View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5901_low_12 (Length: 202)
Name: NF5901_low_12
Description: NF5901
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5901_low_12 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 187; Significance: 1e-101; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 16 - 202
Target Start/End: Original strand, 44563273 - 44563459
Alignment:
| Q |
16 |
ataaatgagttccaccggaatcgagaaatacgctagcgcgataagaacgtcggagatgtattgatacttgacaagaagttcatctgggggataaggcgtg |
115 |
Q |
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| T |
44563273 |
ataaatgagttccaccggaatcgagaaatacgctagcgcgataagaacgtcggagatgtattgatacttgacaagaagttcatctgggggataaggcgtg |
44563372 |
T |
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| Q |
116 |
tcaatacactcgcaagactccatcatctaacacccccacatgaaaggatctgtaaaagcaacatagcataggttgtcatcacgggtt |
202 |
Q |
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| T |
44563373 |
tcaatacactcgcaagactccatcatctaacacccccacatgaaaggatctgtaaaagcaacatagcataggttgtcatcacgggtt |
44563459 |
T |
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