View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5903-Insertion-6 (Length: 205)
Name: NF5903-Insertion-6
Description: NF5903
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5903-Insertion-6 |
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| [»] chr8 (2 HSPs) |
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Alignment Details
Target: chr8 (Bit Score: 127; Significance: 9e-66; HSPs: 2)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 127; E-Value: 9e-66
Query Start/End: Original strand, 71 - 205
Target Start/End: Complemental strand, 35018833 - 35018699
Alignment:
| Q |
71 |
cattatataataaaattttccattagaacttttgttagtaatagtataccattattactgagacatattaaagctaatgatgttgacttttggaagggtt |
170 |
Q |
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| T |
35018833 |
cattaaataataaaattttccatgagaacttttgttagtaatagtataccattattactgagacatattaaagctaatgatgttgacttttggaagggtt |
35018734 |
T |
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| Q |
171 |
gtcatgttttttgaacctctcacggatcttgtttt |
205 |
Q |
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| T |
35018733 |
gtcatgttttttgaacctctcacggatcttgtttt |
35018699 |
T |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 44 - 78
Target Start/End: Complemental strand, 35018874 - 35018840
Alignment:
| Q |
44 |
taaaatatgaatgaatatacttcatcacattatat |
78 |
Q |
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| T |
35018874 |
taaaatatgaatgaatatacttcatcacattatat |
35018840 |
T |
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