View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5899_high_7 (Length: 251)
Name: NF5899_high_7
Description: NF5899
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5899_high_7 |
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Alignment Details
Target: chr8 (Bit Score: 165; Significance: 2e-88; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 165; E-Value: 2e-88
Query Start/End: Original strand, 1 - 234
Target Start/End: Original strand, 43970153 - 43970400
Alignment:
| Q |
1 |
aactacactacactgaagtggcaatagagagacgtaagtaaagaaggagactgtggtggccaatgaacgacacactacaaagctacgttgacggt----- |
95 |
Q |
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| T |
43970153 |
aactacactacactgaagtggcaatagagagacgtaaataaagaaggagactg--gtggccaatgaacgacgcactacaaagctacgttgacggttgcat |
43970250 |
T |
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| Q |
96 |
----------acaatc-tctgattccctatttctttaaggaattctcacattgtttgcttccaatctctcacttaatctcacacactaattacaatgatt |
184 |
Q |
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|||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
43970251 |
tgttgacggtacaaacctctgattccctatttctttaaggaattctcacattgtttgcttccaatctctcacttaatctcacacactaattacaatgatt |
43970350 |
T |
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| Q |
185 |
cctaattatagagttgtcactttgattcatcgtatttattttcccattct |
234 |
Q |
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|||||||||||||||||||||||||||||||||||||||||| ||||||| |
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| T |
43970351 |
cctaattatagagttgtcactttgattcatcgtatttatttttccattct |
43970400 |
T |
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