View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5899_high_4 (Length: 275)
Name: NF5899_high_4
Description: NF5899
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5899_high_4 |
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Alignment Details
Target: chr8 (Bit Score: 251; Significance: 1e-139; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 251; E-Value: 1e-139
Query Start/End: Original strand, 6 - 260
Target Start/End: Complemental strand, 34953573 - 34953319
Alignment:
| Q |
6 |
aggttgcaaacgtgagaacaaacgacgaggtgcaagaactgggaagatttgcggtggaggagtataaccggagtgtgaagatatggaaggaaggggaagg |
105 |
Q |
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| T |
34953573 |
aggttgcaaacgtgagaacaaacgacgaggtgcaagaactgggaagatttgcggtggaggagtataaccggagtgtgaagatatggaaggaaggggaagg |
34953474 |
T |
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| Q |
106 |
agagttaaggtttgttgaagtggtggaggcgcaacaacaagtagtttctgggatcaaatactatatgaagatatgggttacacaagcgaagagtgatggt |
205 |
Q |
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| T |
34953473 |
agagttaaggtttgtggaagtggtggaggcgcaacaacaagtagtttctgggatcaaatactatatgaagatatgggttacacaagcgaagagtgatggt |
34953374 |
T |
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| Q |
206 |
gttggagatccaacaatgtttgattcagtggtgcttgttaagccatggctgaatt |
260 |
Q |
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| T |
34953373 |
gttggagatccaacaatgtttgattcagtggtgcttgttaagccatggctgaatt |
34953319 |
T |
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