View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5899_high_12 (Length: 218)
Name: NF5899_high_12
Description: NF5899
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5899_high_12 |
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Alignment Details
Target: chr3 (Bit Score: 187; Significance: 1e-101; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 18 - 212
Target Start/End: Complemental strand, 26493315 - 26493121
Alignment:
| Q |
18 |
tcaccttcacctttacctgtgatatcaccttcccctacagttctatctacaccaccacattctagttggatttctgcaccttccccagctccatcttcaa |
117 |
Q |
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| T |
26493315 |
tcaccttcaccttcacctgtgatatcaccttcccctacagttctatctacaccaccacattctagttggatttctgcaccttccccagctccatcttcaa |
26493216 |
T |
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| Q |
118 |
accaaatgaattcacaaagttcaaacccaaagcatcattctgttgttatatggtcaacagttggaggcttctcattccttgttttggtgtcattc |
212 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |
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| T |
26493215 |
accaaatgaattcacaaagttcaaacccaaagcatcattctgttgttatatggtcaacagttggaggattctcattccttgttttggtgtcattc |
26493121 |
T |
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