View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF5905-Insertion-1 (Length: 928)

Name: NF5905-Insertion-1
Description: NF5905
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF5905-Insertion-1
NF5905-Insertion-1
[»] chr3 (36 HSPs)
chr3 (8-928)||(38393583-38394506)
chr3 (201-321)||(29135880-29136002)
chr3 (201-304)||(6462379-6462484)
chr3 (177-304)||(54261169-54261298)
chr3 (174-304)||(45877394-45877526)
chr3 (176-321)||(25294902-25295049)
chr3 (175-311)||(29127860-29127998)
chr3 (181-304)||(47219091-47219216)
chr3 (176-310)||(35315898-35316034)
chr3 (176-322)||(51060298-51060446)
chr3 (176-305)||(11687143-11687274)
chr3 (201-314)||(42412799-42412914)
chr3 (176-304)||(26207836-26207966)
chr3 (176-304)||(48341962-48342092)
chr3 (176-304)||(49198293-49198423)
chr3 (177-304)||(3755513-3755642)
chr3 (177-261)||(46529949-46530034)
chr3 (177-311)||(7650170-7650306)
chr3 (176-322)||(51682971-51683119)
chr3 (175-303)||(4638095-4638225)
chr3 (177-322)||(29762172-29762319)
chr3 (239-304)||(53649733-53649799)
chr3 (181-304)||(3136729-3136853)
chr3 (177-265)||(7613001-7613090)
chr3 (176-311)||(13893868-13894005)
chr3 (239-311)||(28572239-28572312)
chr3 (177-304)||(33251605-33251734)
chr3 (269-322)||(54237485-54237538)
chr3 (169-311)||(41630540-41630684)
chr3 (239-322)||(50405620-50405704)
chr3 (239-304)||(26043818-26043884)
chr3 (172-265)||(26590341-26590435)
chr3 (171-311)||(30767275-30767417)
chr3 (239-311)||(7328850-7328922)
chr3 (174-262)||(40944823-40944912)
chr3 (269-322)||(49021220-49021273)
[»] chr8 (18 HSPs)
chr8 (176-304)||(6100418-6100548)
chr8 (176-304)||(10927552-10927682)
chr8 (180-304)||(4479330-4479455)
chr8 (176-304)||(8141048-8141178)
chr8 (177-304)||(2467152-2467281)
chr8 (174-304)||(29933717-29933848)
chr8 (177-333)||(3418518-3418676)
chr8 (177-304)||(10535438-10535566)
chr8 (176-310)||(14666099-14666235)
chr8 (177-311)||(15884583-15884718)
chr8 (176-301)||(1013014-1013141)
chr8 (175-304)||(33935769-33935900)
chr8 (239-304)||(18374020-18374086)
chr8 (239-323)||(6042831-6042916)
chr8 (177-304)||(26570871-26571000)
chr8 (176-311)||(33401826-33401963)
chr8 (241-333)||(43032913-43033006)
chr8 (177-304)||(45521116-45521244)
[»] scaffold0170 (1 HSPs)
scaffold0170 (177-304)||(9791-9920)
[»] chr4 (32 HSPs)
chr4 (181-311)||(5472875-5473007)
chr4 (177-304)||(6779159-6779288)
chr4 (174-304)||(1446771-1446903)
chr4 (175-301)||(38075379-38075507)
chr4 (171-304)||(29895729-29895864)
chr4 (239-333)||(43468358-43468453)
chr4 (176-333)||(15829646-15829805)
chr4 (180-304)||(40780895-40781021)
chr4 (182-301)||(20421727-20421847)
chr4 (177-311)||(38165975-38166111)
chr4 (176-312)||(41339421-41339559)
chr4 (173-301)||(53599004-53599134)
chr4 (239-303)||(26237457-26237522)
chr4 (239-322)||(29588747-29588831)
chr4 (201-322)||(47078430-47078553)
chr4 (176-304)||(8888969-8889099)
chr4 (239-304)||(31588695-31588763)
chr4 (239-304)||(36145249-36145315)
chr4 (176-304)||(52950029-52950159)
chr4 (239-311)||(1940804-1940874)
chr4 (239-311)||(7246673-7246746)
chr4 (239-311)||(24166461-24166534)
chr4 (177-263)||(4736545-4736632)
chr4 (241-311)||(48317302-48317373)
chr4 (239-304)||(16450311-16450377)
chr4 (231-311)||(20532436-20532518)
chr4 (239-304)||(42722611-42722677)
chr4 (176-304)||(49260699-49260829)
chr4 (177-301)||(55920982-55921108)
chr4 (269-310)||(14077988-14078029)
chr4 (239-311)||(30317244-30317317)
chr4 (281-322)||(50485997-50486038)
[»] chr7 (23 HSPs)
chr7 (180-304)||(1797409-1797535)
chr7 (175-322)||(48804627-48804776)
chr7 (179-312)||(34659174-34659309)
chr7 (177-304)||(13095804-13095933)
chr7 (239-311)||(38578894-38578967)
chr7 (176-311)||(42210289-42210426)
chr7 (176-304)||(17748416-17748546)
chr7 (201-305)||(43862005-43862111)
chr7 (176-304)||(39420783-39420912)
chr7 (177-304)||(43346813-43346942)
chr7 (177-311)||(1605887-1606023)
chr7 (176-322)||(10047892-10048040)
chr7 (177-303)||(43925458-43925586)
chr7 (269-322)||(365180-365233)
chr7 (177-304)||(27028225-27028354)
chr7 (180-323)||(36619269-36619414)
chr7 (232-322)||(16802124-16802216)
chr7 (175-304)||(26423321-26423452)
chr7 (176-304)||(14650262-14650392)
chr7 (239-304)||(22973976-22974042)
chr7 (176-304)||(45960037-45960166)
chr7 (175-322)||(27875104-27875252)
chr7 (239-335)||(37514930-37515027)
[»] chr5 (26 HSPs)
chr5 (176-304)||(42086270-42086400)
chr5 (177-304)||(20525782-20525911)
chr5 (201-304)||(14588651-14588756)
chr5 (177-304)||(19572668-19572797)
chr5 (176-322)||(1538374-1538522)
chr5 (231-304)||(9805002-9805077)
chr5 (176-301)||(18136317-18136444)
chr5 (177-333)||(9812816-9812974)
chr5 (201-304)||(7308398-7308503)
chr5 (177-311)||(7866525-7866661)
chr5 (177-333)||(12704958-12705116)
chr5 (177-333)||(12766075-12766233)
chr5 (201-301)||(13664228-13664330)
chr5 (239-343)||(25417178-25417283)
chr5 (177-304)||(41163494-41163622)
chr5 (181-304)||(41800925-41801050)
chr5 (223-304)||(23383647-23383730)
chr5 (172-297)||(28857067-28857194)
chr5 (239-304)||(12081915-12081981)
chr5 (180-265)||(23247425-23247511)
chr5 (180-304)||(35813032-35813158)
chr5 (239-304)||(37263248-37263313)
chr5 (201-304)||(30995089-30995194)
chr5 (239-311)||(38369707-38369779)
chr5 (241-301)||(40117424-40117485)
chr5 (253-333)||(42861223-42861304)
[»] chr6 (16 HSPs)
chr6 (176-311)||(8932607-8932744)
chr6 (176-311)||(8944073-8944210)
chr6 (176-304)||(21898594-21898724)
chr6 (201-322)||(6606113-6606236)
chr6 (177-304)||(19089445-19089574)
chr6 (201-311)||(5253250-5253362)
chr6 (177-322)||(14107374-14107521)
chr6 (177-304)||(2271337-2271464)
chr6 (177-333)||(8611979-8612137)
chr6 (201-304)||(34954653-34954758)
chr6 (239-310)||(12635824-12635896)
chr6 (177-322)||(10311485-10311632)
chr6 (176-321)||(13468879-13469026)
chr6 (232-304)||(3601086-3601160)
chr6 (239-304)||(13036038-13036104)
chr6 (251-303)||(29444800-29444853)
[»] chr2 (34 HSPs)
chr2 (176-304)||(10046511-10046640)
chr2 (177-304)||(38962706-38962835)
chr2 (174-310)||(2550808-2550946)
chr2 (175-311)||(38005343-38005481)
chr2 (213-304)||(3848948-3849041)
chr2 (176-310)||(8410073-8410209)
chr2 (175-301)||(34356147-34356275)
chr2 (178-304)||(41187793-41187921)
chr2 (216-322)||(44139466-44139574)
chr2 (176-304)||(10026650-10026780)
chr2 (172-301)||(42770688-42770819)
chr2 (175-289)||(2149243-2149360)
chr2 (176-304)||(21180348-21180478)
chr2 (175-304)||(22593076-22593206)
chr2 (202-311)||(34722649-34722759)
chr2 (176-304)||(14853399-14853531)
chr2 (232-304)||(24179568-24179640)
chr2 (180-306)||(21286390-21286518)
chr2 (180-301)||(45263704-45263827)
chr2 (175-311)||(331442-331580)
chr2 (241-342)||(6358147-6358249)
chr2 (176-304)||(7747216-7747346)
chr2 (239-304)||(14169643-14169709)
chr2 (201-304)||(25540438-25540543)
chr2 (239-311)||(41031933-41032006)
chr2 (201-304)||(41220602-41220707)
chr2 (239-322)||(12455316-12455400)
chr2 (175-322)||(20612550-20612701)
chr2 (180-301)||(37560119-37560242)
chr2 (203-311)||(10823029-10823139)
chr2 (269-310)||(13026439-13026480)
chr2 (176-311)||(19976834-19976971)
chr2 (201-304)||(39201542-39201647)
chr2 (198-262)||(41187673-41187738)
[»] chr1 (34 HSPs)
chr1 (176-321)||(18915810-18915957)
chr1 (177-304)||(49078058-49078187)
chr1 (201-322)||(26325780-26325903)
chr1 (176-304)||(5855465-5855595)
chr1 (178-322)||(41663873-41664019)
chr1 (177-304)||(11397924-11398052)
chr1 (201-304)||(33498874-33498979)
chr1 (204-322)||(33004032-33004152)
chr1 (174-312)||(48798097-48798237)
chr1 (177-310)||(34697279-34697414)
chr1 (188-303)||(6563396-6563513)
chr1 (177-304)||(12744558-12744687)
chr1 (177-304)||(12755548-12755677)
chr1 (239-311)||(28324608-28324681)
chr1 (269-304)||(45726468-45726503)
chr1 (177-322)||(50503378-50503525)
chr1 (201-301)||(10336484-10336586)
chr1 (239-304)||(31576582-31576648)
chr1 (240-304)||(17092512-17092577)
chr1 (177-304)||(33418150-33418279)
chr1 (239-311)||(43959849-43959922)
chr1 (177-265)||(937561-937649)
chr1 (201-311)||(16956434-16956546)
chr1 (187-304)||(45361917-45362036)
chr1 (176-304)||(10422731-10422861)
chr1 (232-304)||(14254303-14254377)
chr1 (239-304)||(17642039-17642105)
chr1 (239-304)||(21849240-21849305)
chr1 (180-304)||(47312934-47313059)
chr1 (180-311)||(5063872-5064004)
chr1 (177-304)||(8763935-8764064)
chr1 (217-304)||(13265922-13266011)
chr1 (177-304)||(18708575-18708704)
chr1 (177-265)||(51437413-51437502)
[»] scaffold0223 (1 HSPs)
scaffold0223 (239-304)||(16888-16954)
[»] scaffold0005 (1 HSPs)
scaffold0005 (177-309)||(271103-271237)
[»] scaffold0341 (1 HSPs)
scaffold0341 (188-303)||(18589-18706)
[»] scaffold0010 (1 HSPs)
scaffold0010 (241-311)||(155738-155809)
[»] scaffold0291 (1 HSPs)
scaffold0291 (239-304)||(6864-6930)
[»] scaffold0009 (1 HSPs)
scaffold0009 (176-265)||(9381-9471)
[»] scaffold0006 (1 HSPs)
scaffold0006 (239-311)||(68526-68596)
[»] scaffold0016 (1 HSPs)
scaffold0016 (223-304)||(8735-8818)
[»] scaffold0002 (1 HSPs)
scaffold0002 (173-265)||(412100-412193)


Alignment Details
Target: chr3 (Bit Score: 816; Significance: 0; HSPs: 36)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 816; E-Value: 0
Query Start/End: Original strand, 8 - 928
Target Start/End: Complemental strand, 38394506 - 38393583
Alignment:
Q  8 actaaaggcgtaacatgccatttatataaaaacattcacaatatagagatcattttataagctaaaagcataacatattaacatgtcatttacattcaaa 107  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38394506 actaaaggcataacatgccatttatataaaaacattcacaatatagagatcattttataagctaaaagcataacatattaacatgtcatttacattcaaa 38394407  T
Q  108 atatcatccaaaatgtatatcattaacatccaaagcaggttacaactaaatcaaaacatgctctaaaataaccaagttgtttggacttcggtagcaagga 207  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  38394406 atatcatccaaaatgtatatcattaacatccaaagcaagttacaactaaatcaaaacatgctctaaaataactaagttgtttggacttcggtagcaagga 38394307  T
Q  208 gcttctttcaaggatgtatctgaagaataccggttcgattctcaggggaaacaacgctcggcagtgcgtatgtctctacgcatgagccggattagtcacc 307  Q
    ||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  38394306 gcttcttccaaggacgtatctgaagaataccggttcgattctcaggggaaacaacgctcggcagtgcgtatgtttctacgcatgagccggattagtcacc 38394207  T
Q  308 caccagtagtgggtcatagaccggtgtgcaagaaagtaaatgctctaaaataaaatcaaaacataataaaaactgcatttcgagtagctatcaaggctaa 407  Q
    ||||||| |||||||| ||||||||||| ||||||  ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  38394206 caccagtggtgggtcagagaccggtgtgaaagaaaaaaaatgctctaaaataaaatcaaaacataataaaaactgcatttggagtagctatcaaggctaa 38394107  T
Q  408 tttacagtcggacgatgcaaaccaggtgtttgcataaatttcatagtggtttatgccgcccataatgaagttctagtttgtggtgttagtggaagtggta 507  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||| |||||    
T  38394106 tttacagtcggacgatgcaaaccaggtgtttgcataaatttcatagtggtttatgccgcccataatgaagttctagtttgtggtggcagtggaaatggta 38394007  T
Q  508 cttcaaaatgcggggttgaccctctacaataatttacttttgcattttaacaaccactacgattttttaaattcacatttgatttaaatatgccctaatt 607  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  38394006 cttcaaaatgtggggttgaccctctacaataatttacttttgcattttaacaaccactacgattttttaaattcacatttgatttaaacatgccctaatt 38393907  T
Q  608 cattgaatagtacatagtacatcagcatacacttcaactaacaaagacaaagagagggaccaagacgactcatttgcaaaattagggtgttgaaagctcc 707  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||    
T  38393906 cattgaatagtacatagtacatcagcatacacttcaactaacaaagacaaggagagggaccaacacgactcatttgcaaaattagggtgttgaaagctcc 38393807  T
Q  708 cactttttcaattttaagagattaacaaatatatttaagtgtcaatttatctcatcattaattaaaccttaagagattaaaaaatatatttgtgtcaatt 807  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38393806 cactttttcaattttaagagattaaaaaatatatttaagtgtcaatttatctcatcattaattaaaccttaagagattaaaaaatatatttgtgtcaatt 38393707  T
Q  808 tgtcatcattaattaaacctacacattttctatttgagaggaactatc-agaatgatcc-aaaattaatgagtcagataaatatatag-ttttgatatat 904  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||| |||||||||||||||||||||||||||| |||||||||||    
T  38393706 tgtcatcattaattaaacctacacattttgtatttgagaggaactatcaagaatgatccaaaaattaatgagtcagataaatatatagtttttgatatat 38393607  T
Q  905 aacattatatatgatgtcatttta 928  Q
    ||||||||||||||||||||||||    
T  38393606 aacattatatatgatgtcatttta 38393583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 201 - 321
Target Start/End: Original strand, 29135880 - 29136002
Alignment:
Q  201 gcaaggagcttctttcaaggatgtatctgaagaataccgg-ttcgattctcaggggaaacaacgctcggc-agtgcgtatgtctctacgcatgagccgga 298  Q
    |||||||||||||| |||||| ||||| |  ||||||||| |||||||| |||||| |||||| || ||| |||||| ||| ||||||||||||||||||    
T  29135880 gcaaggagcttcttccaaggacgtatccggggaataccggattcgattcccagggggaacaacacttggccagtgcgcatgcctctacgcatgagccgga 29135979  T
Q  299 ttagtcacccaccagtagtgggt 321  Q
    ||||||  |||||| | ||||||    
T  29135980 ttagtcttccaccattggtgggt 29136002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 201 - 304
Target Start/End: Original strand, 6462379 - 6462484
Alignment:
Q  201 gcaaggagcttctttcaaggatgtatctgaagaataccgg-ttcgattctcaggggaaacaacgctcggc-agtgcgtatgtctctacgcatgagccgga 298  Q
    |||||||||| ||| |||||| |||||||  ||||||||| |||||||| |||||  ||||||||| ||| |||||| ||| ||||||||||||||||||    
T  6462379 gcaaggagctccttccaaggacgtatctggggaataccgggttcgattcacagggagaacaacgcttggccagtgcgcatgcctctacgcatgagccgga 6462478  T
Q  299 ttagtc 304  Q
    ||||||    
T  6462479 ttagtc 6462484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 177 - 304
Target Start/End: Original strand, 54261169 - 54261298
Alignment:
Q  177 aaccaagttgtttggacttcggtagcaaggagcttctttcaaggatgtatctgaagaataccgg-ttcgattctcaggggaaacaacgctcggc-agtgc 274  Q
    ||||||||||||||| || | || |||||||||| ||| |||||| ||| |||  ||||||||| ||||||||  ||| | ||||||||| ||| |||||    
T  54261169 aaccaagttgtttgggctccagtggcaaggagctccttccaaggacgtacctggggaataccgggttcgattcctaggaggaacaacgcttggccagtgc 54261268  T
Q  275 gtatgtctctacgcatgagccggattagtc 304  Q
    | ||| ||||||||||||||||||||||||    
T  54261269 gcatgcctctacgcatgagccggattagtc 54261298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 174 - 304
Target Start/End: Original strand, 45877394 - 45877526
Alignment:
Q  174 aataaccaagttgtttggacttcggtagcaaggagcttctttcaaggatgtatctgaagaataccgg-ttcgattctcaggggaaacaacgctcggc-ag 271  Q
    |||||||||||||||||| || | || |||||||||  ||| |||||| ||||| |  ||||||||| |||||||  ||||||||||||| || ||| ||    
T  45877394 aataaccaagttgtttgggctccagtggcaaggagccccttccaaggacgtatccggggaataccgggttcgatttccaggggaaacaacacttggccag 45877493  T
Q  272 tgcgtatgtctctacgcatgagccggattagtc 304  Q
    |||  ||| ||||||||||||||||||||||||    
T  45877494 tgcacatgcctctacgcatgagccggattagtc 45877526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 176 - 321
Target Start/End: Original strand, 25294902 - 25295049
Alignment:
Q  176 taaccaagttgtttggacttcggtagcaaggagcttctttcaaggatgtatctgaagaataccgg-ttcgattctcaggggaaacaacgctcggc-agtg 273  Q
    ||||||||||| |||| || | || |||||||||| ||| |||||| ||||| |  ||||||||| || ||||||| ||||||||||| || ||| ||||    
T  25294902 taaccaagttgcttgggctccagtggcaaggagctccttccaaggacgtatccggggaataccgggtttgattctctggggaaacaacacttggccagtg 25295001  T
Q  274 cgtatgtctctacgcatgagccggattagtcacccaccagtagtgggt 321  Q
    || ||| ||||| ||||||||||||||||||  |||||| | ||||||    
T  25295002 cgcatgcctctatgcatgagccggattagtcgtccaccattggtgggt 25295049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 175 - 311
Target Start/End: Original strand, 29127860 - 29127998
Alignment:
Q  175 ataaccaagttgtttggacttcggtagcaaggagcttctttcaaggatgtatctgaagaataccgg-ttcgattctcaggggaaacaacgctcgg-cagt 272  Q
    ||||||||||||||||| || | || |||||||| | ||| |||||| |||||||  ||||| ||| |||||||  |||||  |||||| || || ||||    
T  29127860 ataaccaagttgtttgggctccagtggcaaggagatccttccaaggacgtatctggggaatatcgggttcgatttccagggagaacaacacttggtcagt 29127959  T
Q  273 gcgtatgtctctacgcatgagccggattagtcacccacc 311  Q
    ||| ||| |||||||||||||||||||||||| ||||||    
T  29127960 gcgcatgcctctacgcatgagccggattagtcgcccacc 29127998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 181 - 304
Target Start/End: Original strand, 47219091 - 47219216
Alignment:
Q  181 aagttgtttggacttcggtagcaaggagcttctttcaaggatgtatctgaagaatacc-ggttcgattctcaggggaaacaacgctcggc-agtgcgtat 278  Q
    |||||||||||| ||| || | || |||||  || |||||| ||||| |  ||||||| |||||||||| || ||||||||||||| ||| |||||| ||    
T  47219091 aagttgtttggatttcagtggtaatgagctctttccaaggacgtatccggggaataccaggttcgattcccaagggaaacaacgcttggctagtgcgcat 47219190  T
Q  279 gtctctacgcatgagccggattagtc 304  Q
    | ||||||||||||||||||||||||    
T  47219191 gcctctacgcatgagccggattagtc 47219216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 176 - 310
Target Start/End: Original strand, 35315898 - 35316034
Alignment:
Q  176 taaccaagttgtttggacttcggtagcaaggagcttctttcaaggatgtatctgaagaataccgg-ttcgattctcaggggaaacaacgctcggc-agtg 273  Q
    |||||||||||||||| || | || |||| ||||| ||| |||||| ||| | | |||||| ||| |||||||| |||||| |||||| || ||| ||||    
T  35315898 taaccaagttgtttgggctccagtggcaaagagctccttccaaggacgtacccggagaatatcgggttcgattcccagggggaacaacacttggccagtg 35315997  T
Q  274 cgtatgtctctacgcatgagccggattagtcacccac 310  Q
    || ||| |||||||||||||| ||||||||| |||||    
T  35315998 cgcatgcctctacgcatgagctggattagtcgcccac 35316034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 176 - 322
Target Start/End: Complemental strand, 51060446 - 51060298
Alignment:
Q  176 taaccaagttgtttggacttcggtagcaaggagcttctttcaaggatgtatctgaagaataccgg-ttcgattctcaggggaaacaacgctcgg-cagtg 273  Q
    ||||||||||||||||||| | || ||||  |||| ||| ||||||| |||| |  ||||| ||| ||||||||||||||| |||||| || || |||||    
T  51060446 taaccaagttgtttggactccagtggcaaatagctccttccaaggatctatccggggaatatcgggttcgattctcagggggaacaacacttggtcagtg 51060347  T
Q  274 cgtatgtctctacgcatgagccggattagtcacccaccagtagtgggtc 322  Q
    || ||| |||||||||||| | |||||||||  |||||| | |||||||    
T  51060346 cgcatgcctctacgcatgaactggattagtcgtccaccattggtgggtc 51060298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 176 - 305
Target Start/End: Complemental strand, 11687274 - 11687143
Alignment:
Q  176 taaccaagttgtttggacttcggtagcaaggagcttctttcaaggatgtatctgaagaatacc-ggttcgattctcaggggaaacaacgctcgg-cagtg 273  Q
    |||||||||||||||| || | || ||||| |||| ||| |||||| ||| ||| |||||||| |||| |||||||||||| ||||| ||| || |||||    
T  11687274 taaccaagttgtttgggctccagtggcaagaagctccttccaaggacgtacctggagaataccgggtttgattctcagggggaacaatgcttggccagtg 11687175  T
Q  274 cgtatgtctctacgcatgagccggattagtca 305  Q
    || ||| ||||||| ||||| | |||||||||    
T  11687174 cgcatgcctctacgtatgagtcagattagtca 11687143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 201 - 314
Target Start/End: Complemental strand, 42412914 - 42412799
Alignment:
Q  201 gcaaggagcttctttcaaggatgtatctgaagaataccgg-ttcgattctcaggggaaacaacgctcggca-gtgcgtatgtctctacgcatgagccgga 298  Q
    |||||||||| ||| |||||| ||||| |  ||||||||| |||||||| | |||| ||||||||| |||| ||||  ||| ||||||||||||||||||    
T  42412914 gcaaggagctccttccaaggacgtatccggggaataccgggttcgattcccggggggaacaacgcttggcaagtgcccatgcctctacgcatgagccgga 42412815  T
Q  299 ttagtcacccaccagt 314  Q
    |||||| | |||||||    
T  42412814 ttagtcgctcaccagt 42412799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 176 - 304
Target Start/End: Complemental strand, 26207966 - 26207836
Alignment:
Q  176 taaccaagttgtttggacttcggtagcaaggagcttctttcaaggatgtatctgaagaataccgg-ttcgattctcaggggaaacaacgctcggc-agtg 273  Q
    ||||||||||| |||| || | || |||||||||| ||| |||||||||| | |  ||||||||| |||||||| || ||| ||||||||| | | ||||    
T  26207966 taaccaagttgcttgggctccagtggcaaggagctccttccaaggatgtacccggggaataccgggttcgattcccacggggaacaacgcttgtccagtg 26207867  T
Q  274 cgtatgtctctacgcatgagccggattagtc 304  Q
     | ||| ||||||||||||||||||||||||    
T  26207866 tgcatgcctctacgcatgagccggattagtc 26207836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 176 - 304
Target Start/End: Original strand, 48341962 - 48342092
Alignment:
Q  176 taaccaagttgtttggacttcggtagcaaggagcttctttcaaggatgtatctgaagaatacc-ggttcgattctcaggggaaacaacgctcggc-agtg 273  Q
    |||||||||||||||| || | || |||||||||| ||| |||||| ||| |||  ||||||| ||||| ||||  ||||| ||||||||| ||| ||||    
T  48341962 taaccaagttgtttgggctccagtggcaaggagctccttccaaggacgtacctggggaataccgggttctattcctagggggaacaacgcttggctagtg 48342061  T
Q  274 cgtatgtctctacgcatgagccggattagtc 304  Q
    || ||| |||||||||||| || ||||||||    
T  48342062 cgcatgcctctacgcatgaaccagattagtc 48342092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 176 - 304
Target Start/End: Original strand, 49198293 - 49198423
Alignment:
Q  176 taaccaagttgtttggacttcggtagcaaggagcttctttcaaggatgtatctgaagaataccgg-ttcgattctcaggggaaacaacgctcggc-agtg 273  Q
    |||||||||||||||| || | ||  ||||||| ||||| ||||||  |||| |  ||||||||| ||||||||  ||||| |||||| || ||| ||||    
T  49198293 taaccaagttgtttgggctccagtgacaaggagtttcttccaaggacatatccggggaataccgggttcgattcctagggggaacaacacttggccagtg 49198392  T
Q  274 cgtatgtctctacgcatgagccggattagtc 304  Q
    || ||| ||||||||||||||||||||||||    
T  49198393 cgcatgcctctacgcatgagccggattagtc 49198423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 177 - 304
Target Start/End: Original strand, 3755513 - 3755642
Alignment:
Q  177 aaccaagttgtttggacttcggtagcaaggagcttctttcaaggatgtatctgaagaataccgg-ttcgattctcaggggaaacaacgctcggc-agtgc 274  Q
    |||||||||| ||||||| | || |||| |||||  ||||||||| ||||| |  ||||||||  |||||||| |||| | ||||||| | | | |||||    
T  3755513 aaccaagttgcttggactccagtggcaaagagctcttttcaaggacgtatccggggaataccgacttcgattcccaggaggaacaacgtttgaccagtgc 3755612  T
Q  275 gtatgtctctacgcatgagccggattagtc 304  Q
    | ||||||||||||||||||||||||||||    
T  3755613 gcatgtctctacgcatgagccggattagtc 3755642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 177 - 261
Target Start/End: Complemental strand, 46530034 - 46529949
Alignment:
Q  177 aaccaagttgtttggacttcggtagcaaggagcttctttcaaggatgtatctgaagaatacc-ggttcgattctcaggggaaacaa 261  Q
    ||||||||||||||| || | || |||||||||| |||||||||| ||| |||  ||||||| |||||||||||||| ||||||||    
T  46530034 aaccaagttgtttgggctccagtggcaaggagctcctttcaaggacgtacctggggaataccgggttcgattctcagaggaaacaa 46529949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 177 - 311
Target Start/End: Original strand, 7650170 - 7650306
Alignment:
Q  177 aaccaagttgtttggacttcggtagcaaggagcttctttcaaggatgtatctgaagaataccgg-ttcgattctcaggggaaacaacgctcggc-agtgc 274  Q
    |||||||||||||||  | | || |||||||| | ||||||||||||||  |   ||||||||| |||||||  |||||| |||||| || ||| ||| |    
T  7650170 aaccaagttgtttgggttccagtggcaaggagttcctttcaaggatgtacttagggaataccgggttcgatttccagggggaacaacacttggccagtac 7650269  T
Q  275 gtatgtctctacgcatgagccggattagtcacccacc 311  Q
    | ||||||||||||| |||||||||||||| ||||||    
T  7650270 gaatgtctctacgcacgagccggattagtcgcccacc 7650306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 176 - 322
Target Start/End: Complemental strand, 51683119 - 51682971
Alignment:
Q  176 taaccaagttgtttggacttcggtagcaaggagcttctttcaaggatgtatctgaagaatacc-ggttcgattctcaggggaaacaacgctcggc-agtg 273  Q
    |||||||||||||||| || | || || ||||||| ||| ||| || ||||| |  ||||||| |||||||||| |||||| ||||||||| | | ||||    
T  51683119 taaccaagttgtttgggctccagtggcgaggagctccttccaaagacgtatccggggaataccaggttcgattcccagggggaacaacgcttgaccagtg 51683020  T
Q  274 cgtatgtctctacgcatgagccggattagtcacccaccagtagtgggtc 322  Q
    || ||| |||| | || |||||||||||||| ||||||| | |||||||    
T  51683019 cgcatgcctctccacacgagccggattagtcgcccaccaatggtgggtc 51682971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 175 - 303
Target Start/End: Original strand, 4638095 - 4638225
Alignment:
Q  175 ataaccaagttgtttggacttcggtagcaaggagcttctttcaaggatgtatct---gaagaataccggttcgattctcaggggaaacaacgctcg-gca 270  Q
    |||||||||||||||||||||| || |||||||| | |||| ||||| ||||||    || ||||  |||||||||| |||| ||||||||||| |  ||    
T  4638095 ataaccaagttgtttggacttcagtggcaaggagttccttttaaggacgtatcttggaaataata--ggttcgattcccaggagaaacaacgcttgacca 4638192  T
Q  271 gtgcgtatgtctctacgcatgagccggattagt 303  Q
    ||||| ||  ||||||||| |||||||||||||    
T  4638193 gtgcgcatacctctacgcacgagccggattagt 4638225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 177 - 322
Target Start/End: Complemental strand, 29762319 - 29762172
Alignment:
Q  177 aaccaagttgtttggacttcggtagcaaggagcttctttcaaggatgtatctgaagaata-ccggttcgattctcaggggaaacaacgctcgg-cagtgc 274  Q
    |||||||||| |||| || | || |||||||||| ||| |||||||||||  |  ||||| | ||| ||||||||||||| |||||| || || ||||||    
T  29762319 aaccaagttgcttgggctccagtggcaaggagctccttccaaggatgtattcggggaatatcgggtccgattctcaggggcaacaacacttggccagtgc 29762220  T
Q  275 gtatgtctctacgcatgagccggattagtcacccaccagtagtgggtc 322  Q
    | ||| ||||| |||||||| |||||||||  |||||| | |||||||    
T  29762219 gcatgcctctatgcatgagctggattagtcgtccaccattggtgggtc 29762172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 239 - 304
Target Start/End: Original strand, 53649733 - 53649799
Alignment:
Q  239 ggttcgattctcaggggaaacaacgctcggc-agtgcgtatgtctctacgcatgagccggattagtc 304  Q
    ||||||||||||||||  |||||| || ||| ||||||  |||||||||||||||||||||||||||    
T  53649733 ggttcgattctcagggtgaacaacacttggccagtgcgcctgtctctacgcatgagccggattagtc 53649799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 181 - 304
Target Start/End: Complemental strand, 3136853 - 3136729
Alignment:
Q  181 aagttgtttggacttcggtagcaaggagcttctttcaaggatgtatctgaagaataccgg-ttcgattctcaggggaaacaacgctcgg-cagtgcgtat 278  Q
    ||||||||||| || | || ||||| |||| |||||||||| ||| | |  ||||||||| ||||||| ||||||||| |||| || || ||||||| ||    
T  3136853 aagttgtttgggctcccgtggcaagaagctcctttcaaggacgtacccggggaataccggattcgattttcaggggaa-caacacttgggcagtgcgcat 3136755  T
Q  279 gtctctacgcatgagccggattagtc 304  Q
    | ||||||||||||| ||||||||||    
T  3136754 gcctctacgcatgagtcggattagtc 3136729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 177 - 265
Target Start/End: Complemental strand, 7613090 - 7613001
Alignment:
Q  177 aaccaagttgtttggacttcggtagcaaggagcttctttcaaggatgtatctgaagaatacc-ggttcgattctcaggggaaacaacgct 265  Q
    ||||||| |||||||||||| || |||||||||| ||| |||||| |||  ||  ||||||| |||||||||| |||||| |||||||||    
T  7613090 aaccaagctgtttggacttcagtggcaaggagctccttccaaggacgtacttggggaataccgggttcgattcccagggggaacaacgct 7613001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 176 - 311
Target Start/End: Original strand, 13893868 - 13894005
Alignment:
Q  176 taaccaagttgtttggacttcggtagcaaggagcttctttcaaggatgtatctgaagaatacc-ggttcgattctcaggggaaacaacgctcgg-cagtg 273  Q
    |||||||||||||||| || | || |||||||||| ||| |||||| || || |  ||||||| |||| ||||  |||||| ||||||||| || || ||    
T  13893868 taaccaagttgtttgggctccagtggcaaggagctccttccaaggacgtgtccggggaataccgggttggatttccagggggaacaacgcttggtcaatg 13893967  T
Q  274 cgtatgtctctacgcatgagccggattagtcacccacc 311  Q
    || ||| |||||| || |||||||||||||| ||||||    
T  13893968 cgcatgcctctacacacgagccggattagtcgcccacc 13894005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 239 - 311
Target Start/End: Complemental strand, 28572312 - 28572239
Alignment:
Q  239 ggttcgattctcaggggaaacaacgctcggc-agtgcgtatgtctctacgcatgagccggattagtcacccacc 311  Q
    |||||||||| |||||||||||||||| ||| |||  | ||| ||||||||| |||||||||||||| ||||||    
T  28572312 ggttcgattcccaggggaaacaacgcttggccagtatgcatgcctctacgcacgagccggattagtcgcccacc 28572239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 177 - 304
Target Start/End: Original strand, 33251605 - 33251734
Alignment:
Q  177 aaccaagttgtttggacttcggtagcaaggagcttctttcaaggatgtatctgaagaataccgg-ttcgattctcaggggaaacaacgctcggc-agtgc 274  Q
    ||||||||||||||| || |||| |||| ||||| ||| |||||| ||||  |  ||||||||| |||||||| | | || ||||||| | ||| ||||     
T  33251605 aaccaagttgtttgggctccggtggcaatgagctccttccaaggacgtattaggggaataccgggttcgattcccggtgggaacaacgtttggccagtgt 33251704  T
Q  275 gtatgtctctacgcatgagccggattagtc 304  Q
    | ||| ||||||||||||||||||||||||    
T  33251705 gcatgcctctacgcatgagccggattagtc 33251734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 269 - 322
Target Start/End: Original strand, 54237485 - 54237538
Alignment:
Q  269 cagtgcgtatgtctctacgcatgagccggattagtcacccaccagtagtgggtc 322  Q
    ||||||| ||||||||||||||||||||||| ||||  |||||| |||||||||    
T  54237485 cagtgcgcatgtctctacgcatgagccggataagtcgtccaccattagtgggtc 54237538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 169 - 311
Target Start/End: Complemental strand, 41630684 - 41630540
Alignment:
Q  169 tctaaaataaccaagttgtttggacttcggtagcaaggagcttctttcaaggatgtatctgaagaataccgg-ttcgattctcaggggaaacaacgctcg 267  Q
    |||| |||||||||||||||||| || | ||  ||||||||| ||| || ||| ||| | | | |||||||| ||| |||| || ||| ||||||||| |    
T  41630684 tctacaataaccaagttgtttgggctccagtgacaaggagctccttccatggacgtaaccggaaaataccgggttcaattcccaaggggaacaacgcttg 41630585  T
Q  268 gc-agtgcgtatgtctctacgcatgagccggattagtcacccacc 311  Q
     | |||||| ||| |||||| ||||||||||||||||| ||||||    
T  41630584 cccagtgcgcatgcctctacacatgagccggattagtcgcccacc 41630540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 239 - 322
Target Start/End: Complemental strand, 50405704 - 50405620
Alignment:
Q  239 ggttcgattctcaggggaaacaacgctcg-gcagtgcgtatgtctctacgcatgagccggattagtcacccaccagtagtgggtc 322  Q
    ||||||||||  ||||||||||||||| |  ||||||| ||| ||||||||| ||| |||||||||| ||||||| | |||||||    
T  50405704 ggttcgattccgaggggaaacaacgcttgaccagtgcgcatgcctctacgcacgagtcggattagtcgcccaccattggtgggtc 50405620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 239 - 304
Target Start/End: Original strand, 26043818 - 26043884
Alignment:
Q  239 ggttcgattctcaggggaaacaacgctcggc-agtgcgtatgtctctacgcatgagccggattagtc 304  Q
    |||||||||| |||||  |||||| || ||| |||||| ||| ||||||||||||||||||||||||    
T  26043818 ggttcgattcccagggagaacaacacttggccagtgcgcatgcctctacgcatgagccggattagtc 26043884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 172 - 265
Target Start/End: Complemental strand, 26590435 - 26590341
Alignment:
Q  172 aaaataaccaagttgtttggacttcggtagcaaggagcttctttcaaggatgtatctgaagaataccgg-ttcgattctcaggggaaacaacgct 265  Q
    |||||||| ||||| |||||||| | ||  |||| || |||||||||||| ||| | ||||||||  || ||||||||||||||| |||||||||    
T  26590435 aaaataacaaagttttttggactccagtgacaagaagtttctttcaaggacgtacccgaagaatattgggttcgattctcagggggaacaacgct 26590341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 171 - 311
Target Start/End: Complemental strand, 30767417 - 30767275
Alignment:
Q  171 taaaataaccaagttgtttggacttcggtagcaaggagcttctttcaaggatgtatctgaagaataccgg-ttcgattctcaggggaaacaacgctcggc 269  Q
    |||| |||| |||||| |||| || | || |||||||| | ||| |||||||||| |||  ||||| ||| |||||||  |||||| |||||| || |||    
T  30767417 taaattaactaagttgcttgggctccagtggcaaggagttccttccaaggatgtacctggggaatatcgggttcgatttccagggggaacaacacttggc 30767318  T
Q  270 -agtgcgtatgtctctacgcatgagccggattagtcacccacc 311  Q
     |||| | ||| ||||||||| |||||||||||||| ||||||    
T  30767317 cagtgtgcatgcctctacgcacgagccggattagtcgcccacc 30767275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 239 - 311
Target Start/End: Original strand, 7328850 - 7328922
Alignment:
Q  239 ggttcgattctcaggggaaacaacgctcggc-agtgcgtatgtctctacgcatgagccggattagtcacccacc 311  Q
    |||||||||| |||||| |||||| || ||| |||||| ||| || ||||||||||||||||||||| ||||||    
T  7328850 ggttcgattcccagggggaacaacacttggccagtgcgcatgcct-tacgcatgagccggattagtcgcccacc 7328922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 174 - 262
Target Start/End: Original strand, 40944823 - 40944912
Alignment:
Q  174 aataaccaagttgtttggacttcggtagcaaggagcttctttcaaggatgtatctgaagaataccg-gttcgattctcaggggaaacaac 262  Q
    ||||||||||||| |||| || |||| ||||| |||| ||| |||||| |||||   ||||||||| ||||||||| |||||| ||||||    
T  40944823 aataaccaagttgcttgggctccggtggcaagaagctccttccaaggacgtatccagagaataccgagttcgattcccagggggaacaac 40944912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 269 - 322
Target Start/End: Complemental strand, 49021273 - 49021220
Alignment:
Q  269 cagtgcgtatgtctctacgcatgagccggattagtcacccaccagtagtgggtc 322  Q
    ||||||| ||| ||||||||||||||||||||||||  |||||| | |||||||    
T  49021273 cagtgcgcatgcctctacgcatgagccggattagtcgtccaccattggtgggtc 49021220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 55; Significance: 4e-22; HSPs: 18)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 176 - 304
Target Start/End: Original strand, 6100418 - 6100548
Alignment:
Q  176 taaccaagttgtttggacttcggtagcaaggagcttctttcaaggatgtatctgaagaatacc-ggttcgattctcaggggaaacaacgctcgg-cagtg 273  Q
    |||||||||||||||| |||| || |||||||||| |||||||||| ||||| |  ||||||| |||||||||| |||| | ||||||||| || |||||    
T  6100418 taaccaagttgtttgggcttcagtggcaaggagctcctttcaaggacgtatccggggaataccgggttcgattcccaggaggaacaacgcttggccagtg 6100517  T
Q  274 cgtatgtctctacgcatgagccggattagtc 304  Q
    || ||| | ||||||||||||||||||||||    
T  6100518 cgcatgccactacgcatgagccggattagtc 6100548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 176 - 304
Target Start/End: Original strand, 10927552 - 10927682
Alignment:
Q  176 taaccaagttgtttggacttcggtagcaaggagcttctttcaaggatgtatctgaagaatacc-ggttcgattctcaggggaaacaacgctcgg-cagtg 273  Q
    ||||||||||| |||| |||| || ||||||||||||||||||||| ||| | |  ||||||| ||||||||||  ||| | ||||||||| || |||||    
T  10927552 taaccaagttgcttgggcttcagtggcaaggagcttctttcaaggacgtacccggggaataccgggttcgattcctaggaggaacaacgcttggccagtg 10927651  T
Q  274 cgtatgtctctacgcatgagccggattagtc 304  Q
    || ||| ||||||||||||||||||||||||    
T  10927652 cgcatgcctctacgcatgagccggattagtc 10927682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 180 - 304
Target Start/End: Complemental strand, 4479455 - 4479330
Alignment:
Q  180 caagttgtttggacttcggtagcaaggagcttctttcaaggatgtatctgaagaataccgg-ttcgattctcaggggaaacaacgctcggc-agtgcgta 277  Q
    ||||||||||||  ||| || ||||| || | |||||||||| ||| ||| |||||||||| |||||||| |||||||| ||||||| ||| |||||| |    
T  4479455 caagttgtttgggtttcagtggcaagaagttcctttcaaggacgtacctgtagaataccggattcgattcccaggggaa-caacgcttggccagtgcgca 4479357  T
Q  278 tgtctctacgcatgagccggattagtc 304  Q
    || |||||||||||||| |||||||||    
T  4479356 tgcctctacgcatgagctggattagtc 4479330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 176 - 304
Target Start/End: Original strand, 8141048 - 8141178
Alignment:
Q  176 taaccaagttgtttggacttcggtagcaaggagcttctttcaaggatgtatctgaagaatacc-ggttcgattctcaggggaaacaacgctcgg-cagtg 273  Q
    |||||||||||||||| || | || |||||||||| ||| |||||| ||||  |  ||||||| |||||||||  |||||||||||||||| || |||||    
T  8141048 taaccaagttgtttgggctccagtggcaaggagctgcttccaaggacgtattcggggaataccgggttcgatttccaggggaaacaacgcttggccagtg 8141147  T
Q  274 cgtatgtctctacgcatgagccggattagtc 304  Q
    || ||| |||||||||||||| | |||||||    
T  8141148 cgcatgcctctacgcatgagctgaattagtc 8141178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 177 - 304
Target Start/End: Complemental strand, 2467281 - 2467152
Alignment:
Q  177 aaccaagttgtttggacttcggtagcaaggagcttctttcaaggatgtatctgaagaataccgg-ttcgattctcaggggaaacaacgctcggc-agtgc 274  Q
    |||||||||| |||| || | || |||||||||| ||| |||||| ||||| |  ||||||||| |||||||  |||||| |||||| || ||| |||||    
T  2467281 aaccaagttgcttgggctccagtggcaaggagctccttccaaggacgtatccggggaataccgggttcgatttccagggggaacaactcttggccagtgc 2467182  T
Q  275 gtatgtctctacgcatgagccggattagtc 304  Q
    | ||||||||| ||||||||||||||||||    
T  2467181 gcatgtctctatgcatgagccggattagtc 2467152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 174 - 304
Target Start/End: Original strand, 29933717 - 29933848
Alignment:
Q  174 aataaccaagttgtttggacttcggtagcaaggagcttctttcaaggatgtatctgaagaataccggttcgattctcaggggaaacaacgctcg-gcagt 272  Q
    ||||||||||||||||||||| | || |||||||||| |||  ||| ||||||| | ||||||| |||||||||| |||||  |||||| || |  ||||    
T  29933717 aataaccaagttgtttggactccagtggcaaggagctccttctaagaatgtatccggagaatacgggttcgattcccagggagaacaacacttgaccagt 29933816  T
Q  273 gcgtatgtctctacgcatgagccggattagtc 304  Q
    |   ||| ||||||| ||||||||||||||||    
T  29933817 gtacatgcctctacgtatgagccggattagtc 29933848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 177 - 333
Target Start/End: Complemental strand, 3418676 - 3418518
Alignment:
Q  177 aaccaagttgtttggacttcggtagcaaggagcttctttcaaggatgtatctgaagaata-ccggttcgattctcaggggaaacaacgctcgg-cagtgc 274  Q
    |||||||||||||||||| | || |||||||||| ||| |||||| |||||||  ||||| | ||||||||| | ||| | |||||| || || ||||||    
T  3418676 aaccaagttgtttggactcccgtggcaaggagctccttccaaggacgtatctggggaatatcgggttcgatttttaggaggaacaacacttggccagtgc 3418577  T
Q  275 gtatgtctctacgcatgagccggattagtcacccaccagtagtgggtcatagaccggtg 333  Q
    | |||  |||||||||||| | ||||||||  |||||  |||||||||| | |||||||    
T  3418576 gcatgcgtctacgcatgagtcagattagtcgtccacctttagtgggtcagaaaccggtg 3418518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 177 - 304
Target Start/End: Complemental strand, 10535566 - 10535438
Alignment:
Q  177 aaccaagttgtttggacttcggtagcaaggagcttctttcaaggatgtatctgaagaatac-cggttcgattctcaggggaaacaacgctcg-gcagtgc 274  Q
    |||||||||||||||||| | || |||||||||| ||| |||||| ||||| || ||||||  ||||| ||| ||||||| |||| |||| |  ||||||    
T  10535566 aaccaagttgtttggactccagtggcaaggagctccttccaaggacgtatccgaggaatacatggttcaattttcagggg-aacaccgcttgaccagtgc 10535468  T
Q  275 gtatgtctctacgcatgagccggattagtc 304  Q
    | ||||||| |||||||||||| |||||||    
T  10535467 gcatgtctccacgcatgagccgaattagtc 10535438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 176 - 310
Target Start/End: Complemental strand, 14666235 - 14666099
Alignment:
Q  176 taaccaagttgtttggacttcggtagcaaggagcttctttcaaggatgtatctgaagaataccgg-ttcgattctcaggggaaacaacgctcgg-cagtg 273  Q
    ||||||||||| |||| || | || ||||||||||  || |||||| ||||| |  ||||||||| |||||||| ||||||||||||| || || |||||    
T  14666235 taaccaagttgcttgggctccagtggcaaggagctcattccaaggacgtatccggggaataccgggttcgattcccaggggaaacaacacttggccagtg 14666136  T
Q  274 cgtatgtctctacgcatgagccggattagtcacccac 310  Q
    || ||| |||||||||  |||| |||||||| |||||    
T  14666135 cgcatgcctctacgcacaagccagattagtcgcccac 14666099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 177 - 311
Target Start/End: Complemental strand, 15884718 - 15884583
Alignment:
Q  177 aaccaagttgtttggacttcggtagcaaggagcttctttcaaggatgtatctgaagaataccgg-ttcgattctcaggggaaacaacgctcggca-gtgc 274  Q
    |||||||||| |||| || | || | |||||||| ||| |||||| ||| |||  ||||||||| |||||||| |||||||| |||| || |||| ||||    
T  15884718 aaccaagttgattgggctccagtggtaaggagctccttccaaggacgtacctggggaataccgggttcgattcccaggggaa-caacacttggcaagtgc 15884620  T
Q  275 gtatgtctctacgcatgagccggattagtcacccacc 311  Q
    | ||| ||||||||| |||||||||||||| ||||||    
T  15884619 gcatgcctctacgcacgagccggattagtcgcccacc 15884583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 176 - 301
Target Start/End: Complemental strand, 1013141 - 1013014
Alignment:
Q  176 taaccaagttgtttggacttcggtagcaaggagcttctttcaaggatgtatctgaagaatacc-ggttcgattctcaggggaaacaacgctcgg-cagtg 273  Q
    ||||||||||| |||| || | || ||||||||||| || |||||| ||||| |  ||||||| |||||||||| |||||| ||||||||| || ||||     
T  1013141 taaccaagttgcttgggctccagtggcaaggagctttttccaaggacgtatccggggaataccgggttcgattcccagggggaacaacgcttggccagta 1013042  T
Q  274 cgtatgtctctacgcatgagccggatta 301  Q
    |  ||| |||||||||||||||| ||||    
T  1013041 cacatgcctctacgcatgagccgaatta 1013014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 175 - 304
Target Start/End: Complemental strand, 33935900 - 33935769
Alignment:
Q  175 ataaccaagttgtttggacttcggtagcaaggagcttctttcaaggatgtatctgaagaataccgg-ttcgattctcaggggaaacaacgctcgg-cagt 272  Q
    ||||||||||||||||| || | || |||||||||| |||| ||||||||| |  | ||||||||| ||||||||  ||||  |||||| || || ||||    
T  33935900 ataaccaagttgtttgggctccagttgcaaggagctccttttaaggatgtacccaaggaataccggattcgattcctagggagaacaacacttggccagt 33935801  T
Q  273 gcgtatgtctctacgcatgagccggattagtc 304  Q
    ||| ||| || |||||||||| ||||||||||    
T  33935800 gcgcatgcctatacgcatgagtcggattagtc 33935769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 239 - 304
Target Start/End: Original strand, 18374020 - 18374086
Alignment:
Q  239 ggttcgattctcaggggaaacaacgctcggc-agtgcgtatgtctctacgcatgagccggattagtc 304  Q
    ||||||||||||||||  ||||||||| | | |||||| ||| ||||||||||||||||||||||||    
T  18374020 ggttcgattctcagggagaacaacgcttgaccagtgcgcatgcctctacgcatgagccggattagtc 18374086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 239 - 323
Target Start/End: Original strand, 6042831 - 6042916
Alignment:
Q  239 ggttcgattctcaggggaaacaacgctcggc-agtgcgtatgtctctacgcatgagccggattagtcacccaccagtagtgggtca 323  Q
    |||||||||| || ||| ||||||||| ||| |||||| ||| ||  |||||||||||||||||||| ||||||| | ||||||||    
T  6042831 ggttcgattcccaaggggaacaacgcttggccagtgcgcatgcctaaacgcatgagccggattagtcgcccaccactggtgggtca 6042916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 177 - 304
Target Start/End: Original strand, 26570871 - 26571000
Alignment:
Q  177 aaccaagttgtttggacttcggtagcaaggagcttctttcaaggatgtatctgaagaataccgg-ttcgattctcaggggaaacaacgctcggc-agtgc 274  Q
    ||||||||||||||| ||   || |||||||||  |||| |||||||||||||   |||| ||| ||| ||||  ||||| ||||||||| ||| ||||     
T  26570871 aaccaagttgtttgggctctagtggcaaggagcgacttttaaggatgtatctgggaaatatcgggttcaattcctagggggaacaacgcttggccagtgt 26570970  T
Q  275 gtatgtctctacgcatgagccggattagtc 304  Q
    |||||  |||||||||||||||||||||||    
T  26570971 gtatgcatctacgcatgagccggattagtc 26571000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 176 - 311
Target Start/End: Complemental strand, 33401963 - 33401826
Alignment:
Q  176 taaccaagttgtttggacttcggtagcaaggagcttctttcaaggatgtatctgaagaataccgg-ttcgattctcaggggaaacaacgctcggc-agtg 273  Q
    |||| ||||||||||| || | || |||||||||| |||||||||| |||   |  ||||||||| ||||||| ||||||| |||||| || | | ||||    
T  33401963 taactaagttgtttgggctccagtggcaaggagctcctttcaaggacgtactcggggaataccgggttcgattttcagggggaacaacacttgaccagtg 33401864  T
Q  274 cgtatgtctctacgcatgagccggattagtcacccacc 311  Q
     | ||| ||||||||||||| |||||||||| ||||||    
T  33401863 tgcatgcctctacgcatgagtcggattagtcgcccacc 33401826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 241 - 333
Target Start/End: Original strand, 43032913 - 43033006
Alignment:
Q  241 ttcgattctcaggggaaacaacgctcggc-agtgcgtatgtctctacgcatgagccggattagtcacccaccagtagtgggtcatagaccggtg 333  Q
    |||||||| |||||| ||||||||| ||| |||||| ||| |||||| || |||||||||||||| ||||||  | |||||||| | |||||||    
T  43032913 ttcgattcccagggggaacaacgcttggccagtgcgcatgcctctacacacgagccggattagtcgcccacctttggtgggtcagaaaccggtg 43033006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 177 - 304
Target Start/End: Original strand, 45521116 - 45521244
Alignment:
Q  177 aaccaagttgtttggacttcggtagcaaggagcttctttcaaggatgtatctgaagaataccgg-ttcgattctcaggggaaacaacgctcgg-cagtgc 274  Q
    |||||||||| |||| || | || |||||||| |  || |||||||||| | |  ||||||||| |||||||| |||||||| |||| || |  ||||||    
T  45521116 aaccaagttgcttgggctccagtggcaaggagttcattccaaggatgtacccggggaataccgggttcgattcccaggggaa-caacacttgatcagtgc 45521214  T
Q  275 gtatgtctctacgcatgagccggattagtc 304  Q
    | ||| ||||||||||||||||||||||||    
T  45521215 gcatgcctctacgcatgagccggattagtc 45521244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0170 (Bit Score: 54; Significance: 2e-21; HSPs: 1)
Name: scaffold0170
Description:

Target: scaffold0170; HSP #1
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 177 - 304
Target Start/End: Original strand, 9791 - 9920
Alignment:
Q  177 aaccaagttgtttggacttcggtagcaaggagcttctttcaaggatgtatctgaagaataccgg-ttcgattctcaggggaaacaacgctcgg-cagtgc 274  Q
    ||||||||||||| |||| | ||  ||||||||| ||| ||||||||||||||| ||||||||| |||||||  |||||| ||||||||| || ||||||    
T  9791 aaccaagttgttttgactccagtgacaaggagctccttccaaggatgtatctgaggaataccggattcgatttccagggggaacaacgcttggccagtgc 9890  T
Q  275 gtatgtctctacgcatgagccggattagtc 304  Q
    | ||| ||||||||| ||||||||||||||    
T  9891 gcatgcctctacgcacgagccggattagtc 9920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 53; Significance: 6e-21; HSPs: 32)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 181 - 311
Target Start/End: Complemental strand, 5473007 - 5472875
Alignment:
Q  181 aagttgtttggacttcggtagcaaggagcttctttcaaggatgtatctgaagaatacc-ggttcgattctcaggggaaacaacgctcggc-agtgcgtat 278  Q
    ||||||||||| || | || ||||||||||  ||||||||| ||||| |  ||||||| |||| |||||||||||||||||||||| ||| |||||| ||    
T  5473007 aagttgtttgggctccagtggcaaggagctcatttcaaggacgtatccggggaataccaggtttgattctcaggggaaacaacgcttggccagtgcgcat 5472908  T
Q  279 gtctctacgcatgagccggattagtcacccacc 311  Q
    | ||||||||| |||||||||||||| ||||||    
T  5472907 gcctctacgcacgagccggattagtcgcccacc 5472875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 177 - 304
Target Start/End: Original strand, 6779159 - 6779288
Alignment:
Q  177 aaccaagttgtttggacttcggtagcaaggagcttctttcaaggatgtatctgaagaatacc-ggttcgattctcaggggaaacaac-gctcggcagtgc 274  Q
    ||||||||||||||| || | || |||||||||||||| |||||| ||| ||| |||||||| |||||||||| |||||| ||||||  || | ||||||    
T  6779159 aaccaagttgtttgggctccagtggcaaggagcttcttccaaggacgtacctggagaataccgggttcgattcccagggggaacaacacctggccagtgc 6779258  T
Q  275 gtatgtctctacgcatgagccggattagtc 304  Q
    | ||| ||||| ||||||||||||||||||    
T  6779259 gcatgcctctatgcatgagccggattagtc 6779288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 174 - 304
Target Start/End: Original strand, 1446771 - 1446903
Alignment:
Q  174 aataaccaagttgtttggacttcggtagcaaggagcttctttcaaggatgtatctgaagaataccgg-ttcgattctcaggggaaacaacgctcggc-ag 271  Q
    ||||||||||||| |||| || | || |||||||||| ||| |||||| ||||| |  ||||||||| |||||||| |||||| |||||| || ||| ||    
T  1446771 aataaccaagttgcttgggctccagtggcaaggagctccttccaaggacgtatccggggaataccgggttcgattcccagggggaacaacacttggccag 1446870  T
Q  272 tgcgtatgtctctacgcatgagccggattagtc 304  Q
    |||| ||| ||||||||||||||||||||||||    
T  1446871 tgcgcatgcctctacgcatgagccggattagtc 1446903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 175 - 301
Target Start/End: Original strand, 38075379 - 38075507
Alignment:
Q  175 ataaccaagttgtttggacttcggtagcaaggagcttctttcaaggatgtatctgaagaataccgg-ttcgattctcaggggaaacaacgctcgg-cagt 272  Q
    ||||||||||||||||| || | |  |||||||| | ||| |||||| ||||  | |||||||||| ||||||||||||||||||||||||| || ||||    
T  38075379 ataaccaagttgtttgggctccagcggcaaggagttccttccaaggacgtattcggagaataccgggttcgattctcaggggaaacaacgcttggccagt 38075478  T
Q  273 gcgtatgtctctacgcatgagccggatta 301  Q
    ||| ||| |||||||||||||||| ||||    
T  38075479 gcgcatgcctctacgcatgagccgaatta 38075507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 171 - 304
Target Start/End: Original strand, 29895729 - 29895864
Alignment:
Q  171 taaaataaccaagttgtttggacttcggtagcaaggagcttctttcaaggatgtatctgaagaataccgg-ttcgattctcaggggaaacaacgctcggc 269  Q
    |||| ||||||||||| |||| || | || |||||||||| ||| |||||| ||||| |  ||||||||| |||||||| |||||| |||||| || |||    
T  29895729 taaattaaccaagttgcttgggctccagtggcaaggagctccttccaaggacgtatccggggaataccgggttcgattcccagggggaacaacacttggc 29895828  T
Q  270 -agtgcgtatgtctctacgcatgagccggattagtc 304  Q
     |||||| ||| ||||||||||||||||||||||||    
T  29895829 cagtgcgcatgcctctacgcatgagccggattagtc 29895864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 239 - 333
Target Start/End: Original strand, 43468358 - 43468453
Alignment:
Q  239 ggttcgattctcaggggaaacaacgctcggc-agtgcgtatgtctctacgcatgagccggattagtcacccaccagtagtgggtcatagaccggtg 333  Q
    |||||||||| |||||| ||||||||| ||| |||||  || ||||||||||||||||||||||||| ||||||||| |||||||  |||||||||    
T  43468358 ggttcgattcccagggggaacaacgcttggccagtgcacatttctctacgcatgagccggattagtcgcccaccagtggtgggtcggagaccggtg 43468453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 176 - 333
Target Start/End: Original strand, 15829646 - 15829805
Alignment:
Q  176 taaccaagttgtttggacttcggtagcaaggagcttctttcaaggatgtatctgaagaata-ccggttcgattctcaggggaaacaacgctcgg-cagtg 273  Q
    |||||||||||||||| || | ||  |||||||||||||||||||| ||||| | |||||| || ||| |||| ||||||||| |||| || || |||||    
T  15829646 taaccaagttgtttgggctccagtgacaaggagcttctttcaaggacgtatccggagaatatccagtttgattttcaggggaatcaacacttggccagtg 15829745  T
Q  274 cgtatgtctctacgcatgagccggattagtcacccaccagtagtgggtcatagaccggtg 333  Q
    || |||  |||| ||||||||||||||||||  |||||| | |||| ||| | |||||||    
T  15829746 cgcatgcttctaggcatgagccggattagtcctccaccattggtggatcagaaaccggtg 15829805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 180 - 304
Target Start/End: Complemental strand, 40781021 - 40780895
Alignment:
Q  180 caagttgtttggacttcggtagcaaggagcttctttcaaggatgtatctgaagaataccgg-ttcgattctcaggggaaacaacgctcgg-cagtgcgta 277  Q
    |||||||| ||| || | || ||||||||||||||| ||||| ||||  | | |||| ||| ||||||||||| ||| ||||||||| || ||||||| |    
T  40781021 caagttgtctgggctccagtggcaaggagcttcttttaaggacgtattcggaaaatatcgggttcgattctcaaggggaacaacgcttggtcagtgcgca 40780922  T
Q  278 tgtctctacgcatgagccggattagtc 304  Q
    || ||||||||||||||||||||||||    
T  40780921 tgcctctacgcatgagccggattagtc 40780895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 182 - 301
Target Start/End: Original strand, 20421727 - 20421847
Alignment:
Q  182 agttgtttggacttcggtagcaaggagcttctttcaaggatgtatctgaagaataccggttcgattctcaggggaaacaacgctcggc-agtgcgtatgt 280  Q
    ||||| |||| |||| || |||||||||| ||||||| || |||||||  |||||| |||||||||  |||||| |||||| || ||| |||||| |||     
T  20421727 agttgcttgggcttcagtggcaaggagctcctttcaaagacgtatctggggaatactggttcgatttccagggggaacaacacttggccagtgcgcatgc 20421826  T
Q  281 ctctacgcatgagccggatta 301  Q
    ||||||||||||||| |||||    
T  20421827 ctctacgcatgagccagatta 20421847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 177 - 311
Target Start/End: Original strand, 38165975 - 38166111
Alignment:
Q  177 aaccaagttgtttggacttcggtagcaaggagcttctttcaaggatgtatctgaagaataccgg-ttcgattctcaggggaaacaacgctcggc-agtgc 274  Q
    ||||||||||||||| || |  | |||||||||| ||| |||||| ||||| |  |||||| || || ||||| |||||| ||||||||| ||| |||||    
T  38165975 aaccaagttgtttgggctccactggcaaggagctccttccaaggacgtatccggggaatactgggttggattcccagggggaacaacgcttggccagtgc 38166074  T
Q  275 gtatgtctctacgcatgagccggattagtcacccacc 311  Q
    | ||| ||||||||| |||||||||||||| ||||||    
T  38166075 gcatggctctacgcacgagccggattagtcgcccacc 38166111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 176 - 312
Target Start/End: Complemental strand, 41339559 - 41339421
Alignment:
Q  176 taaccaagttgtttggacttcggtagcaaggagcttctttcaaggatgtatctgaagaatacc-ggttcgattctcaggggaaacaacgctcgg-cagtg 273  Q
    |||||||||||||||| ||   || |||||||||| ||| |||||| ||| | | |||||||| ||||||| || || ||| ||||||||| || |||||    
T  41339559 taaccaagttgtttgggctctagtggcaaggagctccttccaaggacgtacccggagaataccgggttcgactcccaaggggaacaacgcttggccagtg 41339460  T
Q  274 cgtatgtctctacgcatgagccggattagtcacccacca 312  Q
     ||||| ||||||||| ||| |||||||||| |||||||    
T  41339459 tgtatgcctctacgcacgagacggattagtcgcccacca 41339421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 173 - 301
Target Start/End: Original strand, 53599004 - 53599134
Alignment:
Q  173 aaataaccaagttgtttggacttcggtagcaaggagcttctttcaaggatgtatctgaagaataccgg-ttcgattctcaggggaaacaacgctcggc-a 270  Q
    ||||||||||||||||||| || |  | |||||||||| ||| |||||| ||| | |  ||||||||| |||||||| |||| | ||||||| | ||| |    
T  53599004 aaataaccaagttgtttgggctccattggcaaggagctccttccaaggacgtacccggggaataccgggttcgattcccaggaggaacaacgtttggcca 53599103  T
Q  271 gtgcgtatgtctctacgcatgagccggatta 301  Q
    ||||| ||| |||||||||||||||||||||    
T  53599104 gtgcgcatgcctctacgcatgagccggatta 53599134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 239 - 303
Target Start/End: Complemental strand, 26237522 - 26237457
Alignment:
Q  239 ggttcgattctcaggggaaacaacgctcgg-cagtgcgtatgtctctacgcatgagccggattagt 303  Q
    ||||||||||||||||||||||||| | |  |||||||||||||| |||||||||| |||||||||    
T  26237522 ggttcgattctcaggggaaacaacgtttgatcagtgcgtatgtctttacgcatgagtcggattagt 26237457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 239 - 322
Target Start/End: Original strand, 29588747 - 29588831
Alignment:
Q  239 ggttcgattctcaggggaaacaacgctcggc-agtgcgtatgtctctacgcatgagccggattagtcacccaccagtagtgggtc 322  Q
    |||||||||| |||||||||||| ||| ||| |||||| ||| ||||||||| ||||||||||||| | |||||| | |||||||    
T  29588747 ggttcgattcccaggggaaacaaagcttggctagtgcgcatgcctctacgcacgagccggattagttatccaccattggtgggtc 29588831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 201 - 322
Target Start/End: Original strand, 47078430 - 47078553
Alignment:
Q  201 gcaaggagcttctttcaaggatgtatctgaagaataccgg-ttcgattctcaggggaaacaacgctcggc-agtgcgtatgtctctacgcatgagccgga 298  Q
    |||||||||| ||| |||||| ||| | |  ||||||||| |||||||| |||||| ||||||||| ||| |||||  ||| ||||||||| ||||||||    
T  47078430 gcaaggagctccttccaaggacgtacccggggaataccgggttcgattcccagggggaacaacgcttggccagtgcacatgcctctacgcacgagccgga 47078529  T
Q  299 ttagtcacccaccagtagtgggtc 322  Q
    |||||| | ||||| | |||||||    
T  47078530 ttagtcgctcaccattggtgggtc 47078553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 176 - 304
Target Start/End: Original strand, 8888969 - 8889099
Alignment:
Q  176 taaccaagttgtttggacttcggtagcaaggagcttctttcaaggatgtatctgaagaataccgg-ttcgattctcaggggaaacaacgctcgg-cagtg 273  Q
    |||||||||||||||| ||   |  |||||||||| |||  ||||| ||||| |  ||||||||| ||||||||  ||||| |||||| || || |||||    
T  8888969 taaccaagttgtttgggctctagcggcaaggagctccttctaaggacgtatccggggaataccgggttcgattcctagggggaacaacacttgggcagtg 8889068  T
Q  274 cgtatgtctctacgcatgagccggattagtc 304  Q
    || ||| ||||||||||||||||||||||||    
T  8889069 cgcatggctctacgcatgagccggattagtc 8889099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 239 - 304
Target Start/End: Original strand, 31588695 - 31588763
Alignment:
Q  239 ggttcgattctcaggggaaacaacgctc---ggcagtgcgtatgtctctacgcatgagccggattagtc 304  Q
    |||| ||||| ||| |||||||||||||   | ||||||| ||||||||||||||||||||||||||||    
T  31588695 ggtttgattcccagaggaaacaacgctcttggccagtgcgcatgtctctacgcatgagccggattagtc 31588763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 239 - 304
Target Start/End: Complemental strand, 36145315 - 36145249
Alignment:
Q  239 ggttcgattctcaggggaaacaacgctcgg-cagtgcgtatgtctctacgcatgagccggattagtc 304  Q
    |||||||||| |||||||||||||||| |  ||||||| ||| |||||| |||||||||||||||||    
T  36145315 ggttcgattcccaggggaaacaacgcttgatcagtgcgcatgcctctacacatgagccggattagtc 36145249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 176 - 304
Target Start/End: Original strand, 52950029 - 52950159
Alignment:
Q  176 taaccaagttgtttggacttcggtagcaaggagcttctttcaaggatgtatctgaagaata-ccggttcgattctcaggggaaacaacgctcgg-cagtg 273  Q
    |||||||||||||||| ||   || |||||||||| ||| |||||| ||| |||  ||||| | |||||||||| |||||| ||||||||| || |||||    
T  52950029 taaccaagttgtttgggctctagtggcaaggagctccttccaaggacgtacctggggaatatcgggttcgattcccagggggaacaacgcttggccagtg 52950128  T
Q  274 cgtatgtctctacgcatgagccggattagtc 304  Q
    || ||| |||||| ||||| || ||||||||    
T  52950129 cgcatgactctacacatgaaccagattagtc 52950159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 239 - 311
Target Start/End: Complemental strand, 1940874 - 1940804
Alignment:
Q  239 ggttcgattctcaggggaaacaacgctcggcagtgcgtatgtctctacgcatgagccggattagtcacccacc 311  Q
    |||||||||| |||||| ||||||||| ||  ||||| ||| ||||||||| |||||||||||||| ||||||    
T  1940874 ggttcgattcccagggggaacaacgcttgg--gtgcgcatgcctctacgcacgagccggattagtcgcccacc 1940804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 239 - 311
Target Start/End: Complemental strand, 7246746 - 7246673
Alignment:
Q  239 ggttcgattctcaggggaaacaacgctcggc-agtgcgtatgtctctacgcatgagccggattagtcacccacc 311  Q
    ||||||||||  || || ||||||||| ||| |||||| ||| |||||||||||||||||||||||| ||||||    
T  7246746 ggttcgattcctagtgggaacaacgcttggccagtgcgcatgcctctacgcatgagccggattagtcgcccacc 7246673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 239 - 311
Target Start/End: Original strand, 24166461 - 24166534
Alignment:
Q  239 ggttcgattctcaggggaaacaacgctcggc-agtgcgtatgtctctacgcatgagccggattagtcacccacc 311  Q
    |||||||||| || ||||||||||| | ||| |||||| ||| ||||||||| ||||| |||||||||||||||    
T  24166461 ggttcgattcccaagggaaacaacgtttggccagtgcgcatgcctctacgcacgagccagattagtcacccacc 24166534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 177 - 263
Target Start/End: Original strand, 4736545 - 4736632
Alignment:
Q  177 aaccaagttgtttggacttcggtagcaaggagcttctttcaaggatgtatctgaagaatacc-ggttcgattctcaggggaaacaacg 263  Q
    ||||||||||||||  || | || |||| ||||| |||||||||||||| | || ||||||| ||||| |||||||| ||||||||||    
T  4736545 aaccaagttgtttgagctccagtggcaatgagctcctttcaaggatgtacccgaggaataccgggttcaattctcagtggaaacaacg 4736632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 241 - 311
Target Start/End: Complemental strand, 48317373 - 48317302
Alignment:
Q  241 ttcgattctcaggggaaacaacgctcgg-cagtgcgtatgtctctacgcatgagccggattagtcacccacc 311  Q
    ||||||| ||||| | ||||||||| || ||||| ||||| ||||||||| |||||||||||||| ||||||    
T  48317373 ttcgattttcaggaggaacaacgcttggtcagtgtgtatgcctctacgcacgagccggattagtcgcccacc 48317302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 239 - 304
Target Start/End: Original strand, 16450311 - 16450377
Alignment:
Q  239 ggttcgattctcaggggaaacaacgctcggc-agtgcgtatgtctctacgcatgagccggattagtc 304  Q
    |||||||||| |||||| ||||||||| ||| |||||  ||| ||||||||||||||| ||||||||    
T  16450311 ggttcgattcccagggggaacaacgcttggccagtgcacatgcctctacgcatgagccagattagtc 16450377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 231 - 311
Target Start/End: Complemental strand, 20532518 - 20532436
Alignment:
Q  231 agaataccg-gttcgattctcaggggaaacaacgctcggc-agtgcgtatgtctctacgcatgagccggattagtcacccacc 311  Q
    ||||||||| ||||||||  |||| | ||||||||| ||| |||||| ||| ||||||||||||||||||| |||| ||||||    
T  20532518 agaataccgagttcgatttccaggaggaacaacgcttggccagtgcgcatgcctctacgcatgagccggataagtcgcccacc 20532436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 239 - 304
Target Start/End: Complemental strand, 42722677 - 42722611
Alignment:
Q  239 ggttcgattctcaggggaaacaacgctcggc-agtgcgtatgtctctacgcatgagccggattagtc 304  Q
    ||||| |||| |||| | ||||||||| ||| |||||| ||| ||||||||||||||||||||||||    
T  42722677 ggttcaattcccaggaggaacaacgcttggccagtgcgcatgcctctacgcatgagccggattagtc 42722611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 176 - 304
Target Start/End: Complemental strand, 49260829 - 49260699
Alignment:
Q  176 taaccaagttgtttggacttcggtagcaaggagcttctttcaaggatgtatctgaagaataccgg-ttcgattctcaggggaaacaacgctcggc-agtg 273  Q
    ||||||||||| ||||| |||  | ||||||| || ||| |||||||||||| |  |||||| |  ||| |||| || ||| ||||||||| ||| ||||    
T  49260829 taaccaagttgcttggatttcaatggcaaggaactccttccaaggatgtatccggggaatactgaattcaattcccaaggggaacaacgcttggccagtg 49260730  T
Q  274 cgtatgtctctacgcatgagccggattagtc 304  Q
    || ||| ||||||||| ||||||||||||||    
T  49260729 cgcatgcctctacgcacgagccggattagtc 49260699  T

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Target: chr4; HSP #29
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 177 - 301
Target Start/End: Original strand, 55920982 - 55921108
Alignment:
Q  177 aaccaagttgtttggacttcggtagcaaggagcttctttcaaggatgtatctgaagaataccgg-ttcgattctcaggggaaacaacgctcgg-cagtgc 274  Q
    |||||||||| |||| || | || |||||||||| ||| |||||| | | | |  ||||||||| |||||||| |||||| |||||| || || ||||||    
T  55920982 aaccaagttgcttgggctccagtggcaaggagctccttccaaggacgcacccggggaataccgggttcgattcccagggggaacaacacttggtcagtgc 55921081  T
Q  275 gtatgtctctacgcatgagccggatta 301  Q
    | ||| ||||||| |||||||||||||    
T  55921082 gcatgcctctacgtatgagccggatta 55921108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 269 - 310
Target Start/End: Original strand, 14077988 - 14078029
Alignment:
Q  269 cagtgcgtatgtctctacgcatgagccggattagtcacccac 310  Q
    ||||||| ||||||||||||| ||| ||||||||||||||||    
T  14077988 cagtgcgcatgtctctacgcacgagtcggattagtcacccac 14078029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 239 - 311
Target Start/End: Original strand, 30317244 - 30317317
Alignment:
Q  239 ggttcgattctcaggggaaacaacgctcgg-cagtgcgtatgtctctacgcatgagccggattagtcacccacc 311  Q
    |||||||||||||| || ||||||||| || |||| || ||| ||||||||| |||||| ||||||| ||||||    
T  30317244 ggttcgattctcagagggaacaacgcttggccagtacgaatgcctctacgcacgagccgaattagtcgcccacc 30317317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 281 - 322
Target Start/End: Original strand, 50485997 - 50486038
Alignment:
Q  281 ctctacgcatgagccggattagtcacccaccagtagtgggtc 322  Q
    ||||||||| |||||||||||||| ||||||| |||||||||    
T  50485997 ctctacgcacgagccggattagtcgcccaccattagtgggtc 50486038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 51; Significance: 1e-19; HSPs: 23)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 180 - 304
Target Start/End: Original strand, 1797409 - 1797535
Alignment:
Q  180 caagttgtttggacttcggtagcaaggagcttctttcaaggatgtatctgaagaataccgg-ttcgattctcaggggaaacaacgctcggc-agtgcgta 277  Q
    ||||||| |||| || | || |||||||||| ||| |||||| ||||| || ||||||||| |||||||| |||||||||||||||| ||| |||||| |    
T  1797409 caagttgcttgggctccagtggcaaggagctccttccaaggacgtatccgaggaataccgggttcgattcccaggggaaacaacgcttggccagtgcgca 1797508  T
Q  278 tgtctctacgcatgagccggattagtc 304  Q
    |||||||||||| |||||||| |||||    
T  1797509 tgtctctacgcacgagccggactagtc 1797535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 175 - 322
Target Start/End: Original strand, 48804627 - 48804776
Alignment:
Q  175 ataaccaagttgtttggacttcggtagcaaggagcttctttcaaggatgtatctgaagaataccgg-ttcgattctcaggggaaacaacgctcggc-agt 272  Q
    |||||||||||| |||| || | || |||||||||| ||| |||||| ||||| |  ||||||||| |||||||| || ||| |||||| || ||| |||    
T  48804627 ataaccaagttgcttgggctccagtggcaaggagctccttccaaggacgtatccggggaataccgggttcgattcccaaggggaacaacacttggccagt 48804726  T
Q  273 gcgtatgtctctacgcatgagccggattagtcacccaccagtagtgggtc 322  Q
    ||| ||| ||||||||||||||||||||||||  |||||| | |||||||    
T  48804727 gcgcatgcctctacgcatgagccggattagtcgtccaccattggtgggtc 48804776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 179 - 312
Target Start/End: Original strand, 34659174 - 34659309
Alignment:
Q  179 ccaagttgtttggacttcggtagcaaggagcttctttcaaggatgtatctgaagaataccgg-ttcgattctcaggggaaacaacgctcggc-agtgcgt 276  Q
    ||||||||||||| || | || |||||||||| ||| || ||||||| | |  ||||||||| ||||||||||| ||| ||||||||| | | ||||||     
T  34659174 ccaagttgtttgggctccagtggcaaggagctccttccagggatgtacccggggaataccgggttcgattctcaaggggaacaacgcttgaccagtgcgc 34659273  T
Q  277 atgtctctacgcatgagccggattagtcacccacca 312  Q
    ||| ||||||||| |||||||||||||| |||||||    
T  34659274 atgcctctacgcacgagccggattagtcgcccacca 34659309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 177 - 304
Target Start/End: Original strand, 13095804 - 13095933
Alignment:
Q  177 aaccaagttgtttggacttcggtagcaaggagcttctttcaaggatgtatctgaagaataccgg-ttcgattctcaggggaaacaacgctcggc-agtgc 274  Q
    |||||||||| |||| || | || |||||||||| |||||||||| ||| | |  ||||||||| ||| |||| |||||| |||||| || ||| |||||    
T  13095804 aaccaagttgcttgggctcccgtggcaaggagctcctttcaaggacgtacccggggaataccgggttctattcccagggggaacaacacttggccagtgc 13095903  T
Q  275 gtatgtctctacgcatgagccggattagtc 304  Q
    | ||| ||||||||||||||||||||||||    
T  13095904 gcatgcctctacgcatgagccggattagtc 13095933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 239 - 311
Target Start/End: Complemental strand, 38578967 - 38578894
Alignment:
Q  239 ggttcgattctcaggggaaacaacgctcggc-agtgcgtatgtctctacgcatgagccggattagtcacccacc 311  Q
    |||||||||| |||||| ||||||||| ||| |||||| ||| |||||||||||||||||||||||| ||||||    
T  38578967 ggttcgattcccagggggaacaacgcttggccagtgcgcatgcctctacgcatgagccggattagtcgcccacc 38578894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 176 - 311
Target Start/End: Complemental strand, 42210426 - 42210289
Alignment:
Q  176 taaccaagttgtttggacttcggtagcaaggagcttctttcaaggatgtatctgaagaataccgg-ttcgattctcaggggaaacaacgctcggc-agtg 273  Q
    ||||||||||| || |||| | || ||||||||||  || |||||| ||||| || ||||||||| |||||||| ||| | |||||||| | ||| ||||    
T  42210426 taaccaagttgcttagactccagtggcaaggagctctttccaaggacgtatccgaggaataccggcttcgattcccagtgaaaacaacgtttggccagtg 42210327  T
Q  274 cgtatgtctctacgcatgagccggattagtcacccacc 311  Q
    || ||| ||||||||| ||||||||||| |||||||||    
T  42210326 cgcatgcctctacgcacgagccggattaatcacccacc 42210289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 176 - 304
Target Start/End: Complemental strand, 17748546 - 17748416
Alignment:
Q  176 taaccaagttgtttggacttcggtagcaaggagcttctttcaaggatgtatctgaagaataccgg-ttcgattctcaggggaaacaacgctcggc-agtg 273  Q
    |||||||||||||||| ||   || ||||| |||||||| |||||| ||||  |  ||||||||| |||||||| |||||| ||||||||| ||| ||||    
T  17748546 taaccaagttgtttgggctctagtggcaagcagcttcttccaaggacgtattcggggaataccgggttcgattcccagggggaacaacgcttggccagtg 17748447  T
Q  274 cgtatgtctctacgcatgagccggattagtc 304  Q
    || ||| ||||||| | ||||||||||||||    
T  17748446 cgcatgcctctacgtacgagccggattagtc 17748416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 201 - 305
Target Start/End: Complemental strand, 43862111 - 43862005
Alignment:
Q  201 gcaaggagcttctttcaaggatgtatctgaagaataccgg-ttcgattctcaggggaaacaacgctcggc-agtgcgtatgtctctacgcatgagccgga 298  Q
    ||||||||||  || ||| || |||||||  ||||||||| |||||||| |||||| ||||||| | ||| |||||| ||| ||||||||||||||||||    
T  43862111 gcaaggagctctttccaaagacgtatctggggaataccgggttcgattcccagggggaacaacgtttggccagtgcgcatgcctctacgcatgagccgga 43862012  T
Q  299 ttagtca 305  Q
    |||||||    
T  43862011 ttagtca 43862005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 176 - 304
Target Start/End: Original strand, 39420783 - 39420912
Alignment:
Q  176 taaccaagttgtttggacttcggtagcaaggagcttctttcaaggatgtatctgaagaataccggttcgattctcaggggaaacaacgctcggc-agtgc 274  Q
    ||||||||||| |||| ||   || |||||||||| |||||||||| ||| | |  |||||||||||||| || ||  || ||||||||| ||| |||||    
T  39420783 taaccaagttgcttgggctctagtggcaaggagctcctttcaaggaggtacccggggaataccggttcgaatcccaaagggaacaacgcttggccagtgc 39420882  T
Q  275 gtatgtctctacgcatgagccggattagtc 304  Q
    |  || ||||||||||||||||||||||||    
T  39420883 gcgtgcctctacgcatgagccggattagtc 39420912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 177 - 304
Target Start/End: Complemental strand, 43346942 - 43346813
Alignment:
Q  177 aaccaagttgtttggacttcggtagcaaggagcttctttcaaggatgtatctgaagaatacc-ggttcgattctcaggggaaacaacgctcgg-cagtgc 274  Q
    |||||||||||||||||| | || |||||||||| ||| ||| || |||||||  ||||||| ||||| ||||||| ||| |||||| || || | ||||    
T  43346942 aaccaagttgtttggactccagtggcaaggagctccttccaaagacgtatctggggaataccgggttcaattctcaaggggaacaacacttggccggtgc 43346843  T
Q  275 gtatgtctctacgcatgagccggattagtc 304  Q
    | ||| ||||||| | ||||||||||||||    
T  43346842 gcatgcctctacgtacgagccggattagtc 43346813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 177 - 311
Target Start/End: Original strand, 1605887 - 1606023
Alignment:
Q  177 aaccaagttgtttggacttcggtagcaaggagcttctttcaaggatgtatctgaagaatacc-ggttcgattctcaggggaaacaacgctcggc-agtgc 274  Q
    |||||||||||||||||| |  |  ||||||||| ||| |||||| ||| | | |||||||| |||||||||  |||||| ||||||||| ||| |||||    
T  1605887 aaccaagttgtttggactccaatgacaaggagctccttccaaggacgtacccggagaatacctggttcgatttccagggggaacaacgcttggccagtgc 1605986  T
Q  275 gtatgtctctacgcatgagccggattagtcacccacc 311  Q
      ||| ||||| || ||||||||||||||| ||||||    
T  1605987 acatgcctctaggcttgagccggattagtcgcccacc 1606023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 176 - 322
Target Start/End: Complemental strand, 10048040 - 10047892
Alignment:
Q  176 taaccaagttgtttggacttcggtagcaaggagcttctttcaaggatgtatctgaagaatacc-ggttcgattctcaggggaaacaacgctcgg-cagtg 273  Q
    ||||||||||| ||| ||| | || |||||||||| ||| |||||| ||||| |  ||||||| |||||||||| |||||| |||||| || || |||||    
T  10048040 taaccaagttgcttgaactccagtggcaaggagctccttccaaggacgtatccggggaataccgggttcgattcccagggggaacaacacttggccagtg 10047941  T
Q  274 cgtatgtctctacgcatgagccggattagtcacccaccagtagtgggtc 322  Q
    || | | |||||||||||||| | |||||||  |||||| | |||||||    
T  10047940 cgcaggcctctacgcatgagcagaattagtcgtccaccattggtgggtc 10047892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 177 - 303
Target Start/End: Original strand, 43925458 - 43925586
Alignment:
Q  177 aaccaagttgtttggacttcggtagcaaggagcttctttcaaggatgtatctgaagaataccgg-ttcgattctcaggggaaacaacgctcgg-cagtgc 274  Q
    |||||||||| |||| || | || |||||||||| ||| |||||| ||| | |  ||||||||| |||||||| |||||| |||||| || || ||||||    
T  43925458 aaccaagttgcttgggctccagtggcaaggagctccttccaaggacgtacccggggaataccgggttcgattcccagggggaacaacacttggtcagtgc 43925557  T
Q  275 gtatgtctctacgcatgagccggattagt 303  Q
    | ||| |||||||||||||| ||||||||    
T  43925558 gcatgcctctacgcatgagctggattagt 43925586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 269 - 322
Target Start/End: Original strand, 365180 - 365233
Alignment:
Q  269 cagtgcgtatgtctctacgcatgagccggattagtcacccaccagtagtgggtc 322  Q
    ||||||| ||| ||||||||||||||| ||||||| |||||||||| |||||||    
T  365180 cagtgcgcatgcctctacgcatgagcctgattagtgacccaccagtggtgggtc 365233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 177 - 304
Target Start/End: Original strand, 27028225 - 27028354
Alignment:
Q  177 aaccaagttgtttggacttcggtagcaaggagcttctttcaaggatgtatctgaagaatacc-ggttcgattctcaggggaaacaacgctcgg-cagtgc 274  Q
    |||||||||||||||||| |||| ||||||||||  || |||| | ||| |||   |||||| |||||||||  |||||| |||||| || || ||||||    
T  27028225 aaccaagttgtttggactccggtggcaaggagctcattccaagaacgtacctgggaaataccaggttcgatttccagggggaacaacacttggccagtgc 27028324  T
Q  275 gtatgtctctacgcatgagccggattagtc 304  Q
    | ||| |||||| ||||||| |||||||||    
T  27028325 gcatgcctctacacatgagctggattagtc 27028354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 180 - 323
Target Start/End: Complemental strand, 36619414 - 36619269
Alignment:
Q  180 caagttgtttggacttcggtagcaaggagcttctttcaaggatgtatctgaagaataccgg-ttcgattctcaggggaaacaacgctcggc-agtgcgta 277  Q
    |||||| ||||||||   || ||||||| || ||| |||||| |||| ||  ||||||||| |||||||| |||||| |||||| || | | |||| | |    
T  36619414 caagttatttggactctagtggcaaggaactccttgcaaggacgtatttggggaataccgggttcgattcccagggggaacaacacttgtccagtgtgca 36619315  T
Q  278 tgtctctacgcatgagccggattagtcacccaccagtagtgggtca 323  Q
    || ||||||||||||||||||||||||  |||||| | ||||||||    
T  36619314 tgcctctacgcatgagccggattagtcgtccaccattggtgggtca 36619269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 232 - 322
Target Start/End: Original strand, 16802124 - 16802216
Alignment:
Q  232 gaataccgg-ttcgattctcaggggaaacaacgctcggc-agtgcgtatgtctctacgcatgagccggattagtcacccaccagtagtgggtc 322  Q
    ||||||||| ||||||||| ||| | ||||||| | ||| |||||||||| ||||||||| |||||||||||||| | ||||| | |||||||    
T  16802124 gaataccggattcgattcttaggaggaacaacgattggccagtgcgtatgcctctacgcacgagccggattagtcgctcaccattggtgggtc 16802216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 175 - 304
Target Start/End: Complemental strand, 26423452 - 26423321
Alignment:
Q  175 ataaccaagttgtttggacttcggtagcaaggagcttctttcaaggatgtatctgaagaataccgg-ttcgattctcaggggaaacaacgctcgg-cagt 272  Q
    ||||||||||||||||| || | || ||||| | || ||| |||||| ||| |  | ||||||||| |||||||| |||||||||||||||| || ||||    
T  26423452 ataaccaagttgtttgggctccagtggcaagaaactccttccaaggacgtacccaaggaataccgggttcgattcccaggggaaacaacgcttggccagt 26423353  T
Q  273 gcgtatgtctctacgcatgagccggattagtc 304  Q
    ||   || ||||||||| ||||| ||||||||    
T  26423352 gcacctgcctctacgcacgagccagattagtc 26423321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 176 - 304
Target Start/End: Original strand, 14650262 - 14650392
Alignment:
Q  176 taaccaagttgtttggacttcggtagcaaggagcttctttcaaggatgtatctgaagaataccgg-ttcgattctcaggggaaacaacgctcggc-agtg 273  Q
    |||||||||||||||||||   || |||||||||| ||| |||||| ||| | | |||||| ||| |||||||  |||| | ||||| ||| | | ||||    
T  14650262 taaccaagttgtttggactctagtggcaaggagctccttccaaggacgtacccggagaatatcgggttcgatttccaggaggaacaatgcttgaccagtg 14650361  T
Q  274 cgtatgtctctacgcatgagccggattagtc 304  Q
    | |||| ||||||||||||||||| ||||||    
T  14650362 catatgcctctacgcatgagccgggttagtc 14650392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 239 - 304
Target Start/End: Original strand, 22973976 - 22974042
Alignment:
Q  239 ggttcgattctcaggggaaacaacgctcgg-cagtgcgtatgtctctacgcatgagccggattagtc 304  Q
    ||||||||||||||||| ||||||||| || ||||| | |||  |||||||||||||| ||||||||    
T  22973976 ggttcgattctcagggggaacaacgcttggccagtgtgcatgcgtctacgcatgagccagattagtc 22974042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 176 - 304
Target Start/End: Complemental strand, 45960166 - 45960037
Alignment:
Q  176 taaccaagttgtttggacttcggtagcaaggagcttctttcaaggatgtatctgaagaataccg-gttcgattctcaggggaaacaacgctcgg-cagtg 273  Q
    |||||||||||||||  || | |||||||||||||  || |||||| ||||| |  |||||||| ||| ||||| || ||| |||||| || || |||||    
T  45960166 taaccaagttgtttgagctccagtagcaaggagctctttccaaggacgtatcggg-gaataccgagtttgattcccaagggcaacaacacttggtcagtg 45960068  T
Q  274 cgtatgtctctacgcatgagccggattagtc 304  Q
    || ||| |||||||||| |||||||||||||    
T  45960067 cgcatgcctctacgcataagccggattagtc 45960037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 175 - 322
Target Start/End: Complemental strand, 27875252 - 27875104
Alignment:
Q  175 ataaccaagttgtttggacttcggtagcaaggagcttctttcaaggatgtatctgaagaataccgg-ttcgattctcaggggaaacaacgctcggc-agt 272  Q
    ||||||||||||||||| || | || ||||| |||| ||| |||| | |||||||  ||||||||| |||||||| |||||| || ||| || ||| |||    
T  27875252 ataaccaagttgtttgggctccagtggcaagtagctccttccaag-acgtatctggggaataccggattcgattcccagggggaataacacttggccagt 27875154  T
Q  273 gcgtatgtctctacgcatgagccggattagtcacccaccagtagtgggtc 322  Q
    ||  ||| ||||||||||||| || |||||||  |||||  |||||||||    
T  27875153 gcacatgcctctacgcatgagtcgcattagtcgtccacctttagtgggtc 27875104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 239 - 335
Target Start/End: Original strand, 37514930 - 37515027
Alignment:
Q  239 ggttcgattctcaggggaaacaacgctcgg-cagtgcgtatgtctctacgcatgagccggattagtcacccaccagtagtgggtcatagaccggtgtg 335  Q
    ||||||||| |||| || ||||||| | || ||||||| ||||||||||||| ||||||||||| ||   ||||| |||||||||  | |||||||||    
T  37514930 ggttcgattttcagtgggaacaacgtttggtcagtgcgcatgtctctacgcacgagccggattaatcgttcaccattagtgggtcggaaaccggtgtg 37515027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 51; Significance: 1e-19; HSPs: 26)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 176 - 304
Target Start/End: Original strand, 42086270 - 42086400
Alignment:
Q  176 taaccaagttgtttggacttcggtagcaaggagcttctttcaaggatgtatctgaagaataccgg-ttcgattctcaggggaaacaacgctcggc-agtg 273  Q
    ||||||||||| |||| || |||| |||||||||| ||| |||||| ||| | || ||||||||| |||||||| |||||| ||||||||| | | ||||    
T  42086270 taaccaagttgcttgggctccggtggcaaggagctccttccaaggacgtacccgaggaataccgggttcgattcccagggggaacaacgcttgaccagtg 42086369  T
Q  274 cgtatgtctctacgcatgagccggattagtc 304  Q
    || ||| ||||||||||||||||||||||||    
T  42086370 cgcatgcctctacgcatgagccggattagtc 42086400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 177 - 304
Target Start/End: Original strand, 20525782 - 20525911
Alignment:
Q  177 aaccaagttgtttggacttcggtagcaaggagcttctttcaaggatgtatctgaagaataccgg-ttcgattctcaggggaaacaacgct-cggcagtgc 274  Q
    |||||||||| |||| || | || |||||||||| |||||||||||||||| |  ||||| ||| |||||||| |||| | |||||| || || ||||||    
T  20525782 aaccaagttgcttgggctccagtggcaaggagctcctttcaaggatgtatccggggaatatcgggttcgattcccaggtggaacaacacttcgccagtgc 20525881  T
Q  275 gtatgtctctacgcatgagccggattagtc 304  Q
    | ||| ||||||||||||||||||||||||    
T  20525882 gcatgcctctacgcatgagccggattagtc 20525911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 201 - 304
Target Start/End: Complemental strand, 14588756 - 14588651
Alignment:
Q  201 gcaaggagcttctttcaaggatgtatctgaagaataccgg-ttcgattctcaggggaaacaacgctcggc-agtgcgtatgtctctacgcatgagccgga 298  Q
    ||||||||||||||||||||| |||||||  ||||| ||| ||||||| ||||| | || |||||| | | |||||| ||| ||||||||||||||||||    
T  14588756 gcaaggagcttctttcaaggacgtatctggggaatatcgggttcgattttcaggaggaataacgcttgaccagtgcgcatgcctctacgcatgagccgga 14588657  T
Q  299 ttagtc 304  Q
    ||||||    
T  14588656 ttagtc 14588651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 177 - 304
Target Start/End: Original strand, 19572668 - 19572797
Alignment:
Q  177 aaccaagttgtttggacttcggtagcaaggagcttctttcaaggatgtatctgaagaataccgg-ttcgattctcaggggaaacaacgctcggc-agtgc 274  Q
    |||||||||| |||| || | || |||||||||| ||| |||||| ||||| |  ||||||||| || ||||| |||||| |||||| || ||| |||||    
T  19572668 aaccaagttgcttgggctccagtggcaaggagctccttccaaggacgtatccggggaataccgggttagattcccagggggaacaacacttggccagtgc 19572767  T
Q  275 gtatgtctctacgcatgagccggattagtc 304  Q
    | ||| ||||||||||||||||||||||||    
T  19572768 gcatgcctctacgcatgagccggattagtc 19572797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 176 - 322
Target Start/End: Original strand, 1538374 - 1538522
Alignment:
Q  176 taaccaagttgtttggacttcggtagcaaggagcttctttcaaggatgtatctgaagaataccgg-ttcgattctcaggggaaacaacgctcggc-agtg 273  Q
    |||||||||||||||| || | || |||||||||| ||| | |||| ||||  |  ||||||||| |||||||| |||||| |||||| || ||| ||||    
T  1538374 taaccaagttgtttgggctccagtggcaaggagctccttccgaggacgtattcggggaataccgggttcgattcccagggggaacaacacttggccagtg 1538473  T
Q  274 cgtatgtctctacgcatgagccggattagtcacccaccagtagtgggtc 322  Q
    || ||| ||||||||||||||||||||| ||  |||||| | |||||||    
T  1538474 cgcatgcctctacgcatgagccggattaatcgtccaccattggtgggtc 1538522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 231 - 304
Target Start/End: Original strand, 9805002 - 9805077
Alignment:
Q  231 agaataccgg-ttcgattctcaggggaaacaacgctcggc-agtgcgtatgtctctacgcatgagccggattagtc 304  Q
    |||||||||| |||||||| |||||| ||||||||| ||| |||||| ||| ||||||||||||||||||||||||    
T  9805002 agaataccgggttcgattcccagggggaacaacgcttggccagtgcgcatgcctctacgcatgagccggattagtc 9805077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 176 - 301
Target Start/End: Complemental strand, 18136444 - 18136317
Alignment:
Q  176 taaccaagttgtttggacttcggtagcaaggagcttctttcaaggatgtatctgaagaatacc-ggttcgattctcaggggaaacaacgctcgg-cagtg 273  Q
    |||||||||||||||| || | || |||||||||| ||| ||| || ||||| | |||||||| |||||||||| |||||| |||||| || || |||||    
T  18136444 taaccaagttgtttgggctccagtggcaaggagctccttccaaagacgtatccggagaataccgggttcgattcccagggggaacaacacttggtcagtg 18136345  T
Q  274 cgtatgtctctacgcatgagccggatta 301  Q
     | ||| |||||| ||||||||||||||    
T  18136344 tgcatgcctctacacatgagccggatta 18136317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 177 - 333
Target Start/End: Original strand, 9812816 - 9812974
Alignment:
Q  177 aaccaagttgtttggacttcggtagcaaggagcttctttcaaggatgtatctgaagaatacc-ggttcgattctcaggggaaacaacgctcgg-cagtgc 274  Q
    |||||||||||||||||| | || |||||||||| ||| |||||| ||| | |  ||||||| ||||||||||  ||| | ||||||||| || |||||     
T  9812816 aaccaagttgtttggactccagtggcaaggagctccttccaaggacgtacccggggaataccgggttcgattccgaggaggaacaacgcttggccagtgt 9812915  T
Q  275 gtatgtctctacgcatgagccggattagtcacccaccagtagtgggtcatagaccggtg 333  Q
    | |||  ||||||||||| ||||||||||| ||||||  | |||||||| | |||||||    
T  9812916 gcatgcttctacgcatgaaccggattagtcgcccacctttggtgggtcagaaaccggtg 9812974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 201 - 304
Target Start/End: Complemental strand, 7308503 - 7308398
Alignment:
Q  201 gcaaggagcttctttcaaggatgtatctgaagaataccgg-ttcgattctcaggggaaacaacgctcgg-cagtgcgtatgtctctacgcatgagccgga 298  Q
    ||||||||||  || |||||| |||| ||| ||||| ||| |||||||| |||||| ||||||||| || ||||||  ||| ||||||||||||||||||    
T  7308503 gcaaggagctcattccaaggacgtatttgaggaatatcgggttcgattcccagggggaacaacgcttgggcagtgcacatgcctctacgcatgagccgga 7308404  T
Q  299 ttagtc 304  Q
    ||||||    
T  7308403 ttagtc 7308398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 177 - 311
Target Start/End: Original strand, 7866525 - 7866661
Alignment:
Q  177 aaccaagttgtttggacttcggtagcaaggagcttctttcaaggatgtatctgaagaataccgg-ttcgattctcaggggaaacaacgctcggc-agtgc 274  Q
    |||||||||| ||||||| | || |||||||||| ||| |||||| ||| | || ||||||||| ||||||||  ||| | ||||||||| ||| ||||     
T  7866525 aaccaagttgcttggactccagtggcaaggagctccttccaaggacgtacccgaggaataccgggttcgattccgaggaggaacaacgcttggccagtgt 7866624  T
Q  275 gtatgtctctacgcatgagccggattagtcacccacc 311  Q
    | ||| ||||||||| || ||||||||||| ||||||    
T  7866625 gcatgcctctacgcacgaaccggattagtcgcccacc 7866661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 177 - 333
Target Start/End: Original strand, 12704958 - 12705116
Alignment:
Q  177 aaccaagttgtttggacttcggtagcaaggagcttctttcaaggatgtatctgaagaatacc-ggttcgattctcaggggaaacaacgctcg-gcagtgc 274  Q
    |||||||||||||||||| | || |||||||||| ||| |||||| ||| | |  ||||||| ||||||||||  ||| | ||||||||| |  |||||     
T  12704958 aaccaagttgtttggactccagtggcaaggagctccttccaaggacgtacccggggaataccgggttcgattccgaggaggaacaacgcttgaccagtgt 12705057  T
Q  275 gtatgtctctacgcatgagccggattagtcacccaccagtagtgggtcatagaccggtg 333  Q
    | |||  ||||||||||| ||||||||||| ||||||  | |||||||| | |||||||    
T  12705058 gcatgcttctacgcatgaaccggattagtcgcccacctttggtgggtcagaaaccggtg 12705116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 177 - 333
Target Start/End: Original strand, 12766075 - 12766233
Alignment:
Q  177 aaccaagttgtttggacttcggtagcaaggagcttctttcaaggatgtatctgaagaatacc-ggttcgattctcaggggaaacaacgctcgg-cagtgc 274  Q
    ||||||||||||||||||   || |||||||||| ||| |||||| ||| | |  ||||||| ||||||||||| ||| | ||||| ||| || |||||     
T  12766075 aaccaagttgtttggactcgagtggcaaggagctccttccaaggacgtacccggggaataccgggttcgattctgaggaggaacaatgcttggccagtgt 12766174  T
Q  275 gtatgtctctacgcatgagccggattagtcacccaccagtagtgggtcatagaccggtg 333  Q
    | ||| |||||||||||| || |||||||| ||||||  | |||||||| | |||||||    
T  12766175 gcatgcctctacgcatgaaccagattagtcgcccacctttggtgggtcagaaaccggtg 12766233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 201 - 301
Target Start/End: Original strand, 13664228 - 13664330
Alignment:
Q  201 gcaaggagcttctttcaaggatgtatctgaagaataccgg-ttcgattctcaggggaaacaacgctcggc-agtgcgtatgtctctacgcatgagccgga 298  Q
    |||||||||| ||| |||||| ||||||   ||||||||| ||||||| ||||||| |||||| || ||| |||||| ||| ||||||||||||||| ||    
T  13664228 gcaaggagctccttccaaggacgtatctagggaataccggattcgattatcagggggaacaacacttggccagtgcgcatgcctctacgcatgagccaga 13664327  T
Q  299 tta 301  Q
    |||    
T  13664328 tta 13664330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 239 - 343
Target Start/End: Complemental strand, 25417283 - 25417178
Alignment:
Q  239 ggttcgattctcaggggaaacaacgctcggc-agtgcgtatgtctctacgcatgagccggattagtcacccaccagtagtgggtcatagaccggtgtgca 337  Q
    |||||||||| |||||| ||||||||| ||| |||||| ||| ||||||| | |||||||||||||||   |||| | |||||||| | ||||||| | |    
T  25417283 ggttcgattcccagggggaacaacgcttggccagtgcgcatgcctctacgaacgagccggattagtcatttaccattggtgggtcagaaaccggtgcgaa 25417184  T
Q  338 agaaag 343  Q
    ||||||    
T  25417183 agaaag 25417178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 177 - 304
Target Start/End: Complemental strand, 41163622 - 41163494
Alignment:
Q  177 aaccaagttgtttggacttcggtagcaaggagcttctttcaaggatgtatctgaagaataccgg-ttcgattctcaggggaaacaacgctcggc-agtgc 274  Q
    ||||||||||||||| || | || |||||||||| ||| |||| | ||| | |  ||||||||| |||||||| |||||||| ||||| | ||| |||||    
T  41163622 aaccaagttgtttgggctccagtggcaaggagctccttccaagaacgtacccggggaataccgggttcgattcccaggggaa-caacgtttggccagtgc 41163524  T
Q  275 gtatgtctctacgcatgagccggattagtc 304  Q
      |||||||||||||||||| |||||||||    
T  41163523 acatgtctctacgcatgagctggattagtc 41163494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 181 - 304
Target Start/End: Original strand, 41800925 - 41801050
Alignment:
Q  181 aagttgtttggacttcggtagcaaggagcttctttcaaggatgtatctgaagaataccgg-ttcgattctcaggggaaacaacgctcggc-agtgcgtat 278  Q
    |||||||||||||| | || | |||||  | ||||||| || |||||||  ||||| ||| ||||||||||| ||| ||||||||| | | | |||| ||    
T  41800925 aagttgtttggactcccgtggtaaggaattcctttcaatgacgtatctggggaatatcgggttcgattctcaaggggaacaacgcttgaccaatgcgcat 41801024  T
Q  279 gtctctacgcatgagccggattagtc 304  Q
    ||||||||||| ||||||||||||||    
T  41801025 gtctctacgcacgagccggattagtc 41801050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 223 - 304
Target Start/End: Original strand, 23383647 - 23383730
Alignment:
Q  223 gtatctgaagaataccgg-ttcgattctcaggggaaacaacgctcggc-agtgcgtatgtctctacgcatgagccggattagtc 304  Q
    ||||| || ||||||||| |||||||| |||||| ||||||||| ||| ||||||  || |||||||||||||| |||||||||    
T  23383647 gtatcagaggaataccgggttcgattcccagggggaacaacgcttggccagtgcgcttgcctctacgcatgagctggattagtc 23383730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 172 - 297
Target Start/End: Original strand, 28857067 - 28857194
Alignment:
Q  172 aaaataaccaagttgtttggacttcggtagcaaggagcttctttcaaggatgtatctgaagaataccgg-ttcgattctcaggggaaacaacgctcggc- 269  Q
    |||| |||||||||| |||| || | || |||||||||| ||| |||||| | | | |  ||||||||| |||||||| |||||| |||||| || |||     
T  28857067 aaaaaaaccaagttgcttgggctccagtggcaaggagctccttccaaggacgcacccggggaataccgggttcgattcccagggggaacaacacttggcc 28857166  T
Q  270 agtgcgtatgtctctacgcatgagccgg 297  Q
    |||||| ||| |||||||||||||||||    
T  28857167 agtgcgcatgcctctacgcatgagccgg 28857194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 239 - 304
Target Start/End: Original strand, 12081915 - 12081981
Alignment:
Q  239 ggttcgattctcaggggaaacaacgctcgg-cagtgcgtatgtctctacgcatgagccggattagtc 304  Q
    ||||||||||||||||| ||||||||| || ||||||| |||  |||||||| |||||| |||||||    
T  12081915 ggttcgattctcagggggaacaacgcttggccagtgcgcatgcatctacgcacgagccgaattagtc 12081981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 180 - 265
Target Start/End: Complemental strand, 23247511 - 23247425
Alignment:
Q  180 caagttgtttggacttcggtagcaaggagcttctttcaaggatgtatctgaagaata-ccggttcgattctcaggggaaacaacgct 265  Q
    ||||||||||||||||| |||||||||||||  || |||||| ||| |||  ||||| | |||||||||| |||| | |||||||||    
T  23247511 caagttgtttggacttcagtagcaaggagctcattccaaggacgtacctggggaatatcgggttcgattcccaggaggaacaacgct 23247425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 180 - 304
Target Start/End: Complemental strand, 35813158 - 35813032
Alignment:
Q  180 caagttgtttggacttcggtagcaaggagcttctttcaaggatgtatctgaagaatacc-ggttcgattctcaggggaaacaacgctcg-gcagtgcgta 277  Q
    |||||||||||| || |||| ||||| ||||  || |||||| ||| | || ||||||| ||||||||||  |||||||| || ||| |  ||||||| |    
T  35813158 caagttgtttgggctgcggtggcaagaagctcattccaaggacgtacccgaggaataccgggttcgattcctaggggaaataatgcttgaccagtgcgca 35813059  T
Q  278 tgtctctacgcatgagccggattagtc 304  Q
    ||||||||| |||||| ||||||||||    
T  35813058 tgtctctacacatgagtcggattagtc 35813032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 239 - 304
Target Start/End: Original strand, 37263248 - 37263313
Alignment:
Q  239 ggttcgattctcaggggaaacaacgctcggc-agtgcgtatgtctctacgcatgagccggattagtc 304  Q
    ||||||||||||||||||| ||||||| ||| | |||| ||| ||||||||| ||||||||||||||    
T  37263248 ggttcgattctcaggggaa-caacgcttggccaatgcgcatgcctctacgcacgagccggattagtc 37263313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 201 - 304
Target Start/End: Original strand, 30995089 - 30995194
Alignment:
Q  201 gcaaggagcttctttcaaggatgtatctgaagaatacc-ggttcgattctcaggggaaacaacgctcggc-agtgcgtatgtctctacgcatgagccgga 298  Q
    |||||||||| ||| |||||| |||  ||  ||||||| |||||||||| |||||| |||||| || ||| || ||| ||| ||||||||| ||||||||    
T  30995089 gcaaggagctccttccaaggacgtacatggggaataccaggttcgattcccagggggaacaacacttggccagggcgcatgcctctacgcacgagccgga 30995188  T
Q  299 ttagtc 304  Q
    ||||||    
T  30995189 ttagtc 30995194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 239 - 311
Target Start/End: Original strand, 38369707 - 38369779
Alignment:
Q  239 ggttcgattctcaggggaaacaacgctcgg-cagtgcgtatgtctctacgcatgagccggattagtcacccacc 311  Q
    ||||||||||||||||| |||||| || || ||||||| ||| ||||||||| ||| ||||||||| |||||||    
T  38369707 ggttcgattctcagggg-aacaacacttggccagtgcgcatgcctctacgcacgagtcggattagtaacccacc 38369779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 241 - 301
Target Start/End: Original strand, 40117424 - 40117485
Alignment:
Q  241 ttcgattctcaggggaaacaacgctcggc-agtgcgtatgtctctacgcatgagccggatta 301  Q
    |||||||  |||||| ||||||||| ||| |||||| ||| |||||||||||||||||||||    
T  40117424 ttcgatttccagggggaacaacgcttggccagtgcgcatgcctctacgcatgagccggatta 40117485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 253 - 333
Target Start/End: Complemental strand, 42861304 - 42861223
Alignment:
Q  253 gggaaacaacgctcggc-agtgcgtatgtctctacgcatgagccggattagtcacccaccagtagtgggtcatagaccggtg 333  Q
    |||||||||| || ||| |||||| ||| ||||||||||||||||||||| ||  |||||| | |||||||  |||||||||    
T  42861304 gggaaacaacacttggccagtgcgcatgcctctacgcatgagccggattaatcgtccaccattggtgggtcggagaccggtg 42861223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 50; Significance: 4e-19; HSPs: 16)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 176 - 311
Target Start/End: Original strand, 8932607 - 8932744
Alignment:
Q  176 taaccaagttgtttggacttcggtagcaaggagcttctttcaaggatgtatctgaagaataccgg-ttcgattctcaggggaaacaacgctcggc-agtg 273  Q
    ||||||||||||||| ||| | || |||||||| | ||| |||||||||||| |  ||||| ||| |||||||| |||||| |||||| || ||| ||||    
T  8932607 taaccaagttgtttgaactccagtggcaaggagttccttccaaggatgtatccggggaatatcgggttcgattcccagggggaacaacacttggctagtg 8932706  T
Q  274 cgtatgtctctacgcatgagccggattagtcacccacc 311  Q
    || ||| ||||||||||||||||||||| |||||||||    
T  8932707 cgcatgcctctacgcatgagccggattaatcacccacc 8932744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 176 - 311
Target Start/End: Original strand, 8944073 - 8944210
Alignment:
Q  176 taaccaagttgtttggacttcggtagcaaggagcttctttcaaggatgtatctgaagaataccgg-ttcgattctcaggggaaacaacgctcggc-agtg 273  Q
    ||||||||||||||| ||| | || |||||||| | ||| |||||||||||| |  ||||| ||| |||||||| |||||| |||||| || ||| ||||    
T  8944073 taaccaagttgtttgaactccagtggcaaggagttccttccaaggatgtatccggggaatatcgggttcgattcccagggggaacaacacttggctagtg 8944172  T
Q  274 cgtatgtctctacgcatgagccggattagtcacccacc 311  Q
    || ||| ||||||||||||||||||||| |||||||||    
T  8944173 cgcatgcctctacgcatgagccggattaatcacccacc 8944210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 176 - 304
Target Start/End: Original strand, 21898594 - 21898724
Alignment:
Q  176 taaccaagttgtttggacttcggtagcaaggagcttctttcaaggatgtatctgaagaataccgg-ttcgattctcaggggaaacaacgctcggc-agtg 273  Q
    ||||||||||| |||| || | || |||||||||| ||| |||||| ||||| |  ||||||||| |||||||| |||| | ||||||||| ||| ||||    
T  21898594 taaccaagttgcttgggctccagtggcaaggagctccttccaaggacgtatccggggaataccgggttcgattcccaggaggaacaacgcttggccagtg 21898693  T
Q  274 cgtatgtctctacgcatgagccggattagtc 304  Q
    || ||| ||||||||||||||||||||||||    
T  21898694 cgcatgcctctacgcatgagccggattagtc 21898724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 201 - 322
Target Start/End: Complemental strand, 6606236 - 6606113
Alignment:
Q  201 gcaaggagcttctttcaaggatgtatctgaagaataccgg-ttcgattctcaggggaaacaacgctcggc-agtgcgtatgtctctacgcatgagccgga 298  Q
    |||||||||| ||| |||||| ||||| |  ||||||||| ||||||||||||||| |||||| || ||| ||||   ||| ||||||||||||||||||    
T  6606236 gcaaggagctccttccaaggacgtatccggggaataccgggttcgattctcagggggaacaacacttggccagtgtacatgcctctacgcatgagccgga 6606137  T
Q  299 ttagtcacccaccagtagtgggtc 322  Q
    ||||||  |||||| | |||||||    
T  6606136 ttagtcgtccaccattggtgggtc 6606113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 177 - 304
Target Start/End: Original strand, 19089445 - 19089574
Alignment:
Q  177 aaccaagttgtttggacttcggtagcaaggagcttctttcaaggatgtatctgaagaatacc-ggttcgattctcaggggaaacaacgctcggc-agtgc 274  Q
    |||||||||| |||| || | || ||||||||||  ||||||||| ||||| || ||||||| |||| ||||| |||||| |||||| || ||| ||||     
T  19089445 aaccaagttgcttgggctccagtcgcaaggagctcatttcaaggacgtatccgaggaataccaggtttgattcccagggggaacaacacttggccagtga 19089544  T
Q  275 gtatgtctctacgcatgagccggattagtc 304  Q
    | ||| ||||||||| ||||||||||||||    
T  19089545 gcatgcctctacgcacgagccggattagtc 19089574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 201 - 311
Target Start/End: Complemental strand, 5253362 - 5253250
Alignment:
Q  201 gcaaggagcttctttcaaggatgtatctgaagaataccgg-ttcgattctcaggggaaacaacgctcggc-agtgcgtatgtctctacgcatgagccgga 298  Q
    |||||||||| ||| |||||| ||| | |  ||||||||| |||||||| |||||| |||||| || ||| |||||| ||| ||||||||||||||||||    
T  5253362 gcaaggagctccttccaaggacgtacccggggaataccgggttcgattcccagggggaacaacacttggccagtgcgcatgcctctacgcatgagccgga 5253263  T
Q  299 ttagtcacccacc 311  Q
    ||| || ||||||    
T  5253262 ttaatcgcccacc 5253250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 177 - 322
Target Start/End: Complemental strand, 14107521 - 14107374
Alignment:
Q  177 aaccaagttgtttggacttcggtagcaaggagcttctttcaaggatgtatctgaagaataccgg-ttcgattctcaggggaaacaacgctcggc-agtgc 274  Q
    ||||||||||||||| || | || |||||||||| ||| ||| || ||||  |  ||||||||| |||||||| |||| | ||||||||| | | |||||    
T  14107521 aaccaagttgtttgggctccagtggcaaggagctccttccaaagacgtattcggggaataccgggttcgattcccaggaggaacaacgcttgaccagtgc 14107422  T
Q  275 gtatgtctctacgcatgagccggattagtcacccaccagtagtgggtc 322  Q
      ||| |||||||||||||||||||||||| ||||  | |||||||||    
T  14107421 acatgcctctacgcatgagccggattagtcgcccattattagtgggtc 14107374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 177 - 304
Target Start/End: Complemental strand, 2271464 - 2271337
Alignment:
Q  177 aaccaagttgtttggacttcggtagcaaggagcttctttcaaggatgtatctgaagaataccgg-ttcgattctcaggggaaacaacgctcggc-agtgc 274  Q
    |||||||||| |||| || | || |||||||||| ||| |||||| ||||  |  ||||||||| |||||||||||| |  |||||||||  || |||||    
T  2271464 aaccaagttgcttgggctccagtggcaaggagctccttccaaggacgtattcggggaataccgggttcgattctcagag--aacaacgcttagccagtgc 2271367  T
Q  275 gtatgtctctacgcatgagccggattagtc 304  Q
    | ||||||||||||| ||||||||||||||    
T  2271366 gcatgtctctacgcacgagccggattagtc 2271337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 177 - 333
Target Start/End: Complemental strand, 8612137 - 8611979
Alignment:
Q  177 aaccaagttgtttggacttcggtagcaaggagcttctttcaaggatgtatctgaagaatacc-ggttcgattctcaggggaaacaacgctcg-gcagtgc 274  Q
    |||||||||||||||||| | || |||||||||| ||| |||||| ||| | |  ||||||| ||||||||||  ||| | ||||||||| |  |||||     
T  8612137 aaccaagttgtttggactccagtggcaaggagctccttccaaggacgtacccggggaataccgggttcgattccgaggaggaacaacgcttgaccagtgt 8612038  T
Q  275 gtatgtctctacgcatgagccggattagtcacccaccagtagtgggtcatagaccggtg 333  Q
    | |||  ||||||||||| ||||||||||| ||||||  | |||||||| | |||||||    
T  8612037 gcatgcttctacgcatgaaccggattagtcgcccacctttggtgggtcagaaaccggtg 8611979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 201 - 304
Target Start/End: Complemental strand, 34954758 - 34954653
Alignment:
Q  201 gcaaggagcttctttcaaggatgtatctgaagaatacc-ggttcgattctcaggggaaacaacgctcgg-cagtgcgtatgtctctacgcatgagccgga 298  Q
    |||||||||| ||| |||||| ||| |||  ||||||| ||||||||||||||||| ||||||| | || ||||||  ||  ||||||||||||||| ||    
T  34954758 gcaaggagctccttccaaggacgtacctggggaataccaggttcgattctcagggggaacaacgtttggccagtgcacatacctctacgcatgagccaga 34954659  T
Q  299 ttagtc 304  Q
    ||||||    
T  34954658 ttagtc 34954653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 239 - 310
Target Start/End: Original strand, 12635824 - 12635896
Alignment:
Q  239 ggttcgattctcaggggaaacaacgctcggc-agtgcgtatgtctctacgcatgagccggattagtcacccac 310  Q
    |||| ||||| |||||||||||||||| ||| |||||| ||| |||||||||  ||||||||||||| |||||    
T  12635824 ggtttgattcccaggggaaacaacgcttggctagtgcgcatgcctctacgcacaagccggattagtcgcccac 12635896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 177 - 322
Target Start/End: Complemental strand, 10311632 - 10311485
Alignment:
Q  177 aaccaagttgtttggacttcggtagcaaggagcttctttcaaggatgtatctgaagaataccgg-ttcgattctcaggggaaacaacgctcggc-agtgc 274  Q
    ||||| |||| |||| || | ||||||||||||| ||| |||| | ||||| |  ||||||||| |||||| |||| ||| ||||||||| ||| |||||    
T  10311632 aaccatgttgcttgggctccagtagcaaggagctccttccaagaacgtatccggggaataccgggttcgatcctcaaggggaacaacgcttggccagtgc 10311533  T
Q  275 gtatgtctctacgcatgagccggattagtcacccaccagtagtgggtc 322  Q
    | ||||||||||||| |||   |||||||| | ||||| | |||||||    
T  10311532 gcatgtctctacgcacgagttagattagtcgctcaccattggtgggtc 10311485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 176 - 321
Target Start/End: Original strand, 13468879 - 13469026
Alignment:
Q  176 taaccaagttgtttggacttcggtagcaaggagcttctttcaaggatgtatctgaagaatacc-ggttcgattctcaggggaaacaacgctcgg-cagtg 273  Q
    ||||||||||| |||| ||  ||| |||||||||| ||| |||||| ||||| |  ||||||| ||||| ||||  ||||| ||||||| | || |||||    
T  13468879 taaccaagttgcttgggctctggtggcaaggagctccttccaaggacgtatccggggaataccaggttcaattcctagggggaacaacgattggtcagtg 13468978  T
Q  274 cgtatgtctctacgcatgagccggattagtcacccaccagtagtgggt 321  Q
    |  ||| ||||||||| ||||| |||||||| ||||||| | ||||||    
T  13468979 cacatgcctctacgcacgagccagattagtcgcccaccattggtgggt 13469026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 232 - 304
Target Start/End: Original strand, 3601086 - 3601160
Alignment:
Q  232 gaataccggtt-cgattctcaggggaaacaacgctcgg-cagtgcgtatgtctctacgcatgagccggattagtc 304  Q
    ||||||||||| ||||||||||||| ||||||||| || ||||||| ||| || ||| || ||||||||||||||    
T  3601086 gaataccggtttcgattctcagggggaacaacgcttggccagtgcgcatgcctatacacacgagccggattagtc 3601160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 239 - 304
Target Start/End: Complemental strand, 13036104 - 13036038
Alignment:
Q  239 ggttcgattctcaggggaaacaacgctcggc-agtgcgtatgtctctacgcatgagccggattagtc 304  Q
    ||||||||| ||||||| |||||| || ||| |||||| ||| ||||||||||||||| ||||||||    
T  13036104 ggttcgattttcagggggaacaacacttggccagtgcgcatgcctctacgcatgagccagattagtc 13036038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 251 - 303
Target Start/End: Complemental strand, 29444853 - 29444800
Alignment:
Q  251 aggggaaacaacgctcggc-agtgcgtatgtctctacgcatgagccggattagt 303  Q
    ||||| ||||||||| ||| |||||| ||| |||||||||||||||||||||||    
T  29444853 agggggaacaacgcttggccagtgcgcatgcctctacgcatgagccggattagt 29444800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 50; Significance: 4e-19; HSPs: 34)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 176 - 304
Target Start/End: Complemental strand, 10046640 - 10046511
Alignment:
Q  176 taaccaagttgtttggacttcggtagcaaggagcttctttcaaggatgtatctgaagaataccgg-ttcgattctcaggggaaacaacgctcggcagtgc 274  Q
    ||||||||||| |||| || |  | |||||||||| ||| |||| | ||||| | |||||||||| ||||||||||| ||||||||||| | | ||||||    
T  10046640 taaccaagttgcttgggctccaatggcaaggagctccttccaagaacgtatccggagaataccgggttcgattctcaagggaaacaacgtttgacagtgc 10046541  T
Q  275 gtatgtctctacgcatgagccggattagtc 304  Q
    | ||| ||||||||||||||||||||||||    
T  10046540 gcatgcctctacgcatgagccggattagtc 10046511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 177 - 304
Target Start/End: Original strand, 38962706 - 38962835
Alignment:
Q  177 aaccaagttgtttggacttcggtagcaaggagcttctttcaaggatgtatctgaagaatacc-ggttcgattctcaggggaaacaacgctcgg-cagtgc 274  Q
    |||||||||||||||||| | || | ||||||||  ||||||||| ||||| |  ||||||| ||||||||| ||||| | ||||||||| || ||||||    
T  38962706 aaccaagttgtttggactccagtggtaaggagctcatttcaaggacgtatccggggaataccgggttcgattttcaggaggaacaacgcttggccagtgc 38962805  T
Q  275 gtatgtctctacgcatgagccggattagtc 304  Q
    | ||| |||||||||||| |||||||||||    
T  38962806 gcatgcctctacgcatgaaccggattagtc 38962835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 174 - 310
Target Start/End: Original strand, 2550808 - 2550946
Alignment:
Q  174 aataaccaagttgtttggacttcggtagcaaggagcttctttcaaggatgtatctgaagaataccgg-ttcgattctcaggggaaacaacgctcggc-ag 271  Q
    ||||||||||||| |||| || | || |||||||||| ||| |||||| ||||| |  ||||| ||| |||||||| |||| | |||||| ||  || ||    
T  2550808 aataaccaagttgcttgggctccagtggcaaggagctccttacaaggacgtatccggggaatatcgggttcgattcccaggaggaacaacacttagccag 2550907  T
Q  272 tgcgtatgtctctacgcatgagccggattagtcacccac 310  Q
    |||| |||||||||||||||||||||||||||| |||||    
T  2550908 tgcgcatgtctctacgcatgagccggattagtcgcccac 2550946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 175 - 311
Target Start/End: Original strand, 38005343 - 38005481
Alignment:
Q  175 ataaccaagttgtttggacttcggtagcaaggagcttctttcaaggatgtatctgaagaataccgg-ttcgattctcaggggaaacaacgctcggc-agt 272  Q
    ||||||||||||||||| || | || |||||||||| ||| |||||| ||| | |  |||||| || |||||||| || ||| ||||||||| ||| |||    
T  38005343 ataaccaagttgtttgggctccagtggcaaggagctccttccaaggacgtacccggggaatactgggttcgattcccaaggggaacaacgcttggccagt 38005442  T
Q  273 gcgtatgtctctacgcatgagccggattagtcacccacc 311  Q
    ||| ||| |||||| ||||||||||||||||| ||||||    
T  38005443 gcgcatgcctctacacatgagccggattagtcgcccacc 38005481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 213 - 304
Target Start/End: Complemental strand, 3849041 - 3848948
Alignment:
Q  213 tttcaaggatgtatctgaagaataccgg-ttcgattctcaggggaaacaacgctcgg-cagtgcgtatgtctctacgcatgagccggattagtc 304  Q
    ||||||||| ||||||| |||||||||| ||||||| ||||||||||||||| | || ||| ||| ||||||||||||| ||| ||||||||||    
T  3849041 tttcaaggacgtatctggagaataccgggttcgattatcaggggaaacaacgtttggccagggcgcatgtctctacgcacgagtcggattagtc 3848948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 176 - 310
Target Start/End: Original strand, 8410073 - 8410209
Alignment:
Q  176 taaccaagttgtttggacttcggtagcaaggagcttctttcaaggatgtatctgaagaataccgg-ttcgattctcaggggaaacaacgctcggc-agtg 273  Q
    ||||||||||| |||| || | || |||||||||| ||| |||||| ||| | | |||||| ||| |||||||| |||||| |||||| || ||| ||||    
T  8410073 taaccaagttgcttgggctccagtggcaaggagctccttccaaggacgtacccggagaatatcgggttcgattcccagggggaacaacacttggccagtg 8410172  T
Q  274 cgtatgtctctacgcatgagccggattagtcacccac 310  Q
    || ||| ||||||||| |||||||||||||| |||||    
T  8410173 cgcatgcctctacgcacgagccggattagtcgcccac 8410209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 175 - 301
Target Start/End: Original strand, 34356147 - 34356275
Alignment:
Q  175 ataaccaagttgtttggacttcggtagcaaggagcttctttcaaggatgtatctgaagaatacc-ggttcgattctcaggggaaacaacgctcgg-cagt 272  Q
    ||||||||||||||||| || | || ||||||||||  || |||||| |||||||  ||||||| |||||||||  |||||| |||||| || || ||||    
T  34356147 ataaccaagttgtttgggctccagtggcaaggagctatttccaaggacgtatctggggaataccgggttcgatttccagggggaacaacacttggtcagt 34356246  T
Q  273 gcgtatgtctctacgcatgagccggatta 301  Q
    ||| ||| ||||| |||||||||||||||    
T  34356247 gcgcatgcctctatgcatgagccggatta 34356275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 178 - 304
Target Start/End: Original strand, 41187793 - 41187921
Alignment:
Q  178 accaagttgtttggacttcggtagcaaggagcttctttcaaggatgtatctgaagaataccgg-ttcgattctcaggggaaacaacgctcggc-agtgcg 275  Q
    |||||||||| ||| ||||||| |||||||||| ||| |||||| ||||| || ||||||||  ||| ||||| |||  |||||||||| | | ||||||    
T  41187793 accaagttgtctgggcttcggtggcaaggagctccttccaaggacgtatccgaggaataccgaattcaattcttaggaaaaacaacgcttgaccagtgcg 41187892  T
Q  276 tatgtctctacgcatgagccggattagtc 304  Q
     ||| ||||||||||||| ||||||||||    
T  41187893 catgcctctacgcatgagacggattagtc 41187921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 216 - 322
Target Start/End: Original strand, 44139466 - 44139574
Alignment:
Q  216 caaggatgtatctgaagaataccgg-ttcgattctcaggggaaacaacgctcggc-agtgcgtatgtctctacgcatgagccggattagtcacccaccag 313  Q
    |||||||| |||||  ||||||||| |||||||| |||||| ||||||||| ||| ||||||  || ||||||||| |||||||||||||| |||||||     
T  44139466 caaggatgcatctggggaataccgggttcgattcccagggggaacaacgcttggccagtgcgcgtgcctctacgcacgagccggattagtcgcccaccaa 44139565  T
Q  314 tagtgggtc 322  Q
    | |||||||    
T  44139566 tggtgggtc 44139574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 176 - 304
Target Start/End: Complemental strand, 10026780 - 10026650
Alignment:
Q  176 taaccaagttgtttggacttcggtagcaaggagcttctttcaaggatgta-tctgaagaataccgg-ttcgattctcaggggaaacaacgctcggc-agt 272  Q
    ||||||||||| |||| || |  | |||||||||| ||| |||||| ||| || ||| |||||||| ||||||||||||||| ||||||| | ||| |||    
T  10026780 taaccaagttgcttgggctccaatggcaaggagctccttccaaggacgtactcggaa-aataccgggttcgattctcagggggaacaacgtttggccagt 10026682  T
Q  273 gcgtatgtctctacgcatgagccggattagtc 304  Q
    ||| ||| ||||||||||||||||||||||||    
T  10026681 gcgcatgcctctacgcatgagccggattagtc 10026650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 172 - 301
Target Start/End: Complemental strand, 42770819 - 42770688
Alignment:
Q  172 aaaataaccaagttgtttggacttcggtagcaaggagcttctttcaaggatgtatctgaagaatacc-ggttcgattctcaggggaaacaacgctcgg-c 269  Q
    ||||||||||||||| |||| || | || |||| ||||| ||| |||||| ||||| ||  |||||| ||||| ||||||||||| ||||||||| || |    
T  42770819 aaaataaccaagttgcttgggctccagtggcaaagagctccttccaaggacgtatccgagaaataccgggttcaattctcagggggaacaacgcttggcc 42770720  T
Q  270 agtgcgtatgtctctacgcatgagccggatta 301  Q
    |||||| ||| |||| |||| |||||||||||    
T  42770719 agtgcgcatgcctcttcgcacgagccggatta 42770688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 175 - 289
Target Start/End: Complemental strand, 2149360 - 2149243
Alignment:
Q  175 ataaccaagttgtttggacttcggtagcaaggagcttctttcaaggatgtatctgaagaataccg--gttcgattctcaggggaaacaacgctcgg-cag 271  Q
    ||||||||||||||||| || | || ||||||| |||||||||||||||||||||  ||||||||  ||||||||| | |||| || |||| | || |||    
T  2149360 ataaccaagttgtttgggctccagtggcaaggaacttctttcaaggatgtatctggggaataccggagttcgattcactgggggaataacgtttggccag 2149261  T
Q  272 tgcgtatgtctctacgca 289  Q
    |||| ||| |||||||||    
T  2149260 tgcgcatgcctctacgca 2149243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 176 - 304
Target Start/End: Complemental strand, 21180478 - 21180348
Alignment:
Q  176 taaccaagttgtttggacttcggtagcaaggagcttctttcaaggatgtatctgaagaataccgg-ttcgattctcaggggaaacaacgctcgg-cagtg 273  Q
    |||||||||||||||| || | || |||||||||| ||| |||||| ||| | |||||||||||| |||||||| || ||  |||||| || || |||||    
T  21180478 taaccaagttgtttgggctccagtggcaaggagctccttccaaggacgtacccgaagaataccggattcgattcccatggagaacaacacttggccagtg 21180379  T
Q  274 cgtatgtctctacgcatgagccggattagtc 304  Q
    |  ||| ||||||||| ||||||||||||||    
T  21180378 cacatgcctctacgcacgagccggattagtc 21180348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 175 - 304
Target Start/End: Original strand, 22593076 - 22593206
Alignment:
Q  175 ataaccaagttgtttggacttcggtagcaaggagcttctttcaaggatgtatctgaagaataccg-gttcgattctcaggggaaacaacgctcggcagtg 273  Q
    |||||||||||| |||  || | || |||||||||| ||| |||||| ||| | |  |||||| | ||||||||| |||||| ||||||| | | |||||    
T  22593076 ataaccaagttgcttgtgctccagtggcaaggagctccttccaaggacgtacccggggaatactgagttcgattcccagggggaacaacgttggccagtg 22593175  T
Q  274 cgtatgtctctacgcatgagccggattagtc 304  Q
    || ||| ||||||||||||||||||||||||    
T  22593176 cgcatgcctctacgcatgagccggattagtc 22593206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 202 - 311
Target Start/End: Original strand, 34722649 - 34722759
Alignment:
Q  202 caaggagcttctttcaaggatgtatctgaagaataccggttcgattctcaggggaaacaacgctcgg-cagtgcgtatgtctctacgcatgagccggatt 300  Q
    ||||||||| ||| |||||| ||| |  | |||||  ||||||||||||||||  ||||||||| || ||||||  ||||||||||||| ||||||||||    
T  34722649 caaggagctccttccaaggacgtaccaaatgaatatgggttcgattctcagggagaacaacgcttggtcagtgcacatgtctctacgcacgagccggatt 34722748  T
Q  301 agtcacccacc 311  Q
    |||| ||||||    
T  34722749 agtcgcccacc 34722759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 176 - 304
Target Start/End: Complemental strand, 14853531 - 14853399
Alignment:
Q  176 taaccaagttgtttggacttcggtagcaaggagcttctttcaaggatgtatctgaagaatacc-ggttcgattctcaggggaaacaacgctcgg-cagtg 273  Q
    |||||||||||||||| || | || ||||||| || |||||||||||||||| |  ||||||| | ||||||| ||||||| ||||||  | || |||||    
T  14853531 taaccaagttgtttgggctccagtggcaaggaactcctttcaaggatgtatccggggaataccagattcgattttcagggggaacaacttttggccagtg 14853432  T
Q  274 cgtatg--tctctacgcatgagccggattagtc 304  Q
    ||||||  ||||||| |||||| ||||||||||    
T  14853431 cgtatgcctctctactcatgagtcggattagtc 14853399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 232 - 304
Target Start/End: Original strand, 24179568 - 24179640
Alignment:
Q  232 gaataccggttcgattctcaggggaaacaacgctcgg-cagtgcgtatgtctctacgcatgagccggattagtc 304  Q
    |||||||||||||||||||||||| ||||||| | || ||||||  ||| ||||||||||||||||||||||||    
T  24179568 gaataccggttcgattctcagggg-aacaacgtttggccagtgcacatgcctctacgcatgagccggattagtc 24179640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 180 - 306
Target Start/End: Original strand, 21286390 - 21286518
Alignment:
Q  180 caagttgtttggacttcggtagcaaggagcttctttcaaggatgtatctgaagaataccgg-ttcgattctcaggggaaacaacgctcggc-agtgcgta 277  Q
    |||||||||||  || | || |||||||||| ||| |||||| ||||| |  ||||||||| |||||||| |||| ||||||||||| | | |||||| |    
T  21286390 caagttgtttgagctccagtggcaaggagctccttccaaggacgtatccggggaataccgggttcgattcccaggcgaaacaacgcttgaccagtgcgca 21286489  T
Q  278 tgtctctacgcatgagccggattagtcac 306  Q
    || ||||||||| |||| |||||||||||    
T  21286490 tgcctctacgcacgagctggattagtcac 21286518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 180 - 301
Target Start/End: Complemental strand, 45263827 - 45263704
Alignment:
Q  180 caagttgtttggacttcggtagcaaggagcttctttcaaggatgtatctgaagaataccgg-ttcgattctcaggggaaacaacgctcggc-agtgcgta 277  Q
    |||||||||||| || | || |||||||||| |||||||  || |||| |  ||||||||| |||||||| ||| || ||||||||| ||| |||||| |    
T  45263827 caagttgtttgggctccagtggcaaggagctcctttcaaaaatttatccggggaataccgggttcgattcccagagggaacaacgcttggccagtgcgca 45263728  T
Q  278 tgtctctacgcatgagccggatta 301  Q
    || ||||||||| |||||||||||    
T  45263727 tgcctctacgcacgagccggatta 45263704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 175 - 311
Target Start/End: Original strand, 331442 - 331580
Alignment:
Q  175 ataaccaagttgtttggacttcggtagcaaggagcttctttcaaggatgtatctgaagaataccgg-ttcgattctcaggggaaacaacgctcggc-agt 272  Q
    |||||||||||| |||| || | || |||| |||||  || |||||| ||| | |  ||||||||| |||||||| |||||| |||||| || ||| |||    
T  331442 ataaccaagttgcttgggctccagtggcaatgagctctttccaaggacgtacccggggaataccgggttcgattcccagggggaacaacacttggccagt 331541  T
Q  273 gcgtatgtctctacgcatgagccggattagtcacccacc 311  Q
    ||| |||  ||||||||||||||||||||||| ||||||    
T  331542 gcgcatgcttctacgcatgagccggattagtcgcccacc 331580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 241 - 342
Target Start/End: Complemental strand, 6358249 - 6358147
Alignment:
Q  241 ttcgattctcaggggaaacaacgctcggc-agtgcgtatgtctctacgcatgagccggattagtcacccaccagtagtgggtcatagaccggtgtgcaag 339  Q
    |||||||  |||||| |||||| || ||| |||||| ||| ||||||||||||||||||||||||  |||||| | |||||||  | ||||||||| |||    
T  6358249 ttcgatttccagggggaacaacacttggccagtgcgcatgcctctacgcatgagccggattagtcgtccaccattggtgggtcgaaaaccggtgtgaaag 6358150  T
Q  340 aaa 342  Q
    |||    
T  6358149 aaa 6358147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 176 - 304
Target Start/End: Original strand, 7747216 - 7747346
Alignment:
Q  176 taaccaagttgtttggacttcggtagcaaggagcttctttcaaggatgtatctgaagaataccgg-ttcgattctcaggggaaacaacgctcggc-agtg 273  Q
    ||||||||||| |||| || | || |||||||||| ||| |||||| ||||| |  ||||||||| ||||||||  ||| | ||||||| | ||| ||||    
T  7747216 taaccaagttgcttgggctccagtggcaaggagctccttccaaggacgtatccggggaataccgggttcgattcctaggaggaacaacgtttggccagtg 7747315  T
Q  274 cgtatgtctctacgcatgagccggattagtc 304  Q
     | ||| ||||||||||||||||||||||||    
T  7747316 tgcatgcctctacgcatgagccggattagtc 7747346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 239 - 304
Target Start/End: Complemental strand, 14169709 - 14169643
Alignment:
Q  239 ggttcgattctcaggggaaacaacgctcggc-agtgcgtatgtctctacgcatgagccggattagtc 304  Q
    |||||||||||| |||| |||||| || | | |||||| ||||||||||||||||||||||||||||    
T  14169709 ggttcgattctccgggggaacaacacttgaccagtgcgcatgtctctacgcatgagccggattagtc 14169643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 201 - 304
Target Start/End: Complemental strand, 25540543 - 25540438
Alignment:
Q  201 gcaaggagcttctttcaaggatgtatctgaagaataccgg-ttcgattctcaggggaaacaacgctcggc-agtgcgtatgtctctacgcatgagccgga 298  Q
    ||||||||||  || |||||| |||||||  |||||| || ||||||||  ||||| ||||||||| ||| |||||| ||| ||||||||| ||||||||    
T  25540543 gcaaggagctcattccaaggacgtatctggggaatactgggttcgattcctagggggaacaacgcttggccagtgcgcatgcctctacgcacgagccgga 25540444  T
Q  299 ttagtc 304  Q
    ||||||    
T  25540443 ttagtc 25540438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 239 - 311
Target Start/End: Complemental strand, 41032006 - 41031933
Alignment:
Q  239 ggttcgattctcaggggaaacaacgctcggc-agtgcgtatgtctctacgcatgagccggattagtcacccacc 311  Q
    |||||||||| |||||| |||||| || ||| |||| | ||| ||||||||| |||||||||||||||||||||    
T  41032006 ggttcgattcccagggggaacaacacttggccagtgtgcatgcctctacgcacgagccggattagtcacccacc 41031933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 201 - 304
Target Start/End: Original strand, 41220602 - 41220707
Alignment:
Q  201 gcaaggagcttctttcaaggatgtatctgaagaataccgg-ttcgattctcaggggaaacaacgctcggc-agtgcgtatgtctctacgcatgagccgga 298  Q
    |||||||||| ||| |||||| ||| | |  ||||||||| |||||||| |||| | ||||||||| ||| |||||| ||| |||||||||||||||| |    
T  41220602 gcaaggagctccttccaaggacgtacccggggaataccgggttcgattcccaggaggaacaacgcttggccagtgcgcatgcctctacgcatgagccgaa 41220701  T
Q  299 ttagtc 304  Q
    ||||||    
T  41220702 ttagtc 41220707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 239 - 322
Target Start/End: Original strand, 12455316 - 12455400
Alignment:
Q  239 ggttcgattctcaggggaaacaacgctcggc-agtgcgtatgtctctacgcatgagccggattagtcacccaccagtagtgggtc 322  Q
    |||||||||  ||||||||||||||||  || |||||| ||| ||||||||| |||||||||||||| | ||||| | |||||||    
T  12455316 ggttcgatttccaggggaaacaacgcttagccagtgcgcatgcctctacgcacgagccggattagtcgctcaccattggtgggtc 12455400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 175 - 322
Target Start/End: Complemental strand, 20612701 - 20612550
Alignment:
Q  175 ataaccaagttgtttggacttcggtagcaaggagcttctttcaaggatgtatctgaagaatacc-ggttcgattctcagg-ggaaacaacgctcgg-cag 271  Q
    |||||||||||| |||| || | || |||||||||| ||| ||||| |||||  |  ||||||| ||||||||||||||| || |||||| || || |||    
T  20612701 ataaccaagttgcttgggctccagtggcaaggagctccttccaaggttgtattcggggaataccgggttcgattctcaggagggaacaacacttggccag 20612602  T
Q  272 tgcgtatgtctctacgcatgagcc-ggattagtcacccaccagtagtgggtc 322  Q
    |||| ||| ||||| ||||||||| |||||||||  |||||| | |||||||    
T  20612601 tgcgcatgcctctatgcatgagccgggattagtcgtccaccattggtgggtc 20612550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 180 - 301
Target Start/End: Original strand, 37560119 - 37560242
Alignment:
Q  180 caagttgtttggacttcggtagcaaggagcttctttcaaggatgtatctgaagaatacc-ggttcgattctcaggggaaacaacgctcgg-cagtgcgta 277  Q
    |||||||||||| || | || | ||| |||| ||| |||||| ||| | || ||||||| ||||||||||||| ||| ||||||| | || ||||||| |    
T  37560119 caagttgtttgggctccagtggtaagaagctccttccaaggacgtacccgaggaataccaggttcgattctcaaggggaacaacgtttggtcagtgcgca 37560218  T
Q  278 tgtctctacgcatgagccggatta 301  Q
    || ||||||||| |||||||||||    
T  37560219 tgcctctacgcacgagccggatta 37560242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 203 - 311
Target Start/End: Original strand, 10823029 - 10823139
Alignment:
Q  203 aaggagcttctttcaaggatgtatctgaagaataccgg-ttcgattctcaggggaaacaacgctcggc-agtgcgtatgtctctacgcatgagccggatt 300  Q
    |||||||| ||| |||||| ||| | |  ||||||||| || ||||| |||| | ||||||||| ||| |||||| ||| ||||||||| ||||||||||    
T  10823029 aaggagctccttccaaggacgtacccggggaataccgggtttgattcccaggaggaacaacgcttggccagtgcgcatgcctctacgcacgagccggatt 10823128  T
Q  301 agtcacccacc 311  Q
    |||| ||||||    
T  10823129 agtcgcccacc 10823139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 269 - 310
Target Start/End: Complemental strand, 13026480 - 13026439
Alignment:
Q  269 cagtgcgtatgtctctacgcatgagccggattagtcacccac 310  Q
    ||||||| ||| ||||||||||||||||||||||||| ||||    
T  13026480 cagtgcgcatgcctctacgcatgagccggattagtcagccac 13026439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 176 - 311
Target Start/End: Complemental strand, 19976971 - 19976834
Alignment:
Q  176 taaccaagttgtttggacttcggtagcaaggagcttctttcaaggatgtatctgaagaataccgg-ttcgattctcaggggaaacaacgctcgg-cagtg 273  Q
    ||||||| |||||||| || | || ||||| ||||  || |||||| ||||| |  ||||||||| ||||||| ||||||| || |||| | || |||||    
T  19976971 taaccaaattgtttgggctccagtggcaagtagctctttccaaggacgtatccggggaataccgggttcgattttcagggggaataacgtttggtcagtg 19976872  T
Q  274 cgtatgtctctacgcatgagccggattagtcacccacc 311  Q
    || |||||||||||||| || || ||||||| ||||||    
T  19976871 cgcatgtctctacgcataagtcgaattagtcgcccacc 19976834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 201 - 304
Target Start/End: Complemental strand, 39201647 - 39201542
Alignment:
Q  201 gcaaggagcttctttcaaggatgtatctgaagaataccgg-ttcgattctcaggggaaacaacgctcggc-agtgcgtatgtctctacgcatgagccgga 298  Q
    |||||||||| ||| |||||| |||   || ||||||||  ||||||||||||||| ||||| | | ||| |||| | ||| ||||||||||||||||||    
T  39201647 gcaaggagctccttccaaggacgtactcgaggaataccgaattcgattctcagggggaacaatgtttggccagtgtgcatgcctctacgcatgagccgga 39201548  T
Q  299 ttagtc 304  Q
    ||||||    
T  39201547 ttagtc 39201542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 198 - 262
Target Start/End: Original strand, 41187673 - 41187738
Alignment:
Q  198 gtagcaaggagcttctttcaaggatgtatctgaagaatacc-ggttcgattctcaggggaaacaac 262  Q
    ||||||||||||| |||  ||||| |||||||||||||||| ||||||||| | ||||| ||||||    
T  41187673 gtagcaaggagctccttctaaggacgtatctgaagaataccgggttcgattatgagggggaacaac 41187738  T

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Target: chr1 (Bit Score: 48; Significance: 6e-18; HSPs: 34)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 176 - 321
Target Start/End: Original strand, 18915810 - 18915957
Alignment:
Q  176 taaccaagttgtttggacttcggtagcaaggagcttctttcaaggatgtatctgaagaatacc-ggttcgattctcaggggaaacaacgctcgg-cagtg 273  Q
    |||||||||||||||| |||| || |||||||||||||| |||||| ||| | |  ||||||| |||||||||| |||||| |||||| || || |||||    
T  18915810 taaccaagttgtttgggcttcagtggcaaggagcttcttccaaggacgtacccggggaataccgggttcgattcccagggggaacaacacttggccagtg 18915909  T
Q  274 cgtatgtctctacgcatgagccggattagtcacccaccagtagtgggt 321  Q
     | ||| ||||||||| |||||||||||||| | ||||| | ||||||    
T  18915910 tgcatgcctctacgcacgagccggattagtcgctcaccattggtgggt 18915957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 177 - 304
Target Start/End: Original strand, 49078058 - 49078187
Alignment:
Q  177 aaccaagttgtttggacttcggtagcaaggagcttctttcaaggatgtatctgaagaataccgg-ttcgattctcaggggaaacaacgctcggc-agtgc 274  Q
    |||||||||| |||| || | || |||||||||| |||  ||||| ||||| |  ||||||||| |||||||| ||||||||||||| || ||| |||||    
T  49078058 aaccaagttgcttgggctccagtggcaaggagctccttctaaggacgtatccggggaataccgggttcgattcccaggggaaacaacacttggccagtgc 49078157  T
Q  275 gtatgtctctacgcatgagccggattagtc 304  Q
    | ||| ||||||||||||||||||||||||    
T  49078158 gcatgcctctacgcatgagccggattagtc 49078187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 201 - 322
Target Start/End: Original strand, 26325780 - 26325903
Alignment:
Q  201 gcaaggagcttctttcaaggatgtatctgaagaataccgg-ttcgattctcaggggaaacaacgctcgg-cagtgcgtatgtctctacgcatgagccgga 298  Q
    |||||||||| |||||||||| ||||| || ||||| ||| |||||||| ||| || |||||| || || ||||||| ||| ||||||||||||||||||    
T  26325780 gcaaggagctcctttcaaggacgtatccgaggaatatcgggttcgattcccagcgggaacaacacttggtcagtgcgcatgcctctacgcatgagccgga 26325879  T
Q  299 ttagtcacccaccagtagtgggtc 322  Q
    ||||||  |||||| | |||||||    
T  26325880 ttagtcgtccaccattggtgggtc 26325903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 176 - 304
Target Start/End: Original strand, 5855465 - 5855595
Alignment:
Q  176 taaccaagttgtttggacttcggtagcaaggagcttctttcaaggatgtatctgaagaataccgg-ttcgattctcaggggaaacaacgctcggc-agtg 273  Q
    |||||||||||||||| || | || |||||||||| ||| |||||| ||||  |  ||||||||| |||||||| |||| | ||||||||| ||| ||||    
T  5855465 taaccaagttgtttgggctccagtggcaaggagctccttccaaggacgtattcggggaataccgggttcgattcccaggaggaacaacgcttggccagtg 5855564  T
Q  274 cgtatgtctctacgcatgagccggattagtc 304  Q
    || ||| ||||||||||||| ||||||||||    
T  5855565 cgcatgcctctacgcatgaggcggattagtc 5855595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 178 - 322
Target Start/End: Complemental strand, 41664019 - 41663873
Alignment:
Q  178 accaagttgtttggacttcggtagcaaggagcttctttcaaggatgtatctgaagaataccgg-ttcgattctcaggggaaacaacgctcgg-cagtgcg 275  Q
    |||||||||||||| || | || |||||||||| |||  ||||| ||||| |  ||||||||| |||||||| |||||| |||||| || || |||||||    
T  41664019 accaagttgtttgggctccagtggcaaggagctccttctaaggacgtatccggggaataccgggttcgattcccagggggaacaacacttggtcagtgcg 41663920  T
Q  276 tatgtctctacgcatgagccggattagtcacccaccagtagtgggtc 322  Q
     ||| |||||||||||||| |||||||||  |||||| | |||||||    
T  41663919 catgcctctacgcatgagctggattagtcgtccaccattggtgggtc 41663873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 177 - 304
Target Start/End: Complemental strand, 11398052 - 11397924
Alignment:
Q  177 aaccaagttgtttggacttcggtagcaaggagcttctttcaaggatgtatctgaagaatacc-ggttcgattctcaggggaaacaacgctcgg-cagtgc 274  Q
    |||||||||| |||| || | || |||||||||| ||| |||||||||||| | |||||||| ||||||||||  ||||| ||||||| | || || |||    
T  11398052 aaccaagttgcttgggctccagtggcaaggagctccttccaaggatgtatccggagaataccgggttcgattccgagggg-aacaacgtttggccaatgc 11397954  T
Q  275 gtatgtctctacgcatgagccggattagtc 304  Q
    ||||| ||||||||||||| ||||||||||    
T  11397953 gtatgcctctacgcatgagtcggattagtc 11397924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 201 - 304
Target Start/End: Complemental strand, 33498979 - 33498874
Alignment:
Q  201 gcaaggagcttctttcaaggatgtatctgaagaataccgg-ttcgattctcaggggaaacaacgctcggc-agtgcgtatgtctctacgcatgagccgga 298  Q
    |||||||| | |||| ||||||||| ||| | |||||||| ||||||||||||| | | ||||||| ||| |||||| ||| ||||||||||||||||||    
T  33498979 gcaaggagttccttttaaggatgtacctggaaaataccgggttcgattctcaggaggagcaacgcttggccagtgcgcatgcctctacgcatgagccgga 33498880  T
Q  299 ttagtc 304  Q
    ||||||    
T  33498879 ttagtc 33498874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 204 - 322
Target Start/End: Complemental strand, 33004152 - 33004032
Alignment:
Q  204 aggagcttctttcaaggatgtatctgaagaataccgg-ttcgattctcaggggaaacaacgctcggc-agtgcgtatgtctctacgcatgagccggatta 301  Q
    ||||||| ||| |||||| ||||| |  ||||| ||| |||||||  |||||||||||| ||| ||| |||||| ||| ||||||||| |||||||||||    
T  33004152 aggagctccttccaaggacgtatccggggaatatcggattcgatttccaggggaaacaatgcttggccagtgcgcatgcctctacgcacgagccggatta 33004053  T
Q  302 gtcacccaccagtagtgggtc 322  Q
    ||||||||||| | |||||||    
T  33004052 gtcacccaccaatggtgggtc 33004032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 174 - 312
Target Start/End: Complemental strand, 48798237 - 48798097
Alignment:
Q  174 aataaccaagttgtttggacttcggtagcaaggagcttctttcaaggatgtatctgaagaataccgg-ttcgattctcaggggaaacaacgctcggc-ag 271  Q
    ||||||||||||||| || || | || |||||||||| ||| ||| || ||||| |  ||||| ||| |||||||  |||||| ||||||||| | | ||    
T  48798237 aataaccaagttgttggggctccagtggcaaggagctccttccaatgacgtatccggggaatatcgggttcgatttccagggggaacaacgcttgactag 48798138  T
Q  272 tgcgtatgtctctacgcatgagccggattagtcacccacca 312  Q
    |||| ||| ||||||||||||||||||||||||||| ||||    
T  48798137 tgcgcatgcctctacgcatgagccggattagtcacctacca 48798097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 177 - 310
Target Start/End: Original strand, 34697279 - 34697414
Alignment:
Q  177 aaccaagttgtttggacttcggtagcaaggagcttctttcaaggatgtatctgaagaatacc-ggttcgattctcaggggaaacaacgctcggc-agtgc 274  Q
    |||||||||| |||||||| ||| |||||||||| ||| |||  | ||||  |  ||||||| ||||||||||| ||||| |||||| || ||| ||||     
T  34697279 aaccaagttgcttggactttggtggcaaggagctccttccaaaaacgtattcggggaataccaggttcgattcttagggggaacaacacttggctagtgt 34697378  T
Q  275 gtatgtctctacgcatgagccggattagtcacccac 310  Q
    | ||| |||||||||||||||||||||||| |||||    
T  34697379 gcatgcctctacgcatgagccggattagtcgcccac 34697414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 188 - 303
Target Start/End: Original strand, 6563396 - 6563513
Alignment:
Q  188 ttggacttcggtagcaaggagcttctttcaaggatgtatctgaagaataccgg-ttcgattctcaggggaaacaacgctcggc-agtgcgtatgtctcta 285  Q
    ||||||| | || |||||||||| ||| |||||||||| | |||||| ||||| ||||||||  ||||| ||||||||| ||| |||||  |||||||||    
T  6563396 ttggactccagtggcaaggagctccttccaaggatgtacccgaagaacaccgggttcgattcctagggggaacaacgcttggccagtgcacatgtctcta 6563495  T
Q  286 cgcatgagccggattagt 303  Q
    |||| ||||| |||||||    
T  6563496 cgcacgagccagattagt 6563513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 177 - 304
Target Start/End: Complemental strand, 12744687 - 12744558
Alignment:
Q  177 aaccaagttgtttggacttcggtagcaaggagcttctttcaaggatgtatctgaagaataccgg-ttcgattctcaggggaaacaacgctcggc-agtgc 274  Q
    |||||||||||||||||| | ||  ||  || || ||| |||||| |||||||| ||||| | | ||||||| ||||||| ||||||||| | | |||||    
T  12744687 aaccaagttgtttggactccagtgacattgaactccttccaaggacgtatctgaggaatatcagattcgattttcagggggaacaacgcttgactagtgc 12744588  T
Q  275 gtatgtctctacgcatgagccggattagtc 304  Q
    | |||||||||||||||||||| |||||||    
T  12744587 gcatgtctctacgcatgagccgaattagtc 12744558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 177 - 304
Target Start/End: Complemental strand, 12755677 - 12755548
Alignment:
Q  177 aaccaagttgtttggacttcggtagcaaggagcttctttcaaggatgtatctgaagaataccgg-ttcgattctcaggggaaacaacgctcggc-agtgc 274  Q
    |||||||||||||||||| | ||  ||  || || ||| |||||| |||||||| ||||| | | ||||||| ||||||| ||||||||| | | |||||    
T  12755677 aaccaagttgtttggactccagtgacattgaactccttccaaggacgtatctgaggaatatcagattcgattttcagggggaacaacgcttgactagtgc 12755578  T
Q  275 gtatgtctctacgcatgagccggattagtc 304  Q
    | |||||||||||||||||||| |||||||    
T  12755577 gcatgtctctacgcatgagccgaattagtc 12755548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 239 - 311
Target Start/End: Complemental strand, 28324681 - 28324608
Alignment:
Q  239 ggttcgattctcaggggaaacaacgctcgg-cagtgcgtatgtctctacgcatgagccggattagtcacccacc 311  Q
    |||||||||| | ||||||||||| || || ||||||| ||| |||||||||||||||||||||||||| ||||    
T  28324681 ggttcgattccccggggaaacaacacttggtcagtgcgcatgcctctacgcatgagccggattagtcactcacc 28324608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 269 - 304
Target Start/End: Complemental strand, 45726503 - 45726468
Alignment:
Q  269 cagtgcgtatgtctctacgcatgagccggattagtc 304  Q
    ||||||||||||||||||||||||||||||||||||    
T  45726503 cagtgcgtatgtctctacgcatgagccggattagtc 45726468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 177 - 322
Target Start/End: Complemental strand, 50503525 - 50503378
Alignment:
Q  177 aaccaagttgtttggacttcggtagcaaggagcttctttcaaggatgtatctgaagaata-ccggttcgattctcaggggaaacaacgctcg-gcagtgc 274  Q
    ||||||||||| ||||||   || || ||||||| |||||||||| ||||| |  ||||| | |||||||||| |||||| |||||| || |  ||||||    
T  50503525 aaccaagttgtatggactctagtggcgaggagctcctttcaaggacgtatccggggaatatcgggttcgattcccagggggaacaacacttgaccagtgc 50503426  T
Q  275 gtatgtctctacgcatgagccggattagtcacccaccagtagtgggtc 322  Q
    | ||| ||||||||| |||||||||| ||| ||||||| | |||||||    
T  50503425 gcatgcctctacgcacgagccggatttgtcgcccaccaatggtgggtc 50503378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 201 - 301
Target Start/End: Original strand, 10336484 - 10336586
Alignment:
Q  201 gcaaggagcttctttcaaggatgtatctgaagaataccgg-ttcgattctcaggggaaacaacgctcggc-agtgcgtatgtctctacgcatgagccgga 298  Q
    |||||||||| ||| ||| || ||||| | |||||| ||| ||||||| ||||||| ||||||||| | | |||||| ||| ||||||||||||||||||    
T  10336484 gcaaggagctccttccaaagacgtatccggagaatatcgggttcgattttcagggggaacaacgcttgaccagtgcgcatgcctctacgcatgagccgga 10336583  T
Q  299 tta 301  Q
    |||    
T  10336584 tta 10336586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 239 - 304
Target Start/End: Complemental strand, 31576648 - 31576582
Alignment:
Q  239 ggttcgattctcaggggaaacaacgctcgg-cagtgcgtatgtctctacgcatgagccggattagtc 304  Q
    ||||||||||||||||||||||| ||| || || ||||| || ||||||||||||||||| ||||||    
T  31576648 ggttcgattctcaggggaaacaatgcttggccaatgcgtgtgcctctacgcatgagccggcttagtc 31576582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 240 - 304
Target Start/End: Complemental strand, 17092577 - 17092512
Alignment:
Q  240 gttcgattctcaggggaaacaacgctcggc-agtgcgtatgtctctacgcatgagccggattagtc 304  Q
    |||||||| ||||||||||||||| | ||| |||| ||||| ||||||||| ||||||||||||||    
T  17092577 gttcgattttcaggggaaacaacgattggccagtgtgtatgcctctacgcacgagccggattagtc 17092512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 177 - 304
Target Start/End: Complemental strand, 33418279 - 33418150
Alignment:
Q  177 aaccaagttgtttggacttcggtagcaaggagcttctttcaaggatgtatctgaagaataccgg-ttcgattctcaggggaaacaacgctcggc-agtgc 274  Q
    ||||||||||||||| || | || |||||||||| ||| ||| || ||| | | |||||||||| ||||||||  |||||  |||||||| ||| |||||    
T  33418279 aaccaagttgtttgggctccagtggcaaggagctccttccaaagacgtacccggagaataccggattcgattcctaggggggacaacgcttggccagtgc 33418180  T
Q  275 gtatgtctctacgcatgagccggattagtc 304  Q
    | ||| ||||| ||| ||||||||||||||    
T  33418179 gcatgcctctatgcacgagccggattagtc 33418150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 239 - 311
Target Start/End: Complemental strand, 43959922 - 43959849
Alignment:
Q  239 ggttcgattctcaggggaaacaacgctcggc-agtgcgtatgtctctacgcatgagccggattagtcacccacc 311  Q
    ||||| |||| |||||| ||||||||| ||| |||||| ||| ||||||||| |||||||||||||| ||||||    
T  43959922 ggttcaattcccagggggaacaacgcttggccagtgcgcatgcctctacgcacgagccggattagtcgcccacc 43959849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 177 - 265
Target Start/End: Complemental strand, 937649 - 937561
Alignment:
Q  177 aaccaagttgtttggacttcggtagcaaggagcttctttcaaggatgtatctgaagaataccggttcgattctcaggggaaacaacgct 265  Q
    ||||||||||||||| || | ||  ||| |||||||||||||||| |||   || |||||| |||||||||| |||||| |||||||||    
T  937649 aaccaagttgtttgggctccagtgacaatgagcttctttcaaggacgtactcgaggaatacgggttcgattcccagggggaacaacgct 937561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 201 - 311
Target Start/End: Original strand, 16956434 - 16956546
Alignment:
Q  201 gcaaggagcttctttcaaggatgtatctgaagaataccg-gttcgattctcaggggaaacaacgctcggc-agtgcgtatgtctctacgcatgagccgga 298  Q
    |||||||||| ||| |||||| ||| | |  |||||||| ||||| |||||||||| ||||||| | | | |||||| ||| ||||||||| ||||||||    
T  16956434 gcaaggagctccttccaaggacgtacccggggaataccgtgttcggttctcaggggtaacaacgtttgaccagtgcgcatgcctctacgcacgagccgga 16956533  T
Q  299 ttagtcacccacc 311  Q
    |||||||| ||||    
T  16956534 ttagtcactcacc 16956546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 187 - 304
Target Start/End: Complemental strand, 45362036 - 45361917
Alignment:
Q  187 tttggacttcggtagcaaggagcttctttcaaggatgtatctgaagaataccgg-ttcgattctcaggggaaacaacgctcggc-agtgcgtatgtctct 284  Q
    ||||| |||| || |||||||||| ||| |||||| ||| |    ||||||||| ||||||||||||| | ||||||||| ||| |||||| ||| | ||    
T  45362036 tttgggcttcagtggcaaggagctccttccaaggacgtaccctgggaataccgggttcgattctcaggaggaacaacgcttggccagtgcgcatgccact 45361937  T
Q  285 acgcatgagccggattagtc 304  Q
    |||||| |||||||||||||    
T  45361936 acgcataagccggattagtc 45361917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 176 - 304
Target Start/End: Original strand, 10422731 - 10422861
Alignment:
Q  176 taaccaagttgtttggacttcggtagcaaggagcttctttcaaggatgtatctgaagaatacc-ggttcgattctcaggggaaacaacgctcgg-cagtg 273  Q
    |||||||||||||||| || | || |||||||||| ||| ||| || ||||  |  ||||||| |||||||||   ||| | |||||| || || |||||    
T  10422731 taaccaagttgtttgggctacagtggcaaggagctccttccaatgacgtattcggggaataccgggttcgatttctaggaggaacaacacttggccagtg 10422830  T
Q  274 cgtatgtctctacgcatgagccggattagtc 304  Q
    || ||| ||||||||||||||||||||||||    
T  10422831 cgcatgcctctacgcatgagccggattagtc 10422861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 232 - 304
Target Start/End: Complemental strand, 14254377 - 14254303
Alignment:
Q  232 gaataccg-gttcgattctcaggggaaacaacgctcggc-agtgcgtatgtctctacgcatgagccggattagtc 304  Q
    |||||||| |||||||| ||||||| ||||||||| ||| ||| || ||| || |||||||||||||||||||||    
T  14254377 gaataccgagttcgattttcagggggaacaacgcttggccagtacgcatgcctttacgcatgagccggattagtc 14254303  T

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Target: chr1; HSP #27
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 239 - 304
Target Start/End: Complemental strand, 17642105 - 17642039
Alignment:
Q  239 ggttcgattctcaggggaaacaacgctcggc-agtgcgtatgtctctacgcatgagccggattagtc 304  Q
    |||||||||| |||||| |||||| || ||| |||||| ||| ||||||||| ||||||||||||||    
T  17642105 ggttcgattcccagggggaacaacacttggccagtgcgcatgcctctacgcacgagccggattagtc 17642039  T

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Target: chr1; HSP #28
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 239 - 304
Target Start/End: Complemental strand, 21849305 - 21849240
Alignment:
Q  239 ggttcgattctcaggggaaacaacgctcggc-agtgcgtatgtctctacgcatgagccggattagtc 304  Q
    |||||||||| |||||||| ||||||| ||| |||||| ||| ||||||||| ||||||||||||||    
T  21849305 ggttcgattcccaggggaa-caacgcttggctagtgcgcatgcctctacgcacgagccggattagtc 21849240  T

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Target: chr1; HSP #29
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 180 - 304
Target Start/End: Complemental strand, 47313059 - 47312934
Alignment:
Q  180 caagttgtttggacttcggtagcaaggagcttctttcaaggatgtatctgaagaataccgg-ttcgattctcaggggaaacaacgctcggc-agtgcgta 277  Q
    |||||||||||| || | || |||| ||| | ||| |||||| |||||||  ||||||||| || |||||  ||||||| ||||| | ||| ||||||||    
T  47313059 caagttgtttgggctccagtggcaacgagatccttccaaggacgtatctggggaataccgggtttgattcctaggggaa-caacgtttggccagtgcgta 47312961  T
Q  278 tgtctctacgcatgagccggattagtc 304  Q
    || ||||||||||||||| ||||||||    
T  47312960 tgcctctacgcatgagccagattagtc 47312934  T

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Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 180 - 311
Target Start/End: Complemental strand, 5064004 - 5063872
Alignment:
Q  180 caagttgtttggacttcggtagcaaggagcttctttcaaggatgtatctgaagaataccgg-ttcgattctcaggggaaacaacgctcggc-agtgcgta 277  Q
    |||||||||| | ||  ||| ||||| |||| ||| |||||| |||||||  |||||  || ||||||||| ||||| | ||||||| ||| ||||||||    
T  5064004 caagttgtttaggctctggtggcaagaagctccttccaaggacgtatctggggaatattggattcgattcttaggggca-caacgcttggccagtgcgta 5063906  T
Q  278 tgtctctacgcatgagccggattagtcacccacc 311  Q
    |||||||| ||| |||| ||||||||| ||||||    
T  5063905 tgtctctatgcacgagctggattagtcgcccacc 5063872  T

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Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 177 - 304
Target Start/End: Original strand, 8763935 - 8764064
Alignment:
Q  177 aaccaagttgtttggacttcggtagcaaggagcttctttcaaggatgtatctgaagaataccgg-ttcgattctcaggggaaacaacgctcggc-agtgc 274  Q
    |||||||||| |||| || | || |||||||||| ||| |||||| ||| | |  ||||| ||| |||| ||| |||||| |||||| || ||| |||||    
T  8763935 aaccaagttgcttgggctcccgtggcaaggagctccttccaaggacgtacccggggaatatcgggttcgtttcccagggggaacaacacttggccagtgc 8764034  T
Q  275 gtatgtctctacgcatgagccggattagtc 304  Q
    | ||| ||||||||| ||||||||||||||    
T  8764035 gcatgcctctacgcacgagccggattagtc 8764064  T

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Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 217 - 304
Target Start/End: Original strand, 13265922 - 13266011
Alignment:
Q  217 aaggatgtatctgaagaatacc-ggttcgattctcaggggaaacaacg-ctcggcagtgcgtatgtctctacgcatgagccggattagtc 304  Q
    ||||| ||||| || ||||||| ||||||||||  |||| |||||||| || | ||||||| ||| ||||||||||||||||| ||||||    
T  13265922 aaggacgtatccgaggaatacctggttcgattcctagggaaaacaacgtctagccagtgcgcatgcctctacgcatgagccgggttagtc 13266011  T

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Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 177 - 304
Target Start/End: Complemental strand, 18708704 - 18708575
Alignment:
Q  177 aaccaagttgtttggacttcggtagcaaggagcttctttcaaggatgtatctgaagaatac-cggttcgattctcaggggaaacaacgctcggc-agtgc 274  Q
    |||||||||||||||||||||||   ||||| || ||| |||| |  || |||| ||||||  |||||||||  |||||||| ||| ||| ||| |||||    
T  18708704 aaccaagttgtttggacttcggtgataaggaactccttccaagaacatacctgaggaatactgggttcgatttccaggggaagcaatgcttggctagtgc 18708605  T
Q  275 gtatgtctctacgcatgagccggattagtc 304  Q
    | ||| |||||| |||||||| ||||||||    
T  18708604 gcatgcctctacacatgagccagattagtc 18708575  T

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Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 177 - 265
Target Start/End: Original strand, 51437413 - 51437502
Alignment:
Q  177 aaccaagttgtttggacttcggtagcaaggagcttctttcaaggatgtatctgaagaata-ccggttcgattctcaggggaaacaacgct 265  Q
    ||||||||||||||| |||| ||  ||| ||||| |||||||||| ||||| || ||||| | |||||||||| || ||| |||||||||    
T  51437413 aaccaagttgtttgggcttcagtgacaatgagctcctttcaaggacgtatccgaggaatatcgggttcgattcccatggggaacaacgct 51437502  T

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Target: scaffold0223 (Bit Score: 43; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0223
Description:

Target: scaffold0223; HSP #1
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 239 - 304
Target Start/End: Original strand, 16888 - 16954
Alignment:
Q  239 ggttcgattctcaggggaaacaacgctcgg-cagtgcgtatgtctctacgcatgagccggattagtc 304  Q
    ||||| ||||||||||||||||||||| || ||||||||||||||||||||| ||||| ||||||||    
T  16888 ggttcaattctcaggggaaacaacgcttggtcagtgcgtatgtctctacgcacgagccagattagtc 16954  T

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Target: scaffold0005 (Bit Score: 43; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 177 - 309
Target Start/End: Complemental strand, 271237 - 271103
Alignment:
Q  177 aaccaagttgtttggacttcggtagcaaggagcttctttcaaggatgtatctgaagaataccgg-ttcgattctcaggggaaacaacgctcgg-cagtgc 274  Q
    |||||||||| |||| ||  ||| |||||||||| ||| |||||| ||| | | |||||| ||| |||||||| |||||| ||||||||| || ||||||    
T  271237 aaccaagttgcttgggctctggtggcaaggagctccttccaaggacgtacccggagaatatcgggttcgattcccagggggaacaacgcttggtcagtgc 271138  T
Q  275 gtatgtctctacgcatgagccggattagtcaccca 309  Q
    | ||||||||||||| ||||||| |||||| ||||    
T  271137 gcatgtctctacgcacgagccgggttagtcgccca 271103  T

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Target: scaffold0341 (Bit Score: 38; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0341
Description:

Target: scaffold0341; HSP #1
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 188 - 303
Target Start/End: Original strand, 18589 - 18706
Alignment:
Q  188 ttggacttcggtagcaaggagcttctttcaaggatgtatctgaagaataccgg-ttcgattctcaggggaaacaacgctcggc-agtgcgtatgtctcta 285  Q
    ||||||| | || |||||||||| ||| |||||||||| | |||||| ||||| ||||||||  ||||| ||||||||| ||| |||||  |||||||||    
T  18589 ttggactccagtggcaaggagctccttccaaggatgtacccgaagaacaccgggttcgattcctagggggaacaacgcttggccagtgcacatgtctcta 18688  T
Q  286 cgcatgagccggattagt 303  Q
    |||| ||||| |||||||    
T  18689 cgcacgagccagattagt 18706  T

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Target: scaffold0010 (Bit Score: 36; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 241 - 311
Target Start/End: Complemental strand, 155809 - 155738
Alignment:
Q  241 ttcgattctcaggggaaacaacgctcggc-agtgcgtatgtctctacgcatgagccggattagtcacccacc 311  Q
    |||||||| |||||| ||||||||| ||| |||||| ||| ||||||||| |||||||||||||| ||||||    
T  155809 ttcgattcccagggggaacaacgcttggctagtgcgcatgcctctacgcacgagccggattagtcgcccacc 155738  T

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Target: scaffold0291 (Bit Score: 35; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0291
Description:

Target: scaffold0291; HSP #1
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 239 - 304
Target Start/End: Original strand, 6864 - 6930
Alignment:
Q  239 ggttcgattctcaggggaaacaacgctcggc-agtgcgtatgtctctacgcatgagccggattagtc 304  Q
    |||||||||| |||||| |||||| || ||| |||||| ||| ||||||||||||||||||||||||    
T  6864 ggttcgattcccagggggaacaacacttggccagtgcgcatgcctctacgcatgagccggattagtc 6930  T

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Target: scaffold0009 (Bit Score: 35; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 176 - 265
Target Start/End: Original strand, 9381 - 9471
Alignment:
Q  176 taaccaagttgtttggacttcggtagcaaggagcttctttcaaggatgtatctgaagaatacc-ggttcgattctcaggggaaacaacgct 265  Q
    ||||||||||| |||| || ||||| ||||||||| |||||||||| |||  ||  ||||||| |||||||||| |||||| |||||||||    
T  9381 taaccaagttgcttgggctccggtaacaaggagctcctttcaaggacgtacttggggaataccgggttcgattcccagggggaacaacgct 9471  T

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Target: scaffold0006 (Bit Score: 34; Significance: 0.000000001; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 239 - 311
Target Start/End: Original strand, 68526 - 68596
Alignment:
Q  239 ggttcgattctcaggggaaacaacgctcggcagtgcgtatgtctctacgcatgagccggattagtcacccacc 311  Q
    |||||||||| |||||| ||||||||| ||  ||||| ||| ||||||||| |||||||||||||| ||||||    
T  68526 ggttcgattcccagggggaacaacgcttgg--gtgcgcatgcctctacgcacgagccggattagtcgcccacc 68596  T

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Target: scaffold0016 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 223 - 304
Target Start/End: Complemental strand, 8818 - 8735
Alignment:
Q  223 gtatctgaagaataccgg-ttcgattctcaggggaaacaacgctcggc-agtgcgtatgtctctacgcatgagccggattagtc 304  Q
    ||||| || ||||||||| |||||||| |||||| ||||||||| ||| ||||||  || |||||||||||||| |||||||||    
T  8818 gtatcagaggaataccgggttcgattcccagggggaacaacgcttggccagtgcgcttgcctctacgcatgagctggattagtc 8735  T

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Target: scaffold0002 (Bit Score: 30; Significance: 0.0000003; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 173 - 265
Target Start/End: Complemental strand, 412193 - 412100
Alignment:
Q  173 aaataaccaagttgtttggacttcggtagcaaggagcttctttcaaggatgtatctgaagaataccg-gttcgattctcaggggaaacaacgct 265  Q
    |||||||||||||| |||| |||| || || | ||||| ||| |||||| ||||| |  |||||||| ||||||||| |||||| |||||||||    
T  412193 aaataaccaagttgcttgggcttcagtggcgatgagctccttccaaggacgtatccggggaataccgagttcgattcacagggggaacaacgct 412100  T

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