View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5896-Insertion-6 (Length: 240)
Name: NF5896-Insertion-6
Description: NF5896
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5896-Insertion-6 |
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| [»] chr4 (1 HSPs) |
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Alignment Details
Target: chr4 (Bit Score: 230; Significance: 1e-127; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 230; E-Value: 1e-127
Query Start/End: Original strand, 7 - 240
Target Start/End: Original strand, 24275848 - 24276081
Alignment:
| Q |
7 |
cagtggggactcatcacttccttatgattcgttactccagccatcaacggacttaactcactccaacaaattcaacatcaacggttctgattcaaatcaa |
106 |
Q |
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| T |
24275848 |
cagtggggactcatcacttccttatgattcgttactccagccatcaacggacttaactcactccaacaaattcaacatcaacggttctgattcaaatcaa |
24275947 |
T |
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| Q |
107 |
gagattctgatttctcctgattttggatctcatacatatactactccacctcctcattccatcgagccacaacagctgcaagggaaggaagacgatctct |
206 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |
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| T |
24275948 |
gagattctgatttctcctgattttggatctcatacatatactactccacctcctcattccgtcgagccacaacagctgcaagggaaggaagacgatctct |
24276047 |
T |
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| Q |
207 |
ttgatgagctaacccaacaacatatgcatatggt |
240 |
Q |
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| T |
24276048 |
ttgatgagctaacccaacaacatatgcatatggt |
24276081 |
T |
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