18 atatcatgatatttatcaaaccaaataacatgacatatcattatcaacccactcaacaaaaacaaaaatatgacctttgtacattcgggtaaggtttggg 117  Q
    ||||||||| | |||||||||||||||||||| ||||||||||||||||| || |||||||| ||||||||||||||| |||||||||||| |||| |||    
T  15068765 atatcatgacaattatcaaaccaaataacatggcatatcattatcaaccccctaaacaaaaataaaaatatgacctttctacattcgggtagggttcggg 15068666  T
Q  118 tatggatttggggtgggtacatatatatgccagttacccgtctcgtatccgtattatgaaatcggagaaaac 189  Q
    ||||| || ||||||| |||||||||   || |||||| ||| |||| ||||||| ||||||||| ||||||    
T  15068665 tatgggttcggggtggatacatatat---cccgttacctgtcccgtacccgtattttgaaatcggggaaaac 15068597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 30 - 198
Target Start/End: Complemental strand, 2183771 - 2183606
Alignment:
Q  30 ttatcaaaccaaataacatgacatatcattatcaacccactcaacaaaaacaaaaatatgacctttgtacattcgggtaaggtttgggtatggatttggg 129  Q
    |||||||||||||||||||| ||||||||||||||||  || |||||||||||||||||||||||| |||||||||||| |||||| |||||  || |||    
T  2183771 ttatcaaaccaaataacatg-catatcattatcaacctccttaacaaaaacaaaaatatgacctttctacattcgggtagggtttgagtatgagttcggg 2183673  T
Q  130 gtgggtacatatatatgccagttacccgtctcgtatccgtattatgaaatcggagaaaactcaaactca 198  Q
    |||||||||||||| | ||| |||||  ||||||| ||||||| |||||||||||||||  ||||||||    
T  2183672 gtgggtacatatatct-cca-ttacctctctcgtacccgtattttgaaatcggagaaaatccaaactca 2183606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 30 - 136
Target Start/End: Complemental strand, 2190013 - 2189907
Alignment:
Q  30 ttatcaaaccaaataacatgacatatcattatcaacccactcaacaaaaacaaaaatatgacctttgtacattcgggtaaggtttgggtatggatttggg 129  Q
    |||||||||||||||||||||||||||||||||||||  || |||||||||||||||||||||||| |||||||||||| |||||| |||||| || |||    
T  2190013 ttatcaaaccaaataacatgacatatcattatcaacctccttaacaaaaacaaaaatatgacctttctacattcgggtagggtttgagtatgggttcggg 2189914  T
Q  130 gtgggta 136  Q
    |||||||    
T  2189913 gtgggta 2189907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 30 - 140
Target Start/End: Original strand, 8031062 - 8031170
Alignment:
Q  30 ttatcaaaccaaataacatgacatatcattatcaacccactcaacaaaaacaaaaatatgacctttgtacattcgggtaaggtttgggtatggatttggg 129  Q
    |||||||||||||||||||| ||||||||||||||||| |||||| |||||||||| |||||| || |||||||||||| ||||||||||||| || | |    
T  8031062 ttatcaaaccaaataacatggcatatcattatcaaccccctcaac-aaaacaaaaacatgacc-ttctacattcgggtagggtttgggtatgggttcgag 8031159  T
Q  130 gtgggtacata 140  Q
    |||||||||||    
T  8031160 gtgggtacata 8031170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 32 - 194
Target Start/End: Original strand, 10297381 - 10297542
Alignment:
Q  32 atcaaaccaaataacatgacatatcattatcaacccactcaacaaaaacaaaaatatgacctttgtacatt-cgggtaaggtttgggtatggatttgggg 130  Q
    |||||||||||||||||| |||||||||||||| || |||||||||||||||| |||||||||| ||||||  ||||| ||||| ||||||| ||  |||    
T  10297381 atcaaaccaaataacatggcatatcattatcaatcccctcaacaaaaacaaaagtatgacctttctacattgggggtagggttttggtatgggttcaggg 10297480  T
Q  131 tgggtacatatatatgccagttacccgtctcgtatccgtattatgaaatcggagaaaactcaaa 194  Q
    | |||||  |||||| || |||||| ||| |||  ||||||| ||||||||| |||||| ||||    
T  10297481 taggtac--atatatccccgttacctgtcccgtccccgtattttgaaatcggggaaaacccaaa 10297542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 18 - 120
Target Start/End: Complemental strand, 4594313 - 4594213
Alignment:
Q  18 atatcatgatatttatcaaaccaaataacatgacatatcattatcaacccactcaacaaaaacaaaaatatgacctttgtacattcgggtaaggtttggg 117  Q
    ||||||||| | |||||||||||||||||||||||||||||||||||||| |||  |||||| ||||| | ||| ||| ||||||| ||||  |||||||    
T  4594313 atatcatgacaattatcaaaccaaataacatgacatatcattatcaaccccctc-gcaaaaa-aaaaacacgacttttctacattcaggtagagtttggg 4594216  T
Q  118 tat 120  Q
    |||    
T  4594215 tat 4594213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 110 - 204
Target Start/End: Original strand, 17469257 - 17469349
Alignment:
Q  110 ggtttgggtatggatttggggtgggtacatatatatgccagttacccgtctcgtatccgtattatgaaatcggagaaaactcaaactcaatcaaa 204  Q
    ||||||||||||| |||||||||||||| ||||||  || |||||||||| | || |||| || ||||||||| |||||| ||||| || |||||    
T  17469257 ggtttgggtatgggtttggggtgggtacctatata--cccgttacccgtcccatacccgtgttttgaaatcggggaaaacccaaacccagtcaaa 17469349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 70 - 143
Target Start/End: Complemental strand, 14507350 - 14507280
Alignment:
Q  70 tcaacaaaaacaaaaatatgacctttgtacattcgggtaaggtttgggtatggatttggggtgggtacatatat 143  Q
    |||||||||||||||||||||| ||| ||||||||||| |||||||||  ||| || ||||||| |||||||||    
T  14507350 tcaacaaaaacaaaaatatgacttttctacattcgggt-aggtttggg--tgggttcggggtggatacatatat 14507280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 97 - 195
Target Start/End: Complemental strand, 15173979 - 15173883
Alignment:
Q  97 tacattcgggtaaggtttgggtatggatttggggtgggtacatatatatgccagttacccgtctcgtatccgtattatgaaatcggagaaaactcaaac 195  Q
    |||||||||||| |||||| |||||  || | ||||| ||||||||| |  || ||||||||| |||| ||||||| |||||||||  |||||||||||    
T  15173979 tacattcgggtacggtttgagtatgagttcgaggtggatacatatatct--catttacccgtcccgtacccgtattttgaaatcgggaaaaactcaaac 15173883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 112 - 204
Target Start/End: Original strand, 30904050 - 30904139
Alignment:
Q  112 tttgggtatggatttggggtgggtacatatatatgccagttacccgtctcgtatccgtattatgaaatcggagaaaactcaaactcaatcaaa 204  Q
    ||||||||||| | |||||||||||| ||||| | ||| |||||||||||||| |||| || ||||||| ||| |||| |||||||| |||||    
T  30904050 tttgggtatgggtatggggtgggtacttatatct-cca-ttacccgtctcgtacccgtgttttgaaatc-gaggaaacccaaactcattcaaa 30904139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 90; Significance: 1e-43; HSPs: 14)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 18 - 194
Target Start/End: Complemental strand, 16237482 - 16237308
Alignment:
Q  18 atatcatgatatttatcaaaccaaataacatgacatatcattatcaacccactcaacaaaaacaaaaatatgacctttgtacattcgggtaaggtttggg 117  Q
    ||||||||| | |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||| |||||||||||| ||||||||    
T  16237482 atatcatgacaattatcaaaccaaataacatgacatatcattatcaaccccctcaacaaaaacaaaaatatgacatttctacattcgggtagggtttggg 16237383  T
Q  118 tatggatttggggtgggtacatatatatgccagttacccgtctcgtatccgtattatgaaatcggagaaaactcaaa 194  Q
    ||||| || |||||  ||||  |||||| |  |||||||||| | || ||||||| ||||||||| |||||| ||||    
T  16237382 tatgggttcggggttagtac--atatatcctcgttacccgtcccttacccgtattttgaaatcggggaaaacccaaa 16237308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 50 - 198
Target Start/End: Complemental strand, 35070035 - 35069889
Alignment:
Q  50 acatatcattatcaacccactcaacaaaaacaaaaatatgacctttgtacattcgggtaaggtttgggtatggatttggggtgggtacatatatatgcca 149  Q
    |||||||||||||||||| |||||||||||||||||||||| |||| |||||||||||| |||||| |||||| || |||||||||||||  |||| ||     
T  35070035 acatatcattatcaaccccctcaacaaaaacaaaaatatgatctttctacattcgggtagggtttgagtatgggttcggggtgggtacat--atatccct 35069938  T
Q  150 gttacccgtctcgtatccgtattatgaaatcggagaaaactcaaactca 198  Q
    ||||||||||| ||| ||||||||||||||||| |||||||||||||||    
T  35069937 gttacccgtcttgtacccgtattatgaaatcggggaaaactcaaactca 35069889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 18 - 198
Target Start/End: Complemental strand, 12718943 - 12718772
Alignment:
Q  18 atatcatgatatttatcaaaccaaataacatgacatatcattatcaacccactcaacaaaaacaaaaatatgacctttgtacattcgggtaaggtttggg 117  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||      ||||||||| |||||| |||| |||||||||    
T  12718943 atatcatgataattatcaaaccaaataacatgacatatcattatcaaccccctcaacaaaaac------atgacctttttacatttgggt-aggtttggg 12718851  T
Q  118 tatggatttggggtgggtacatatatatgccagttacccgtctcgtatccgtattatgaaatcggagaaaactcaaactca 198  Q
    ||||| ||  |||||||||||||||| |  | |||||||||||||||  |||||||||||||||| |||||  ||||||||    
T  12718850 tatgggttcagggtgggtacatatattt--ccgttacccgtctcgtacacgtattatgaaatcggggaaaatccaaactca 12718772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 18 - 143
Target Start/End: Complemental strand, 10450237 - 10450112
Alignment:
Q  18 atatcatgatatttatcaaaccaaataacatgacatatcattatcaacccactcaacaaaaacaaaaatatgacctttgtacattcgggtaaggtttggg 117  Q
    ||||||||| | |||| ||||||||||||||||||||||||||| ||||| ||||||||||||||||| ||||||||| |||||||||||| ||||||||    
T  10450237 atatcatgacaattattaaaccaaataacatgacatatcattataaaccccctcaacaaaaacaaaaacatgacctttctacattcgggtagggtttggg 10450138  T
Q  118 tatggatttggggtgggtacatatat 143  Q
    ||||  || |||||||||||||||||    
T  10450137 tatgagttcggggtgggtacatatat 10450112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 18 - 139
Target Start/End: Original strand, 37032251 - 37032372
Alignment:
Q  18 atatcatgatatttatcaaaccaaataacatgacatatcattatcaacccactcaacaaaaacaaaaatatgacctttgtacattcgggtaaggtttggg 117  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||  |||||||||||||||| ||||||||| |||||||||||   ||||| |    
T  37032251 atatcatgatagttatcaaaccaaataacatgacatatcattatcaaccccatcaacaaaaacaaaaacatgacctttctacattcgggtgtagtttgag 37032350  T
Q  118 tatggatttggggtgggtacat 139  Q
    ||||| || | |||||||||||    
T  37032351 tatgggttcgaggtgggtacat 37032372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 18 - 117
Target Start/End: Complemental strand, 19003832 - 19003733
Alignment:
Q  18 atatcatgatatttatcaaaccaaataacatgacatatcattatcaacccactcaacaaaaacaaaaatatgacctttgtacattcgggtaaggtttggg 117  Q
    ||||||||| | |||||||||||||||||||| ||||||||||||||||| || |||||||||||||||||||||||| |||||||||||| ||||||||    
T  19003832 atatcatgacaattatcaaaccaaataacatggcatatcattatcaaccccctaaacaaaaacaaaaatatgacctttctacattcgggtagggtttggg 19003733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 18 - 122
Target Start/End: Original strand, 19892886 - 19892987
Alignment:
Q  18 atatcatgatatttatcaaaccaaataacatgacatatcattatcaacccactcaacaaaaacaaaaatatgacctttgtacattcgggtaaggtttggg 117  Q
    ||||||||| | |||||||||||||||| ||||||||||||||||||||| ||    ||||||||||||||||  ||| ||||||| |||| ||| ||||    
T  19892886 atatcatgacaattatcaaaccaaataagatgacatatcattatcaaccccct---aaaaaacaaaaatatgagttttctacattcaggtagggtatggg 19892982  T
Q  118 tatgg 122  Q
    |||||    
T  19892983 tatgg 19892987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 100 - 195
Target Start/End: Original strand, 23058459 - 23058552
Alignment:
Q  100 attcgggtaaggtttgggtatggatttggggtgggtacatatatatgccagttacccgtctcgtatccgtattatgaaatcggagaaaactcaaac 195  Q
    ||||||||| ||||||||||||| || ||||||||||| |||||   || |||||||||||||||  || ||| ||||||||||||||||||||||    
T  23058459 attcgggtagggtttgggtatgggttcggggtgggtacctatatc--cccgttacccgtctcgtactcgcattttgaaatcggagaaaactcaaac 23058552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 23 - 65
Target Start/End: Original strand, 17516343 - 17516385
Alignment:
Q  23 atgatatttatcaaaccaaataacatgacatatcattatcaac 65  Q
    |||||| ||||||||||||||||||||||||||||||||||||    
T  17516343 atgatagttatcaaaccaaataacatgacatatcattatcaac 17516385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 32 - 85
Target Start/End: Original strand, 23058319 - 23058372
Alignment:
Q  32 atcaaaccaaataacatgacatatcattatcaacccactcaacaaaaacaaaaa 85  Q
    |||||||||||||||||| ||||||||||| ||||| |||||||| || |||||    
T  23058319 atcaaaccaaataacatgtcatatcattattaaccccctcaacaacaaaaaaaa 23058372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 150 - 204
Target Start/End: Complemental strand, 16433215 - 16433161
Alignment:
Q  150 gttacccgtctcgtatccgtattatgaaatcggagaaaactcaaactcaatcaaa 204  Q
    |||||||||| | || |||| || |||||||||||||||||||||| ||||||||    
T  16433215 gttacccgtcccatacccgtgttttgaaatcggagaaaactcaaacccaatcaaa 16433161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 110 - 143
Target Start/End: Complemental strand, 41477038 - 41477005
Alignment:
Q  110 ggtttgggtatggatttggggtgggtacatatat 143  Q
    |||||||||||||||| |||||||||||||||||    
T  41477038 ggtttgggtatggattcggggtgggtacatatat 41477005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 110 - 189
Target Start/End: Original strand, 29936419 - 29936496
Alignment:
Q  110 ggtttgggtatggatttggggtgggtacatatatatgccagttacccgtctcgtatccgtattatgaaatcggagaaaac 189  Q
    ||||||||||||| || ||||||||||| ||||||  || |||||||||| | || ||||||| ||| ||||| ||||||    
T  29936419 ggtttgggtatgggttcggggtgggtacctatata--cccgttacccgtcccatacccgtattttgagatcggggaaaac 29936496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 18 - 104
Target Start/End: Complemental strand, 48024445 - 48024363
Alignment:
Q  18 atatcatgatatttatcaaaccaaataacatgacatatcattatcaacccactcaacaaaaacaaaaatatgacctttgtacattcg 104  Q
    ||||||||| | |||||||||||| ||| ||| ||||| ||||||||| | |||||||||   ||||| ||||||||| ||||||||    
T  48024445 atatcatgacaattatcaaaccaa-taatatgtcatataattatcaactccctcaacaaa---aaaaacatgacctttctacattcg 48024363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 87; Significance: 9e-42; HSPs: 11)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 18 - 207
Target Start/End: Complemental strand, 29200063 - 29199876
Alignment:
Q  18 atatcatgatatttatcaaaccaaataacatgacatatcattatcaacccactcaacaaaaacaaaaatatgacctttgtacattcgggtaaggtttggg 117  Q
    ||||||||| | |||||||||||||||||||| |||||||||||||| ||  | |||||||||||||||||||||||| ||||||||||||  |||||||    
T  29200063 atatcatgacaattatcaaaccaaataacatggcatatcattatcaatccctttaacaaaaacaaaaatatgacctttctacattcgggtagagtttggg 29199964  T
Q  118 tatggatttggggtgggtacatatatatgccagttacccgtctcgtatccgtattatgaaatcggagaaaactcaaactcaatcaaatcg 207  Q
    ||||| || ||||| | |||  |||||| || |||||||||| |||| ||||||| ||||||||| |||||  ||||| |||||||||||    
T  29199963 tatgggttcggggtagatac--atatatccctgttacccgtcccgtacccgtattttgaaatcggggaaaatccaaacccaatcaaatcg 29199876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 18 - 198
Target Start/End: Original strand, 18908804 - 18908981
Alignment:
Q  18 atatcatgatatttatcaaaccaaataacatgacatatcattatcaacccactcaacaaaaacaaaaatatgacctttgtacattcgggtaaggtttggg 117  Q
    ||||||||| | ||||||| ||||||||||||  |||||||||||| ||| ||||||||||| ||||| ||||||||| |||||||||||| ||||||||    
T  18908804 atatcatgacaattatcaatccaaataacatggtatatcattatcagccccctcaacaaaaa-aaaaacatgacctttttacattcgggtagggtttggg 18908902  T
Q  118 tatggatttggggtgggtacatatatatgccagttacccgtctcgtatccgtattatgaaatcggagaaaactcaaactca 198  Q
    ||||  ||||||||||||||  |||||| |  |||||||||| | |||||||||| ||||||||| |||||| ||||||||    
T  18908903 tatgagtttggggtgggtac--atatatccttgttacccgtcccatatccgtattttgaaatcggggaaaacccaaactca 18908981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 20 - 187
Target Start/End: Complemental strand, 20611158 - 20610993
Alignment:
Q  20 atcatgatatttatcaaaccaaataacatgacatatcattatcaacccactcaacaaaaacaaaaatatgacctttgtacattcgggtaaggtttgggta 119  Q
    ||||||| | || ||||| ||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||| ||||||| |||| ||| ||||||    
T  20611158 atcatgaaaattgtcaaaacaaataacatgacatatcattatcaaccccctcaacaaaaataaaaatatgacctttctacattcaggtagggtctgggta 20611059  T
Q  120 tggatttggggtgggtacatatatatgccagttacccgtctcgtatccgtattatgaaatcggagaaa 187  Q
    | | || ||||||| |||  |||||| || |||||||||| | || ||||||| ||||||||| ||||    
T  20611058 tagtttcggggtggatac--atatattcccgttacccgtcccctacccgtattttgaaatcggggaaa 20610993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 18 - 198
Target Start/End: Original strand, 9458575 - 9458751
Alignment:
Q  18 atatcatgatatttatcaaaccaaataacatgacatatcattatcaacccactcaacaaaaacaaaaatatgacctttgtacattcgggtaaggtttggg 117  Q
    ||||||||| | |||||||||||||||| ||||||||||||||||||||| ||  | ||||||||||||||||| |||  ||||||||||| | ||||||    
T  9458575 atatcatgagaattatcaaaccaaataagatgacatatcattatcaaccccct--aaaaaaacaaaaatatgactttttcacattcgggtaggatttggg 9458672  T
Q  118 tatggatttggggtgggtacatatatatgccagttacccgtctcgtatccgtattatgaaatcggagaaaactcaaactca 198  Q
    ||||  || | |||||||||  |||||| || |||| | ||| |||| ||||||| |||||| || |||| ||||||||||    
T  9458673 tatgagttcgaggtgggtac--atatatccccgttatctgtcccgtacccgtattttgaaattggggaaatctcaaactca 9458751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 18 - 85
Target Start/End: Original strand, 9458230 - 9458297
Alignment:
Q  18 atatcatgatatttatcaaaccaaataacatgacatatcattatcaacccactcaacaaaaacaaaaa 85  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||| || |||||||||||||||||    
T  9458230 atatcatgataattatcaaaccaaataacatgacatatcattatcaatcccctcaacaaaaacaaaaa 9458297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 60 - 181
Target Start/End: Complemental strand, 17547038 - 17546919
Alignment:
Q  60 atcaacccactcaacaaaaacaaaaatatgacctttgtacattcgggtaaggtttgggtatggatttggggtgggtacatatatatgccagttacccgtc 159  Q
    |||||||| ||||||||||| ||||| |||| |||| ||| |||||||| ||||||| ||||  || |||||||||||  || ||| || ||||||  ||    
T  17547038 atcaaccccctcaacaaaaataaaaacatgaactttctacgttcgggtagggtttggatatgagttcggggtgggtac--atgtatccccgttaccgatc 17546941  T
Q  160 tcgtatccgtattatgaaatcg 181  Q
     |||||||||||||||||||||    
T  17546940 ccgtatccgtattatgaaatcg 17546919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 110 - 198
Target Start/End: Complemental strand, 256578 - 256492
Alignment:
Q  110 ggtttgggtatggatttggggtgggtacatatatatgccagttacccgtctcgtatccgtattatgaaatcggagaaaactcaaactca 198  Q
    ||||||||||||| |||||||||||||| |||||  |||  |||||||||||||| || | || ||||||||| |||||||||||||||    
T  256578 ggtttgggtatgggtttggggtgggtacctatat--gcccattacccgtctcgtacccatgttttgaaatcggggaaaactcaaactca 256492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 110 - 189
Target Start/End: Original strand, 32053090 - 32053167
Alignment:
Q  110 ggtttgggtatggatttggggtgggtacatatatatgccagttacccgtctcgtatccgtattatgaaatcggagaaaac 189  Q
    ||||||||||||| |||||||||||||||||||||  || |||||||||| | ||||| | || ||||||||| ||||||    
T  32053090 ggtttgggtatgggtttggggtgggtacatatata--cccgttacccgtcccatatccatgttttgaaatcggggaaaac 32053167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 110 - 189
Target Start/End: Original strand, 27738774 - 27738851
Alignment:
Q  110 ggtttgggtatggatttggggtgggtacatatatatgccagttacccgtctcgtatccgtattatgaaatcggagaaaac 189  Q
    ||||||||||||| || |||||||||||||||||||  | |||||||||| | || |||| || ||||||||| ||||||    
T  27738774 ggtttgggtatgggttcggggtgggtacatatatat--ctgttacccgtcccatacccgtgttttgaaatcggggaaaac 27738851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 92 - 189
Target Start/End: Original strand, 9458842 - 9458937
Alignment:
Q  92 ctttgtacattcgggtaaggtttgggtatggatttggggtgggtacatatatatgccagttacccgtctcgtatccgtattatgaaatcggagaaaac 189  Q
    |||| ||||||||||||  ||||||||||   || |||||||||||  |||||| || ||||||| || |||| ||||||||| ||||||| ||||||    
T  9458842 ctttctacattcgggtagagtttgggtataagttcggggtgggtac--atatattcccgttacccatcccgtacccgtattattaaatcggggaaaac 9458937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 110 - 195
Target Start/End: Complemental strand, 14410941 - 14410858
Alignment:
Q  110 ggtttgggtatggatttggggtgggtacatatatatgccagttacccgtctcgtatccgtattatgaaatcggagaaaactcaaac 195  Q
    ||||||||||||| || ||||||||||| ||||||  || |||||||||| | || |||| || ||||||| | ||||||||||||    
T  14410941 ggtttgggtatgggttcggggtgggtacctatata--cccgttacccgtcccatacccgtgttttgaaatctgggaaaactcaaac 14410858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 85; Significance: 1e-40; HSPs: 12)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 18 - 189
Target Start/End: Complemental strand, 23045169 - 23045001
Alignment:
Q  18 atatcatgatatttatcaaaccaaataacatgacatatcattatcaacccactcaacaaaaacaaaaatatgacctttgtacattcgggtaaggtttggg 117  Q
    ||||||||| | |||||||||||||||| ||||||||||||||||||||| || || ||||||||||||||||||||| |||||||||||| ||||| ||    
T  23045169 atatcatgacaattatcaaaccaaataagatgacatatcattatcaaccccctaaa-aaaaacaaaaatatgacctttctacattcgggtagggttttgg 23045071  T
Q  118 tatggatttggggtgggtacatatatatgccagttacccgtctcgtatccgtattatgaaatcggagaaaac 189  Q
    ||||| || ||||||||||||||||| |  | ||||||| || |||| ||||||| ||||||||| ||||||    
T  23045070 tatgggttcggggtgggtacatatatct--ccgttacccatcccgtacccgtattttgaaatcggggaaaac 23045001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 21 - 198
Target Start/End: Original strand, 2681130 - 2681304
Alignment:
Q  21 tcatgatatttatcaaaccaaataacatgacatatcattatcaacccactcaacaaaaacaaaaatatgacctttgtacattcgggtaaggtttgggtat 120  Q
    |||||| | |||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||| ||||||||| || |||||||||||    
T  2681130 tcatgacaattatcaaaccaaataacatgacatatcattatcaaccc-ctcatcaaaaacaaaaatatgacctttctacattcggatagggtttgggtat 2681228  T
Q  121 ggatttggggtgggtacatatatatgccagttacccgtctcgtatccgtattatgaaatcggagaaaactcaaactca 198  Q
    || || ||||||| |||    |||| ||  |||||| || |||| | ||||| ||||||||| |||||| ||||||||    
T  2681229 gggttcggggtggatac--tcatatccccattacccatcccgtacctgtattttgaaatcggggaaaacccaaactca 2681304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 18 - 198
Target Start/End: Original strand, 20634091 - 20634270
Alignment:
Q  18 atatcatgatatttatcaaaccaaataacatgacatatcattatcaacccactcaacaaaaacaaaaatatgacctttgtacattcgggtaaggttt-gg 116  Q
    ||||||||| | |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||| ||| || ||| ||||| ||||| ||    
T  20634091 atatcatgacaattatcaaaccaaataacatgacatatcattatcaaccccctcaacaaaaacaaaaacatgacatttctatatttgggtagggttttgg 20634190  T
Q  117 gtatggatttggggtgggtacatatatatgccagttacccgtctcgtatccgtattatgaaatcggagaaaactcaaactca 198  Q
    |||||| || |||||| || |||||||   ||  ||||||||||| |||||||||| | |||| || ||||||| |||||||    
T  20634191 gtatgggttcggggtgagtgcatatatc--cctattacccgtctcatatccgtattttaaaattggggaaaactgaaactca 20634270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 18 - 198
Target Start/End: Original strand, 20650205 - 20650384
Alignment:
Q  18 atatcatgatatttatcaaaccaaataacatgacatatcattatcaacccactcaacaaaaacaaaaatatgacctttgtacattcgggtaaggttt-gg 116  Q
    ||||||||| | |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||| ||| || ||| ||||| ||||| ||    
T  20650205 atatcatgacaattatcaaaccaaataacatgacatatcattatcaaccccctcaacaaaaacaaaaacatgacatttctatatttgggtagggttttgg 20650304  T
Q  117 gtatggatttggggtgggtacatatatatgccagttacccgtctcgtatccgtattatgaaatcggagaaaactcaaactca 198  Q
    |||||| || |||||| || |||||||   ||  ||||||||||| |||||||||| | |||| || ||||||| |||||||    
T  20650305 gtatgggttcggggtgagtgcatatatc--cctattacccgtctcatatccgtattttaaaattggggaaaactgaaactca 20650384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 18 - 139
Target Start/End: Original strand, 12915383 - 12915504
Alignment:
Q  18 atatcatgatatttatcaaaccaaataacatgacatatcattatcaacccactcaacaaaaacaaaaatatgacctttgtacattcgggtaaggtttggg 117  Q
    ||||||||| | | |||||||||||||||||||||||||||||||||||| |||||||||||| |||| |||| |||| |||||||||||| ||||||||    
T  12915383 atatcatgacaatcatcaaaccaaataacatgacatatcattatcaaccccctcaacaaaaacgaaaacatgatctttctacattcgggtagggtttggg 12915482  T
Q  118 tatggatttggggtgggtacat 139  Q
    ||||| || || ||||||||||    
T  12915483 tatggcttcggagtgggtacat 12915504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 18 - 143
Target Start/End: Original strand, 43523671 - 43523794
Alignment:
Q  18 atatcatgatatttatcaaaccaaataacatgacatatcattatcaacccactcaacaaaaacaaaaatatgacctttgtacattcgggtaaggtttggg 117  Q
    ||||||||| | ||||||| ||||||||||||  |||||||||||||||| |||||||| ||  |||||||||||||| |||||||||||| ||||||||    
T  43523671 atatcatgaaaattatcaatccaaataacatggtatatcattatcaaccccctcaacaacaa--aaaatatgacctttttacattcgggtagggtttggg 43523768  T
Q  118 tatggatttggggtgggtacatatat 143  Q
    ||||  || ||||||| |||||||||    
T  43523769 tatgagttcggggtggatacatatat 43523794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 81 - 207
Target Start/End: Complemental strand, 12712673 - 12712549
Alignment:
Q  81 aaaaatatgacctttgtacattcgggtaaggtttgggtatggatttggggtgggtacatatatatgccagttacccgtctcgtatccgtattatgaaatc 180  Q
    ||||||||||| ||| |||||||||||| ||||||||||||| || | ||||||||||||||| |  | |||| ||||| |||| ||||||| |||||||    
T  12712673 aaaaatatgacatttctacattcgggtagggtttgggtatgggttcgaggtgggtacatatatct--ccgttatccgtcccgtacccgtattttgaaatc 12712576  T
Q  181 ggagaaaactcaaactcaatcaaatcg 207  Q
    ||||||||| |||||||| ||||||||    
T  12712575 ggagaaaacccaaactcagtcaaatcg 12712549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 81 - 207
Target Start/End: Complemental strand, 12773937 - 12773813
Alignment:
Q  81 aaaaatatgacctttgtacattcgggtaaggtttgggtatggatttggggtgggtacatatatatgccagttacccgtctcgtatccgtattatgaaatc 180  Q
    ||||||||||| ||| |||||||||||| |||||| |||||| || | ||||||||||||||| | |  |||| ||||| |||| ||||||| |||||||    
T  12773937 aaaaatatgacatttctacattcgggtagggtttgagtatgggttcgaggtgggtacatatatctcc--gttatccgtcccgtacccgtattttgaaatc 12773840  T
Q  181 ggagaaaactcaaactcaatcaaatcg 207  Q
    ||||||||| |||||||||||||||||    
T  12773839 ggagaaaacccaaactcaatcaaatcg 12773813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 18 - 143
Target Start/End: Complemental strand, 18116683 - 18116560
Alignment:
Q  18 atatcatgatatttatcaaaccaaataacatgacatatcattatcaacccactcaacaaaaacaaaaatatgacctttgtacattcgggtaaggtttggg 117  Q
    ||||||||| | ||||||| |||| |||||||  |||||||||||||||| |||||||| || ||||||||||||||| |||||||||||| ||||||||    
T  18116683 atatcatgagaattatcaatccaa-taacatggtatatcattatcaaccccctcaacaacaa-aaaaatatgacctttttacattcgggtagggtttggg 18116586  T
Q  118 tatggatttggggtgggtacatatat 143  Q
    ||||  || ||||||| |||||||||    
T  18116585 tatgagttcggggtggatacatatat 18116560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 19 - 85
Target Start/End: Original strand, 10834122 - 10834188
Alignment:
Q  19 tatcatgatatttatcaaaccaaataacatgacatatcattatcaacccactcaacaaaaacaaaaa 85  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||| || ||||||||||||||    
T  10834122 tatcatgatagttatcaaaccaaataacatgacatatcattatcaacccccttaacaaaaacaaaaa 10834188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 18 - 181
Target Start/End: Original strand, 12250882 - 12251041
Alignment:
Q  18 atatcatgatatttatcaaaccaaataacatgacatatcattatcaacccactcaacaaaaacaaaaatatgacctttgtacattcgggtaaggtttggg 117  Q
    ||||||||| | |||||||||||||||| ||| |||||||||||||| || ||||||||||| | ||| || |||||| ||||||| |||| ||||||||    
T  12250882 atatcatgacaattatcaaaccaaataatatggcatatcattatcaatcccctcaacaaaaa-ataaacat-acctttctacattcaggtagggtttggg 12250979  T
Q  118 tatggatttggggtgggtacatatatatgccagttacccgtctcgtatccgtattatgaaatcg 181  Q
    ||||| ||  | |||||||||||||| |  | ||||||||||  ||| ||||||| ||||||||    
T  12250980 tatgggttcagagtgggtacatatatct--ctgttacccgtccggtacccgtattttgaaatcg 12251041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 18 - 143
Target Start/End: Original strand, 34259171 - 34259290
Alignment:
Q  18 atatcatgatatttatcaaaccaaataacatgacatatcattatcaacccactcaacaaaaacaaaaatatgacctttgtacattcgggtaaggtttggg 117  Q
    ||||||||| | ||||||||||||||||||||||||||||||||||| || |||      |||||||||||||| ||| |||||||||| | |||||||     
T  34259171 atatcatgacaattatcaaaccaaataacatgacatatcattatcaatcccctc------aacaaaaatatgacttttctacattcggggagggtttgga 34259264  T
Q  118 tatggatttggggtgggtacatatat 143  Q
    ||| | ||  ||||||||||||||||    
T  34259265 tataggttcagggtgggtacatatat 34259290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0059 (Bit Score: 84; Significance: 6e-40; HSPs: 1)
Name: scaffold0059
Description:

Target: scaffold0059; HSP #1
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 18 - 180
Target Start/End: Original strand, 70005 - 70165
Alignment:
Q  18 atatcatgatatttatcaaaccaaataacatgacatatcattatcaacccactcaacaaaaacaaaaatatgacctttgtacattcgggtaaggtttggg 117  Q
    |||||| ||||  ||||||||||||||||||||||||||||| ||||||| ||||||||||| ||||| |||||||||  ||||| ||||| ||||||||    
T  70005 atatcaagatagctatcaaaccaaataacatgacatatcattttcaaccccctcaacaaaaataaaaacatgacctttcaacatttgggtagggtttggg 70104  T
Q  118 tatggatttggggtgggtacatatatatgccagttacccgtctcgtatccgtattatgaaatc 180  Q
    ||||| ||||||||||||||||||||   |  |||||||||| |||| |||||||||||||||    
T  70105 tatgggtttggggtgggtacatatatcctc--gttacccgtcccgtacccgtattatgaaatc 70165  T

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Target: scaffold0015 (Bit Score: 82; Significance: 9e-39; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 30 - 143
Target Start/End: Complemental strand, 56063 - 55950
Alignment:
Q  30 ttatcaaaccaaataacatgacatatcattatcaacccactcaacaaaaacaaaaatatgacctttgtacattcgggtaaggtttgggtatggatttggg 129  Q
    ||||||||||||||||||||  |||||||||| ||||| |||||||||||||||||||||| |||| |||||||||||| |||||||||||||||| |||    
T  56063 ttatcaaaccaaataacatggaatatcattatgaaccccctcaacaaaaacaaaaatatgatctttctacattcgggtagggtttgggtatggattcggg 55964  T
Q  130 gtgggtacatatat 143  Q
    ||||||||||||||    
T  55963 gtgggtacatatat 55950  T

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Target: scaffold0008 (Bit Score: 76; Significance: 3e-35; HSPs: 2)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 18 - 188
Target Start/End: Original strand, 67659 - 67827
Alignment:
Q  18 atatcatgatatttatcaaaccaaataacatgacatatcattatcaacccactcaacaaaaacaaaaatatgacctttgtacattcgggtaaggtttggg 117  Q
    ||||||||| | |||||||| ||||||||||  ||||||||||| ||||| ||||||||||||||||||||||||||| ||||||| |||| ||||||||    
T  67659 atatcatgacaattatcaaatcaaataacatagcatatcattattaaccccctcaacaaaaacaaaaatatgacctttctacattcaggtagggtttggg 67758  T
Q  118 tatggatttggggtgggtacatatatatgccagttacccgtctcgtatccgtattatgaaatcggagaaaa 188  Q
    ||| |  | |||||||||||  |||||| || |||| ||||| |||||||||||| | ||||||| |||||    
T  67759 tataggctcggggtgggtac--atatatccccgttatccgtcccgtatccgtattttaaaatcggggaaaa 67827  T

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Target: scaffold0008; HSP #2
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 18 - 188
Target Start/End: Original strand, 75502 - 75670
Alignment:
Q  18 atatcatgatatttatcaaaccaaataacatgacatatcattatcaacccactcaacaaaaacaaaaatatgacctttgtacattcgggtaaggtttggg 117  Q
    ||||||||| | |||||||| ||||||||||  ||||||||||| ||||| ||||||||||||||||||||||||||| ||||||| |||| ||||||||    
T  75502 atatcatgacaattatcaaatcaaataacatagcatatcattattaaccccctcaacaaaaacaaaaatatgacctttctacattcaggtagggtttggg 75601  T
Q  118 tatggatttggggtgggtacatatatatgccagttacccgtctcgtatccgtattatgaaatcggagaaaa 188  Q
    ||| |  | |||||||||||  |||||| || |||| ||||| |||||||||||| | ||||||| |||||    
T  75602 tataggctcggggtgggtac--atatatccccgttatccgtcccgtatccgtattttaaaatcggggaaaa 75670  T

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Target: scaffold0005 (Bit Score: 73; Significance: 2e-33; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 40 - 195
Target Start/End: Original strand, 211297 - 211449
Alignment:
Q  40 aaataacatgacatatcattatcaacccactcaacaaaaacaaaaatatgacctttgtacattcgggtaaggtttgggtatggatttggggtgggtacat 139  Q
    |||||||||| ||||||||||||||| | || || ||||||||||||||||| ||| ||||||| ||||  |||||||||||| || |||||||||||      
T  211297 aaataacatggcatatcattatcaactccctaaa-aaaaacaaaaatatgacatttctacattcaggtagagtttgggtatgggttcggggtgggtac-- 211393  T
Q  140 atatatgccagttacccgtctcgtatccgtattatgaaatcggagaaaactcaaac 195  Q
    |||||| || ||||||||||||||| ||||||| |||||||||||||||| |||||    
T  211394 atatatccctgttacccgtctcgtacccgtattttgaaatcggagaaaacccaaac 211449  T

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Target: scaffold0184 (Bit Score: 68; Significance: 2e-30; HSPs: 1)
Name: scaffold0184
Description:

Target: scaffold0184; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 20 - 198
Target Start/End: Original strand, 2881 - 3057
Alignment:
Q  20 atcatgatatttatcaaaccaaataacatgacatatcattatcaacccactcaacaaaaacaaaaatatgacctttgtacattcgggtaaggtttgggta 119  Q
    ||||||| | |||||||| ||||||||||| ||||| ||||||||||  || |||||||||||| |  |||| ||| |||||||||||| |||||| |||    
T  2881 atcatgacaattatcaaatcaaataacatggcatataattatcaacctcctaaacaaaaacaaacaagtgacatttctacattcgggtagggtttgagta 2980  T
Q  120 tggatttggggtgggtacatatatatgccagttacccgtctcgtatccgtattatgaaatcggagaaaactcaaactca 198  Q
    ||| || |||||||||||  |||||| ||||||| |||||  ||| ||||||| ||||||||| |||||| ||||||||    
T  2981 tgggttcggggtgggtac--atatatcccagttatccgtcctgtacccgtattttgaaatcggggaaaacccaaactca 3057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0182 (Bit Score: 66; Significance: 3e-29; HSPs: 1)
Name: scaffold0182
Description:

Target: scaffold0182; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 18 - 143
Target Start/End: Original strand, 16878 - 17002
Alignment:
Q  18 atatcatgatatttatcaaaccaaataacatgacatatcattatcaacccactcaacaaaaacaaaaatatgacctttgtacattcgggtaaggtttggg 117  Q
    ||||||||||| |||||||||||||||||||| |||||||||||||| || ||||| ||||| ||||| ||||||||| || ||||||||| |||||||     
T  16878 atatcatgataattatcaaaccaaataacatggcatatcattatcaatcccctcaataaaaa-aaaaaaatgacctttctagattcgggtatggtttgga 16976  T
Q  118 tatggatttggggtgggtacatatat 143  Q
    ||||  || |||||||||||||||||    
T  16977 tatgagttcggggtgggtacatatat 17002  T

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Target: scaffold0036 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 111 - 195
Target Start/End: Original strand, 33396 - 33478
Alignment:
Q  111 gtttgggtatggatttggggtgggtacatatatatgccagttacccgtctcgtatccgtattatgaaatcggagaaaactcaaac 195  Q
    |||||||||||| || ||||||||||||||||||  || |||||||||| | || |||| || ||||||||| |||||| |||||    
T  33396 gtttgggtatgggttcggggtgggtacatatata--cccgttacccgtcccatacccgtgttttgaaatcggggaaaacccaaac 33478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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