View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5893-Insertion-3 (Length: 328)
Name: NF5893-Insertion-3
Description: NF5893
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5893-Insertion-3 |
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Alignment Details
Target: chr7 (Bit Score: 272; Significance: 1e-152; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 272; E-Value: 1e-152
Query Start/End: Original strand, 9 - 319
Target Start/End: Complemental strand, 46287816 - 46287503
Alignment:
| Q |
9 |
aaggaaactattgatgtagtggaattcattttgtttcttggttgtacgatgatatttatgtcttagggtaacatcggtggaagaaaaattagggagaaga |
108 |
Q |
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| T |
46287816 |
aaggaaactattgatgtagtggaattcattttgtttcttggttgtacgatgatatttatgtcttagggtaacatcggtgaaagaaaaattagggagaaga |
46287717 |
T |
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| Q |
109 |
aaactatttgagaggctgtgggttttccaaaactggaactattaaatttggggttgaatttttattatctttatatgtagtcatgacatgacatctatgt |
208 |
Q |
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| T |
46287716 |
aaactatttgagaggttgtgggttttccaaaactggaactattaaatttggggttgaatttttattatctttatatgtagtcatgacatgacatctatgt |
46287617 |
T |
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| Q |
209 |
tggcaagtagccagggtaatttgcacattccagccagctatattaaattggtaatttgatttataat---aatagccatctttaactatggatggttaaa |
305 |
Q |
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| T |
46287616 |
tggcaagtagccagggtaatttgcacattccagccaactatattaaattggtaatttgatttataataataatagccatctttaacgttggatggttaaa |
46287517 |
T |
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| Q |
306 |
tatggagcaaatag |
319 |
Q |
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| T |
46287516 |
tattgaacaaatag |
46287503 |
T |
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