View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF5903_high_2 (Length: 448)

Name: NF5903_high_2
Description: NF5903
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF5903_high_2
NF5903_high_2
[»] chr6 (6 HSPs)
chr6 (1-406)||(3824844-3825258)
chr6 (5-85)||(3838443-3838518)
chr6 (145-188)||(21813902-21813945)
chr6 (145-194)||(30747624-30747673)
chr6 (147-209)||(16388647-16388709)
chr6 (149-197)||(17835225-17835273)
[»] chr4 (7 HSPs)
chr4 (149-210)||(44124103-44124164)
chr4 (145-205)||(44441192-44441251)
chr4 (158-209)||(26413890-26413941)
chr4 (145-193)||(13502621-13502669)
chr4 (145-209)||(34226555-34226619)
chr4 (145-197)||(37433787-37433839)
chr4 (145-189)||(52934388-52934432)
[»] chr3 (4 HSPs)
chr3 (145-209)||(42314174-42314238)
chr3 (145-210)||(52259345-52259410)
chr3 (145-208)||(32899641-32899703)
chr3 (163-209)||(29675562-29675608)
[»] chr8 (4 HSPs)
chr8 (145-209)||(13206837-13206901)
chr8 (151-209)||(45219633-45219691)
chr8 (145-197)||(9048110-9048162)
chr8 (147-196)||(30856043-30856092)
[»] chr1 (5 HSPs)
chr1 (145-209)||(328319-328383)
chr1 (145-209)||(26087028-26087092)
chr1 (163-208)||(8740177-8740222)
chr1 (145-194)||(13684268-13684317)
chr1 (145-197)||(13874064-13874116)
[»] chr7 (8 HSPs)
chr7 (145-205)||(15013724-15013784)
chr7 (145-191)||(15037210-15037256)
chr7 (145-187)||(41162748-41162790)
chr7 (147-191)||(30588130-30588174)
chr7 (145-179)||(27247898-27247932)
chr7 (145-194)||(22886699-22886748)
chr7 (145-194)||(32097599-32097648)
chr7 (152-188)||(9376726-9376762)
[»] chr5 (4 HSPs)
chr5 (145-209)||(11891987-11892051)
chr5 (145-189)||(4524085-4524129)
chr5 (145-190)||(26188269-26188314)
chr5 (144-194)||(32940248-32940298)
[»] chr2 (5 HSPs)
chr2 (145-209)||(18961472-18961536)
chr2 (150-194)||(6452109-6452153)
chr2 (149-210)||(7670261-7670322)
chr2 (161-194)||(35984858-35984891)
chr2 (145-194)||(36072448-36072497)
[»] scaffold0444 (1 HSPs)
scaffold0444 (145-205)||(6005-6064)
[»] scaffold0039 (1 HSPs)
scaffold0039 (145-209)||(93516-93579)
[»] scaffold0406 (1 HSPs)
scaffold0406 (145-194)||(8371-8420)
[»] scaffold0006 (1 HSPs)
scaffold0006 (145-194)||(109387-109436)
[»] scaffold0285 (1 HSPs)
scaffold0285 (145-209)||(14029-14093)


Alignment Details
Target: chr6 (Bit Score: 273; Significance: 1e-152; HSPs: 6)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 273; E-Value: 1e-152
Query Start/End: Original strand, 1 - 406
Target Start/End: Complemental strand, 3825258 - 3824844
Alignment:
Q  1 tctctatatgatcattcatatcatgtcatgtcaaatttgtaatggctctccttaaatataaatatttatgaatttcgataaggttttgcagctgcaccta 100  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||| |||||||||    
T  3825258 tctcgatatgatcattcatatcatgtcatgtcaaatttgtaatggctctccttaagtataaatatttatgaattttgataaggttttgcacctgcaccta 3825159  T
Q  101 ttaatggctaagtgggacaaagatatatatctgtgatttttgctacaaattta-------------ttactctaacaacttttcttaatacccgtgat-- 185  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||             |||||||||||| |||||||||||||||||||      
T  3825158 ttaatggctaagtgggacaaagatatatatccgtgatttttgctacaaatttaagccacaaatttattactctaacaatttttcttaatacccgtgatat 3825059  T
Q  186 ttttgtaaaatagtcttataaaaaatgatcggagggagtnnnnnnnnn-ggttatttttgttggtctgaaatctaaacaaatattgaatattcatatcgt 284  Q
    |||||||||||||||||||||||||||| ||||||||||          ||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  3825058 ttttgtaaaatagtcttataaaaaatga-cggagggagtaaaaaaaaaaggtcatttttgttggtctgaaatctaaacaaatattgaatattcatatcgt 3824960  T
Q  285 aaactacccttcaattaacgtaaaccatatttttcaatagggaaatgcttcttataacgaagcaaatccacccgaaggcatcacaattgtgttgttactg 384  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||      |    
T  3824959 aaactacccttcaattaacgtaaaccatatttttcaatagggaaatgcttcttataacgaagcaaatccacccgaaggcatcacaattgtgtt------g 3824866  T
Q  385 ttagttgtaattgcaaatttag 406  Q
    ||||||||||||||||||||||    
T  3824865 ttagttgtaattgcaaatttag 3824844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 5 - 85
Target Start/End: Complemental strand, 3838518 - 3838443
Alignment:
Q  5 tatatgatcattcatatcatgtcatgtcaaatttgtaatggctctccttaaatataaatatttatgaatttcgataaggtt 85  Q
    ||||||||||||||||||||     ||||||||||||||| |||| ||| | | ||||||||||||||||| |||||||||    
T  3838518 tatatgatcattcatatcat-----gtcaaatttgtaatgactcttctttagtgtaaatatttatgaattttgataaggtt 3838443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 145 - 188
Target Start/End: Complemental strand, 21813945 - 21813902
Alignment:
Q  145 acaaatttattactctaacaacttttcttaatacccgtgatttt 188  Q
    ||||||||||||||| |||||||||||||||||||||| |||||    
T  21813945 acaaatttattactccaacaacttttcttaatacccgtaatttt 21813902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 145 - 194
Target Start/End: Complemental strand, 30747673 - 30747624
Alignment:
Q  145 acaaatttattactctaacaacttttcttaatacccgtgatttttgtaaa 194  Q
    |||| |||||||||| |||||||||||||||||| | |||||||||||||    
T  30747673 acaactttattactccaacaacttttcttaatactcatgatttttgtaaa 30747624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 147 - 209
Target Start/End: Original strand, 16388647 - 16388709
Alignment:
Q  147 aaatttattactctaacaacttttcttaatacccgtgatttttgtaaaatagtcttataaaaa 209  Q
    ||||||||| ||| ||||||||||||||||||| || |||||||| ||||  ||| |||||||    
T  16388647 aaatttatttctccaacaacttttcttaatacctgtaatttttgttaaatgttctgataaaaa 16388709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 149 - 197
Target Start/End: Original strand, 17835225 - 17835273
Alignment:
Q  149 atttattactctaacaacttttcttaatacccgtgatttttgtaaaata 197  Q
    ||||||||||| |||||  ||| |||||||||||||||||||| |||||    
T  17835225 atttattactccaacaatattttttaatacccgtgatttttgtgaaata 17835273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 50; Significance: 2e-19; HSPs: 7)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 149 - 210
Target Start/End: Original strand, 44124103 - 44124164
Alignment:
Q  149 atttattactctaacaacttttcttaatacccgtgatttttgtaaaatagtcttataaaaaa 210  Q
    ||||||| ||| ||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  44124103 atttattgctccaacaacttttcttaatacctgtgatttttgtaaaatagtcttataaaaaa 44124164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 145 - 205
Target Start/End: Original strand, 44441192 - 44441251
Alignment:
Q  145 acaaatttattactctaacaacttttcttaatacccgtgatttttgtaaaatagtcttata 205  Q
    |||||||||| ||| |||||||||||| |||||||||||||||||||||| || |||||||    
T  44441192 acaaatttat-actttaacaacttttcataatacccgtgatttttgtaaagtattcttata 44441251  T

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Target: chr4; HSP #3
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 158 - 209
Target Start/End: Original strand, 26413890 - 26413941
Alignment:
Q  158 tctaacaacttttcttaatacccgtgatttttgtaaaatagtcttataaaaa 209  Q
    |||||||||||||||||| ||||||||| |||||||||| || |||||||||    
T  26413890 tctaacaacttttcttaaaacccgtgatatttgtaaaatggttttataaaaa 26413941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 145 - 193
Target Start/End: Original strand, 13502621 - 13502669
Alignment:
Q  145 acaaatttattactctaacaacttttcttaatacccgtgatttttgtaa 193  Q
    ||||||||||||||| |||||||||| |||||| |||| ||||||||||    
T  13502621 acaaatttattactcaaacaactttttttaatatccgtaatttttgtaa 13502669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 145 - 209
Target Start/End: Original strand, 34226555 - 34226619
Alignment:
Q  145 acaaatttattactctaacaacttttcttaatacccgtgatttttgtaaaatagtcttataaaaa 209  Q
    |||||||||||| ||| |||| |||| |||||||| ||| ||||||||||| | |||| ||||||    
T  34226555 acaaatttattattcttacaattttttttaatacctgtgttttttgtaaaacattcttgtaaaaa 34226619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 145 - 197
Target Start/End: Original strand, 37433787 - 37433839
Alignment:
Q  145 acaaatttattactctaacaacttttcttaatacccgtgatttttgtaaaata 197  Q
    ||||||||||||||  ||||| |||||||||||| | ||||||||| ||||||    
T  37433787 acaaatttattacttcaacaatttttcttaatactcatgatttttgaaaaata 37433839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 145 - 189
Target Start/End: Complemental strand, 52934432 - 52934388
Alignment:
Q  145 acaaatttattactctaacaacttttcttaatacccgtgattttt 189  Q
    ||||||||||||||| ||||| ||||||||||| ||||| |||||    
T  52934432 acaaatttattactccaacaaattttcttaataaccgtgtttttt 52934388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 49; Significance: 7e-19; HSPs: 4)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 145 - 209
Target Start/End: Original strand, 42314174 - 42314238
Alignment:
Q  145 acaaatttattactctaacaacttttcttaatacccgtgatttttgtaaaatagtcttataaaaa 209  Q
    ||||||||||||||| |||||||||||||||||| | |||||||||||||||| |||||||||||    
T  42314174 acaaatttattactccaacaacttttcttaatactcttgatttttgtaaaatactcttataaaaa 42314238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 145 - 210
Target Start/End: Original strand, 52259345 - 52259410
Alignment:
Q  145 acaaatttattactctaacaacttttcttaatacccgtgatttttgtaaaatagtcttataaaaaa 210  Q
    ||||||||||||||| |||||||||||||||||||| ||||||||||| | ||||| |||||||||    
T  52259345 acaaatttattactccaacaacttttcttaatacccatgatttttgtacagtagtcctataaaaaa 52259410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 145 - 208
Target Start/End: Complemental strand, 32899703 - 32899641
Alignment:
Q  145 acaaatttattactctaacaacttttcttaatacccgtgatttttgtaaaatagtcttataaaa 208  Q
    ||||||||||||||  |||||||||| ||||||  |||| ||||||||||||||||||||||||    
T  32899703 acaaatttattacttcaacaactttt-ttaatattcgtgttttttgtaaaatagtcttataaaa 32899641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 163 - 209
Target Start/End: Complemental strand, 29675608 - 29675562
Alignment:
Q  163 caacttttcttaatacccgtgatttttgtaaaatagtcttataaaaa 209  Q
    |||||||||||||||| ||||||||||||||| || |||||||||||    
T  29675608 caacttttcttaatactcgtgatttttgtaaagtaatcttataaaaa 29675562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 45; Significance: 2e-16; HSPs: 4)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 145 - 209
Target Start/End: Original strand, 13206837 - 13206901
Alignment:
Q  145 acaaatttattactctaacaacttttcttaatacccgtgatttttgtaaaatagtcttataaaaa 209  Q
    |||||||||||||||  ||||||||| ||||||| |||||||||| |||||||||||||||||||    
T  13206837 acaaatttattactcccacaactttttttaatactcgtgatttttataaaatagtcttataaaaa 13206901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 151 - 209
Target Start/End: Original strand, 45219633 - 45219691
Alignment:
Q  151 ttattactctaacaacttttcttaatacccgtgatttttgtaaaatagtcttataaaaa 209  Q
    ||||||||| ||||||||| |||||||||| ||||||||||||| || || ||||||||    
T  45219633 ttattactccaacaactttacttaatacccatgatttttgtaaactactcctataaaaa 45219691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 145 - 197
Target Start/End: Complemental strand, 9048162 - 9048110
Alignment:
Q  145 acaaatttattactctaacaacttttcttaatacccgtgatttttgtaaaata 197  Q
    ||||||||||||||| ||| ||||| ||||||||| |||||| ||||||||||    
T  9048162 acaaatttattactccaaccactttccttaatacctgtgattgttgtaaaata 9048110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 147 - 196
Target Start/End: Complemental strand, 30856092 - 30856043
Alignment:
Q  147 aaatttattactctaacaacttttcttaatacccgtgatttttgtaaaat 196  Q
    |||||||||| || ||||| | || |||||||||||||||||||||||||    
T  30856092 aaatttattattccaacaattctttttaatacccgtgatttttgtaaaat 30856043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 45; Significance: 2e-16; HSPs: 5)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 145 - 209
Target Start/End: Complemental strand, 328383 - 328319
Alignment:
Q  145 acaaatttattactctaacaacttttcttaatacccgtgatttttgtaaaatagtcttataaaaa 209  Q
    |||| |||||||||| |||||||||||||||||| | |||||||||||||||| |||||||||||    
T  328383 acaattttattactcaaacaacttttcttaatactcttgatttttgtaaaatactcttataaaaa 328319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 145 - 209
Target Start/End: Complemental strand, 26087092 - 26087028
Alignment:
Q  145 acaaatttattactctaacaacttttcttaatacccgtgatttttgtaaaatagtcttataaaaa 209  Q
    ||||||||||||||  ||||||||||||| |||| |||||||||||| | ||  |||||||||||    
T  26087092 acaaatttattacttcaacaacttttcttgatacacgtgatttttgttacatgttcttataaaaa 26087028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 163 - 208
Target Start/End: Complemental strand, 8740222 - 8740177
Alignment:
Q  163 caacttttcttaatacccgtgatttttgtaaaatagtcttataaaa 208  Q
    ||||||||||||||   |||||||||||||||||| ||||||||||    
T  8740222 caacttttcttaatgttcgtgatttttgtaaaataatcttataaaa 8740177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 145 - 194
Target Start/End: Complemental strand, 13684317 - 13684268
Alignment:
Q  145 acaaatttattactctaacaacttttcttaatacccgtgatttttgtaaa 194  Q
    ||||||||||||||| || || |||||||||||||||| |||||| ||||    
T  13684317 acaaatttattactccaataaattttcttaatacccgtaatttttataaa 13684268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 145 - 197
Target Start/End: Original strand, 13874064 - 13874116
Alignment:
Q  145 acaaatttattactctaacaacttttcttaatacccgtgatttttgtaaaata 197  Q
    |||||||||||| || |||||| ||| |||||| |||| ||||||||||||||    
T  13874064 acaaatttattaatccaacaacattttttaatatccgtaatttttgtaaaata 13874116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 8)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 145 - 205
Target Start/End: Original strand, 15013724 - 15013784
Alignment:
Q  145 acaaatttattactctaacaacttttcttaatacccgtgatttttgtaaaatagtcttata 205  Q
    ||||||||||| ||| |||||||||| ||||||||||||||||||||||| || |||||||    
T  15013724 acaaatttattgctccaacaactttttttaatacccgtgatttttgtaaattactcttata 15013784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 145 - 191
Target Start/End: Complemental strand, 15037256 - 15037210
Alignment:
Q  145 acaaatttattactctaacaacttttcttaatacccgtgatttttgt 191  Q
    ||||||||||||||| ||  |||||||||||||||||||||||||||    
T  15037256 acaaatttattactccaatgacttttcttaatacccgtgatttttgt 15037210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 145 - 187
Target Start/End: Complemental strand, 41162790 - 41162748
Alignment:
Q  145 acaaatttattactctaacaacttttcttaatacccgtgattt 187  Q
    |||||||||||| || |||||||||||||||||||||||||||    
T  41162790 acaaatttattagtccaacaacttttcttaatacccgtgattt 41162748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 147 - 191
Target Start/End: Complemental strand, 30588174 - 30588130
Alignment:
Q  147 aaatttattactctaacaacttttcttaatacccgtgatttttgt 191  Q
    ||||||||||||  ||||||||||||||||||| |||||||||||    
T  30588174 aaatttattacttcaacaacttttcttaataccagtgatttttgt 30588130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 145 - 179
Target Start/End: Complemental strand, 27247932 - 27247898
Alignment:
Q  145 acaaatttattactctaacaacttttcttaatacc 179  Q
    |||| ||||||||||||||||||||||||||||||    
T  27247932 acaactttattactctaacaacttttcttaatacc 27247898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 145 - 194
Target Start/End: Original strand, 22886699 - 22886748
Alignment:
Q  145 acaaatttattactctaacaacttttcttaatacccgtgatttttgtaaa 194  Q
    ||||||||||||||| ||  |||||| ||| |||||||||||||||||||    
T  22886699 acaaatttattactcgaaagactttttttagtacccgtgatttttgtaaa 22886748  T

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Target: chr7; HSP #7
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 145 - 194
Target Start/End: Original strand, 32097599 - 32097648
Alignment:
Q  145 acaaatttattactctaacaacttttcttaatacccgtgatttttgtaaa 194  Q
    ||||||||| |||| |||||| |||| ||||||| |||||||||||||||    
T  32097599 acaaatttaatactttaacaattttttttaatactcgtgatttttgtaaa 32097648  T

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Target: chr7; HSP #8
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 152 - 188
Target Start/End: Complemental strand, 9376762 - 9376726
Alignment:
Q  152 tattactctaacaacttttcttaatacccgtgatttt 188  Q
    |||||||| |||||||||||||||||||||| |||||    
T  9376762 tattactccaacaacttttcttaatacccgtaatttt 9376726  T

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Target: chr5 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 4)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 145 - 209
Target Start/End: Original strand, 11891987 - 11892051
Alignment:
Q  145 acaaatttattactctaacaacttttcttaatacccgtgatttttgtaaaatagtcttataaaaa 209  Q
    |||| |||||||||  |||||||||||||||||| ||||||||||||||| || |||||||||||    
T  11891987 acaattttattacttcaacaacttttcttaatactcgtgatttttgtaaactactcttataaaaa 11892051  T

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Target: chr5; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 145 - 189
Target Start/End: Original strand, 4524085 - 4524129
Alignment:
Q  145 acaaatttattactctaacaacttttcttaatacccgtgattttt 189  Q
    ||||||||||||||| ||||||||||||||||||||||| |||||    
T  4524085 acaaatttattactccaacaacttttcttaatacccgtgtttttt 4524129  T

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Target: chr5; HSP #3
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 145 - 190
Target Start/End: Complemental strand, 26188314 - 26188269
Alignment:
Q  145 acaaatttattactctaacaacttttcttaatacccgtgatttttg 190  Q
    |||||||||||| || ||||||||||| ||||||||||||||||||    
T  26188314 acaaatttattagtccaacaacttttcgtaatacccgtgatttttg 26188269  T

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Target: chr5; HSP #4
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 144 - 194
Target Start/End: Original strand, 32940248 - 32940298
Alignment:
Q  144 tacaaatttattactctaacaacttttcttaatacccgtgatttttgtaaa 194  Q
    ||||||||| || ||  |||||||||||||||||||||||| |||||||||    
T  32940248 tacaaatttcttgctacaacaacttttcttaatacccgtgaattttgtaaa 32940298  T

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Target: chr2 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 5)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 145 - 209
Target Start/End: Original strand, 18961472 - 18961536
Alignment:
Q  145 acaaatttattactctaacaacttttcttaatacccgtgatttttgtaaaatagtcttataaaaa 209  Q
    ||||||||||||||| |||||| ||||||||||||||||||| |||||| |  ||||||||||||    
T  18961472 acaaatttattactccaacaacatttcttaatacccgtgattgttgtaagacggtcttataaaaa 18961536  T

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Target: chr2; HSP #2
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 150 - 194
Target Start/End: Original strand, 6452109 - 6452153
Alignment:
Q  150 tttattactctaacaacttttcttaatacccgtgatttttgtaaa 194  Q
    |||||||||  ||||||||||||||||||| ||||||||||||||    
T  6452109 tttattacttcaacaacttttcttaatacctgtgatttttgtaaa 6452153  T

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Target: chr2; HSP #3
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 149 - 210
Target Start/End: Complemental strand, 7670322 - 7670261
Alignment:
Q  149 atttattactctaacaacttttcttaatacccgtgatttttgtaaaatagtcttataaaaaa 210  Q
    ||||||||||| ||| | |||||||||||  ||||||||||||||| || || |||||||||    
T  7670322 atttattactccaaccatttttcttaataatcgtgatttttgtaaattattcatataaaaaa 7670261  T

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Target: chr2; HSP #4
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 161 - 194
Target Start/End: Complemental strand, 35984891 - 35984858
Alignment:
Q  161 aacaacttttcttaatacccgtgatttttgtaaa 194  Q
    |||||||| |||||||||||||||||||||||||    
T  35984891 aacaacttatcttaatacccgtgatttttgtaaa 35984858  T

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Target: chr2; HSP #5
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 145 - 194
Target Start/End: Original strand, 36072448 - 36072497
Alignment:
Q  145 acaaatttattactctaacaacttttcttaatacccgtgatttttgtaaa 194  Q
    ||||||||||||||| ||||| |||| ||||||| ||| |||||||||||    
T  36072448 acaaatttattactccaacaattttttttaatactcgtaatttttgtaaa 36072497  T

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Target: scaffold0444 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0444
Description:

Target: scaffold0444; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 145 - 205
Target Start/End: Original strand, 6005 - 6064
Alignment:
Q  145 acaaatttattactctaacaacttttcttaatacccgtgatttttgtaaaatagtcttata 205  Q
    |||||||||| ||| |||||||||||| |||||||||||||||||||||| || |||||||    
T  6005 acaaatttat-actttaacaacttttcataatacccgtgatttttgtaaagtattcttata 6064  T

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Target: scaffold0039 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 145 - 209
Target Start/End: Original strand, 93516 - 93579
Alignment:
Q  145 acaaatttattactctaacaacttttcttaatacccgtgatttttgtaaaatagtcttataaaaa 209  Q
    |||| |||| ||||| |||||||||| ||||||||||||||||||||||| || || ||||||||    
T  93516 acaagtttaatactccaacaactttt-ttaatacccgtgatttttgtaaactactcatataaaaa 93579  T

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Target: scaffold0406 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0406
Description:

Target: scaffold0406; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 145 - 194
Target Start/End: Original strand, 8371 - 8420
Alignment:
Q  145 acaaatttattactctaacaacttttcttaatacccgtgatttttgtaaa 194  Q
    ||||||||||||||| || || |||| ||||||||||| |||||||||||    
T  8371 acaaatttattactcaaataaatttttttaatacccgtaatttttgtaaa 8420  T

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Target: scaffold0006 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 145 - 194
Target Start/End: Complemental strand, 109436 - 109387
Alignment:
Q  145 acaaatttattactctaacaacttttcttaatacccgtgatttttgtaaa 194  Q
    ||||||||||||||| || || ||||||||||| |||| |||||||||||    
T  109436 acaaatttattactccaataaattttcttaatatccgtaatttttgtaaa 109387  T

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Target: scaffold0285 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0285
Description:

Target: scaffold0285; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 145 - 209
Target Start/End: Original strand, 14029 - 14093
Alignment:
Q  145 acaaatttattactctaacaacttttcttaatacccgtgatttttgtaaaatagtcttataaaaa 209  Q
    ||||||||||||||  || || ||||||||| ||| ||| || |||||||||||||||| |||||    
T  14029 acaaatttattacttcaataatttttcttaaaacctgtgtttattgtaaaatagtcttacaaaaa 14093  T

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