View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF5899-Insertion-3 (Length: 803)

Name: NF5899-Insertion-3
Description: NF5899
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF5899-Insertion-3
NF5899-Insertion-3
[»] chr4 (46 HSPs)
chr4 (353-802)||(48648698-48649136)
chr4 (7-358)||(48649216-48649573)
chr4 (7-63)||(44257746-44257802)
chr4 (7-63)||(39158104-39158160)
chr4 (7-63)||(47288081-47288137)
chr4 (7-62)||(3078924-3078979)
chr4 (9-63)||(21392569-21392623)
chr4 (7-64)||(9472530-9472586)
chr4 (7-63)||(49584993-49585049)
chr4 (7-62)||(149501-149556)
chr4 (7-62)||(31469005-31469060)
chr4 (7-62)||(36123476-36123531)
chr4 (7-62)||(39881047-39881101)
chr4 (9-56)||(40308447-40308493)
chr4 (9-64)||(47015005-47015060)
chr4 (7-62)||(55996422-55996476)
chr4 (7-64)||(15522352-15522409)
chr4 (13-62)||(28203392-28203440)
chr4 (7-64)||(31559536-31559593)
chr4 (7-64)||(32696805-32696862)
chr4 (7-64)||(54801504-54801560)
chr4 (7-64)||(56474780-56474837)
chr4 (7-63)||(1562553-1562608)
chr4 (7-63)||(37514148-37514204)
chr4 (7-63)||(40348793-40348848)
chr4 (7-63)||(42815403-42815459)
chr4 (7-62)||(149304-149358)
chr4 (7-62)||(2738284-2738339)
chr4 (7-54)||(15985265-15985312)
chr4 (7-62)||(40335789-40335843)
chr4 (7-62)||(40721981-40722035)
chr4 (8-63)||(44170637-44170691)
chr4 (7-61)||(336824-336877)
chr4 (9-63)||(51389315-51389368)
chr4 (7-64)||(4577555-4577611)
chr4 (7-63)||(11546917-11546974)
chr4 (7-64)||(29227259-29227316)
chr4 (9-62)||(30866353-30866405)
chr4 (7-56)||(33484125-33484173)
chr4 (7-56)||(38519799-38519848)
chr4 (7-64)||(40755919-40755975)
chr4 (9-54)||(43759170-43759214)
chr4 (32-69)||(50980595-50980632)
chr4 (7-64)||(51107458-51107514)
chr4 (7-56)||(52263895-52263944)
chr4 (9-62)||(52379053-52379106)
[»] chr5 (36 HSPs)
chr5 (7-64)||(6940166-6940223)
chr5 (7-63)||(6758807-6758863)
chr5 (7-62)||(22098255-22098310)
chr5 (7-62)||(26686881-26686936)
chr5 (7-62)||(26956612-26956667)
chr5 (7-56)||(14321971-14322020)
chr5 (7-64)||(18695316-18695373)
chr5 (7-63)||(1293102-1293158)
chr5 (7-63)||(34379452-34379508)
chr5 (11-62)||(29687081-29687132)
chr5 (7-62)||(40829414-40829469)
chr5 (8-62)||(36416080-36416133)
chr5 (7-64)||(884439-884496)
chr5 (11-64)||(29402180-29402232)
chr5 (9-62)||(38293377-38293430)
chr5 (7-56)||(39195723-39195772)
chr5 (7-63)||(7076585-7076640)
chr5 (11-63)||(14011316-14011368)
chr5 (7-63)||(19840002-19840058)
chr5 (7-67)||(27005496-27005555)
chr5 (7-63)||(32912037-32912093)
chr5 (8-64)||(33191544-33191600)
chr5 (7-63)||(38493624-38493679)
chr5 (9-64)||(4088441-4088496)
chr5 (7-62)||(6529019-6529073)
chr5 (8-63)||(21012567-21012622)
chr5 (13-56)||(35098626-35098669)
chr5 (9-63)||(372402-372456)
chr5 (7-65)||(10659089-10659147)
chr5 (7-64)||(189719-189776)
chr5 (7-68)||(1079969-1080029)
chr5 (7-56)||(3674865-3674914)
chr5 (9-62)||(6538870-6538922)
chr5 (9-62)||(16690499-16690552)
chr5 (7-64)||(27340867-27340923)
chr5 (7-56)||(32639049-32639097)
[»] chr7 (28 HSPs)
chr7 (7-63)||(47012586-47012642)
chr7 (7-63)||(46829478-46829534)
chr7 (7-56)||(6269372-6269421)
chr7 (11-56)||(21153056-21153100)
chr7 (7-64)||(42584800-42584857)
chr7 (7-63)||(9363386-9363442)
chr7 (7-63)||(35822991-35823047)
chr7 (7-64)||(17479002-17479060)
chr7 (7-64)||(17483437-17483495)
chr7 (7-64)||(17569719-17569777)
chr7 (7-64)||(17574154-17574212)
chr7 (7-61)||(44496819-44496873)
chr7 (7-64)||(18111628-18111685)
chr7 (7-56)||(26018046-26018095)
chr7 (7-55)||(1471307-1471355)
chr7 (9-53)||(47954120-47954164)
chr7 (7-54)||(5174568-5174615)
chr7 (7-62)||(28081799-28081853)
chr7 (7-62)||(33212042-33212096)
chr7 (7-62)||(34108871-34108926)
chr7 (7-62)||(34978296-34978351)
chr7 (7-62)||(36352603-36352658)
chr7 (9-56)||(38259069-38259116)
chr7 (7-62)||(41430168-41430223)
chr7 (11-62)||(43159595-43159646)
chr7 (7-64)||(8904423-8904480)
chr7 (7-64)||(37899229-37899286)
chr7 (7-64)||(43079649-43079705)
[»] chr1 (47 HSPs)
chr1 (7-63)||(30535990-30536046)
chr1 (7-62)||(46281436-46281491)
chr1 (7-62)||(49931553-49931608)
chr1 (9-63)||(30973551-30973605)
chr1 (7-64)||(1689389-1689446)
chr1 (7-56)||(44723366-44723415)
chr1 (7-63)||(21433417-21433473)
chr1 (7-62)||(5771764-5771819)
chr1 (7-70)||(18541068-18541130)
chr1 (7-62)||(52437494-52437549)
chr1 (9-51)||(30744997-30745039)
chr1 (9-51)||(30766448-30766490)
chr1 (7-64)||(12999839-12999895)
chr1 (7-64)||(16583077-16583134)
chr1 (7-64)||(26501293-26501349)
chr1 (9-62)||(33076119-33076172)
chr1 (13-62)||(42615860-42615908)
chr1 (7-56)||(47113280-47113328)
chr1 (7-63)||(4213071-4213127)
chr1 (9-64)||(5771269-5771325)
chr1 (7-63)||(11947794-11947850)
chr1 (7-63)||(35848411-35848467)
chr1 (6-54)||(38114291-38114339)
chr1 (7-63)||(49446814-49446870)
chr1 (7-62)||(3919300-3919354)
chr1 (7-70)||(36690589-36690651)
chr1 (7-70)||(36706690-36706752)
chr1 (11-62)||(45863741-45863792)
chr1 (7-62)||(47642623-47642678)
chr1 (7-62)||(49569996-49570051)
chr1 (7-62)||(49621363-49621417)
chr1 (7-61)||(1922441-1922495)
chr1 (7-73)||(2827727-2827792)
chr1 (7-56)||(835877-835925)
chr1 (7-64)||(9566977-9567034)
chr1 (9-62)||(12306152-12306205)
chr1 (7-64)||(27563482-27563538)
chr1 (7-64)||(27810264-27810320)
chr1 (7-56)||(29877303-29877352)
chr1 (7-64)||(31826948-31827005)
chr1 (11-56)||(31974726-31974771)
chr1 (7-64)||(39128408-39128464)
chr1 (7-56)||(43056722-43056770)
chr1 (7-64)||(45333568-45333624)
chr1 (7-56)||(45430805-45430854)
chr1 (7-56)||(50775173-50775222)
chr1 (7-64)||(51193148-51193204)
[»] chr3 (49 HSPs)
chr3 (7-62)||(9311040-9311095)
chr3 (7-64)||(19150335-19150392)
chr3 (7-63)||(26550236-26550292)
chr3 (7-63)||(27168698-27168754)
chr3 (7-63)||(37894259-37894315)
chr3 (7-55)||(45186568-45186616)
chr3 (9-63)||(349431-349485)
chr3 (7-61)||(45657786-45657840)
chr3 (7-64)||(29917040-29917097)
chr3 (7-64)||(29966193-29966250)
chr3 (7-56)||(41369603-41369651)
chr3 (7-63)||(16267914-16267969)
chr3 (7-63)||(28920066-28920122)
chr3 (7-63)||(49761203-49761258)
chr3 (7-54)||(26772376-26772423)
chr3 (7-62)||(29573372-29573427)
chr3 (7-62)||(52714733-52714788)
chr3 (8-62)||(44813463-44813517)
chr3 (7-64)||(24095422-24095479)
chr3 (7-64)||(27646496-27646552)
chr3 (7-64)||(27718802-27718859)
chr3 (7-56)||(42672242-42672291)
chr3 (7-56)||(44963835-44963884)
chr3 (9-62)||(52100261-52100313)
chr3 (7-63)||(7231-7286)
chr3 (7-63)||(11335319-11335374)
chr3 (11-63)||(38363241-38363293)
chr3 (11-63)||(39901590-39901642)
chr3 (8-64)||(41637297-41637353)
chr3 (13-61)||(48789328-48789376)
chr3 (13-61)||(48789613-48789661)
chr3 (7-63)||(51698855-51698911)
chr3 (7-63)||(54099373-54099429)
chr3 (7-62)||(31017411-31017465)
chr3 (7-62)||(48352996-48353051)
chr3 (11-62)||(49021711-49021762)
chr3 (7-62)||(51137052-51137107)
chr3 (8-63)||(52727466-52727520)
chr3 (7-70)||(53133969-53134031)
chr3 (9-63)||(47849671-47849724)
chr3 (9-55)||(51230626-51230672)
chr3 (7-56)||(1436822-1436871)
chr3 (7-64)||(10811133-10811190)
chr3 (7-40)||(33796288-33796321)
chr3 (7-56)||(33939242-33939290)
chr3 (11-64)||(47742282-47742335)
chr3 (7-64)||(51032641-51032697)
chr3 (9-62)||(52089959-52090011)
chr3 (9-62)||(52678596-52678648)
[»] chr2 (31 HSPs)
chr2 (7-62)||(12784415-12784470)
chr2 (8-61)||(12070850-12070903)
chr2 (7-63)||(6336251-6336307)
chr2 (7-62)||(21738632-21738687)
chr2 (8-65)||(14499041-14499098)
chr2 (8-56)||(40599295-40599343)
chr2 (7-54)||(2842897-2842944)
chr2 (7-62)||(3771371-3771426)
chr2 (7-62)||(19916655-19916710)
chr2 (8-63)||(24766151-24766206)
chr2 (7-62)||(33857217-33857271)
chr2 (7-56)||(5361801-5361848)
chr2 (7-61)||(7502444-7502498)
chr2 (7-64)||(1907780-1907837)
chr2 (7-64)||(26290867-26290924)
chr2 (7-64)||(44484673-44484729)
chr2 (7-63)||(5031922-5031978)
chr2 (7-63)||(43487378-43487433)
chr2 (7-62)||(31635827-31635881)
chr2 (9-56)||(32869832-32869879)
chr2 (7-62)||(40210084-40210139)
chr2 (13-56)||(45259307-45259350)
chr2 (7-53)||(4657310-4657356)
chr2 (7-61)||(34945107-34945160)
chr2 (7-64)||(9207588-9207644)
chr2 (7-64)||(11152716-11152772)
chr2 (7-64)||(14328379-14328436)
chr2 (7-56)||(16799678-16799727)
chr2 (7-64)||(36191038-36191095)
chr2 (7-64)||(43057062-43057119)
chr2 (11-64)||(45420133-45420186)
[»] chr8 (40 HSPs)
chr8 (7-63)||(67177-67233)
chr8 (7-63)||(35792068-35792124)
chr8 (7-63)||(43285979-43286035)
chr8 (7-62)||(25830262-25830317)
chr8 (7-62)||(42786676-42786731)
chr8 (7-63)||(43715874-43715929)
chr8 (7-62)||(10644818-10644873)
chr8 (7-62)||(28756535-28756590)
chr8 (7-62)||(31806299-31806353)
chr8 (13-63)||(45405530-45405580)
chr8 (7-64)||(9550424-9550480)
chr8 (9-62)||(23754725-23754778)
chr8 (7-56)||(35345426-35345475)
chr8 (7-64)||(38675601-38675658)
chr8 (7-64)||(42619993-42620050)
chr8 (7-63)||(9431302-9431357)
chr8 (7-63)||(10692438-10692493)
chr8 (9-65)||(12339176-12339232)
chr8 (7-63)||(13970918-13970974)
chr8 (7-63)||(33100485-33100541)
chr8 (7-63)||(35067159-35067215)
chr8 (7-63)||(35818936-35818991)
chr8 (7-54)||(3270895-3270942)
chr8 (7-62)||(7777196-7777251)
chr8 (7-62)||(14548840-14548894)
chr8 (13-56)||(36805146-36805189)
chr8 (16-54)||(2261481-2261519)
chr8 (11-61)||(10128642-10128692)
chr8 (7-61)||(10592297-10592351)
chr8 (7-61)||(44061718-44061772)
chr8 (7-64)||(1158352-1158408)
chr8 (7-64)||(3650111-3650167)
chr8 (11-64)||(6972153-6972206)
chr8 (9-62)||(20473779-20473831)
chr8 (7-56)||(28756667-28756716)
chr8 (7-64)||(34970205-34970261)
chr8 (13-62)||(35153015-35153064)
chr8 (11-56)||(36637800-36637845)
chr8 (15-64)||(40649448-40649497)
chr8 (7-56)||(43186302-43186350)
[»] scaffold0178 (1 HSPs)
scaffold0178 (9-62)||(9776-9829)
[»] chr6 (20 HSPs)
chr6 (7-56)||(34570611-34570660)
chr6 (7-63)||(2242038-2242094)
chr6 (11-63)||(16368067-16368119)
chr6 (7-54)||(1376372-1376419)
chr6 (7-54)||(1384120-1384167)
chr6 (6-72)||(25127848-25127914)
chr6 (7-63)||(8505790-8505846)
chr6 (7-63)||(16337939-16337995)
chr6 (7-63)||(33651019-33651075)
chr6 (7-62)||(11635551-11635606)
chr6 (7-62)||(16743283-16743337)
chr6 (7-62)||(27102115-27102169)
chr6 (7-62)||(27143937-27143991)
chr6 (7-62)||(31077793-31077847)
chr6 (9-63)||(16336827-16336881)
chr6 (7-49)||(28630111-28630153)
chr6 (7-56)||(3049547-3049595)
chr6 (7-64)||(3198958-3199015)
chr6 (15-64)||(7636452-7636501)
chr6 (7-56)||(25142567-25142616)
[»] scaffold0053 (1 HSPs)
scaffold0053 (7-63)||(12496-12552)
[»] scaffold0002 (1 HSPs)
scaffold0002 (7-55)||(469654-469702)
[»] scaffold0662 (1 HSPs)
scaffold0662 (9-64)||(1144-1199)
[»] scaffold0201 (1 HSPs)
scaffold0201 (7-62)||(8472-8527)
[»] scaffold0432 (1 HSPs)
scaffold0432 (7-65)||(6536-6594)
[»] scaffold1956 (1 HSPs)
scaffold1956 (8-64)||(769-825)
[»] scaffold0003 (1 HSPs)
scaffold0003 (7-62)||(366294-366348)
[»] scaffold0154 (1 HSPs)
scaffold0154 (7-64)||(9865-9921)


Alignment Details
Target: chr4 (Bit Score: 343; Significance: 0; HSPs: 46)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 343; E-Value: 0
Query Start/End: Original strand, 353 - 802
Target Start/End: Complemental strand, 48649136 - 48648698
Alignment:
Q  353 tcatcaaaatcaaccagaaagtaagtttgtaaatggtctgtacctgtacgtaaactaagtttggttctatttgcaaccttgtctatgtgacttatttaca 452  Q
    |||||||||||||||||||||||||||||||||||||||||||      |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  48649136 tcatcaaaatcaaccagaaagtaagtttgtaaatggtctgtac------gtaaactaagtttggttctatttgcaaccttgtctatgtgacttatttaca 48649043  T
Q  453 cactaatattcttgaaatatactctagaaaaagcttaaaagaggccgttgtatttagtcaaaaagaagatgccattggccattacaaatcacccagcagt 552  Q
    |||||   ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  48649042 cacta---ttcttgaaatatactctagaaaaagcttaaaagagtccgttgtatttagtcaaaaagaagatgccattggccattacaaatcacccagcagt 48648946  T
Q  553 taattggcccactaagaggaaactttatgatgtttgatatgcagatgcaccgtattatatcgatcggtacggaagaataaaataaaaaagggacagagag 652  Q
    ||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  48648945 taattggcccactaagaggaaactttatgatgtttg--atgcagatgcaccgtattatatcgatcggtacggaagaataaaataaaaaagggacagagag 48648848  T
Q  653 catgcatgcccgaactcaactactaataagtcnnnnnnnnnnnnnnnnnttaatccaacactcgaactacaagtttgattctcattctcaagagaaaaca 752  Q
    |||||||||||||||| |||||||||||||||                 |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  48648847 catgcatgcccgaactgaactactaataagtcaaaaagagaaagaaaaattaatccaacactcgaactacaagtttgattctcattctcaagagaaaaca 48648748  T
Q  753 aattaagaacccatccattcatccactcgtgctgcaagattcatattcaa 802  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  48648747 aattaagaacccatccattcatccactcgtgctgcaagattcatattcaa 48648698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 255; E-Value: 1e-141
Query Start/End: Original strand, 7 - 358
Target Start/End: Complemental strand, 48649573 - 48649216
Alignment:
Q  7 agagagaaagttgtcacaaaaattattagaaaatgattgtacaaatatcacttctctacattatatatgcgtaatattattgaagaaaaaggtcatttta 106  Q
    ||||||||| ||||||||||| || |||||||||| ||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  48649573 agagagaaaattgtcacaaaagttgttagaaaatggttgtaaaaatatcacttctatacattatatatgcgtaatattattgaagaaaaaggtcatttta 48649474  T
Q  107 cgtgacataatatttggcatattaagtgctgatcaattttatcagtaaatcatcaaatctctatgtaacttctgtctgtcattctggcacgggggaatt- 205  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||  |||||||||||||||||||||||||||||||||||||||| ||||||||     
T  48649473 cgtgacataatatttggcatattaagtgctgatcaattttatcattaacccatcaaatctctatgtaacttctgtctgtcattctggcactggggaattg 48649374  T
Q  206 ----gcaactaacaacaaactctgactactatatatatagttgaattatacaacaacatctataggtattcattgagactaagatattgtttaccttaaa 301  Q
        ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  48649373 caatgcaactaacaacaaactctgactactatatatatagttgaattatacaacaacatctataggtattcattgagactaagatcttgtttaccttaaa 48649274  T
Q  302 caaataagagcattaat--nnnnnnnccagagcatcataatttagttcaaacatcatca 358  Q
    |||||||||||||||||         |||||||||||||| ||||||||||||||||||    
T  48649273 caaataagagcattaataaaaaaaaaccagagcatcataa-ttagttcaaacatcatca 48649216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 7 - 63
Target Start/End: Original strand, 44257746 - 44257802
Alignment:
Q  7 agagagaaagttgtcacaaaaattattagaaaatgattgtacaaatatcacttctct 63  Q
    |||||||||||||||||||||||| |||||||||||||| |||||||||| ||||||    
T  44257746 agagagaaagttgtcacaaaaattgttagaaaatgattgcacaaatatcatttctct 44257802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 7 - 63
Target Start/End: Complemental strand, 39158160 - 39158104
Alignment:
Q  7 agagagaaagttgtcacaaaaattattagaaaatgattgtacaaatatcacttctct 63  Q
    |||||||||||||||||||||||||| | ||||||||||| ||||||||| ||||||    
T  39158160 agagagaaagttgtcacaaaaattatcaaaaaatgattgttcaaatatcatttctct 39158104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 7 - 63
Target Start/End: Complemental strand, 47288137 - 47288081
Alignment:
Q  7 agagagaaagttgtcacaaaaattattagaaaatgattgtacaaatatcacttctct 63  Q
    |||||||||||||||||||||||| ||| |||||| |||||||||||||| ||||||    
T  47288137 agagagaaagttgtcacaaaaattgttacaaaatggttgtacaaatatcatttctct 47288081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 7 - 62
Target Start/End: Original strand, 3078924 - 3078979
Alignment:
Q  7 agagagaaagttgtcacaaaaattattagaaaatgattgtacaaatatcacttctc 62  Q
    ||||||||||||||||||||| || ||| ||||||||||||||||||||| |||||    
T  3078924 agagagaaagttgtcacaaaagttgttacaaaatgattgtacaaatatcatttctc 3078979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 9 - 63
Target Start/End: Complemental strand, 21392623 - 21392569
Alignment:
Q  9 agagaaagttgtcacaaaaattattagaaaatgattgtacaaatatcacttctct 63  Q
    |||||||| ||||||||||||||||| ||||||||||| ||||||||| ||||||    
T  21392623 agagaaagctgtcacaaaaattattacaaaatgattgttcaaatatcatttctct 21392569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 7 - 64
Target Start/End: Original strand, 9472530 - 9472586
Alignment:
Q  7 agagagaaagttgtcacaaaaattattagaaaatgattgtacaaatatcacttctcta 64  Q
    |||||||||||||||| |||||||||||||||||  |||||||||||||| |||||||    
T  9472530 agagagaaagttgtca-aaaaattattagaaaatagttgtacaaatatcatttctcta 9472586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 7 - 63
Target Start/End: Complemental strand, 49585049 - 49584993
Alignment:
Q  7 agagagaaagttgtcacaaaaattattagaaaatgattgtacaaatatcacttctct 63  Q
    ||||||||||||||| ||||||||||||||||||| | ||| |||||||| ||||||    
T  49585049 agagagaaagttgtcccaaaaattattagaaaatggtcgtagaaatatcatttctct 49584993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 7 - 62
Target Start/End: Original strand, 149501 - 149556
Alignment:
Q  7 agagagaaagttgtcacaaaaattattagaaaatgattgtacaaatatcacttctc 62  Q
    |||||||||||||||||||||||||| | ||| ||||||| ||||||||| |||||    
T  149501 agagagaaagttgtcacaaaaattatcaaaaagtgattgttcaaatatcatttctc 149556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 7 - 62
Target Start/End: Original strand, 31469005 - 31469060
Alignment:
Q  7 agagagaaagttgtcacaaaaattattagaaaatgattgtacaaatatcacttctc 62  Q
    ||||||||| |||||||||||||| |||||||||| ||||||| |||||| |||||    
T  31469005 agagagaaaattgtcacaaaaattgttagaaaatggttgtacatatatcatttctc 31469060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 7 - 62
Target Start/End: Original strand, 36123476 - 36123531
Alignment:
Q  7 agagagaaagttgtcacaaaaattattagaaaatgattgtacaaatatcacttctc 62  Q
    |||||||||||||||| |||| || ||| ||||||||||||||||||||| |||||    
T  36123476 agagagaaagttgtcataaaagttgttataaaatgattgtacaaatatcatttctc 36123531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 7 - 62
Target Start/End: Original strand, 39881047 - 39881101
Alignment:
Q  7 agagagaaagttgtcacaaaaattattagaaaatgattgtacaaatatcacttctc 62  Q
    |||||||||||||||| |||| || ||||||||||||||||||||||||| |||||    
T  39881047 agagagaaagttgtca-aaaagttgttagaaaatgattgtacaaatatcatttctc 39881101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 9 - 56
Target Start/End: Complemental strand, 40308493 - 40308447
Alignment:
Q  9 agagaaagttgtcacaaaaattattagaaaatgattgtacaaatatca 56  Q
    |||||||||||||| ||||||||||| |||||||||||||||||||||    
T  40308493 agagaaagttgtca-aaaaattattataaaatgattgtacaaatatca 40308447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 9 - 64
Target Start/End: Complemental strand, 47015060 - 47015005
Alignment:
Q  9 agagaaagttgtcacaaaaattattagaaaatgattgtacaaatatcacttctcta 64  Q
    ||||||||||||||||||| || |||| |||| ||||||||||||||| |||||||    
T  47015060 agagaaagttgtcacaaaagttgttaggaaataattgtacaaatatcatttctcta 47015005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 7 - 62
Target Start/End: Complemental strand, 55996476 - 55996422
Alignment:
Q  7 agagagaaagttgtcacaaaaattattagaaaatgattgtacaaatatcacttctc 62  Q
    ||||||||| |||||| ||||||| ||||||||||||||||||||||||| |||||    
T  55996476 agagagaaaattgtca-aaaaattgttagaaaatgattgtacaaatatcatttctc 55996422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 7 - 64
Target Start/End: Complemental strand, 15522409 - 15522352
Alignment:
Q  7 agagagaaagttgtcacaaaaattattagaaaatgattgtacaaatatcacttctcta 64  Q
    |||||||||||| |||||||| || |||||||||| ||||||| |||||| |||||||    
T  15522409 agagagaaagttatcacaaaagttgttagaaaatggttgtacatatatcatttctcta 15522352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 13 - 62
Target Start/End: Complemental strand, 28203440 - 28203392
Alignment:
Q  13 aaagttgtcacaaaaattattagaaaatgattgtacaaatatcacttctc 62  Q
    |||||||||| ||||||||||| ||||||||||||||||||||| |||||    
T  28203440 aaagttgtca-aaaaattattacaaaatgattgtacaaatatcatttctc 28203392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 7 - 64
Target Start/End: Complemental strand, 31559593 - 31559536
Alignment:
Q  7 agagagaaagttgtcacaaaaattattagaaaatgattgtacaaatatcacttctcta 64  Q
    ||||||||| |||||||||  ||||| | ||||||||||||||||||||| |||||||    
T  31559593 agagagaaaattgtcacaactattatcaaaaaatgattgtacaaatatcatttctcta 31559536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 7 - 64
Target Start/End: Original strand, 32696805 - 32696862
Alignment:
Q  7 agagagaaagttgtcacaaaaattattagaaaatgattgtacaaatatcacttctcta 64  Q
    ||||||||| || |||||||| || |||||||||| |||||||||||||| |||||||    
T  32696805 agagagaaaattatcacaaaagttgttagaaaatggttgtacaaatatcatttctcta 32696862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 7 - 64
Target Start/End: Original strand, 54801504 - 54801560
Alignment:
Q  7 agagagaaagttgtcacaaaaattattagaaaatgattgtacaaatatcacttctcta 64  Q
    ||||||||| |||| ||||||||||| | ||||||||||||||||||||| |||||||    
T  54801504 agagagaaaattgt-acaaaaattataataaaatgattgtacaaatatcatttctcta 54801560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 7 - 64
Target Start/End: Original strand, 56474780 - 56474837
Alignment:
Q  7 agagagaaagttgtcacaaaaattattagaaaatgattgtacaaatatcacttctcta 64  Q
    ||||||||| |||||||||||||| | | ||||||||||| ||||||||| |||||||    
T  56474780 agagagaaaattgtcacaaaaattgtaaaaaaatgattgttcaaatatcatttctcta 56474837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 7 - 63
Target Start/End: Original strand, 1562553 - 1562608
Alignment:
Q  7 agagagaaagttgtcacaaaaattattagaaaatgattgtacaaatatcacttctct 63  Q
    |||||||||||||||| |||| || |||||||||| |||||||||||||| ||||||    
T  1562553 agagagaaagttgtca-aaaagttgttagaaaatggttgtacaaatatcatttctct 1562608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 7 - 63
Target Start/End: Original strand, 37514148 - 37514204
Alignment:
Q  7 agagagaaagttgtcacaaaaattattagaaaatgattgtacaaatatcacttctct 63  Q
    ||||||||||||||||||||| || ||| ||||||  ||||||||||||| ||||||    
T  37514148 agagagaaagttgtcacaaaagttgttacaaaatggatgtacaaatatcatttctct 37514204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 7 - 63
Target Start/End: Complemental strand, 40348848 - 40348793
Alignment:
Q  7 agagagaaagttgtcacaaaaattattagaaaatgattgtacaaatatcacttctct 63  Q
    ||||||||| ||||||||||||||| || ||||||||||| ||||||||| ||||||    
T  40348848 agagagaaaattgtcacaaaaatta-taaaaaatgattgttcaaatatcatttctct 40348793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 7 - 63
Target Start/End: Complemental strand, 42815459 - 42815403
Alignment:
Q  7 agagagaaagttgtcacaaaaattattagaaaatgattgtacaaatatcacttctct 63  Q
    ||||||||||||||||||||| || ||| |||||  |||||||||||||| ||||||    
T  42815459 agagagaaagttgtcacaaaagttgttacaaaatagttgtacaaatatcatttctct 42815403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 7 - 62
Target Start/End: Original strand, 149304 - 149358
Alignment:
Q  7 agagagaaagttgtcacaaaaattattagaaaatgattgtacaaatatcacttctc 62  Q
    |||||||||||||||| ||||||| ||||||| || |||||||||||||| |||||    
T  149304 agagagaaagttgtca-aaaaattgttagaaattggttgtacaaatatcatttctc 149358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 7 - 62
Target Start/End: Original strand, 2738284 - 2738339
Alignment:
Q  7 agagagaaagttgtcacaaaaattattagaaaatgattgtacaaatatcacttctc 62  Q
    |||||||||||| ||||||||||| | | ||||||||||| ||||||||| |||||    
T  2738284 agagagaaagttatcacaaaaattgtcaaaaaatgattgttcaaatatcatttctc 2738339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 7 - 54
Target Start/End: Complemental strand, 15985312 - 15985265
Alignment:
Q  7 agagagaaagttgtcacaaaaattattagaaaatgattgtacaaatat 54  Q
    |||||||||||||| ||||||||| ||| |||||| ||||||||||||    
T  15985312 agagagaaagttgtaacaaaaattgttaaaaaatggttgtacaaatat 15985265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 7 - 62
Target Start/End: Complemental strand, 40335843 - 40335789
Alignment:
Q  7 agagagaaagttgtcacaaaaattattagaaaatgattgtacaaatatcacttctc 62  Q
    |||||||||||||||| ||||||| | | ||||||||||||||||||||| |||||    
T  40335843 agagagaaagttgtca-aaaaattgtaataaaatgattgtacaaatatcatttctc 40335789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 7 - 62
Target Start/End: Original strand, 40721981 - 40722035
Alignment:
Q  7 agagagaaagttgtcacaaaaattattagaaaatgattgtacaaatatcacttctc 62  Q
    ||||||||||||||| |||||||||||| ||||||  ||||||||||||| |||||    
T  40721981 agagagaaagttgtc-caaaaattattataaaatggatgtacaaatatcatttctc 40722035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 8 - 63
Target Start/End: Original strand, 44170637 - 44170691
Alignment:
Q  8 gagagaaagttgtcacaaaaattattagaaaatgattgtacaaatatcacttctct 63  Q
    ||||||||||||||| ||||||||| | |||||| |||||||||||||| ||||||    
T  44170637 gagagaaagttgtca-aaaaattataacaaaatggttgtacaaatatcatttctct 44170691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 7 - 61
Target Start/End: Original strand, 336824 - 336877
Alignment:
Q  7 agagagaaagttgtcacaaaaattattagaaaatgattgtacaaatatcacttct 61  Q
    |||||||||||||||||||||||| | | ||||| ||||||||||||||| ||||    
T  336824 agagagaaagttgtcacaaaaattgtca-aaaataattgtacaaatatcatttct 336877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 9 - 63
Target Start/End: Complemental strand, 51389368 - 51389315
Alignment:
Q  9 agagaaagttgtcacaaaaattattagaaaatgattgtacaaatatcacttctct 63  Q
    |||||||||||||| ||||||| |||  |||||||||||||||||||| ||||||    
T  51389368 agagaaagttgtca-aaaaattgttactaaatgattgtacaaatatcatttctct 51389315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 7 - 64
Target Start/End: Complemental strand, 4577611 - 4577555
Alignment:
Q  7 agagagaaagttgtcacaaaaattattagaaaatgattgtacaaatatcacttctcta 64  Q
    |||||||||||||| ||||||||| |  ||||||| |||||||||||||| |||||||    
T  4577611 agagagaaagttgt-acaaaaattgtacgaaaatggttgtacaaatatcatttctcta 4577555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 7 - 63
Target Start/End: Original strand, 11546917 - 11546974
Alignment:
Q  7 agagagaaagttgtcacaaaaa-ttattagaaaatgattgtacaaatatcacttctct 63  Q
    |||||||||||| ||||||||| || |||||||||| ||||| |||||||| ||||||    
T  11546917 agagagaaagttatcacaaaaagttgttagaaaatggttgtaaaaatatcatttctct 11546974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 7 - 64
Target Start/End: Original strand, 29227259 - 29227316
Alignment:
Q  7 agagagaaagttgtcacaaaaattattagaaaatgattgtacaaatatcacttctcta 64  Q
    |||||||||||| ||||||||||||| | ||| || |||| ||||||||| |||||||    
T  29227259 agagagaaagttatcacaaaaattatcaaaaagtggttgttcaaatatcatttctcta 29227316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 9 - 62
Target Start/End: Complemental strand, 30866405 - 30866353
Alignment:
Q  9 agagaaagttgtcacaaaaattattagaaaatgattgtacaaatatcacttctc 62  Q
    |||||||||||||| |||| |||| | ||||||||||||||||||||| |||||    
T  30866405 agagaaagttgtca-aaaatttatcataaaatgattgtacaaatatcatttctc 30866353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 7 - 56
Target Start/End: Original strand, 33484125 - 33484173
Alignment:
Q  7 agagagaaagttgtcacaaaaattattagaaaatgattgtacaaatatca 56  Q
    ||||||||||||||| |||||||||| | |||||| ||||||||||||||    
T  33484125 agagagaaagttgtc-caaaaattatcacaaaatggttgtacaaatatca 33484173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 7 - 56
Target Start/End: Complemental strand, 38519848 - 38519799
Alignment:
Q  7 agagagaaagttgtcacaaaaattattagaaaatgattgtacaaatatca 56  Q
    |||||||||||||||||||||||| | | |||||| |||| |||||||||    
T  38519848 agagagaaagttgtcacaaaaattgtcaaaaaatggttgttcaaatatca 38519799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 7 - 64
Target Start/End: Complemental strand, 40755975 - 40755919
Alignment:
Q  7 agagagaaagttgtcacaaaaattattagaaaatgattgtacaaatatcacttctcta 64  Q
    ||||||||| || ||| ||||||| |||||||||| |||||||||||||| |||||||    
T  40755975 agagagaaaattatca-aaaaattgttagaaaatggttgtacaaatatcatttctcta 40755919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 9 - 54
Target Start/End: Original strand, 43759170 - 43759214
Alignment:
Q  9 agagaaagttgtcacaaaaattattagaaaatgattgtacaaatat 54  Q
    |||||||||||||| ||||||| |||||||||| ||||||||||||    
T  43759170 agagaaagttgtca-aaaaattgttagaaaatggttgtacaaatat 43759214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 32 - 69
Target Start/End: Complemental strand, 50980632 - 50980595
Alignment:
Q  32 ttagaaaatgattgtacaaatatcacttctctacatta 69  Q
    ||||||||||||||||||||||||| ||||||| ||||    
T  50980632 ttagaaaatgattgtacaaatatcatttctctatatta 50980595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 7 - 64
Target Start/End: Original strand, 51107458 - 51107514
Alignment:
Q  7 agagagaaagttgtcacaaaaattattagaaaatgattgtacaaatatcacttctcta 64  Q
    ||||||||||||||  ||||||||||   ||||||||||||||||||||| |||||||    
T  51107458 agagagaaagttgtg-caaaaattatacaaaaatgattgtacaaatatcatttctcta 51107514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 7 - 56
Target Start/End: Original strand, 52263895 - 52263944
Alignment:
Q  7 agagagaaagttgtcacaaaaattattagaaaatgattgtacaaatatca 56  Q
    |||||||||||||| | ||||||||| | |||||||||||| ||||||||    
T  52263895 agagagaaagttgttataaaaattatcaaaaaatgattgtataaatatca 52263944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 9 - 62
Target Start/End: Original strand, 52379053 - 52379106
Alignment:
Q  9 agagaaagttgtcacaaaaattattagaaaatgattgtacaaatatcacttctc 62  Q
    ||||| |||||||||||||||||||| ||| ||  ||||||||||||| |||||    
T  52379053 agagagagttgtcacaaaaattattaaaaagtggatgtacaaatatcatttctc 52379106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 46; Significance: 8e-17; HSPs: 36)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 7 - 64
Target Start/End: Original strand, 6940166 - 6940223
Alignment:
Q  7 agagagaaagttgtcacaaaaattattagaaaatgattgtacaaatatcacttctcta 64  Q
    |||||||||||||||||||||||||||| |||||| |||||||||||||| |||||||    
T  6940166 agagagaaagttgtcacaaaaattattataaaatggttgtacaaatatcatttctcta 6940223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 7 - 63
Target Start/End: Original strand, 6758807 - 6758863
Alignment:
Q  7 agagagaaagttgtcacaaaaattattagaaaatgattgtacaaatatcacttctct 63  Q
    |||||||||||||||||||||||| |||||||||| ||||||| |||||| ||||||    
T  6758807 agagagaaagttgtcacaaaaattgttagaaaatggttgtacatatatcatttctct 6758863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 7 - 62
Target Start/End: Complemental strand, 22098310 - 22098255
Alignment:
Q  7 agagagaaagttgtcacaaaaattattagaaaatgattgtacaaatatcacttctc 62  Q
    ||||||||||||||||||||| || |||||||||| |||||||||||||| |||||    
T  22098310 agagagaaagttgtcacaaaagttgttagaaaatggttgtacaaatatcatttctc 22098255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 7 - 62
Target Start/End: Complemental strand, 26686936 - 26686881
Alignment:
Q  7 agagagaaagttgtcacaaaaattattagaaaatgattgtacaaatatcacttctc 62  Q
    |||||||||||||||||||||||||||| ||||| |||||| |||||||| |||||    
T  26686936 agagagaaagttgtcacaaaaattattaaaaaataattgtataaatatcatttctc 26686881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 7 - 62
Target Start/End: Complemental strand, 26956667 - 26956612
Alignment:
Q  7 agagagaaagttgtcacaaaaattattagaaaatgattgtacaaatatcacttctc 62  Q
    |||||||||||||||||||||||||||| ||||| |||||| |||||||| |||||    
T  26956667 agagagaaagttgtcacaaaaattattaaaaaataattgtataaatatcatttctc 26956612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 7 - 56
Target Start/End: Original strand, 14321971 - 14322020
Alignment:
Q  7 agagagaaagttgtcacaaaaattattagaaaatgattgtacaaatatca 56  Q
    ||||||||||||||||||||| || |||||||||| ||||||||||||||    
T  14321971 agagagaaagttgtcacaaaagttgttagaaaatggttgtacaaatatca 14322020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 7 - 64
Target Start/End: Complemental strand, 18695373 - 18695316
Alignment:
Q  7 agagagaaagttgtcacaaaaattattagaaaatgattgtacaaatatcacttctcta 64  Q
    ||||||||||||||||||||| || ||| |||||| |||||||||||||| |||||||    
T  18695373 agagagaaagttgtcacaaaagttgttacaaaatggttgtacaaatatcatttctcta 18695316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 7 - 63
Target Start/End: Original strand, 1293102 - 1293158
Alignment:
Q  7 agagagaaagttgtcacaaaaattattagaaaatgattgtacaaatatcacttctct 63  Q
    ||||||||||||||||||||| || ||| |||||| |||||||||||||| ||||||    
T  1293102 agagagaaagttgtcacaaaagttgttaaaaaatggttgtacaaatatcatttctct 1293158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 7 - 63
Target Start/End: Complemental strand, 34379508 - 34379452
Alignment:
Q  7 agagagaaagttgtcacaaaaattattagaaaatgattgtacaaatatcacttctct 63  Q
    ||||||||| |||||||||||||||||  |||||| |||| ||||||||||||||||    
T  34379508 agagagaaaattgtcacaaaaattatttaaaaatggttgttcaaatatcacttctct 34379452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 11 - 62
Target Start/End: Complemental strand, 29687132 - 29687081
Alignment:
Q  11 agaaagttgtcacaaaaattattagaaaatgattgtacaaatatcacttctc 62  Q
    |||||||||||| ||||||| ||||||||| ||||||||||||||| |||||    
T  29687132 agaaagttgtcataaaaattgttagaaaattattgtacaaatatcatttctc 29687081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 7 - 62
Target Start/End: Complemental strand, 40829469 - 40829414
Alignment:
Q  7 agagagaaagttgtcacaaaaattattagaaaatgattgtacaaatatcacttctc 62  Q
    ||||| ||| |||||||||||||||||| |||||| |||||||||||||| |||||    
T  40829469 agagaaaaaattgtcacaaaaattattaaaaaatggttgtacaaatatcatttctc 40829414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 8 - 62
Target Start/End: Original strand, 36416080 - 36416133
Alignment:
Q  8 gagagaaagttgtcacaaaaattattagaaaatgattgtacaaatatcacttctc 62  Q
    ||||||||||||||| ||||||| |||||||||| |||||||||||||| |||||    
T  36416080 gagagaaagttgtca-aaaaattgttagaaaatggttgtacaaatatcatttctc 36416133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 7 - 64
Target Start/End: Complemental strand, 884496 - 884439
Alignment:
Q  7 agagagaaagttgtcacaaaaattattagaaaatgattgtacaaatatcacttctcta 64  Q
    ||||| ||||||||||||||| ||||||| | |||| ||||||||||||| |||||||    
T  884496 agagataaagttgtcacaaaatttattaggagatgaatgtacaaatatcatttctcta 884439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 11 - 64
Target Start/End: Complemental strand, 29402232 - 29402180
Alignment:
Q  11 agaaagttgtcacaaaaattattagaaaatgattgtacaaatatcacttctcta 64  Q
    |||||||||||| ||||||||||| ||| ||||||||||||||||| |||||||    
T  29402232 agaaagttgtca-aaaaattattacaaagtgattgtacaaatatcatttctcta 29402180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 9 - 62
Target Start/End: Original strand, 38293377 - 38293430
Alignment:
Q  9 agagaaagttgtcacaaaaattattagaaaatgattgtacaaatatcacttctc 62  Q
    |||||||||||||||||||||| ||| |||||| ||||| |||||||| |||||    
T  38293377 agagaaagttgtcacaaaaattgttataaaatggttgtaaaaatatcatttctc 38293430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 7 - 56
Target Start/End: Complemental strand, 39195772 - 39195723
Alignment:
Q  7 agagagaaagttgtcacaaaaattattagaaaatgattgtacaaatatca 56  Q
    |||||||||||||||||||||||||| | ||| ||||||| |||||||||    
T  39195772 agagagaaagttgtcacaaaaattatcaaaaagtgattgttcaaatatca 39195723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 7 - 63
Target Start/End: Original strand, 7076585 - 7076640
Alignment:
Q  7 agagagaaagttgtcacaaaaattattagaaaatgattgtacaaatatcacttctct 63  Q
    ||||||||| ||||||||||||||| || ||||||||||| ||||||||| ||||||    
T  7076585 agagagaaaattgtcacaaaaatta-taaaaaatgattgttcaaatatcatttctct 7076640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 11 - 63
Target Start/End: Complemental strand, 14011368 - 14011316
Alignment:
Q  11 agaaagttgtcacaaaaattattagaaaatgattgtacaaatatcacttctct 63  Q
    ||||||||||||||||| || ||| ||||||||||| ||||||||| ||||||    
T  14011368 agaaagttgtcacaaaagttgttacaaaatgattgttcaaatatcatttctct 14011316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 7 - 63
Target Start/End: Original strand, 19840002 - 19840058
Alignment:
Q  7 agagagaaagttgtcacaaaaattattagaaaatgattgtacaaatatcacttctct 63  Q
    |||||||||||||||||||||||| | | ||||||| ||| ||||||||| ||||||    
T  19840002 agagagaaagttgtcacaaaaattgtcataaaatgaatgttcaaatatcatttctct 19840058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 7 - 67
Target Start/End: Original strand, 27005496 - 27005555
Alignment:
Q  7 agagagaaagttgtcacaaaaattattagaaaatgattgtacaaatatcacttctctacat 67  Q
    ||||| |||||||| ||||||||||| | ||||| ||||||||||||||| ||||||||||    
T  27005496 agagataaagttgt-acaaaaattatcaaaaaataattgtacaaatatcatttctctacat 27005555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 7 - 63
Target Start/End: Complemental strand, 32912093 - 32912037
Alignment:
Q  7 agagagaaagttgtcacaaaaattattagaaaatgattgtacaaatatcacttctct 63  Q
    ||||||||| |||||||||||||||| | ||||||| ||| ||||||||| ||||||    
T  32912093 agagagaaaattgtcacaaaaattatcataaaatgaatgttcaaatatcatttctct 32912037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 8 - 64
Target Start/End: Complemental strand, 33191600 - 33191544
Alignment:
Q  8 gagagaaagttgtcacaaaaattattagaaaatgattgtacaaatatcacttctcta 64  Q
    ||||||||||||||  |||||||  ||||||||||||||| |||||||| |||||||    
T  33191600 gagagaaagttgtcttaaaaattgatagaaaatgattgtataaatatcatttctcta 33191544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 7 - 63
Target Start/End: Complemental strand, 38493679 - 38493624
Alignment:
Q  7 agagagaaagttgtcacaaaaattattagaaaatgattgtacaaatatcacttctct 63  Q
    |||||||||||| |||||||| ||||||| |||| ||||||||||||||| ||||||    
T  38493679 agagagaaagttatcacaaaagttattag-aaattattgtacaaatatcatttctct 38493624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 9 - 64
Target Start/End: Complemental strand, 4088496 - 4088441
Alignment:
Q  9 agagaaagttgtcacaaaaattattagaaaatgattgtacaaatatcacttctcta 64  Q
    ||||||||||||||||||| || ||| ||||||  ||||||||||||| |||||||    
T  4088496 agagaaagttgtcacaaaagttgttataaaatggatgtacaaatatcatttctcta 4088441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 7 - 62
Target Start/End: Complemental strand, 6529073 - 6529019
Alignment:
Q  7 agagagaaagttgtcacaaaaattattagaaaatgattgtacaaatatcacttctc 62  Q
    ||||| |||||||||| ||||||| ||||||||| ||||||||||||||| |||||    
T  6529073 agagaaaaagttgtca-aaaaattgttagaaaataattgtacaaatatcatttctc 6529019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 8 - 63
Target Start/End: Complemental strand, 21012622 - 21012567
Alignment:
Q  8 gagagaaagttgtcacaaaaattattagaaaatgattgtacaaatatcacttctct 63  Q
    ||||||||||||||||||||||| | | |||||| |||||||||||| | ||||||    
T  21012622 gagagaaagttgtcacaaaaattgtcataaaatggttgtacaaatataatttctct 21012567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 13 - 56
Target Start/End: Complemental strand, 35098669 - 35098626
Alignment:
Q  13 aaagttgtcacaaaaattattagaaaatgattgtacaaatatca 56  Q
    |||||||||| |||||||||||| |||||||||| |||||||||    
T  35098669 aaagttgtcataaaaattattagcaaatgattgttcaaatatca 35098626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 9 - 63
Target Start/End: Original strand, 372402 - 372456
Alignment:
Q  9 agagaaagttgtcacaaaaattattagaaaatgattgtacaaatatcacttctct 63  Q
    ||||||| || |||||| |||||||| |||||| |||||||||||||| ||||||    
T  372402 agagaaaattatcacaacaattattataaaatggttgtacaaatatcatttctct 372456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 7 - 65
Target Start/End: Original strand, 10659089 - 10659147
Alignment:
Q  7 agagagaaagttgtcacaaaaattattagaaaatgattgtacaaatatcacttctctac 65  Q
    ||||| ||||||||||||||| |||||| ||||| | ||| ||||||||| ||||||||    
T  10659089 agagataaagttgtcacaaaagttattaaaaaattaatgttcaaatatcatttctctac 10659147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 7 - 64
Target Start/End: Original strand, 189719 - 189776
Alignment:
Q  7 agagagaaagttgtcacaaaaattattagaaaatgattgtacaaatatcacttctcta 64  Q
    ||||||||||||||||||||| |||| | ||||||  ||| ||||||||| |||||||    
T  189719 agagagaaagttgtcacaaaagttatcataaaatggatgttcaaatatcatttctcta 189776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 7 - 68
Target Start/End: Original strand, 1079969 - 1080029
Alignment:
Q  7 agagagaaagttgtcacaaaaattattagaaaatgattgtacaaatatcacttctctacatt 68  Q
    ||||||||||||||||||||||||  || ||||| ||||| ||||||||| |||||| ||||    
T  1079969 agagagaaagttgtcacaaaaatt-gtaaaaaataattgttcaaatatcatttctcttcatt 1080029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 7 - 56
Target Start/End: Original strand, 3674865 - 3674914
Alignment:
Q  7 agagagaaagttgtcacaaaaattattagaaaatgattgtacaaatatca 56  Q
    ||||||||||||||| |||||||||| |  |||| |||||||||||||||    
T  3674865 agagagaaagttgtcccaaaaattatcaagaaataattgtacaaatatca 3674914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 9 - 62
Target Start/End: Complemental strand, 6538922 - 6538870
Alignment:
Q  9 agagaaagttgtcacaaaaattattagaaaatgattgtacaaatatcacttctc 62  Q
    |||||||||||||| ||||||||| | ||||| ||||||||||||||| |||||    
T  6538922 agagaaagttgtca-aaaaattatcacaaaataattgtacaaatatcatttctc 6538870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 9 - 62
Target Start/End: Complemental strand, 16690552 - 16690499
Alignment:
Q  9 agagaaagttgtcacaaaaattattagaaaatgattgtacaaatatcacttctc 62  Q
    ||||||||||||||||||| || |||  ||||| |||||||||||||| |||||    
T  16690552 agagaaagttgtcacaaaagttgttaagaaatggttgtacaaatatcatttctc 16690499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 7 - 64
Target Start/End: Complemental strand, 27340923 - 27340867
Alignment:
Q  7 agagagaaagttgtcacaaaaattattagaaaatgattgtacaaatatcacttctcta 64  Q
    ||||||||| |||||| ||||||||| | ||| ||||||||||||||||| |||||||    
T  27340923 agagagaaaattgtca-aaaaattataataaagtgattgtacaaatatcatttctcta 27340867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 7 - 56
Target Start/End: Complemental strand, 32639097 - 32639049
Alignment:
Q  7 agagagaaagttgtcacaaaaattattagaaaatgattgtacaaatatca 56  Q
    ||||||||||||||||||||| || | | |||||||||||||||||||||    
T  32639097 agagagaaagttgtcacaaaatttgt-acaaaatgattgtacaaatatca 32639049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 45; Significance: 3e-16; HSPs: 28)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 7 - 63
Target Start/End: Original strand, 47012586 - 47012642
Alignment:
Q  7 agagagaaagttgtcacaaaaattattagaaaatgattgtacaaatatcacttctct 63  Q
    ||||| ||| |||||||||||||||||||||||||||||||||||||||| ||||||    
T  47012586 agagataaaattgtcacaaaaattattagaaaatgattgtacaaatatcatttctct 47012642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 7 - 63
Target Start/End: Complemental strand, 46829534 - 46829478
Alignment:
Q  7 agagagaaagttgtcacaaaaattattagaaaatgattgtacaaatatcacttctct 63  Q
    |||||||||||||||||||||||| ||| |||||| |||||||||||||| ||||||    
T  46829534 agagagaaagttgtcacaaaaattgttacaaaatggttgtacaaatatcatttctct 46829478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 7 - 56
Target Start/End: Complemental strand, 6269421 - 6269372
Alignment:
Q  7 agagagaaagttgtcacaaaaattattagaaaatgattgtacaaatatca 56  Q
    |||||||||||||||||||||||| ||| |||||| ||||||||||||||    
T  6269421 agagagaaagttgtcacaaaaattgttataaaatggttgtacaaatatca 6269372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 11 - 56
Target Start/End: Complemental strand, 21153100 - 21153056
Alignment:
Q  11 agaaagttgtcacaaaaattattagaaaatgattgtacaaatatca 56  Q
    |||||||||||| |||||||||||||||||||||||||||||||||    
T  21153100 agaaagttgtca-aaaaattattagaaaatgattgtacaaatatca 21153056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 7 - 64
Target Start/End: Complemental strand, 42584857 - 42584800
Alignment:
Q  7 agagagaaagttgtcacaaaaattattagaaaatgattgtacaaatatcacttctcta 64  Q
    ||||||||||||||||||||| || |||||||||| ||||||| |||||| |||||||    
T  42584857 agagagaaagttgtcacaaaagttgttagaaaatggttgtacatatatcatttctcta 42584800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 7 - 63
Target Start/End: Complemental strand, 9363442 - 9363386
Alignment:
Q  7 agagagaaagttgtcacaaaaattattagaaaatgattgtacaaatatcacttctct 63  Q
    ||||| ||||||||||||||| || ||| ||||||||||||||||||||| ||||||    
T  9363442 agagataaagttgtcacaaaagttgttataaaatgattgtacaaatatcatttctct 9363386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 7 - 63
Target Start/End: Original strand, 35822991 - 35823047
Alignment:
Q  7 agagagaaagttgtcacaaaaattattagaaaatgattgtacaaatatcacttctct 63  Q
    |||||||||||||||| ||||||| ||||||||||  ||||||||||||| ||||||    
T  35822991 agagagaaagttgtcataaaaattgttagaaaatggatgtacaaatatcatttctct 35823047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 7 - 64
Target Start/End: Complemental strand, 17479060 - 17479002
Alignment:
Q  7 agagagaaagttgtcacaaaaattattagaaaat-gattgtacaaatatcacttctcta 64  Q
    ||||| || ||||||||||||||||||| ||||| |||||||||||||||| |||||||    
T  17479060 agagaaaatgttgtcacaaaaattattacaaaatggattgtacaaatatcatttctcta 17479002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 7 - 64
Target Start/End: Complemental strand, 17483495 - 17483437
Alignment:
Q  7 agagagaaagttgtcacaaaaattattagaaaat-gattgtacaaatatcacttctcta 64  Q
    ||||| || ||||||||||||||||||| ||||| |||||||||||||||| |||||||    
T  17483495 agagaaaatgttgtcacaaaaattattacaaaatggattgtacaaatatcatttctcta 17483437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 7 - 64
Target Start/End: Original strand, 17569719 - 17569777
Alignment:
Q  7 agagagaaagttgtcacaaaaattattagaaaat-gattgtacaaatatcacttctcta 64  Q
    ||||| || ||||||||||||||||||| ||||| |||||||||||||||| |||||||    
T  17569719 agagaaaatgttgtcacaaaaattattacaaaatggattgtacaaatatcatttctcta 17569777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 7 - 64
Target Start/End: Original strand, 17574154 - 17574212
Alignment:
Q  7 agagagaaagttgtcacaaaaattattagaaaat-gattgtacaaatatcacttctcta 64  Q
    ||||| || ||||||||||||||||||| ||||| |||||||||||||||| |||||||    
T  17574154 agagaaaatgttgtcacaaaaattattacaaaatggattgtacaaatatcatttctcta 17574212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 7 - 61
Target Start/End: Original strand, 44496819 - 44496873
Alignment:
Q  7 agagagaaagttgtcacaaaaattattagaaaatgattgtacaaatatcacttct 61  Q
    |||||||||||||||||||||||| |||||||||  || ||||||||||| ||||    
T  44496819 agagagaaagttgtcacaaaaattgttagaaaatagttatacaaatatcatttct 44496873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 7 - 64
Target Start/End: Original strand, 18111628 - 18111685
Alignment:
Q  7 agagagaaagttgtcacaaaaattattagaaaatgattgtacaaatatcacttctcta 64  Q
    ||||||||| |||||||||||||||||| |||||| ||||| || ||||| |||||||    
T  18111628 agagagaaaattgtcacaaaaattattataaaatggttgtagaagtatcatttctcta 18111685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 7 - 56
Target Start/End: Complemental strand, 26018095 - 26018046
Alignment:
Q  7 agagagaaagttgtcacaaaaattattagaaaatgattgtacaaatatca 56  Q
    ||||| || |||||||||||| |||||| |||||||||||||||||||||    
T  26018095 agagataatgttgtcacaaaagttattataaaatgattgtacaaatatca 26018046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 7 - 55
Target Start/End: Original strand, 1471307 - 1471355
Alignment:
Q  7 agagagaaagttgtcacaaaaattattagaaaatgattgtacaaatatc 55  Q
    ||||||||||||||||||||| || ||| |||||| |||||||||||||    
T  1471307 agagagaaagttgtcacaaaagttgttacaaaatggttgtacaaatatc 1471355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 9 - 53
Target Start/End: Original strand, 47954120 - 47954164
Alignment:
Q  9 agagaaagttgtcacaaaaattattagaaaatgattgtacaaata 53  Q
    ||||||||||||||||||| || ||||||||||||||| ||||||    
T  47954120 agagaaagttgtcacaaaagttgttagaaaatgattgtgcaaata 47954164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 7 - 54
Target Start/End: Original strand, 5174568 - 5174615
Alignment:
Q  7 agagagaaagttgtcacaaaaattattagaaaatgattgtacaaatat 54  Q
    |||||||||||||||||||||||| ||| |||||| ||||||| ||||    
T  5174568 agagagaaagttgtcacaaaaattgttataaaatggttgtacatatat 5174615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 7 - 62
Target Start/End: Original strand, 28081799 - 28081853
Alignment:
Q  7 agagagaaagttgtcacaaaaattattagaaaatgattgtacaaatatcacttctc 62  Q
    |||||||||||||| | ||||||||||| |||||| |||||||||||||| |||||    
T  28081799 agagagaaagttgtaa-aaaaattattacaaaatggttgtacaaatatcatttctc 28081853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 7 - 62
Target Start/End: Complemental strand, 33212096 - 33212042
Alignment:
Q  7 agagagaaagttgtcacaaaaattattagaaaatgattgtacaaatatcacttctc 62  Q
    ||||| |||||||||| ||||||| |||||||||| |||||||||||||| |||||    
T  33212096 agagataaagttgtca-aaaaattgttagaaaatggttgtacaaatatcatttctc 33212042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 7 - 62
Target Start/End: Original strand, 34108871 - 34108926
Alignment:
Q  7 agagagaaagttgtcacaaaaattattagaaaatgattgtacaaatatcacttctc 62  Q
    ||||||||| ||||||||||| || |||||||||| ||||||| |||||| |||||    
T  34108871 agagagaaaattgtcacaaaagttgttagaaaatggttgtacatatatcatttctc 34108926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 7 - 62
Target Start/End: Complemental strand, 34978351 - 34978296
Alignment:
Q  7 agagagaaagttgtcacaaaaattattagaaaatgattgtacaaatatcacttctc 62  Q
    |||||||||||||||||||||||| | | ||| ||||||| ||||||||| |||||    
T  34978351 agagagaaagttgtcacaaaaattgtcaaaaagtgattgttcaaatatcatttctc 34978296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 7 - 62
Target Start/End: Original strand, 36352603 - 36352658
Alignment:
Q  7 agagagaaagttgtcacaaaaattattagaaaatgattgtacaaatatcacttctc 62  Q
    ||||||||||||||||||||| || ||| |||||| ||||||| |||||| |||||    
T  36352603 agagagaaagttgtcacaaaagttgttacaaaatggttgtacatatatcatttctc 36352658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 9 - 56
Target Start/End: Complemental strand, 38259116 - 38259069
Alignment:
Q  9 agagaaagttgtcacaaaaattattagaaaatgattgtacaaatatca 56  Q
    ||||||||||||||||||| |||| | |||||| ||||||||||||||    
T  38259116 agagaaagttgtcacaaaagttatcaaaaaatggttgtacaaatatca 38259069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 7 - 62
Target Start/End: Original strand, 41430168 - 41430223
Alignment:
Q  7 agagagaaagttgtcacaaaaattattagaaaatgattgtacaaatatcacttctc 62  Q
    ||||||||||||||||||||| || |||||||||| |||| || |||||| |||||    
T  41430168 agagagaaagttgtcacaaaagttgttagaaaatggttgtccatatatcatttctc 41430223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 11 - 62
Target Start/End: Original strand, 43159595 - 43159646
Alignment:
Q  11 agaaagttgtcacaaaaattattagaaaatgattgtacaaatatcacttctc 62  Q
    |||||||||||||||||||| ||| |||||| |||| ||||||||| |||||    
T  43159595 agaaagttgtcacaaaaattgttaaaaaatggttgttcaaatatcatttctc 43159646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 7 - 64
Target Start/End: Original strand, 8904423 - 8904480
Alignment:
Q  7 agagagaaagttgtcacaaaaattattagaaaatgattgtacaaatatcacttctcta 64  Q
    ||||||||| |||||||||||||||| | |||| | |||| ||||||||| |||||||    
T  8904423 agagagaaaattgtcacaaaaattatcacaaaacggttgttcaaatatcatttctcta 8904480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 7 - 64
Target Start/End: Original strand, 37899229 - 37899286
Alignment:
Q  7 agagagaaagttgtcacaaaaattattagaaaatgattgtacaaatatcacttctcta 64  Q
    |||||||||||||||||||||||| | | ||||||  ||| ||||||||| |||||||    
T  37899229 agagagaaagttgtcacaaaaattgtcacaaaatggatgttcaaatatcatttctcta 37899286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 7 - 64
Target Start/End: Original strand, 43079649 - 43079705
Alignment:
Q  7 agagagaaagttgtcacaaaaattattagaaaatgattgtacaaatatcacttctcta 64  Q
    ||||||||||||||| |||||||||| | ||| || |||||||||||||| |||||||    
T  43079649 agagagaaagttgtc-caaaaattatcacaaagtggttgtacaaatatcatttctcta 43079705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 45; Significance: 3e-16; HSPs: 47)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 7 - 63
Target Start/End: Complemental strand, 30536046 - 30535990
Alignment:
Q  7 agagagaaagttgtcacaaaaattattagaaaatgattgtacaaatatcacttctct 63  Q
    |||||||||||||||||||||||| ||| ||||||||||||||||||||| ||||||    
T  30536046 agagagaaagttgtcacaaaaattgttaaaaaatgattgtacaaatatcatttctct 30535990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 7 - 62
Target Start/End: Complemental strand, 46281491 - 46281436
Alignment:
Q  7 agagagaaagttgtcacaaaaattattagaaaatgattgtacaaatatcacttctc 62  Q
    |||||||||||||||||||||||||||| |||||  |||||||||||||| |||||    
T  46281491 agagagaaagttgtcacaaaaattattacaaaatagttgtacaaatatcatttctc 46281436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 7 - 62
Target Start/End: Complemental strand, 49931608 - 49931553
Alignment:
Q  7 agagagaaagttgtcacaaaaattattagaaaatgattgtacaaatatcacttctc 62  Q
    ||||||||||||||||||||| || ||| ||||||||||||||||||||| |||||    
T  49931608 agagagaaagttgtcacaaaagttgttaaaaaatgattgtacaaatatcatttctc 49931553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 9 - 63
Target Start/End: Complemental strand, 30973605 - 30973551
Alignment:
Q  9 agagaaagttgtcacaaaaattattagaaaatgattgtacaaatatcacttctct 63  Q
    |||||||||||||||||||||| |||||||| | |||||||||||||| ||||||    
T  30973605 agagaaagttgtcacaaaaattgttagaaaagggttgtacaaatatcatttctct 30973551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 7 - 64
Target Start/End: Complemental strand, 1689446 - 1689389
Alignment:
Q  7 agagagaaagttgtcacaaaaattattagaaaatgattgtacaaatatcacttctcta 64  Q
    |||||||||||||||||||||||| ||| |||||  |||||||||||||| |||||||    
T  1689446 agagagaaagttgtcacaaaaattgttataaaatagttgtacaaatatcatttctcta 1689389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 7 - 56
Target Start/End: Complemental strand, 44723415 - 44723366
Alignment:
Q  7 agagagaaagttgtcacaaaaattattagaaaatgattgtacaaatatca 56  Q
    |||||||||||||||||||||||||||| ||||| | |||||||||||||    
T  44723415 agagagaaagttgtcacaaaaattattataaaataaatgtacaaatatca 44723366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 7 - 63
Target Start/End: Original strand, 21433417 - 21433473
Alignment:
Q  7 agagagaaagttgtcacaaaaattattagaaaatgattgtacaaatatcacttctct 63  Q
    ||||||||||||||||||||| || ||| |||||| |||||||||||||| ||||||    
T  21433417 agagagaaagttgtcacaaaagttgttacaaaatggttgtacaaatatcatttctct 21433473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 7 - 62
Target Start/End: Original strand, 5771764 - 5771819
Alignment:
Q  7 agagagaaagttgtcacaaaaattattagaaaatgattgtacaaatatcacttctc 62  Q
    |||||||||||||||||||||||||| | ||| ||||||| ||||||||| |||||    
T  5771764 agagagaaagttgtcacaaaaattatcaaaaagtgattgttcaaatatcatttctc 5771819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 7 - 70
Target Start/End: Original strand, 18541068 - 18541130
Alignment:
Q  7 agagagaaagttgtcacaaaaattattagaaaatgattgtacaaatatcacttctctacattat 70  Q
    |||||||||||||||| |||| || |||||||||| |||||||||||||| |||||||| ||||    
T  18541068 agagagaaagttgtca-aaaagttgttagaaaatggttgtacaaatatcatttctctactttat 18541130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 7 - 62
Target Start/End: Complemental strand, 52437549 - 52437494
Alignment:
Q  7 agagagaaagttgtcacaaaaattattagaaaatgattgtacaaatatcacttctc 62  Q
    |||||||||||||||||||||||||||| |||||| ||||| | |||||| |||||    
T  52437549 agagagaaagttgtcacaaaaattattaaaaaatggttgtatatatatcatttctc 52437494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 9 - 51
Target Start/End: Complemental strand, 30745039 - 30744997
Alignment:
Q  9 agagaaagttgtcacaaaaattattagaaaatgattgtacaaa 51  Q
    ||||||||||||||||||| ||||||||||||| |||||||||    
T  30745039 agagaaagttgtcacaaaagttattagaaaatggttgtacaaa 30744997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 9 - 51
Target Start/End: Complemental strand, 30766490 - 30766448
Alignment:
Q  9 agagaaagttgtcacaaaaattattagaaaatgattgtacaaa 51  Q
    ||||||||||||||||||| ||||||||||||| |||||||||    
T  30766490 agagaaagttgtcacaaaagttattagaaaatggttgtacaaa 30766448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 7 - 64
Target Start/End: Original strand, 12999839 - 12999895
Alignment:
Q  7 agagagaaagttgtcacaaaaattattagaaaatgattgtacaaatatcacttctcta 64  Q
    |||||||||||||| |||||| || |||||||||| |||||||||||||| |||||||    
T  12999839 agagagaaagttgt-acaaaagttgttagaaaatggttgtacaaatatcatttctcta 12999895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 7 - 64
Target Start/End: Original strand, 16583077 - 16583134
Alignment:
Q  7 agagagaaagttgtcacaaaaattattagaaaatgattgtacaaatatcacttctcta 64  Q
    ||||||||||||||||||||| |||||  ||| ||||||| ||||||||| |||||||    
T  16583077 agagagaaagttgtcacaaaagttatttaaaagtgattgttcaaatatcatttctcta 16583134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 7 - 64
Target Start/End: Complemental strand, 26501349 - 26501293
Alignment:
Q  7 agagagaaagttgtcacaaaaattattagaaaatgattgtacaaatatcacttctcta 64  Q
    ||||||||||||||| ||||| |||||| |||||| |||||||||||||| |||||||    
T  26501349 agagagaaagttgtc-caaaagttattacaaaatggttgtacaaatatcatttctcta 26501293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 9 - 62
Target Start/End: Complemental strand, 33076172 - 33076119
Alignment:
Q  9 agagaaagttgtcacaaaaattattagaaaatgattgtacaaatatcacttctc 62  Q
    |||||||||||||| |||| || |||||||||| |||||||||||||| |||||    
T  33076172 agagaaagttgtcataaaagttgttagaaaatggttgtacaaatatcatttctc 33076119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 13 - 62
Target Start/End: Complemental strand, 42615908 - 42615860
Alignment:
Q  13 aaagttgtcacaaaaattattagaaaatgattgtacaaatatcacttctc 62  Q
    |||||||||| ||||||||||| ||||||||||||||||||||| |||||    
T  42615908 aaagttgtca-aaaaattattaaaaaatgattgtacaaatatcatttctc 42615860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 7 - 56
Target Start/End: Complemental strand, 47113328 - 47113280
Alignment:
Q  7 agagagaaagttgtcacaaaaattattagaaaatgattgtacaaatatca 56  Q
    ||||||||||||||| |||||||||||  |||||||||||||||||||||    
T  47113328 agagagaaagttgtc-caaaaattattgcaaaatgattgtacaaatatca 47113280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 7 - 63
Target Start/End: Complemental strand, 4213127 - 4213071
Alignment:
Q  7 agagagaaagttgtcacaaaaattattagaaaatgattgtacaaatatcacttctct 63  Q
    ||||||||||||||||||||| |||| | |||||| |||| ||||||||| ||||||    
T  4213127 agagagaaagttgtcacaaaagttatcaaaaaatggttgttcaaatatcatttctct 4213071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 9 - 64
Target Start/End: Original strand, 5771269 - 5771325
Alignment:
Q  9 agagaaagttgtcacaaaaattatt-agaaaatgattgtacaaatatcacttctcta 64  Q
    |||||||||| |||||||||||||| | ||||||||| ||||||||||| |||||||    
T  5771269 agagaaagttatcacaaaaattattaaaaaaatgattttacaaatatcatttctcta 5771325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 7 - 63
Target Start/End: Complemental strand, 11947850 - 11947794
Alignment:
Q  7 agagagaaagttgtcacaaaaattattagaaaatgattgtacaaatatcacttctct 63  Q
    ||||||||||||||||||||| || | | |||||| |||||||||||||| ||||||    
T  11947850 agagagaaagttgtcacaaaagttgtcataaaatggttgtacaaatatcatttctct 11947794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 7 - 63
Target Start/End: Complemental strand, 35848467 - 35848411
Alignment:
Q  7 agagagaaagttgtcacaaaaattattagaaaatgattgtacaaatatcacttctct 63  Q
    |||||||  |||||| |||||||||| |||||||| |||||||||||||| ||||||    
T  35848467 agagagagggttgtcccaaaaattataagaaaatggttgtacaaatatcatttctct 35848411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 6 - 54
Target Start/End: Original strand, 38114291 - 38114339
Alignment:
Q  6 cagagagaaagttgtcacaaaaattattagaaaatgattgtacaaatat 54  Q
    ||||||||||||||||||||||||| ||| |||||| ||||||| ||||    
T  38114291 cagagagaaagttgtcacaaaaattgttataaaatggttgtacatatat 38114339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 7 - 63
Target Start/End: Original strand, 49446814 - 49446870
Alignment:
Q  7 agagagaaagttgtcacaaaaattattagaaaatgattgtacaaatatcacttctct 63  Q
    ||||||||||||||||||||||||  || |||||| || ||||||||||| ||||||    
T  49446814 agagagaaagttgtcacaaaaattggtacaaaatggttttacaaatatcatttctct 49446870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 7 - 62
Target Start/End: Complemental strand, 3919354 - 3919300
Alignment:
Q  7 agagagaaagttgtcacaaaaattattagaaaatgattgtacaaatatcacttctc 62  Q
    ||||||||||||||| |||||||||| | |||||| |||||||||||||| |||||    
T  3919354 agagagaaagttgtc-caaaaattataacaaaatggttgtacaaatatcatttctc 3919300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 7 - 70
Target Start/End: Original strand, 36690589 - 36690651
Alignment:
Q  7 agagagaaagttgtcacaaaaattattagaaaatgattgtacaaatatcacttctctacattat 70  Q
    |||||||||||||||| ||||||| | ||||| || |||||||||||||| ||||||| |||||    
T  36690589 agagagaaagttgtca-aaaaattgtgagaaattggttgtacaaatatcatttctctatattat 36690651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 7 - 70
Target Start/End: Original strand, 36706690 - 36706752
Alignment:
Q  7 agagagaaagttgtcacaaaaattattagaaaatgattgtacaaatatcacttctctacattat 70  Q
    |||||||||||||||| ||||||| | ||||| || |||||||||||||| ||||||| |||||    
T  36706690 agagagaaagttgtca-aaaaattgtgagaaattggttgtacaaatatcatttctctatattat 36706752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 11 - 62
Target Start/End: Original strand, 45863741 - 45863792
Alignment:
Q  11 agaaagttgtcacaaaaattattagaaaatgattgtacaaatatcacttctc 62  Q
    ||||| |||||||||||||||| | ||||| ||||||||||||||| |||||    
T  45863741 agaaaattgtcacaaaaattatcaaaaaataattgtacaaatatcatttctc 45863792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 7 - 62
Target Start/End: Original strand, 47642623 - 47642678
Alignment:
Q  7 agagagaaagttgtcacaaaaattattagaaaatgattgtacaaatatcacttctc 62  Q
    ||||||||||||||||||||| |||| | |||||| |||| ||||||||| |||||    
T  47642623 agagagaaagttgtcacaaaagttatcaaaaaatggttgttcaaatatcatttctc 47642678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 7 - 62
Target Start/End: Complemental strand, 49570051 - 49569996
Alignment:
Q  7 agagagaaagttgtcacaaaaattattagaaaatgattgtacaaatatcacttctc 62  Q
    ||||||||||||||||||||| || |||| |||||  ||||||||||||| |||||    
T  49570051 agagagaaagttgtcacaaaagttgttaggaaatggatgtacaaatatcatttctc 49569996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 7 - 62
Target Start/End: Complemental strand, 49621417 - 49621363
Alignment:
Q  7 agagagaaagttgtcacaaaaattattagaaaatgattgtacaaatatcacttctc 62  Q
    |||||||||||||||  ||||||||||| |||||| |||||||||||||| |||||    
T  49621417 agagagaaagttgtct-aaaaattattacaaaatggttgtacaaatatcatttctc 49621363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 7 - 61
Target Start/End: Original strand, 1922441 - 1922495
Alignment:
Q  7 agagagaaagttgtcacaaaaattattagaaaatgattgtacaaatatcacttct 61  Q
    |||||||  ||||||||||||||||| | ||| ||||||||||||||||| ||||    
T  1922441 agagagagggttgtcacaaaaattatcaaaaagtgattgtacaaatatcatttct 1922495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 7 - 73
Target Start/End: Original strand, 2827727 - 2827792
Alignment:
Q  7 agagagaaagttgtcacaaaaattattagaaaatgattgtacaaatatcacttctctacattatata 73  Q
    |||||||||||||| |||||||||||    || ||||||||||||||||| ||||||| ||||||||    
T  2827727 agagagaaagttgt-acaaaaattataccgaattgattgtacaaatatcatttctctatattatata 2827792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 7 - 56
Target Start/End: Complemental strand, 835925 - 835877
Alignment:
Q  7 agagagaaagttgtcacaaaaattattagaaaatgattgtacaaatatca 56  Q
    |||||||||||||| ||||||||| | | |||||||||||||||||||||    
T  835925 agagagaaagttgt-acaaaaattgtaacaaaatgattgtacaaatatca 835877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 7 - 64
Target Start/End: Original strand, 9566977 - 9567034
Alignment:
Q  7 agagagaaagttgtcacaaaaattattagaaaatgattgtacaaatatcacttctcta 64  Q
    ||||||||||||||||||||| || | | |||||| |||| ||||||||| |||||||    
T  9566977 agagagaaagttgtcacaaaagttgtcaaaaaatggttgttcaaatatcatttctcta 9567034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 9 - 62
Target Start/End: Original strand, 12306152 - 12306205
Alignment:
Q  9 agagaaagttgtcacaaaaattattagaaaatgattgtacaaatatcacttctc 62  Q
    ||||||| || ||||||||||| ||| ||||| ||||||||||||||| |||||    
T  12306152 agagaaaattatcacaaaaattgttataaaataattgtacaaatatcatttctc 12306205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 7 - 64
Target Start/End: Complemental strand, 27563538 - 27563482
Alignment:
Q  7 agagagaaagttgtcacaaaaattattagaaaatgattgtacaaatatcacttctcta 64  Q
    ||||||||| |||||| |||||||||   ||||||||||||||||||||| |||||||    
T  27563538 agagagaaaattgtca-aaaaattatagcaaaatgattgtacaaatatcatttctcta 27563482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 7 - 64
Target Start/End: Original strand, 27810264 - 27810320
Alignment:
Q  7 agagagaaagttgtcacaaaaattattagaaaatgattgtacaaatatcacttctcta 64  Q
    |||||||||||||||| |||| || ||||||| || |||||||||||||| |||||||    
T  27810264 agagagaaagttgtca-aaaagttgttagaaattggttgtacaaatatcatttctcta 27810320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 7 - 56
Target Start/End: Complemental strand, 29877352 - 29877303
Alignment:
Q  7 agagagaaagttgtcacaaaaattattagaaaatgattgtacaaatatca 56  Q
    |||||||||||||||| || | || |||||||||| ||||||||||||||    
T  29877352 agagagaaagttgtcataagagttgttagaaaatggttgtacaaatatca 29877303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 7 - 64
Target Start/End: Complemental strand, 31827005 - 31826948
Alignment:
Q  7 agagagaaagttgtcacaaaaattattagaaaatgattgtacaaatatcacttctcta 64  Q
    |||||||||||||||||||||||| | | |||||| |||| ||||||||  |||||||    
T  31827005 agagagaaagttgtcacaaaaattgtaaaaaaatggttgttcaaatatcctttctcta 31826948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 11 - 56
Target Start/End: Complemental strand, 31974771 - 31974726
Alignment:
Q  11 agaaagttgtcacaaaaattattagaaaatgattgtacaaatatca 56  Q
    |||||||||||| ||||||||| | ||||| |||||||||||||||    
T  31974771 agaaagttgtcataaaaattatcaaaaaataattgtacaaatatca 31974726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 7 - 64
Target Start/End: Complemental strand, 39128464 - 39128408
Alignment:
Q  7 agagagaaagttgtcacaaaaattattagaaaatgattgtacaaatatcacttctcta 64  Q
    ||||||||||||||| |||||||||||  ||||| ||||||||||||| | |||||||    
T  39128464 agagagaaagttgtc-caaaaattattgcaaaataattgtacaaatataatttctcta 39128408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 7 - 56
Target Start/End: Complemental strand, 43056770 - 43056722
Alignment:
Q  7 agagagaaagttgtcacaaaaattattagaaaatgattgtacaaatatca 56  Q
    ||||||||||||||| |||||||||||  |||||| ||||||||||||||    
T  43056770 agagagaaagttgtc-caaaaattattgcaaaatggttgtacaaatatca 43056722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 7 - 64
Target Start/End: Complemental strand, 45333624 - 45333568
Alignment:
Q  7 agagagaaagttgtcacaaaaattattagaaaatgattgtacaaatatcacttctcta 64  Q
    ||||||||||||||||||||| || | | ||||||||||| ||||||||| |||||||    
T  45333624 agagagaaagttgtcacaaaagttgtaa-aaaatgattgttcaaatatcatttctcta 45333568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 7 - 56
Target Start/End: Complemental strand, 45430854 - 45430805
Alignment:
Q  7 agagagaaagttgtcacaaaaattattagaaaatgattgtacaaatatca 56  Q
    |||| |||| || ||||||||||||||| ||||| |||||||||||||||    
T  45430854 agagcgaaaattatcacaaaaattattaaaaaataattgtacaaatatca 45430805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 7 - 56
Target Start/End: Original strand, 50775173 - 50775222
Alignment:
Q  7 agagagaaagttgtcacaaaaattattagaaaatgattgtacaaatatca 56  Q
    |||||||||||||||||||||||| | | ||||| |||||| ||||||||    
T  50775173 agagagaaagttgtcacaaaaattgtcaaaaaataattgtataaatatca 50775222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 7 - 64
Target Start/End: Original strand, 51193148 - 51193204
Alignment:
Q  7 agagagaaagttgtcacaaaaattattagaaaatgattgtacaaatatcacttctcta 64  Q
    ||||||||||||||| |||||||| ||| ||||||  ||||||||||||| |||||||    
T  51193148 agagagaaagttgtc-caaaaattgttataaaatggatgtacaaatatcatttctcta 51193204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 44; Significance: 0.000000000000001; HSPs: 49)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 7 - 62
Target Start/End: Complemental strand, 9311095 - 9311040
Alignment:
Q  7 agagagaaagttgtcacaaaaattattagaaaatgattgtacaaatatcacttctc 62  Q
    |||||||||||||||||||| ||||| ||||||||||||||||||||||| |||||    
T  9311095 agagagaaagttgtcacaaatattatcagaaaatgattgtacaaatatcatttctc 9311040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 7 - 64
Target Start/End: Original strand, 19150335 - 19150392
Alignment:
Q  7 agagagaaagttgtcacaaaaattattagaaaatgattgtacaaatatcacttctcta 64  Q
    ||||||||||||||||||||| || ||| ||||||||||||||||||||| |||||||    
T  19150335 agagagaaagttgtcacaaaagttgttaaaaaatgattgtacaaatatcatttctcta 19150392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 7 - 63
Target Start/End: Complemental strand, 26550292 - 26550236
Alignment:
Q  7 agagagaaagttgtcacaaaaattattagaaaatgattgtacaaatatcacttctct 63  Q
    |||||||||||||||||||||||||||| |||||| |||| ||||||||| ||||||    
T  26550292 agagagaaagttgtcacaaaaattattaaaaaatggttgtgcaaatatcatttctct 26550236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 7 - 63
Target Start/End: Original strand, 27168698 - 27168754
Alignment:
Q  7 agagagaaagttgtcacaaaaattattagaaaatgattgtacaaatatcacttctct 63  Q
    |||||||||||||||||||||||||||| |||||| |||| ||||||||| ||||||    
T  27168698 agagagaaagttgtcacaaaaattattaaaaaatggttgttcaaatatcatttctct 27168754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 7 - 63
Target Start/End: Original strand, 37894259 - 37894315
Alignment:
Q  7 agagagaaagttgtcacaaaaattattagaaaatgattgtacaaatatcacttctct 63  Q
    ||||||||||||||||||||| || |||||||||| |||||||||||||| ||||||    
T  37894259 agagagaaagttgtcacaaaagttgttagaaaatggttgtacaaatatcatttctct 37894315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 7 - 55
Target Start/End: Original strand, 45186568 - 45186616
Alignment:
Q  7 agagagaaagttgtcacaaaaattattagaaaatgattgtacaaatatc 55  Q
    |||||||||||||||||||||||| |||||||||| |||||||||||||    
T  45186568 agagagaaagttgtcacaaaaattgttagaaaatggttgtacaaatatc 45186616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 9 - 63
Target Start/End: Original strand, 349431 - 349485
Alignment:
Q  9 agagaaagttgtcacaaaaattattagaaaatgattgtacaaatatcacttctct 63  Q
    ||||||||||| |||||||||||||| |||||| |||||||||||||| ||||||    
T  349431 agagaaagttgccacaaaaattattataaaatggttgtacaaatatcatttctct 349485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 7 - 61
Target Start/End: Original strand, 45657786 - 45657840
Alignment:
Q  7 agagagaaagttgtcacaaaaattattagaaaatgattgtacaaatatcacttct 61  Q
    |||||||| ||||||||||||||| |||||||||||||||| |||||||| ||||    
T  45657786 agagagaacgttgtcacaaaaattgttagaaaatgattgtataaatatcatttct 45657840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 7 - 64
Target Start/End: Original strand, 29917040 - 29917097
Alignment:
Q  7 agagagaaagttgtcacaaaaattattagaaaatgattgtacaaatatcacttctcta 64  Q
    ||||||||||||||||||||| || |||| |||||||||||||||||| | |||||||    
T  29917040 agagagaaagttgtcacaaaagttgttaggaaatgattgtacaaatattatttctcta 29917097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 7 - 64
Target Start/End: Original strand, 29966193 - 29966250
Alignment:
Q  7 agagagaaagttgtcacaaaaattattagaaaatgattgtacaaatatcacttctcta 64  Q
    ||||||||||||||||||||| || |||| |||||||||||||||||| | |||||||    
T  29966193 agagagaaagttgtcacaaaagttgttaggaaatgattgtacaaatattatttctcta 29966250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 7 - 56
Target Start/End: Complemental strand, 41369651 - 41369603
Alignment:
Q  7 agagagaaagttgtcacaaaaattattagaaaatgattgtacaaatatca 56  Q
    |||||||||||||||| |||||||||||||||||| ||||||||||||||    
T  41369651 agagagaaagttgtca-aaaaattattagaaaatggttgtacaaatatca 41369603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 7 - 63
Target Start/End: Original strand, 16267914 - 16267969
Alignment:
Q  7 agagagaaagttgtcacaaaaattattagaaaatgattgtacaaatatcacttctct 63  Q
    ||||||||||||||  |||||||||||||||||||||| ||||||||||| ||||||    
T  16267914 agagagaaagttgtt-caaaaattattagaaaatgattatacaaatatcatttctct 16267969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 7 - 63
Target Start/End: Original strand, 28920066 - 28920122
Alignment:
Q  7 agagagaaagttgtcacaaaaattattagaaaatgattgtacaaatatcacttctct 63  Q
    ||||||||||||||||||||||||||||  ||||  |||||||||||||| ||||||    
T  28920066 agagagaaagttgtcacaaaaattattatcaaatagttgtacaaatatcatttctct 28920122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 7 - 63
Target Start/End: Original strand, 49761203 - 49761258
Alignment:
Q  7 agagagaaagttgtcacaaaaattattagaaaatgattgtacaaatatcacttctct 63  Q
    |||||||||||||| ||||||||| |||||||||| |||||||||||||| ||||||    
T  49761203 agagagaaagttgt-acaaaaattgttagaaaatggttgtacaaatatcatttctct 49761258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 7 - 54
Target Start/End: Complemental strand, 26772423 - 26772376
Alignment:
Q  7 agagagaaagttgtcacaaaaattattagaaaatgattgtacaaatat 54  Q
    |||||||||||||||||||||||||||| |||||| |||| |||||||    
T  26772423 agagagaaagttgtcacaaaaattattataaaatggttgttcaaatat 26772376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 7 - 62
Target Start/End: Original strand, 29573372 - 29573427
Alignment:
Q  7 agagagaaagttgtcacaaaaattattagaaaatgattgtacaaatatcacttctc 62  Q
    ||||||||||||||||||||| || ||| |||||| |||||||||||||| |||||    
T  29573372 agagagaaagttgtcacaaaagttgttacaaaatggttgtacaaatatcatttctc 29573427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 7 - 62
Target Start/End: Complemental strand, 52714788 - 52714733
Alignment:
Q  7 agagagaaagttgtcacaaaaattattagaaaatgattgtacaaatatcacttctc 62  Q
    |||||||||||| ||||||||||| ||||||||||  ||||||||||||| |||||    
T  52714788 agagagaaagttatcacaaaaattgttagaaaatggatgtacaaatatcatttctc 52714733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 8 - 62
Target Start/End: Original strand, 44813463 - 44813517
Alignment:
Q  8 gagagaaagttgtcacaaaaattattagaaaatgattgtacaaatatcacttctc 62  Q
    |||||| ||||||||||||| || |||||||||||||||||| |||||| |||||    
T  44813463 gagagagagttgtcacaaaagttgttagaaaatgattgtacatatatcatttctc 44813517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 7 - 64
Target Start/End: Original strand, 24095422 - 24095479
Alignment:
Q  7 agagagaaagttgtcacaaaaattattagaaaatgattgtacaaatatcacttctcta 64  Q
    |||||||||||||||||||||||||| | ||||||  ||| ||||||||| |||||||    
T  24095422 agagagaaagttgtcacaaaaattatcataaaatggatgttcaaatatcatttctcta 24095479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 7 - 64
Target Start/End: Complemental strand, 27646552 - 27646496
Alignment:
Q  7 agagagaaagttgtcacaaaaattattagaaaatgattgtacaaatatcacttctcta 64  Q
    ||||| ||||||||| |||||||||||  ||||||||||||||||||||| |||||||    
T  27646552 agagataaagttgtc-caaaaattattgcaaaatgattgtacaaatatcatttctcta 27646496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 7 - 64
Target Start/End: Original strand, 27718802 - 27718859
Alignment:
Q  7 agagagaaagttgtcacaaaaattattagaaaatgattgtacaaatatcacttctcta 64  Q
    ||||||||||||||||||||| || ||| ||||||||| ||||| ||||| |||||||    
T  27718802 agagagaaagttgtcacaaaagttgttacaaaatgattatacaagtatcatttctcta 27718859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 7 - 56
Target Start/End: Complemental strand, 42672291 - 42672242
Alignment:
Q  7 agagagaaagttgtcacaaaaattattagaaaatgattgtacaaatatca 56  Q
    ||||| |||||||||||||||||||||| ||| |||||||| ||||||||    
T  42672291 agagataaagttgtcacaaaaattattaaaaagtgattgtataaatatca 42672242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 7 - 56
Target Start/End: Original strand, 44963835 - 44963884
Alignment:
Q  7 agagagaaagttgtcacaaaaattattagaaaatgattgtacaaatatca 56  Q
    ||||||||||||||||||||| || ||||||||||||||| || ||||||    
T  44963835 agagagaaagttgtcacaaaagttgttagaaaatgattgttcagatatca 44963884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 9 - 62
Target Start/End: Complemental strand, 52100313 - 52100261
Alignment:
Q  9 agagaaagttgtcacaaaaattattagaaaatgattgtacaaatatcacttctc 62  Q
    |||||||||||| ||||||||||||| |||||| |||||||||||||| |||||    
T  52100313 agagaaagttgt-acaaaaattattaaaaaatggttgtacaaatatcatttctc 52100261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 7 - 63
Target Start/End: Original strand, 7231 - 7286
Alignment:
Q  7 agagagaaagttgtcacaaaaattattagaaaatgattgtacaaatatcacttctct 63  Q
    ||||||||||||||| ||||| || | ||||||||||||||||||||||| ||||||    
T  7231 agagagaaagttgtc-caaaagttgtcagaaaatgattgtacaaatatcatttctct 7286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 7 - 63
Target Start/End: Original strand, 11335319 - 11335374
Alignment:
Q  7 agagagaaagttgtcacaaaaattattagaaaatgattgtacaaatatcacttctct 63  Q
    |||||||||||||||| |||| || |||||||||| |||||||||||||| ||||||    
T  11335319 agagagaaagttgtca-aaaagttgttagaaaatggttgtacaaatatcatttctct 11335374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 11 - 63
Target Start/End: Original strand, 38363241 - 38363293
Alignment:
Q  11 agaaagttgtcacaaaaattattagaaaatgattgtacaaatatcacttctct 63  Q
    ||||| |||||| ||||||||||| ||||| ||||||||||||||| ||||||    
T  38363241 agaaaattgtcataaaaattattaaaaaataattgtacaaatatcatttctct 38363293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 11 - 63
Target Start/End: Complemental strand, 39901642 - 39901590
Alignment:
Q  11 agaaagttgtcacaaaaattattagaaaatgattgtacaaatatcacttctct 63  Q
    ||||||||||  |||||||||| | ||||||||||||||||||||| ||||||    
T  39901642 agaaagttgttccaaaaattatcaaaaaatgattgtacaaatatcatttctct 39901590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 8 - 64
Target Start/End: Original strand, 41637297 - 41637353
Alignment:
Q  8 gagagaaagttgtcacaaaaattattagaaaatgattgtacaaatatcacttctcta 64  Q
    |||||||||||||||||||| || | | |||||  ||||||||||||||||||||||    
T  41637297 gagagaaagttgtcacaaaagttgtcaaaaaatagttgtacaaatatcacttctcta 41637353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 13 - 61
Target Start/End: Complemental strand, 48789376 - 48789328
Alignment:
Q  13 aaagttgtcacaaaaattattagaaaatgattgtacaaatatcacttct 61  Q
    |||||||||||||||||||| ||||||| ||||| ||||||||| ||||    
T  48789376 aaagttgtcacaaaaattatcagaaaataattgttcaaatatcatttct 48789328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 13 - 61
Target Start/End: Complemental strand, 48789661 - 48789613
Alignment:
Q  13 aaagttgtcacaaaaattattagaaaatgattgtacaaatatcacttct 61  Q
    |||||||||||||||||||| ||||||| ||||| ||||||||| ||||    
T  48789661 aaagttgtcacaaaaattatcagaaaataattgttcaaatatcatttct 48789613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 7 - 63
Target Start/End: Complemental strand, 51698911 - 51698855
Alignment:
Q  7 agagagaaagttgtcacaaaaattattagaaaatgattgtacaaatatcacttctct 63  Q
    |||||||||||||||||||||||  ||||||||||| | |||| |||||| ||||||    
T  51698911 agagagaaagttgtcacaaaaatggttagaaaatgactatacagatatcatttctct 51698855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 7 - 63
Target Start/End: Original strand, 54099373 - 54099429
Alignment:
Q  7 agagagaaagttgtcacaaaaattattagaaaatgattgtacaaatatcacttctct 63  Q
    ||||||||||||||||||||| || ||||||||||  ||||||||||| | ||||||    
T  54099373 agagagaaagttgtcacaaaagttgttagaaaatggatgtacaaatattatttctct 54099429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 7 - 62
Target Start/End: Original strand, 31017411 - 31017465
Alignment:
Q  7 agagagaaagttgtcacaaaaattattagaaaatgattgtacaaatatcacttctc 62  Q
    ||||||||| |||||| |||| || ||||||||||||||||||||||||| |||||    
T  31017411 agagagaaaattgtca-aaaagttgttagaaaatgattgtacaaatatcatttctc 31017465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 7 - 62
Target Start/End: Complemental strand, 48353051 - 48352996
Alignment:
Q  7 agagagaaagttgtcacaaaaattattagaaaatgattgtacaaatatcacttctc 62  Q
    ||||||||||||||||||||| || ||| ||||||  ||||||||||||| |||||    
T  48353051 agagagaaagttgtcacaaaagttgttaaaaaatggatgtacaaatatcatttctc 48352996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 11 - 62
Target Start/End: Complemental strand, 49021762 - 49021711
Alignment:
Q  11 agaaagttgtcacaaaaattattagaaaatgattgtacaaatatcacttctc 62  Q
    ||||||||||||||||| |||||| ||||||  ||||||||||||| |||||    
T  49021762 agaaagttgtcacaaaagttattaaaaaatggatgtacaaatatcatttctc 49021711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 7 - 62
Target Start/End: Original strand, 51137052 - 51137107
Alignment:
Q  7 agagagaaagttgtcacaaaaattattagaaaatgattgtacaaatatcacttctc 62  Q
    ||||| ||||||||||||||| |||||| |||||  |||||||||||||| |||||    
T  51137052 agagaaaaagttgtcacaaaagttattaaaaaatagttgtacaaatatcatttctc 51137107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 8 - 63
Target Start/End: Original strand, 52727466 - 52727520
Alignment:
Q  8 gagagaaagttgtcacaaaaattattagaaaatgattgtacaaatatcacttctct 63  Q
    ||||||||||||||| ||||||||| | ||| ||||||||||||||||| ||||||    
T  52727466 gagagaaagttgtca-aaaaattatcataaagtgattgtacaaatatcatttctct 52727520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 7 - 70
Target Start/End: Original strand, 53133969 - 53134031
Alignment:
Q  7 agagagaaagttgtcacaaaaattattagaaaatgattgtacaaatatcacttctctacattat 70  Q
    |||||||||||||| | ||||||||||| |||||| || ||||||||||| ||||||| |||||    
T  53133969 agagagaaagttgtta-aaaaattattataaaatggttttacaaatatcatttctctatattat 53134031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 9 - 63
Target Start/End: Complemental strand, 47849724 - 47849671
Alignment:
Q  9 agagaaagttgtcacaaaaattattagaaaatgattgtacaaatatcacttctct 63  Q
    |||||||||||||| ||||||||| | |||||| |||||||||||||| ||||||    
T  47849724 agagaaagttgtca-aaaaattatcacaaaatggttgtacaaatatcatttctct 47849671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 9 - 55
Target Start/End: Original strand, 51230626 - 51230672
Alignment:
Q  9 agagaaagttgtcacaaaaattattagaaaatgattgtacaaatatc 55  Q
    ||||||||||||| |||||||||| | |||||| |||||||||||||    
T  51230626 agagaaagttgtcgcaaaaattatcataaaatggttgtacaaatatc 51230672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 7 - 56
Target Start/End: Complemental strand, 1436871 - 1436822
Alignment:
Q  7 agagagaaagttgtcacaaaaattattagaaaatgattgtacaaatatca 56  Q
    |||||||| |||||| ||||| ||||||| ||||| ||||||||||||||    
T  1436871 agagagaatgttgtctcaaaagttattaggaaatggttgtacaaatatca 1436822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 7 - 64
Target Start/End: Complemental strand, 10811190 - 10811133
Alignment:
Q  7 agagagaaagttgtcacaaaaattattagaaaatgattgtacaaatatcacttctcta 64  Q
    ||||||||||||||||||||| || | | |||||| |||| ||||||||| |||||||    
T  10811190 agagagaaagttgtcacaaaagttgtcataaaatggttgttcaaatatcatttctcta 10811133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 7 - 40
Target Start/End: Complemental strand, 33796321 - 33796288
Alignment:
Q  7 agagagaaagttgtcacaaaaattattagaaaat 40  Q
    |||||||||||||||||||||||| |||||||||    
T  33796321 agagagaaagttgtcacaaaaattgttagaaaat 33796288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 7 - 56
Target Start/End: Complemental strand, 33939290 - 33939242
Alignment:
Q  7 agagagaaagttgtcacaaaaattattagaaaatgattgtacaaatatca 56  Q
    ||||||||||||||||||||||||| || |||||| |||| |||||||||    
T  33939290 agagagaaagttgtcacaaaaatta-taaaaaatggttgttcaaatatca 33939242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 11 - 64
Target Start/End: Complemental strand, 47742335 - 47742282
Alignment:
Q  11 agaaagttgtcacaaaaattattagaaaatgattgtacaaatatcacttctcta 64  Q
    |||||||| ||| |||| ||||||| ||||| |||||||||||||| |||||||    
T  47742335 agaaagttatcataaaagttattaggaaatggttgtacaaatatcatttctcta 47742282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 7 - 64
Target Start/End: Original strand, 51032641 - 51032697
Alignment:
Q  7 agagagaaagttgtcacaaaaattattagaaaatgattgtacaaatatcacttctcta 64  Q
    ||||||||| |||||| |||| || |||||||||| |||||||||||||| |||||||    
T  51032641 agagagaaaattgtca-aaaagttgttagaaaatggttgtacaaatatcatttctcta 51032697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 9 - 62
Target Start/End: Original strand, 52089959 - 52090011
Alignment:
Q  9 agagaaagttgtcacaaaaattattagaaaatgattgtacaaatatcacttctc 62  Q
    ||||||||||||||||||| |||||| |||||||||||  |||||||| |||||    
T  52089959 agagaaagttgtcacaaaa-ttattataaaatgattgtttaaatatcaattctc 52090011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 9 - 62
Target Start/End: Original strand, 52678596 - 52678648
Alignment:
Q  9 agagaaagttgtcacaaaaattattagaaaatgattgtacaaatatcacttctc 62  Q
    |||||||||||||| ||||||||||||||| || |||||||||| ||| |||||    
T  52678596 agagaaagttgtca-aaaaattattagaaattggttgtacaaatgtcatttctc 52678648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 44; Significance: 0.000000000000001; HSPs: 31)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 7 - 62
Target Start/End: Original strand, 12784415 - 12784470
Alignment:
Q  7 agagagaaagttgtcacaaaaattattagaaaatgattgtacaaatatcacttctc 62  Q
    |||||||||||||||||||||||||||| |||||| |||||||||||||| |||||    
T  12784415 agagagaaagttgtcacaaaaattattataaaatggttgtacaaatatcatttctc 12784470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 8 - 61
Target Start/End: Complemental strand, 12070903 - 12070850
Alignment:
Q  8 gagagaaagttgtcacaaaaattattagaaaatgattgtacaaatatcacttct 61  Q
    ||||||||||||||||||||||| |||||||||||||||||| |||||| ||||    
T  12070903 gagagaaagttgtcacaaaaattgttagaaaatgattgtacatatatcatttct 12070850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 7 - 63
Target Start/End: Complemental strand, 6336307 - 6336251
Alignment:
Q  7 agagagaaagttgtcacaaaaattattagaaaatgattgtacaaatatcacttctct 63  Q
    ||||||||||||||||||||| || |||||||||| |||||||||||||| ||||||    
T  6336307 agagagaaagttgtcacaaaagttgttagaaaatggttgtacaaatatcatttctct 6336251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 7 - 62
Target Start/End: Original strand, 21738632 - 21738687
Alignment:
Q  7 agagagaaagttgtcacaaaaattattagaaaatgattgtacaaatatcacttctc 62  Q
    ||||||||| || |||||||||||||||||||||| |||||||||||||| |||||    
T  21738632 agagagaaaattatcacaaaaattattagaaaatggttgtacaaatatcatttctc 21738687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 8 - 65
Target Start/End: Original strand, 14499041 - 14499098
Alignment:
Q  8 gagagaaagttgtcacaaaaattattagaaaatgattgtacaaatatcacttctctac 65  Q
    |||||||| |||||||||||||| ||| |||||| |||||||||||||| ||||||||    
T  14499041 gagagaaaattgtcacaaaaattgttataaaatggttgtacaaatatcaattctctac 14499098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 8 - 56
Target Start/End: Original strand, 40599295 - 40599343
Alignment:
Q  8 gagagaaagttgtcacaaaaattattagaaaatgattgtacaaatatca 56  Q
    ||||||||||||||||||||||| |||| ||||| ||||||||||||||    
T  40599295 gagagaaagttgtcacaaaaattgttaggaaatggttgtacaaatatca 40599343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 7 - 54
Target Start/End: Original strand, 2842897 - 2842944
Alignment:
Q  7 agagagaaagttgtcacaaaaattattagaaaatgattgtacaaatat 54  Q
    ||||||||||||||||| |||||||||| |||||| ||||||||||||    
T  2842897 agagagaaagttgtcaccaaaattattacaaaatggttgtacaaatat 2842944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 7 - 62
Target Start/End: Complemental strand, 3771426 - 3771371
Alignment:
Q  7 agagagaaagttgtcacaaaaattattagaaaatgattgtacaaatatcacttctc 62  Q
    ||||| |||||  ||||||||||||||| ||||||||||||||||||||| |||||    
T  3771426 agagataaagtcatcacaaaaattattaaaaaatgattgtacaaatatcatttctc 3771371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 7 - 62
Target Start/End: Complemental strand, 19916710 - 19916655
Alignment:
Q  7 agagagaaagttgtcacaaaaattattagaaaatgattgtacaaatatcacttctc 62  Q
    |||||||||||||||||||||||||||| ||| || |||| ||||||||| |||||    
T  19916710 agagagaaagttgtcacaaaaattattaaaaagtggttgttcaaatatcatttctc 19916655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 8 - 63
Target Start/End: Complemental strand, 24766206 - 24766151
Alignment:
Q  8 gagagaaagttgtcacaaaaattattagaaaatgattgtacaaatatcacttctct 63  Q
    |||| ||||||||||||||| |||||| |||||| |||||||||||||| ||||||    
T  24766206 gagataaagttgtcacaaaagttattaaaaaatggttgtacaaatatcatttctct 24766151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 7 - 62
Target Start/End: Complemental strand, 33857271 - 33857217
Alignment:
Q  7 agagagaaagttgtcacaaaaattattagaaaatgattgtacaaatatcacttctc 62  Q
    |||||||||||||||| ||||||| |||||||| |||||||||||||||| |||||    
T  33857271 agagagaaagttgtca-aaaaattgttagaaaaagattgtacaaatatcatttctc 33857217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 7 - 56
Target Start/End: Complemental strand, 5361848 - 5361801
Alignment:
Q  7 agagagaaagttgtcacaaaaattattagaaaatgattgtacaaatatca 56  Q
    ||||||||| ||||||  ||||||||||||||||||||||||||||||||    
T  5361848 agagagaaaattgtca--aaaattattagaaaatgattgtacaaatatca 5361801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 7 - 61
Target Start/End: Original strand, 7502444 - 7502498
Alignment:
Q  7 agagagaaagttgtcacaaaaattattagaaaatgattgtacaaatatcacttct 61  Q
    |||||||||||||||||||||||| | | |||||| |||||||||||||| ||||    
T  7502444 agagagaaagttgtcacaaaaattgtcaaaaaatggttgtacaaatatcatttct 7502498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 7 - 64
Target Start/End: Original strand, 1907780 - 1907837
Alignment:
Q  7 agagagaaagttgtcacaaaaattattagaaaatgattgtacaaatatcacttctcta 64  Q
    ||||| |||||||||||||||||||||| |||||  |||||||||||| | |||||||    
T  1907780 agagataaagttgtcacaaaaattattaaaaaatagttgtacaaatattatttctcta 1907837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 7 - 64
Target Start/End: Original strand, 26290867 - 26290924
Alignment:
Q  7 agagagaaagttgtcacaaaaattattagaaaatgattgtacaaatatcacttctcta 64  Q
    |||||||| ||| ||||||||||||||| |||||| |||||||||||| | |||||||    
T  26290867 agagagaaggttatcacaaaaattattaaaaaatggttgtacaaatataatttctcta 26290924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 7 - 64
Target Start/End: Original strand, 44484673 - 44484729
Alignment:
Q  7 agagagaaagttgtcacaaaaattattagaaaatgattgtacaaatatcacttctcta 64  Q
    |||||||||||||| ||||||||| ||| |||||| |||||||||||||| |||||||    
T  44484673 agagagaaagttgt-acaaaaattgttacaaaatggttgtacaaatatcatttctcta 44484729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 7 - 63
Target Start/End: Complemental strand, 5031978 - 5031922
Alignment:
Q  7 agagagaaagttgtcacaaaaattattagaaaatgattgtacaaatatcacttctct 63  Q
    ||||||||||||||| ||||| || ||| |||||| |||||||||||||| ||||||    
T  5031978 agagagaaagttgtcgcaaaagttgttacaaaatggttgtacaaatatcatttctct 5031922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 7 - 63
Target Start/End: Complemental strand, 43487433 - 43487378
Alignment:
Q  7 agagagaaagttgtcacaaaaattattagaaaatgattgtacaaatatcacttctct 63  Q
    ||||||||||||||||||||||||| || |||||| |||| ||||||||| ||||||    
T  43487433 agagagaaagttgtcacaaaaatta-taaaaaatggttgttcaaatatcatttctct 43487378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 7 - 62
Target Start/End: Original strand, 31635827 - 31635881
Alignment:
Q  7 agagagaaagttgtcacaaaaattattagaaaatgattgtacaaatatcacttctc 62  Q
    |||||||||||||||| |||| || |||||||||| |||||||||||||| |||||    
T  31635827 agagagaaagttgtca-aaaagttgttagaaaatggttgtacaaatatcatttctc 31635881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 9 - 56
Target Start/End: Complemental strand, 32869879 - 32869832
Alignment:
Q  9 agagaaagttgtcacaaaaattattagaaaatgattgtacaaatatca 56  Q
    |||||||||||||||||||||||| | ||||||| ||| |||||||||    
T  32869879 agagaaagttgtcacaaaaattatcataaaatgaatgttcaaatatca 32869832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 7 - 62
Target Start/End: Original strand, 40210084 - 40210139
Alignment:
Q  7 agagagaaagttgtcacaaaaattattagaaaatgattgtacaaatatcacttctc 62  Q
    |||||||||||||||||||||||||||  |||||  |||| ||||||||| |||||    
T  40210084 agagagaaagttgtcacaaaaattatttaaaaatagttgttcaaatatcatttctc 40210139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 13 - 56
Target Start/End: Original strand, 45259307 - 45259350
Alignment:
Q  13 aaagttgtcacaaaaattattagaaaatgattgtacaaatatca 56  Q
    |||||||||||||||||| ||||||||||  |||||||||||||    
T  45259307 aaagttgtcacaaaaattgttagaaaatggatgtacaaatatca 45259350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 7 - 53
Target Start/End: Complemental strand, 4657356 - 4657310
Alignment:
Q  7 agagagaaagttgtcacaaaaattattagaaaatgattgtacaaata 53  Q
    ||||| ||| |||||||||||||||||||||||| ||| ||||||||    
T  4657356 agagaaaaaattgtcacaaaaattattagaaaataattctacaaata 4657310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 7 - 61
Target Start/End: Original strand, 34945107 - 34945160
Alignment:
Q  7 agagagaaagttgtcacaaaaattattagaaaatgattgtacaaatatcacttct 61  Q
    |||||||||||||||| |||||||| || ||||||||||| ||||||||| ||||    
T  34945107 agagagaaagttgtcataaaaatta-taaaaaatgattgttcaaatatcatttct 34945160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 7 - 64
Target Start/End: Complemental strand, 9207644 - 9207588
Alignment:
Q  7 agagagaaagttgtcacaaaaattattagaaaatgattgtacaaatatcacttctcta 64  Q
    ||||||||||||||||||||| || | | ||||||||||| ||||||||| |||||||    
T  9207644 agagagaaagttgtcacaaaagttgtaa-aaaatgattgttcaaatatcatttctcta 9207588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 7 - 64
Target Start/End: Original strand, 11152716 - 11152772
Alignment:
Q  7 agagagaaagttgtcacaaaaattattagaaaatgattgtacaaatatcacttctcta 64  Q
    |||||||| ||||| |||||||||||   ||||||||||||||||||||| |||||||    
T  11152716 agagagaaggttgt-acaaaaattatataaaaatgattgtacaaatatcatttctcta 11152772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 7 - 64
Target Start/End: Complemental strand, 14328436 - 14328379
Alignment:
Q  7 agagagaaagttgtcacaaaaattattagaaaatgattgtacaaatatcacttctcta 64  Q
    ||||| ||||||||||||||| || |||||||||  ||||||| |||||| |||||||    
T  14328436 agagaaaaagttgtcacaaaagttgttagaaaattgttgtacatatatcatttctcta 14328379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 7 - 56
Target Start/End: Complemental strand, 16799727 - 16799678
Alignment:
Q  7 agagagaaagttgtcacaaaaattattagaaaatgattgtacaaatatca 56  Q
    |||||||||||| ||||||||||| |||| |||||  |||||||||||||    
T  16799727 agagagaaagttatcacaaaaattgttaggaaatggatgtacaaatatca 16799678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 7 - 64
Target Start/End: Original strand, 36191038 - 36191095
Alignment:
Q  7 agagagaaagttgtcacaaaaattattagaaaatgattgtacaaatatcacttctcta 64  Q
    |||||||||||||||| |||| |||||| |||||  ||| |||||||||| |||||||    
T  36191038 agagagaaagttgtcataaaagttattataaaatcgttgcacaaatatcatttctcta 36191095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 7 - 64
Target Start/End: Complemental strand, 43057119 - 43057062
Alignment:
Q  7 agagagaaagttgtcacaaaaattattagaaaatgattgtacaaatatcacttctcta 64  Q
    ||||||||||||||||||||| || ||| ||| || |||| ||||||||| |||||||    
T  43057119 agagagaaagttgtcacaaaagttgttaaaaagtggttgttcaaatatcatttctcta 43057062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 11 - 64
Target Start/End: Complemental strand, 45420186 - 45420133
Alignment:
Q  11 agaaagttgtcacaaaaattattagaaaatgattgtacaaatatcacttctcta 64  Q
    |||||||| ||| ||||||||||| |||||| |||||||||||||  |||||||    
T  45420186 agaaagttatcataaaaattattaaaaaatggttgtacaaatatcgtttctcta 45420133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 41; Significance: 0.00000000000008; HSPs: 40)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 7 - 63
Target Start/End: Original strand, 67177 - 67233
Alignment:
Q  7 agagagaaagttgtcacaaaaattattagaaaatgattgtacaaatatcacttctct 63  Q
    ||||||||||||||||||||| || |||||||||| |||||||||||||| ||||||    
T  67177 agagagaaagttgtcacaaaagttgttagaaaatggttgtacaaatatcatttctct 67233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 7 - 63
Target Start/End: Complemental strand, 35792124 - 35792068
Alignment:
Q  7 agagagaaagttgtcacaaaaattattagaaaatgattgtacaaatatcacttctct 63  Q
    ||||||||||||||||||||| || ||| ||||||||||||||||||||| ||||||    
T  35792124 agagagaaagttgtcacaaaagtttttaaaaaatgattgtacaaatatcatttctct 35792068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 7 - 63
Target Start/End: Original strand, 43285979 - 43286035
Alignment:
Q  7 agagagaaagttgtcacaaaaattattagaaaatgattgtacaaatatcacttctct 63  Q
    ||||||||||||||||||||| ||||||||||||| |||| ||||||||| ||||||    
T  43285979 agagagaaagttgtcacaaaagttattagaaaatggttgtccaaatatcatttctct 43286035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 7 - 62
Target Start/End: Original strand, 25830262 - 25830317
Alignment:
Q  7 agagagaaagttgtcacaaaaattattagaaaatgattgtacaaatatcacttctc 62  Q
    ||||||||||||||||||||| || |||||||||| |||||||||||||| |||||    
T  25830262 agagagaaagttgtcacaaaagttgttagaaaatggttgtacaaatatcatttctc 25830317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 7 - 62
Target Start/End: Original strand, 42786676 - 42786731
Alignment:
Q  7 agagagaaagttgtcacaaaaattattagaaaatgattgtacaaatatcacttctc 62  Q
    |||||||||||||||||||||||| | |||||||| |||||||||||||| |||||    
T  42786676 agagagaaagttgtcacaaaaattgtaagaaaatggttgtacaaatatcatttctc 42786731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 7 - 63
Target Start/End: Complemental strand, 43715929 - 43715874
Alignment:
Q  7 agagagaaagttgtcacaaaaattattagaaaatgattgtacaaatatcacttctct 63  Q
    ||||||||||||||||||||| || |||||||||| |||||||||||||| ||||||    
T  43715929 agagagaaagttgtcacaaaagtt-ttagaaaatggttgtacaaatatcatttctct 43715874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 7 - 62
Target Start/End: Original strand, 10644818 - 10644873
Alignment:
Q  7 agagagaaagttgtcacaaaaattattagaaaatgattgtacaaatatcacttctc 62  Q
    ||||||||||||||||||||| || ||| |||||| |||||||||||||| |||||    
T  10644818 agagagaaagttgtcacaaaagttgttacaaaatggttgtacaaatatcatttctc 10644873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 7 - 62
Target Start/End: Complemental strand, 28756590 - 28756535
Alignment:
Q  7 agagagaaagttgtcacaaaaattattagaaaatgattgtacaaatatcacttctc 62  Q
    ||||| ||| |||||||||||||||||| |||||||||| |||||||||| |||||    
T  28756590 agagataaaattgtcacaaaaattattataaaatgattgcacaaatatcatttctc 28756535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 7 - 62
Target Start/End: Complemental strand, 31806353 - 31806299
Alignment:
Q  7 agagagaaagttgtcacaaaaattattagaaaatgattgtacaaatatcacttctc 62  Q
    |||||||||||||||| ||||||| |||||||||| |||||||||||||| |||||    
T  31806353 agagagaaagttgtca-aaaaattgttagaaaatggttgtacaaatatcatttctc 31806299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 13 - 63
Target Start/End: Complemental strand, 45405580 - 45405530
Alignment:
Q  13 aaagttgtcacaaaaattattagaaaatgattgtacaaatatcacttctct 63  Q
    |||||||||||||||||||||| |||||| ||||||| |||||| ||||||    
T  45405580 aaagttgtcacaaaaattattaaaaaatggttgtacatatatcatttctct 45405530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 7 - 64
Target Start/End: Original strand, 9550424 - 9550480
Alignment:
Q  7 agagagaaagttgtcacaaaaattattagaaaatgattgtacaaatatcacttctcta 64  Q
    |||||||||||||||| |||| || |||||||||||||| |||||||||| |||||||    
T  9550424 agagagaaagttgtca-aaaagttgttagaaaatgattggacaaatatcatttctcta 9550480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 9 - 62
Target Start/End: Original strand, 23754725 - 23754778
Alignment:
Q  9 agagaaagttgtcacaaaaattattagaaaatgattgtacaaatatcacttctc 62  Q
    ||||||||||||||||||| |||||| |||||| |||| ||||||||| |||||    
T  23754725 agagaaagttgtcacaaaagttattaaaaaatggttgttcaaatatcatttctc 23754778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 7 - 56
Target Start/End: Complemental strand, 35345475 - 35345426
Alignment:
Q  7 agagagaaagttgtcacaaaaattattagaaaatgattgtacaaatatca 56  Q
    |||||||| ||| ||||||||||||||| |||||| ||||||||||||||    
T  35345475 agagagaaggttatcacaaaaattattacaaaatggttgtacaaatatca 35345426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 7 - 64
Target Start/End: Complemental strand, 38675658 - 38675601
Alignment:
Q  7 agagagaaagttgtcacaaaaattattagaaaatgattgtacaaatatcacttctcta 64  Q
    |||||||||||||||| |||||||||   |||||| |||||||||||||| |||||||    
T  38675658 agagagaaagttgtcataaaaattatagaaaaatggttgtacaaatatcatttctcta 38675601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 7 - 64
Target Start/End: Original strand, 42619993 - 42620050
Alignment:
Q  7 agagagaaagttgtcacaaaaattattagaaaatgattgtacaaatatcacttctcta 64  Q
    ||||||||| ||||||||||| || ||||||||||  ||||||||||||| |||||||    
T  42619993 agagagaaatttgtcacaaaagttgttagaaaatggatgtacaaatatcatttctcta 42620050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 7 - 63
Target Start/End: Original strand, 9431302 - 9431357
Alignment:
Q  7 agagagaaagttgtcacaaaaattattagaaaatgattgtacaaatatcacttctct 63  Q
    |||||||||||||||| ||||||| ||||||| |||||||||||| |||| ||||||    
T  9431302 agagagaaagttgtca-aaaaattgttagaaattgattgtacaaagatcatttctct 9431357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 7 - 63
Target Start/End: Complemental strand, 10692493 - 10692438
Alignment:
Q  7 agagagaaagttgtcacaaaaattattagaaaatgattgtacaaatatcacttctct 63  Q
    ||||| ||||||||||||||||||| || ||||||||||| ||||||||| ||||||    
T  10692493 agagataaagttgtcacaaaaatta-taaaaaatgattgttcaaatatcatttctct 10692438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 9 - 65
Target Start/End: Original strand, 12339176 - 12339232
Alignment:
Q  9 agagaaagttgtcacaaaaattattagaaaatgattgtacaaatatcacttctctac 65  Q
    ||||||| |||||| |||| |||||| ||||||||||||||||||||  ||||||||    
T  12339176 agagaaaattgtcataaaatttattaaaaaatgattgtacaaatatcgtttctctac 12339232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 7 - 63
Target Start/End: Complemental strand, 13970974 - 13970918
Alignment:
Q  7 agagagaaagttgtcacaaaaattattagaaaatgattgtacaaatatcacttctct 63  Q
    ||||||||||||||||||||| || |||| |||||  ||||||||||||| ||||||    
T  13970974 agagagaaagttgtcacaaaagttgttaggaaatggatgtacaaatatcatttctct 13970918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 7 - 63
Target Start/End: Original strand, 33100485 - 33100541
Alignment:
Q  7 agagagaaagttgtcacaaaaattattagaaaatgattgtacaaatatcacttctct 63  Q
    ||||||||||||||||||||| || ||| |||||| |||| ||||||||| ||||||    
T  33100485 agagagaaagttgtcacaaaagttgttataaaatggttgttcaaatatcatttctct 33100541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 7 - 63
Target Start/End: Complemental strand, 35067215 - 35067159
Alignment:
Q  7 agagagaaagttgtcacaaaaattattagaaaatgattgtacaaatatcacttctct 63  Q
    ||||||||||||||||||||| || |||  ||||| |||||||||||||| ||||||    
T  35067215 agagagaaagttgtcacaaaagttgttaagaaatggttgtacaaatatcatttctct 35067159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 7 - 63
Target Start/End: Complemental strand, 35818991 - 35818936
Alignment:
Q  7 agagagaaagttgtcacaaaaattattagaaaatgattgtacaaatatcacttctct 63  Q
    |||||||||||||||| ||||||| |||||||||| |||| ||||||||| ||||||    
T  35818991 agagagaaagttgtca-aaaaattgttagaaaatggttgtgcaaatatcatttctct 35818936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 7 - 54
Target Start/End: Original strand, 3270895 - 3270942
Alignment:
Q  7 agagagaaagttgtcacaaaaattattagaaaatgattgtacaaatat 54  Q
    ||||||||||||||||||||| || | || ||||||||||||||||||    
T  3270895 agagagaaagttgtcacaaaagttgtaaggaaatgattgtacaaatat 3270942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 7 - 62
Target Start/End: Original strand, 7777196 - 7777251
Alignment:
Q  7 agagagaaagttgtcacaaaaattattagaaaatgattgtacaaatatcacttctc 62  Q
    |||||||||||||||||||||||| ||| ||||| ||| || |||||||| |||||    
T  7777196 agagagaaagttgtcacaaaaattgttaaaaaattattctagaaatatcatttctc 7777251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 7 - 62
Target Start/End: Original strand, 14548840 - 14548894
Alignment:
Q  7 agagagaaagttgtcacaaaaattattagaaaatgattgtacaaatatcacttctc 62  Q
    |||||||||||||||  ||||||||||| |||||| |||||||||||||| |||||    
T  14548840 agagagaaagttgtct-aaaaattattaaaaaatggttgtacaaatatcatttctc 14548894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 13 - 56
Target Start/End: Original strand, 36805146 - 36805189
Alignment:
Q  13 aaagttgtcacaaaaattattagaaaatgattgtacaaatatca 56  Q
    ||||||||||||||| ||||||  ||||||||||||||||||||    
T  36805146 aaagttgtcacaaaagttattatcaaatgattgtacaaatatca 36805189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 16 - 54
Target Start/End: Complemental strand, 2261519 - 2261481
Alignment:
Q  16 gttgtcacaaaaattattagaaaatgattgtacaaatat 54  Q
    |||||||||||| |||||| |||||||||||||||||||    
T  2261519 gttgtcacaaaagttattaaaaaatgattgtacaaatat 2261481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 11 - 61
Target Start/End: Complemental strand, 10128692 - 10128642
Alignment:
Q  11 agaaagttgtcacaaaaattattagaaaatgattgtacaaatatcacttct 61  Q
    |||||||||| ||||||||||||| ||||| ||||| ||||||||| ||||    
T  10128692 agaaagttgttacaaaaattattataaaattattgttcaaatatcaattct 10128642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 7 - 61
Target Start/End: Original strand, 10592297 - 10592351
Alignment:
Q  7 agagagaaagttgtcacaaaaattattagaaaatgattgtacaaatatcacttct 61  Q
    ||||||||||||||||||||| |||| | |||||||||||| | |||||| ||||    
T  10592297 agagagaaagttgtcacaaaagttatcaaaaaatgattgtaaagatatcatttct 10592351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 7 - 61
Target Start/End: Complemental strand, 44061772 - 44061718
Alignment:
Q  7 agagagaaagttgtcacaaaaattattagaaaatgattgtacaaatatcacttct 61  Q
    ||||||||||||||||||||| |||| | |||||| |||| ||||||||| ||||    
T  44061772 agagagaaagttgtcacaaaagttatcaaaaaatggttgttcaaatatcatttct 44061718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 7 - 64
Target Start/End: Original strand, 1158352 - 1158408
Alignment:
Q  7 agagagaaagttgtcacaaaaattattagaaaatgattgtacaaatatcacttctcta 64  Q
    ||||||||||||||  ||||| |||||||||| || |||||||||||||| |||||||    
T  1158352 agagagaaagttgtt-caaaagttattagaaattggttgtacaaatatcatttctcta 1158408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 7 - 64
Target Start/End: Complemental strand, 3650167 - 3650111
Alignment:
Q  7 agagagaaagttgtcacaaaaattattagaaaatgattgtacaaatatcacttctcta 64  Q
    |||||||||||||| | ||||||||||| ||| || |||||||||||||| |||||||    
T  3650167 agagagaaagttgtta-aaaaattattacaaattggttgtacaaatatcatttctcta 3650111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 11 - 64
Target Start/End: Complemental strand, 6972206 - 6972153
Alignment:
Q  11 agaaagttgtcacaaaaattattagaaaatgattgtacaaatatcacttctcta 64  Q
    ||||||||||||||||| || |||  |||||| ||||||||||||| |||||||    
T  6972206 agaaagttgtcacaaaagttgttaagaaatgactgtacaaatatcatttctcta 6972153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 9 - 62
Target Start/End: Complemental strand, 20473831 - 20473779
Alignment:
Q  9 agagaaagttgtcacaaaaattattagaaaatgattgtacaaatatcacttctc 62  Q
    |||||||||||||| ||||||| ||| |||||| |||||||||||||| |||||    
T  20473831 agagaaagttgtca-aaaaattgttataaaatggttgtacaaatatcatttctc 20473779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 7 - 56
Target Start/End: Complemental strand, 28756716 - 28756667
Alignment:
Q  7 agagagaaagttgtcacaaaaattattagaaaatgattgtacaaatatca 56  Q
    ||||| ||| |||||||||||||||||| |||||||||| | ||||||||    
T  28756716 agagataaaattgtcacaaaaattattataaaatgattgcataaatatca 28756667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 7 - 64
Target Start/End: Complemental strand, 34970261 - 34970205
Alignment:
Q  7 agagagaaagttgtcacaaaaattattagaaaatgattgtacaaatatcacttctcta 64  Q
    |||||||||||||||| |||| || ||| |||| |||||||||||||||| |||||||    
T  34970261 agagagaaagttgtca-aaaagttgttacaaaaggattgtacaaatatcatttctcta 34970205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 13 - 62
Target Start/End: Complemental strand, 35153064 - 35153015
Alignment:
Q  13 aaagttgtcacaaaaattattagaaaatgattgtacaaatatcacttctc 62  Q
    |||||||| ||||||||| ||| ||||||||||| ||||||||| |||||    
T  35153064 aaagttgtaacaaaaattgttacaaaatgattgttcaaatatcatttctc 35153015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 11 - 56
Target Start/End: Original strand, 36637800 - 36637845
Alignment:
Q  11 agaaagttgtcacaaaaattattagaaaatgattgtacaaatatca 56  Q
    |||| ||||||||||||||||| |  ||||||||||||||||||||    
T  36637800 agaaggttgtcacaaaaattatcaccaaatgattgtacaaatatca 36637845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 15 - 64
Target Start/End: Complemental strand, 40649497 - 40649448
Alignment:
Q  15 agttgtcacaaaaattattagaaaatgattgtacaaatatcacttctcta 64  Q
    |||||||||||||||| ||| ||||||| ||| ||||||||| |||||||    
T  40649497 agttgtcacaaaaattgttaaaaaatgaatgttcaaatatcatttctcta 40649448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 7 - 56
Target Start/End: Complemental strand, 43186350 - 43186302
Alignment:
Q  7 agagagaaagttgtcacaaaaattattagaaaatgattgtacaaatatca 56  Q
    |||||||||||||| ||||||||||| | ||||| |||||||||||||||    
T  43186350 agagagaaagttgt-acaaaaattatcacaaaataattgtacaaatatca 43186302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0178 (Bit Score: 38; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0178
Description:

Target: scaffold0178; HSP #1
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 9 - 62
Target Start/End: Complemental strand, 9829 - 9776
Alignment:
Q  9 agagaaagttgtcacaaaaattattagaaaatgattgtacaaatatcacttctc 62  Q
    |||||||||||||||||||||||| | |||||| |||||||||||||| |||||    
T  9829 agagaaagttgtcacaaaaattataaaaaaatggttgtacaaatatcatttctc 9776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 38; Significance: 0.000000000005; HSPs: 20)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 7 - 56
Target Start/End: Original strand, 34570611 - 34570660
Alignment:
Q  7 agagagaaagttgtcacaaaaattattagaaaatgattgtacaaatatca 56  Q
    ||||||||||||||||||||| |||||| |||||| ||||||||||||||    
T  34570611 agagagaaagttgtcacaaaagttattacaaaatggttgtacaaatatca 34570660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 7 - 63
Target Start/End: Original strand, 2242038 - 2242094
Alignment:
Q  7 agagagaaagttgtcacaaaaattattagaaaatgattgtacaaatatcacttctct 63  Q
    |||||||||||||||||||||||| | | ||||||||||| ||||||||| ||||||    
T  2242038 agagagaaagttgtcacaaaaattgtcaaaaaatgattgttcaaatatcatttctct 2242094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 11 - 63
Target Start/End: Original strand, 16368067 - 16368119
Alignment:
Q  11 agaaagttgtcacaaaaattattagaaaatgattgtacaaatatcacttctct 63  Q
    |||||||||| ||||||||||||| |||||| |||||||||||||| ||||||    
T  16368067 agaaagttgttacaaaaattattataaaatggttgtacaaatatcatttctct 16368119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 7 - 54
Target Start/End: Complemental strand, 1376419 - 1376372
Alignment:
Q  7 agagagaaagttgtcacaaaaattattagaaaatgattgtacaaatat 54  Q
    ||||||||||||||||||||| || |||||||||| ||||||||||||    
T  1376419 agagagaaagttgtcacaaaagttgttagaaaatggttgtacaaatat 1376372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 7 - 54
Target Start/End: Complemental strand, 1384167 - 1384120
Alignment:
Q  7 agagagaaagttgtcacaaaaattattagaaaatgattgtacaaatat 54  Q
    ||||||||||||||||||||| || |||||||||| ||||||||||||    
T  1384167 agagagaaagttgtcacaaaagttgttagaaaatggttgtacaaatat 1384120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 6 - 72
Target Start/End: Original strand, 25127848 - 25127914
Alignment:
Q  6 cagagagaaagttgtcacaaaaattattagaaaatgattgtacaaatatcacttctctacattatat 72  Q
    ||||||||||||| |||||||| || ||| |||||| |||||||||||||| ||||||  |||||||    
T  25127848 cagagagaaagttttcacaaaagttgttacaaaatggttgtacaaatatcatttctctttattatat 25127914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 7 - 63
Target Start/End: Original strand, 8505790 - 8505846
Alignment:
Q  7 agagagaaagttgtcacaaaaattattagaaaatgattgtacaaatatcacttctct 63  Q
    ||||||||||||||||||||| || | | ||||||||||| ||||||||| ||||||    
T  8505790 agagagaaagttgtcacaaaagttgtcaaaaaatgattgttcaaatatcatttctct 8505846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 7 - 63
Target Start/End: Original strand, 16337939 - 16337995
Alignment:
Q  7 agagagaaagttgtcacaaaaattattagaaaatgattgtacaaatatcacttctct 63  Q
    |||||||||||||| |||||| |||||| |||||| |||||| ||||||| ||||||    
T  16337939 agagagaaagttgttacaaaagttattataaaatggttgtaccaatatcatttctct 16337995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 7 - 63
Target Start/End: Complemental strand, 33651075 - 33651019
Alignment:
Q  7 agagagaaagttgtcacaaaaattattagaaaatgattgtacaaatatcacttctct 63  Q
    |||||||||||||||||||||||||||| |||||   ||| ||||||||| ||||||    
T  33651075 agagagaaagttgtcacaaaaattattacaaaatagatgttcaaatatcatttctct 33651019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 7 - 62
Target Start/End: Original strand, 11635551 - 11635606
Alignment:
Q  7 agagagaaagttgtcacaaaaattattagaaaatgattgtacaaatatcacttctc 62  Q
    ||||||||||||||||||||| || | | ||||||||||| ||||||||| |||||    
T  11635551 agagagaaagttgtcacaaaagttgtcaaaaaatgattgttcaaatatcatttctc 11635606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 7 - 62
Target Start/End: Original strand, 16743283 - 16743337
Alignment:
Q  7 agagagaaagttgtcacaaaaattattagaaaatgattgtacaaatatcacttctc 62  Q
    |||||||||||||||  ||||||||||| |||||| |||||||||||||| |||||    
T  16743283 agagagaaagttgtct-aaaaattattaaaaaatggttgtacaaatatcatttctc 16743337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 7 - 62
Target Start/End: Complemental strand, 27102169 - 27102115
Alignment:
Q  7 agagagaaagttgtcacaaaaattattagaaaatgattgtacaaatatcacttctc 62  Q
    ||||| ||| |||||| |||||||||||||||||| |||||||||||||| |||||    
T  27102169 agagaaaaaattgtca-aaaaattattagaaaatggttgtacaaatatcatttctc 27102115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 7 - 62
Target Start/End: Complemental strand, 27143991 - 27143937
Alignment:
Q  7 agagagaaagttgtcacaaaaattattagaaaatgattgtacaaatatcacttctc 62  Q
    ||||| ||| |||||| |||||||||||||||||| |||||||||||||| |||||    
T  27143991 agagaaaaaattgtca-aaaaattattagaaaatggttgtacaaatatcatttctc 27143937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 7 - 62
Target Start/End: Complemental strand, 31077847 - 31077793
Alignment:
Q  7 agagagaaagttgtcacaaaaattattagaaaatgattgtacaaatatcacttctc 62  Q
    ||||||||||||||||||||| ||| || ||||||||||| ||||||||| |||||    
T  31077847 agagagaaagttgtcacaaaattta-taaaaaatgattgttcaaatatcatttctc 31077793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 9 - 63
Target Start/End: Complemental strand, 16336881 - 16336827
Alignment:
Q  9 agagaaagttgtcacaaaaattattagaaaatgattgtacaaatatcacttctct 63  Q
    |||| ||||||||| ||||||||||||||| || |||| ||||||||| ||||||    
T  16336881 agaggaagttgtcataaaaattattagaaagtggttgttcaaatatcatttctct 16336827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 7 - 49
Target Start/End: Complemental strand, 28630153 - 28630111
Alignment:
Q  7 agagagaaagttgtcacaaaaattattagaaaatgattgtaca 49  Q
    ||||||||||||||||||||||||| || |||||| |||||||    
T  28630153 agagagaaagttgtcacaaaaattactataaaatggttgtaca 28630111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 7 - 56
Target Start/End: Original strand, 3049547 - 3049595
Alignment:
Q  7 agagagaaagttgtcacaaaaattattagaaaatgattgtacaaatatca 56  Q
    |||||||||||||| | |||| || |||||||||||||||||||||||||    
T  3049547 agagagaaagttgtga-aaaagttgttagaaaatgattgtacaaatatca 3049595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 7 - 64
Target Start/End: Complemental strand, 3199015 - 3198958
Alignment:
Q  7 agagagaaagttgtcacaaaaattattagaaaatgattgtacaaatatcacttctcta 64  Q
    |||||||||||||||| ||||||||| |  |||||| ||| ||||||||| |||||||    
T  3199015 agagagaaagttgtcataaaaattatcaccaaatgaatgttcaaatatcatttctcta 3198958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 15 - 64
Target Start/End: Original strand, 7636452 - 7636501
Alignment:
Q  15 agttgtcacaaaaattattagaaaatgattgtacaaatatcacttctcta 64  Q
    |||||||  |||| |||||| ||||||||||||||||||||| |||||||    
T  7636452 agttgtccaaaaagttattataaaatgattgtacaaatatcatttctcta 7636501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 7 - 56
Target Start/End: Original strand, 25142567 - 25142616
Alignment:
Q  7 agagagaaagttgtcacaaaaattattagaaaatgattgtacaaatatca 56  Q
    ||||||||| |||||||||||||| ||| |||||||| || |||||||||    
T  25142567 agagagaaaattgtcacaaaaattgttataaaatgatcgtccaaatatca 25142616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053 (Bit Score: 37; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 7 - 63
Target Start/End: Complemental strand, 12552 - 12496
Alignment:
Q  7 agagagaaagttgtcacaaaaattattagaaaatgattgtacaaatatcacttctct 63  Q
    |||||||||||||||||||||||| |||||||||| || |||||| |||| ||||||    
T  12552 agagagaaagttgtcacaaaaattgttagaaaatggttatacaaagatcatttctct 12496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 37; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 7 - 55
Target Start/End: Original strand, 469654 - 469702
Alignment:
Q  7 agagagaaagttgtcacaaaaattattagaaaatgattgtacaaatatc 55  Q
    |||||||||||||||||||||||||| | |||||| |||||||||||||    
T  469654 agagagaaagttgtcacaaaaattatcaaaaaatggttgtacaaatatc 469702  T

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Target: scaffold0662 (Bit Score: 36; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0662
Description:

Target: scaffold0662; HSP #1
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 9 - 64
Target Start/End: Complemental strand, 1199 - 1144
Alignment:
Q  9 agagaaagttgtcacaaaaattattagaaaatgattgtacaaatatcacttctcta 64  Q
    ||||||||||||||||||| || |||| |||| ||||||||||||||| |||||||    
T  1199 agagaaagttgtcacaaaagttgttaggaaataattgtacaaatatcatttctcta 1144  T

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Target: scaffold0201 (Bit Score: 36; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0201
Description:

Target: scaffold0201; HSP #1
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 7 - 62
Target Start/End: Complemental strand, 8527 - 8472
Alignment:
Q  7 agagagaaagttgtcacaaaaattattagaaaatgattgtacaaatatcacttctc 62  Q
    |||||||||||||||| ||||||| ||| ||||||||||| ||||||||| |||||    
T  8527 agagagaaagttgtcataaaaattgttaaaaaatgattgttcaaatatcatttctc 8472  T

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Target: scaffold0432 (Bit Score: 35; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0432
Description:

Target: scaffold0432; HSP #1
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 7 - 65
Target Start/End: Original strand, 6536 - 6594
Alignment:
Q  7 agagagaaagttgtcacaaaaattattagaaaatgattgtacaaatatcacttctctac 65  Q
    ||||| ||||||||||||||| || ||| ||||||||||| ||||||||| ||||||||    
T  6536 agagataaagttgtcacaaaagttgttaaaaaatgattgttcaaatatcatttctctac 6594  T

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Target: scaffold1956 (Bit Score: 33; Significance: 0.000000005; HSPs: 1)
Name: scaffold1956
Description:

Target: scaffold1956; HSP #1
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 8 - 64
Target Start/End: Complemental strand, 825 - 769
Alignment:
Q  8 gagagaaagttgtcacaaaaattattagaaaatgattgtacaaatatcacttctcta 64  Q
    ||||||||||||||||||||||||| | ||||||  ||| ||||||||| |||||||    
T  825 gagagaaagttgtcacaaaaattatcaaaaaatggatgttcaaatatcatttctcta 769  T

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Target: scaffold0003 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 7 - 62
Target Start/End: Complemental strand, 366348 - 366294
Alignment:
Q  7 agagagaaagttgtcacaaaaattattagaaaatgattgtacaaatatcacttctc 62  Q
    ||||||||||||||||||||| || ||| |||||| |||||||||||||| |||||    
T  366348 agagagaaagttgtcacaaaagttgtta-aaaatggttgtacaaatatcatttctc 366294  T

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Target: scaffold0154 (Bit Score: 30; Significance: 0.0000003; HSPs: 1)
Name: scaffold0154
Description:

Target: scaffold0154; HSP #1
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 7 - 64
Target Start/End: Original strand, 9865 - 9921
Alignment:
Q  7 agagagaaagttgtcacaaaaattattagaaaatgattgtacaaatatcacttctcta 64  Q
    ||||||||| |||||| ||||||| | | ||||||||||||||||||||| |||||||    
T  9865 agagagaaaattgtca-aaaaattgtgaaaaaatgattgtacaaatatcatttctcta 9921  T

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