View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5899-Insertion-11 (Length: 140)
Name: NF5899-Insertion-11
Description: NF5899
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5899-Insertion-11 |
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| [»] chr2 (1 HSPs) |
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Alignment Details
Target: chr2 (Bit Score: 104; Significance: 3e-52; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 104; E-Value: 3e-52
Query Start/End: Original strand, 17 - 140
Target Start/End: Original strand, 9426378 - 9426496
Alignment:
| Q |
17 |
taataatgtttggtcaacttcgcttcattttccattccaagctaagtggctcatttatcttatccatcatttttgaaattcaatgttatcgtgttcacac |
116 |
Q |
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| T |
9426378 |
taataatgtttggtcaacttcgcttcattttccattccaag-----tggctcatttatcttatccatcatttttgaaattcaatgttatcgtgttcacac |
9426472 |
T |
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| Q |
117 |
ttttgttccaatttccataagtat |
140 |
Q |
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| T |
9426473 |
ttttgttccaatttccataagtat |
9426496 |
T |
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