View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF5905-Insertion-12 (Length: 211)

Name: NF5905-Insertion-12
Description: NF5905
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF5905-Insertion-12
NF5905-Insertion-12
[»] chr6 (31 HSPs)
chr6 (9-208)||(5065568-5065767)
chr6 (35-208)||(5253526-5253699)
chr6 (23-208)||(5346006-5346191)
chr6 (23-194)||(5126762-5126933)
chr6 (9-194)||(5100937-5101119)
chr6 (23-194)||(5242645-5242816)
chr6 (30-194)||(5136059-5136220)
chr6 (30-194)||(5439005-5439166)
chr6 (9-204)||(5177720-5177915)
chr6 (9-204)||(5279545-5279740)
chr6 (9-204)||(5689022-5689217)
chr6 (9-192)||(5398042-5398222)
chr6 (9-194)||(5352982-5353164)
chr6 (30-194)||(5448603-5448764)
chr6 (30-194)||(5156153-5156314)
chr6 (11-177)||(5072803-5072966)
chr6 (9-190)||(5351398-5351576)
chr6 (9-194)||(5372091-5372273)
chr6 (9-194)||(5098205-5098387)
chr6 (30-194)||(5334173-5334333)
chr6 (25-194)||(23127445-23127611)
chr6 (11-68)||(2939028-2939085)
chr6 (30-102)||(5124583-5124655)
chr6 (30-66)||(5180914-5180950)
chr6 (109-194)||(5283431-5283513)
chr6 (32-74)||(5256253-5256295)
chr6 (32-74)||(5283363-5283405)
chr6 (30-68)||(5427017-5427055)
chr6 (166-194)||(5181047-5181075)
chr6 (150-194)||(5256407-5256451)
chr6 (150-194)||(5426894-5426938)
[»] chr2 (1 HSPs)
chr2 (30-204)||(22583427-22583601)
[»] chr4 (7 HSPs)
chr4 (19-195)||(4362545-4362718)
chr4 (9-194)||(4319421-4319603)
chr4 (23-195)||(4336895-4337064)
chr4 (19-195)||(4122773-4122946)
chr4 (19-209)||(4346335-4346529)
chr4 (23-90)||(4132748-4132815)
chr4 (9-71)||(25568954-25569016)
[»] chr7 (2 HSPs)
chr7 (9-204)||(36213040-36213232)
chr7 (30-76)||(18936566-18936612)
[»] chr3 (4 HSPs)
chr3 (9-194)||(47985512-47985694)
chr3 (9-194)||(47994799-47994981)
chr3 (9-194)||(48004086-48004268)
chr3 (9-194)||(48013371-48013553)
[»] scaffold0294 (1 HSPs)
scaffold0294 (30-117)||(8017-8104)


Alignment Details
Target: chr6 (Bit Score: 156; Significance: 5e-83; HSPs: 31)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 156; E-Value: 5e-83
Query Start/End: Original strand, 9 - 208
Target Start/End: Original strand, 5065568 - 5065767
Alignment:
Q  9 caaaggagattaacgcctctatcttatagagctgaatggtggcctttgtgtaatttttcaccaacaaatttgtgaggccatcagatgctatgttatccgt 108  Q
    |||||||||||||||||||| |||||||||||||||||||||  |||||||||||||| ||||||||||||||||||||||||||||||||||||||||     
T  5065568 caaaggagattaacgcctctctcttatagagctgaatggtggattttgtgtaattttttaccaacaaatttgtgaggccatcagatgctatgttatccgg 5065667  T
Q  109 ggttgaagaatagataatgcatatcattatcgtcttcaacatacgcccttccatttgagggacttcaaaagttacagaagaacctttacaattgaaagtt 208  Q
    |||||||||||||| ||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||  |||||| |||||    
T  5065668 ggttgaagaatagacaatgcatatcattattgtcttcaacatacgccctttcatttgagggacttcaaaagttacagaagaaccttcgcaattgtaagtt 5065767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 114; E-Value: 5e-58
Query Start/End: Original strand, 35 - 208
Target Start/End: Complemental strand, 5253699 - 5253526
Alignment:
Q  35 tagagctgaatggtggcctttgtgtaatttttcaccaacaaatttgtgaggccatcagatgctatgttatccgtggttgaagaatagataatgcatatca 134  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||| | ||||||| | ||||||||| |||| ||||| ||||     
T  5253699 tagagctgaatggtggcctttgtgtaattttttaccaacaaatttgtgaagccatcagatgttgtgttatctggggttgaagattagacaatgcttatct 5253600  T
Q  135 ttatcgtcttcaacatacgcccttccatttgagggacttcaaaagttacagaagaacctttacaattgaaagtt 208  Q
    |||| |||||||||||||||||||||| ||||||||||| ||||| |||||||||||||| |||||||||||||    
T  5253599 ttattgtcttcaacatacgcccttccaattgagggactttaaaaggtacagaagaaccttcacaattgaaagtt 5253526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 23 - 208
Target Start/End: Complemental strand, 5346191 - 5346006
Alignment:
Q  23 gcctctatcttatagagctgaatggtggcctttgtgtaatttttcaccaacaaatttgtgaggccatcagatgctatgttatccgtggttgaagaataga 122  Q
    |||||| |||| || ||||||||||| |||||||||||||||||||||||||| ||| | ||||||||||||| ||| |||||||  |||||||||||||    
T  5346191 gcctctctcttgtatagctgaatggtagcctttgtgtaatttttcaccaacaagtttctcaggccatcagatgttatattatccgaagttgaagaataga 5346092  T
Q  123 taatgcatatcattatcgtcttcaacatacgcccttccatttgagggacttcaaaagttacagaagaacctttacaattgaaagtt 208  Q
     ||  |||||| |||| ||||||||||| |||||||||| |||||| ||||||||||| ||||||||||||| | |||||||||||    
T  5346091 caacacatatcgttattgtcttcaacattcgcccttccacttgaggaacttcaaaagtaacagaagaaccttcagaattgaaagtt 5346006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 23 - 194
Target Start/End: Original strand, 5126762 - 5126933
Alignment:
Q  23 gcctctatcttatagagctgaatggtggcctttgtgtaatttttcaccaacaaatttgtgaggccatcagatgctatgttatccgtggttgaagaataga 122  Q
    |||||| |||||||||| |||||||||||||| ||||||||||||||||||||  |||| |||||||| |||| ||||||||||  ||||||||||||||    
T  5126762 gcctctctcttatagagttgaatggtggccttcgtgtaatttttcaccaacaagcttgtaaggccatctgatgttatgttatccaaggttgaagaataga 5126861  T
Q  123 taatgcatatcattatcgtcttcaacatacgcccttccatttgagggacttcaaaagttacagaagaacctt 194  Q
     ||||||||||||||   |||||||| ||||||||| || |||||| |||||||||||||| ||||||||||    
T  5126862 caatgcatatcattactttcttcaacgtacgccctttcacttgaggtacttcaaaagttaccgaagaacctt 5126933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 9 - 194
Target Start/End: Original strand, 5100937 - 5101119
Alignment:
Q  9 caaaggagattaacgcctctatcttatagagctgaatggtggcctttgtgtaatttttcaccaacaaatttgtgaggccatcagatgctatgttatccgt 108  Q
    ||||||||| ||| |||||  |||||||||||||||||||||||||||||||||||||||| |||| |||| | ||||||   |||| ||||||||| |     
T  5100937 caaaggagactaatgcctcgctcttatagagctgaatggtggcctttgtgtaatttttcactaacacatttttaaggccacttgatgttatgttatctgg 5101036  T
Q  109 ggttgaagaatagataatgcatatcattatcgtcttcaacatacgcccttccatttgagggacttcaaaagttacagaagaacctt 194  Q
    |||||||| ||||| |||||| ||||||   ||||||||  |||||||||||| |||||||||||| |||||||||||||||||||    
T  5101037 ggttgaagtatagacaatgcacatcatt---gtcttcaagttacgcccttccacttgagggacttctaaagttacagaagaacctt 5101119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 23 - 194
Target Start/End: Original strand, 5242645 - 5242816
Alignment:
Q  23 gcctctatcttatagagctgaatggtggcctttgtgtaatttttcaccaacaaatttgtgaggccatcagatgctatgttatccgtggttgaagaataga 122  Q
    |||||| |||| ||||||||||||||||||||||||||||||||||| ||||| |||   ||||||||||||| |||  ||||||  |||||||||||||    
T  5242645 gcctctctcttgtagagctgaatggtggcctttgtgtaatttttcactaacaagtttccaaggccatcagatgttatactatccgaagttgaagaataga 5242744  T
Q  123 taatgcatatcattatcgtcttcaacatacgcccttccatttgagggacttcaaaagttacagaagaacctt 194  Q
     |   |||||| |||| ||||||||||| |||||||||| |||||||||||||||||| |||||||||||||    
T  5242745 cagcacatatcgttattgtcttcaacattcgcccttccacttgagggacttcaaaagtaacagaagaacctt 5242816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 30 - 194
Target Start/End: Original strand, 5136059 - 5136220
Alignment:
Q  30 tcttatagagctgaatggtggcctttgtgtaatttttcaccaacaaatttgtgaggccatcagatgctatgttatccgtggttgaagaatagataatgca 129  Q
    |||| |||||||||||||||||||||||||||||||| ||||||| |||| | ||||||   |||| ||||||||| | |||||||| ||||| ||||||    
T  5136059 tcttgtagagctgaatggtggcctttgtgtaattttttaccaacacatttttaaggccacttgatgttatgttatctggggttgaagtatagacaatgca 5136158  T
Q  130 tatcattatcgtcttcaacatacgcccttccatttgagggacttcaaaagttacagaagaacctt 194  Q
     ||||||   ||||||||  |||||||||||| |||||||||||| |||||||||||||||||||    
T  5136159 catcatt---gtcttcaagttacgcccttccacttgagggacttctaaagttacagaagaacctt 5136220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 30 - 194
Target Start/End: Complemental strand, 5439166 - 5439005
Alignment:
Q  30 tcttatagagctgaatggtggcctttgtgtaatttttcaccaacaaatttgtgaggccatcagatgctatgttatccgtggttgaagaatagataatgca 129  Q
    |||||||||||||||||||||||||||||| |||| ||||||| | |||| | |||| ||| |||| |||||||||||  ||||||||||||| ||||||    
T  5439166 tcttatagagctgaatggtggcctttgtgtgatttatcaccaatacatttataaggctatctgatgttatgttatccggagttgaagaatagacaatgca 5439067  T
Q  130 tatcattatcgtcttcaacatacgcccttccatttgagggacttcaaaagttacagaagaacctt 194  Q
     |||| |   | | ||||  |||||||||||| ||||||||||| ||||||||||||||||||||    
T  5439066 catcaat---gacatcaaattacgcccttccacttgagggacttgaaaagttacagaagaacctt 5439005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 68; E-Value: 1e-30
Query Start/End: Original strand, 9 - 204
Target Start/End: Complemental strand, 5177915 - 5177720
Alignment:
Q  9 caaaggagattaacgcctctatcttatagagctgaatggtggcctttgtgtaatttttcaccaacaaatttgtgaggccatcagatgctatgttatccgt 108  Q
    ||||||||  ||| |||||| ||||||| |||||||||||||| ||||||||||| || |||||||| ||||  |||||||  |||| ||| ||||||      
T  5177915 caaaggaggctaatgcctctctcttataaagctgaatggtggcttttgtgtaattcttaaccaacaagtttgcaaggccatttgatgttatattatccag 5177816  T
Q  109 ggttgaagaatagataatgcatatcattatcgtcttcaacatacgcccttccatttgagggacttcaaaagttacagaagaacctttacaattgaa 204  Q
    |||||||||||||  |||||||||||| || ||||| ||  | | |||||||| |||||||||||||||  |||| ||||||||||  ||||||||    
T  5177815 ggttgaagaatagtcaatgcatatcatcattgtctttaaagtgcacccttccacttgagggacttcaaacattaccgaagaaccttcgcaattgaa 5177720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 68; E-Value: 1e-30
Query Start/End: Original strand, 9 - 204
Target Start/End: Complemental strand, 5279740 - 5279545
Alignment:
Q  9 caaaggagattaacgcctctatcttatagagctgaatggtggcctttgtgtaatttttcaccaacaaatttgtgaggccatcagatgctatgttatccgt 108  Q
    ||||||||  ||| |||||| ||||||| |||||||||||||| ||||||||||| ||||||||||| ||||  |||||||  |||| ||| ||||||      
T  5279740 caaaggaggctaatgcctctctcttataaagctgaatggtggcttttgtgtaattcttcaccaacaagtttgcaaggccatttgatgttatattatccag 5279641  T
Q  109 ggttgaagaatagataatgcatatcattatcgtcttcaacatacgcccttccatttgagggacttcaaaagttacagaagaacctttacaattgaa 204  Q
    |||||||||||||  |||||||||||| |  ||||| ||  | | |||||||| |||||||||||||||  |||| ||||||||||  ||||||||    
T  5279640 ggttgaagaatagtcaatgcatatcatcaatgtctttaaagtgcacccttccacttgagggacttcaaacattaccgaagaaccttcgcaattgaa 5279545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 68; E-Value: 1e-30
Query Start/End: Original strand, 9 - 204
Target Start/End: Original strand, 5689022 - 5689217
Alignment:
Q  9 caaaggagattaacgcctctatcttatagagctgaatggtggcctttgtgtaatttttcaccaacaaatttgtgaggccatcagatgctatgttatccgt 108  Q
    ||||||||| ||| |||||  ||||||| |||||||||||||| ||||||||||| ||||||||||| ||||  |||||||  |||| ||||||||||      
T  5689022 caaaggagactaatgcctcgctcttataaagctgaatggtggcttttgtgtaattcttcaccaacaagtttgcaaggccatttgatgttatgttatccag 5689121  T
Q  109 ggttgaagaatagataatgcatatcattatcgtcttcaacatacgcccttccatttgagggacttcaaaagttacagaagaacctttacaattgaa 204  Q
    ||||| |||||||   ||||||||||| |  ||||| ||  | |||||||||| |||||||||||||||  |||| ||||||||||  ||||||||    
T  5689122 ggttgtagaatagtcgatgcatatcatcaatgtctttaaagtgcgcccttccacttgagggacttcaaacattaccgaagaaccttcgcaattgaa 5689217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 9 - 192
Target Start/End: Complemental strand, 5398222 - 5398042
Alignment:
Q  9 caaaggagattaacgcctctatcttatagagctgaatggtggcctttgtgtaatttttcaccaacaaatttgtgaggccatcagatgctatgttatccgt 108  Q
    ||||||||| |||||||||  ||||||||||||||||||||||||||||||||||| |||| ||||  ||| | ||||||  ||||| ||  ||||||      
T  5398222 caaaggagaataacgcctcactcttatagagctgaatggtggcctttgtgtaatttatcactaacatgtttttaaggccactagatgttacattatccag 5398123  T
Q  109 ggttgaagaatagataatgcatatcattatcgtcttcaacatacgcccttccatttgagggacttcaaaagttacagaagaacc 192  Q
     ||||||| ||| | |||||| ||||||   ||||||||  ||||||||||||  ||||| ||||||||||||| |||||||||    
T  5398122 agttgaagtatacacaatgcacatcatt---gtcttcaagttacgcccttccacatgaggaacttcaaaagttaaagaagaacc 5398042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 9 - 194
Target Start/End: Original strand, 5352982 - 5353164
Alignment:
Q  9 caaaggagattaacgcctctatcttatagagctgaatggtggcctttgtgtaatttttcaccaacaaatttgtgaggccatcagatgctatgttatccgt 108  Q
    ||||||| ||||| |||||| ||||||| ||||||||||| ||||||||||||||||| | ||||| |||| | |||||||  || | ||||||||        
T  5352982 caaaggaaattaatgcctctctcttataaagctgaatggtagcctttgtgtaattttttagcaacacatttttaaggccatatgaagttatgttattttg 5353081  T
Q  109 ggttgaagaatagataatgcatatcattatcgtcttcaacatacgcccttccatttgagggacttcaaaagttacagaagaacctt 194  Q
    |||||| | |||||||||||| ||||||   ||||||||  ||||||||||||   ||||||| | ||||||||||||||||||||    
T  5353082 ggttgacgtatagataatgcacatcatt---gtcttcaagttacgcccttccaccagagggacatgaaaagttacagaagaacctt 5353164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 30 - 194
Target Start/End: Complemental strand, 5448764 - 5448603
Alignment:
Q  30 tcttatagagctgaatggtggcctttgtgtaatttttcaccaacaaatttgtgaggccatcagatgctatgttatccgtggttgaagaatagataatgca 129  Q
    |||||||||  |||||||| ||||||||||||||||||||||||| |||| | ||||||  ||||| ||  ||||| | |||||||| ||||| ||||||    
T  5448764 tcttatagatttgaatggtagcctttgtgtaatttttcaccaacacatttttaaggccactagatgttacattatctggggttgaagtatagacaatgca 5448665  T
Q  130 tatcattatcgtcttcaacatacgcccttccatttgagggacttcaaaagttacagaagaacctt 194  Q
     |||| |   | | ||||   |||| |||||| ||||||||||||||||||||||||||||||||    
T  5448664 catcaat---gacgtcaattgacgctcttccacttgagggacttcaaaagttacagaagaacctt 5448603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 30 - 194
Target Start/End: Original strand, 5156153 - 5156314
Alignment:
Q  30 tcttatagagctgaatggtggcctttgtgtaatttttcaccaacaaatttgtgaggccatcagatgctatgttatccgtggttgaagaatagataatgca 129  Q
    ||||||| |||||||||||||||||||||||||||||||  ||||  ||| | ||||||  | ||| ||  ||||| | |||||||| ||||| ||||||    
T  5156153 tcttataaagctgaatggtggcctttgtgtaatttttcaataacatgtttttaaggccactacatgttacattatctggggttgaagtatagacaatgca 5156252  T
Q  130 tatcattatcgtcttcaacatacgcccttccatttgagggacttcaaaagttacagaagaacctt 194  Q
     ||||||   ||||||||  |||||||||||| |||||| ||||||||  | |||||||||||||    
T  5156253 catcatt---gtcttcaagttacgcccttccacttgaggaacttcaaatttcacagaagaacctt 5156314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 11 - 177
Target Start/End: Original strand, 5072803 - 5072966
Alignment:
Q  11 aaggagattaacgcctctatcttatagagctgaatggtggcctttgtgtaatttttcaccaacaaatttgtgaggccatcagatgctatgttatccgtgg 110  Q
    ||||||| ||| |||||| ||||||| || ||||||||||| || |||||||||||||||| ||| ||| | ||||| || ||| |||  ||||  |  |    
T  5072803 aaggagactaatgcctctctcttatatagttgaatggtggctttagtgtaatttttcaccatcaagtttttaaggccgtctgatactacattatttggtg 5072902  T
Q  111 ttgaagaatagataatgcatatcattatcgtcttcaacatacgcccttccatttgagggacttcaaa 177  Q
     ||||||||||| || ||||||||||   |||||||| || |||||||||| |||||||||||||||    
T  5072903 gtgaagaatagacaacgcatatcatt---gtcttcaatatgcgcccttccacttgagggacttcaaa 5072966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 9 - 190
Target Start/End: Complemental strand, 5351576 - 5351398
Alignment:
Q  9 caaaggagattaacgcctctatcttatagagctgaatggtggcctttgtgtaatttttcaccaacaaatttgtgaggccatcagatgctatgttatccgt 108  Q
    ||||||| | ||| |||||  ||||||||||| |||||||||||||||||||||||||||| ||||  ||| | ||||||   |||| || |||| | |     
T  5351576 caaaggaaactaatgcctcactcttatagagccgaatggtggcctttgtgtaatttttcactaacatgtttttaaggccacttgatgttacgttaccagg 5351477  T
Q  109 ggttgaagaatagataatgcatatcattatcgtcttcaacatacgcccttccatttgagggacttcaaaagttacagaagaa 190  Q
    |||||||| |||||  ||||| ||||||   ||||||||   ||||||||||| |||||| ||||||||  | |||||||||    
T  5351476 ggttgaagtatagactatgcacatcatt---gtcttcaagtcacgcccttccacttgaggaacttcaaatttcacagaagaa 5351398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 9 - 194
Target Start/End: Complemental strand, 5372273 - 5372091
Alignment:
Q  9 caaaggagattaacgcctctatcttatagagctgaatggtggcctttgtgtaatttttcaccaacaaatttgtgaggccatcagatgctatgttatccgt 108  Q
    ||||||||| ||| || ||  ||||||| |||||||||||||||||||||||||||||||  ||||  ||| | ||||||  ||||| ||  |||||||     
T  5372273 caaaggagactaatgcttcactcttataaagctgaatggtggcctttgtgtaatttttcaataacatgtttttaaggccactagatgttacattatccgg 5372174  T
Q  109 ggttgaagaatagataatgcatatcattatcgtcttcaacatacgcccttccatttgagggacttcaaaagttacagaagaacctt 194  Q
     ||||||| | ||| | ||||   ||| || ||||||||  |||||||||||| |||||| ||||||||  | |||||||||||||    
T  5372173 agttgaagtacagacattgca---cataattgtcttcaagttacgcccttccacttgaggaacttcaaatttcacagaagaacctt 5372091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 9 - 194
Target Start/End: Complemental strand, 5098387 - 5098205
Alignment:
Q  9 caaaggagattaacgcctctatcttatagagctgaatggtggcctttgtgtaatttttcaccaacaaatttgtgaggccatcagatgctatgttatccgt 108  Q
    |||||||||  || |||||  ||||||||||||||||||||||||||||||  |||||||| ||||  ||| | ||||||   |||   |||||| | |     
T  5098387 caaaggagaccaatgcctcactcttatagagctgaatggtggcctttgtgtggtttttcactaacatgtttttaaggccacttgatatcatgttagctgg 5098288  T
Q  109 ggttgaagaatagataatgcatatcattatcgtcttcaacatacgcccttccatttgagggacttcaaaagttacagaagaacctt 194  Q
    |||||||| ||||| |||||| ||||||   || |||||  |||| ||||||| ||| || |||| ||||||||| ||||||||||    
T  5098287 ggttgaagtatagacaatgcacatcatt---gttttcaagctacggccttccacttggggaacttgaaaagttaccgaagaacctt 5098205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 30 - 194
Target Start/End: Complemental strand, 5334333 - 5334173
Alignment:
Q  30 tcttatagagctgaatggtggcctttgtgtaatttttcaccaacaaatttgtgaggccatcagatgctatgttatccgtggttgaagaatagataatgca 129  Q
    |||||||||| |||||||||||||||||||||||| |||| ||||  ||| | ||||||   |||| ||  ||||| | |||||||  ||||| ||||||    
T  5334333 tcttatagagttgaatggtggcctttgtgtaatttatcactaacatgtttttaaggccacttgatg-tacattatctggggttgaattatagaaaatgca 5334235  T
Q  130 tatcattatcgtcttcaacatacgcccttccatttgagggacttcaaaagttacagaagaacctt 194  Q
     ||||||   ||||||||  ||| |||||||| |||||| ||||||||  | |||||||||||||    
T  5334234 catcatt---gtcttcaagttacccccttccacttgaggaacttcaaatttcacagaagaacctt 5334173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 25 - 194
Target Start/End: Original strand, 23127445 - 23127611
Alignment:
Q  25 ctctatcttatagagctgaatggtggcctttgtgtaatttttcaccaacaaatttgtgaggccatcagatgctatgttatccgtggttgaagaatagata 124  Q
    |||| ||||||||| |||||||||  |||||||||||||||| |||||||  ||| | | |||||| || |  |||||||| | |||||||| || || |    
T  23127445 ctctctcttatagatctgaatggtaccctttgtgtaattttttaccaacacgtttttaacgccatccgaggtaatgttatctggggttgaagtattgaca 23127544  T
Q  125 atgcatatcattatcgtcttcaacatacgcccttccatttgagggacttcaaaagttacagaagaacctt 194  Q
    |  ||   |||||| |||||||   || ||||||||| ||||||  |||||||| |||||||||||||||    
T  23127545 acaca---cattattgtcttcacgttatgcccttccacttgaggagcttcaaaacttacagaagaacctt 23127611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 11 - 68
Target Start/End: Complemental strand, 2939085 - 2939028
Alignment:
Q  11 aaggagattaacgcctctatcttatagagctgaatggtggcctttgtgtaatttttca 68  Q
    ||||||| ||| |||||  |||||||||||||||||||||||||| | ||||||||||    
T  2939085 aaggagactaatgcctcactcttatagagctgaatggtggcctttatataatttttca 2939028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 30 - 102
Target Start/End: Original strand, 5124583 - 5124655
Alignment:
Q  30 tcttatagagctgaatggtggcctttgtgtaatttttcaccaacaaatttgtgaggccatcagatgctatgtt 102  Q
    |||||||||| ||||||||  |||| |||||||||||||||| || | || | |||||||| |||||||||||    
T  5124583 tcttatagagttgaatggtccccttcgtgtaatttttcaccatcacagttttaaggccatccgatgctatgtt 5124655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 30 - 66
Target Start/End: Original strand, 5180914 - 5180950
Alignment:
Q  30 tcttatagagctgaatggtggcctttgtgtaattttt 66  Q
    ||||||||||||||||||| |||||||||||||||||    
T  5180914 tcttatagagctgaatggtagcctttgtgtaattttt 5180950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 109 - 194
Target Start/End: Original strand, 5283431 - 5283513
Alignment:
Q  109 ggttgaagaatagataatgcatatcattatcgtcttcaacatacgcccttccatttgagggacttcaaaagttacagaagaacctt 194  Q
    |||||||| ||||| |||||| ||||||   | ||||||  ||| |||||| | ||||||||| ||||||||||||||||||||||    
T  5283431 ggttgaagtatagacaatgcacatcatt---gacttcaagttacacccttcaacttgagggacatcaaaagttacagaagaacctt 5283513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 32 - 74
Target Start/End: Original strand, 5256253 - 5256295
Alignment:
Q  32 ttatagagctgaatggtggcctttgtgtaatttttcaccaaca 74  Q
    |||||||| || |||||||||||||||||||||||||| ||||    
T  5256253 ttatagagttggatggtggcctttgtgtaatttttcactaaca 5256295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 32 - 74
Target Start/End: Original strand, 5283363 - 5283405
Alignment:
Q  32 ttatagagctgaatggtggcctttgtgtaatttttcaccaaca 74  Q
    |||||||| || |||||||||||||||||||||||||| ||||    
T  5283363 ttatagagttggatggtggcctttgtgtaatttttcactaaca 5283405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 30 - 68
Target Start/End: Complemental strand, 5427055 - 5427017
Alignment:
Q  30 tcttatagagctgaatggtggcctttgtgtaatttttca 68  Q
    ||||||| ||||||||| |||||||||||||||||||||    
T  5427055 tcttataaagctgaatgatggcctttgtgtaatttttca 5427017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 166 - 194
Target Start/End: Original strand, 5181047 - 5181075
Alignment:
Q  166 agggacttcaaaagttacagaagaacctt 194  Q
    |||||||||||||||||||||||||||||    
T  5181047 agggacttcaaaagttacagaagaacctt 5181075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 150 - 194
Target Start/End: Original strand, 5256407 - 5256451
Alignment:
Q  150 tacgcccttccatttgagggacttcaaaagttacagaagaacctt 194  Q
    |||||||||| | ||  ||||||||||||||||||||||||||||    
T  5256407 tacgcccttcaacttcggggacttcaaaagttacagaagaacctt 5256451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 150 - 194
Target Start/End: Complemental strand, 5426938 - 5426894
Alignment:
Q  150 tacgcccttccatttgagggacttcaaaagttacagaagaacctt 194  Q
    |||||||||||| ||| || |||| ||||||||||||||||||||    
T  5426938 tacgcccttccacttgtggaacttgaaaagttacagaagaacctt 5426894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 79; Significance: 4e-37; HSPs: 1)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 30 - 204
Target Start/End: Original strand, 22583427 - 22583601
Alignment:
Q  30 tcttatagagctgaatggtggcctttgtgtaatttttcaccaacaaatttgtgaggccatcagatgctatgttatccgtggttgaagaatagataatgca 129  Q
    |||| |||| |||||||||||||||||| | |||||||||||||||   |||  ||||||| |||  ||||||||||| |||||||||||||| ||||||    
T  22583427 tcttgtagaactgaatggtggcctttgtatgatttttcaccaacaaggctgtagggccatcggatcttatgttatccggggttgaagaatagacaatgca 22583526  T
Q  130 tatcattatcgtcttcaacatacgcccttccatttgagggacttcaaaagttacagaagaacctttacaattgaa 204  Q
     |||||||| | ||||||||||||||||| || |  |||||||| ||||||||||||||||||||  ||||||||    
T  22583527 gatcattattgacttcaacatacgccctttcactacagggactttaaaagttacagaagaaccttggcaattgaa 22583601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 67; Significance: 6e-30; HSPs: 7)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 19 - 195
Target Start/End: Complemental strand, 4362718 - 4362545
Alignment:
Q  19 taacgcctctatcttatagagctgaatggtggcctttgtgtaatttttcaccaacaaatttgtgaggccatcagatgctatgttatccgtggttgaagaa 118  Q
    |||||||||| |||||||||| |||||||||| |||||||| |||| ||||||||| |||| | |||||||| |||| ||||| ||  | | ||||||||    
T  4362718 taacgcctctctcttatagagttgaatggtggtctttgtgtgatttatcaccaacacatttctaaggccatctgatgttatgtcatatgggcttgaagaa 4362619  T
Q  119 tagataatgcatatcattatcgtcttcaacatacgcccttccatttgagggacttcaaaagttacagaagaaccttt 195  Q
    |||| ||||||   |||||| ||||||||  |||  ||||||| |||||||||||||||| |||||||| |||||||    
T  4362618 tagacaatgca---cattattgtcttcaagctacatccttccacttgagggacttcaaaaattacagaataaccttt 4362545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 9 - 194
Target Start/End: Original strand, 4319421 - 4319603
Alignment:
Q  9 caaaggagattaacgcctctatcttatagagctgaatggtggcctttgtgtaatttttcaccaacaaatttgtgaggccatcagatgctatgttatccgt 108  Q
    ||||||||  ||| || ||| |||||||||| |||||||||| |||||||| |||| |||| |||| ||||   |||||||| |||| |||||  |  |     
T  4319421 caaaggaggataatgcttctctcttatagagttgaatggtggtctttgtgtgatttatcactaacacattttcaaggccatctgatgttatgtcgtatgg 4319520  T
Q  109 ggttgaagaatagataatgcatatcattatcgtcttcaacatacgcccttccatttgagggacttcaaaagttacagaagaacctt 194  Q
    | |||||||||||| ||||||   |||||| ||||||||  |||| ||||||| |||||||||||||||| |||||||||||||||    
T  4319521 gcttgaagaatagacaatgca---cattattgtcttcaagctacgtccttccacttgagggacttcaaaaattacagaagaacctt 4319603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 23 - 195
Target Start/End: Complemental strand, 4337064 - 4336895
Alignment:
Q  23 gcctctatcttatagagctgaatggtggcctttgtgtaatttttcaccaacaaatttgtgaggccatcagatgctatgttatccgtggttgaagaataga 122  Q
    |||||| ||||| |||| |||||||||| |||||||| |||| ||||||||| ||||   |||||||| |||| ||||| ||  | | ||||||||||||    
T  4337064 gcctctctcttaaagagttgaatggtggtctttgtgtgatttatcaccaacacattttgaaggccatctgatgttatgtcatttgggcttgaagaataga 4336965  T
Q  123 taatgcatatcattatcgtcttcaacatacgcccttccatttgagggacttcaaaagttacagaagaaccttt 195  Q
     |||||| ||||||   ||||||||  |||| |||||||  ||||||||||||||| |||||||| |||||||    
T  4336964 caatgcacatcatt---gtcttcaagctacgtccttccacatgagggacttcaaaatttacagaataaccttt 4336895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 19 - 195
Target Start/End: Original strand, 4122773 - 4122946
Alignment:
Q  19 taacgcctctatcttatagagctgaatggtggcctttgtgtaatttttcaccaacaaatttgtgaggccatcagatgctatgttatccgtggttgaagaa 118  Q
    |||||||||| |||||||||| |||||||||| |||||||| |||| ||||||||| ||||   |||||| | |||||||||  ||  | | |||| |||    
T  4122773 taacgcctctctcttatagagttgaatggtggtctttgtgtgatttatcaccaacacattttgaaggccaactgatgctatgccatttgggcttgatgaa 4122872  T
Q  119 tagataatgcatatcattatcgtcttcaacatacgcccttccatttgagggacttcaaaagttacagaagaaccttt 195  Q
    |||| |||||| ||||||   ||||||||  |||| ||||||| ||||||||||||||||   |||||| |||||||    
T  4122873 tagacaatgcacatcatt---gtcttcaagctacgtccttccacttgagggacttcaaaaacaacagaataaccttt 4122946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 19 - 209
Target Start/End: Complemental strand, 4346529 - 4346335
Alignment:
Q  19 taacgcctctatcttatagagctgaatggtggcctttgtgtaatttttcaccaacaaatttgtgaggccatcagatgc-------tatgttatccgtggt 111  Q
    |||||||||| |||||||||| |||||||||| |||||||| |||| ||||||||| |||| | |||||||| ||||        ||||| ||| | | |    
T  4346529 taacgcctctctcttatagagttgaatggtggtctttgtgtgatttatcaccaacacatttttaaggccatctgatgtctgatgttatgtcatctgggct 4346430  T
Q  112 tgaagaatagataatgcatatcattatcgtcttcaacatacgcccttccatttgagggacttcaaaagttacagaagaacctttacaattgaaagttg 209  Q
    ||||||||||| ||||||   |||||| ||||||||  || | ||||||| |||||||||||||||  |||||||| |||||||  | ||||||||||    
T  4346429 tgaagaatagacaatgca---cattattgtcttcaagctatgtccttccacttgagggacttcaaagattacagaataacctttggagttgaaagttg 4346335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 23 - 90
Target Start/End: Original strand, 4132748 - 4132815
Alignment:
Q  23 gcctctatcttatagagctgaatggtggcctttgtgtaatttttcaccaacaaatttgtgaggccatc 90  Q
    |||||| ||||||||||||||||||| | ||| |||| |||| ||||||||| |||| | ||||||||    
T  4132748 gcctctctcttatagagctgaatggtagtcttcgtgtgatttatcaccaacacattttttaggccatc 4132815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 9 - 71
Target Start/End: Complemental strand, 25569016 - 25568954
Alignment:
Q  9 caaaggagattaacgcctctatcttatagagctgaatggtggcctttgtgtaatttttcacca 71  Q
    ||||||| | ||| |||||| |||| |||| ||||||||||| ||| ||||||||||||||||    
T  25569016 caaaggaaactaatgcctctctcttgtagacctgaatggtggacttggtgtaatttttcacca 25568954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 54; Significance: 3e-22; HSPs: 2)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 9 - 204
Target Start/End: Original strand, 36213040 - 36213232
Alignment:
Q  9 caaaggagattaacgcctctatcttatagagctgaatggtggcctttgtgtaatttttcaccaacaaatttgtgaggccatcagatgctatgttatccgt 108  Q
    |||| |||| ||| |||||| ||||||||| ||||||||| |||||||||| |||||| |||| ||  ||| | || ||||| ||||||||||| || |     
T  36213040 caaatgagactaatgcctctctcttatagatctgaatggtagcctttgtgtgattttttaccatcacgtttttaagtccatctgatgctatgttttctgg 36213139  T
Q  109 ggttgaagaatagataatgcatatcattatcgtcttcaacatacgcccttccatttgagggacttcaaaagttacagaagaacctttacaattgaa 204  Q
     ||||||||||||| ||| ||   |||||| ||||| ||  |||| || |||| | ||||||| |||||| |||||||||||||||| ||||||||    
T  36213140 agttgaagaatagacaataca---cattattgtctttaagttacgtccatccactcgagggacatcaaaaattacagaagaacctttgcaattgaa 36213232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 30 - 76
Target Start/End: Complemental strand, 18936612 - 18936566
Alignment:
Q  30 tcttatagagctgaatggtggcctttgtgtaatttttcaccaacaaa 76  Q
    ||||||||||||||||||||  ||||||| ||||| |||||||||||    
T  18936612 tcttatagagctgaatggtgttctttgtgcaatttatcaccaacaaa 18936566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 52; Significance: 5e-21; HSPs: 4)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 9 - 194
Target Start/End: Original strand, 47985512 - 47985694
Alignment:
Q  9 caaaggagattaacgcctctatcttatagagctgaatggtggcctttgtgtaatttttcaccaacaaatttgtgaggccatcagatgctatgttatccgt 108  Q
    ||||||||||||| | |||  |||||||||| |||||| ||||  |||||| |||| |||| ||||  ||| | |||||||| |||| ||||| ||| |     
T  47985512 caaaggagattaatgtctcactcttatagagttgaatgatggctcttgtgtgatttatcactaacacgtttttaaggccatctgatgttatgtcatctga 47985611  T
Q  109 ggttgaagaatagataatgcatatcattatcgtcttcaacatacgcccttccatttgagggacttcaaaagttacagaagaacctt 194  Q
    |||||||| ||||| |||||| ||||||   ||||| ||  || ||| ||||| ||||||||||||||||||||| ||||||||||    
T  47985612 ggttgaagtatagacaatgcacatcatt---gtctttaagttatgcctttccacttgagggacttcaaaagttaccgaagaacctt 47985694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 9 - 194
Target Start/End: Original strand, 47994799 - 47994981
Alignment:
Q  9 caaaggagattaacgcctctatcttatagagctgaatggtggcctttgtgtaatttttcaccaacaaatttgtgaggccatcagatgctatgttatccgt 108  Q
    ||||||||||||| | |||  |||||||||| |||||| ||||  |||||| |||| |||| ||||  ||| | |||||||| |||| ||||| ||| |     
T  47994799 caaaggagattaatgtctcactcttatagagttgaatgatggctcttgtgtgatttatcactaacacgtttttaaggccatctgatgttatgtcatctga 47994898  T
Q  109 ggttgaagaatagataatgcatatcattatcgtcttcaacatacgcccttccatttgagggacttcaaaagttacagaagaacctt 194  Q
    |||||||| ||||| |||||| ||||||   ||||| ||  || ||| ||||| ||||||||||||||||||||| ||||||||||    
T  47994899 ggttgaagtatagacaatgcacatcatt---gtctttaagttatgcctttccacttgagggacttcaaaagttaccgaagaacctt 47994981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 9 - 194
Target Start/End: Original strand, 48004086 - 48004268
Alignment:
Q  9 caaaggagattaacgcctctatcttatagagctgaatggtggcctttgtgtaatttttcaccaacaaatttgtgaggccatcagatgctatgttatccgt 108  Q
    ||||||||||||| | |||  |||||||||| |||||| ||||  |||||| |||| |||| ||||  ||| | |||||||| |||| ||||| ||| |     
T  48004086 caaaggagattaatgtctcactcttatagagttgaatgatggctcttgtgtgatttatcactaacacgtttttaaggccatctgatgttatgtcatctga 48004185  T
Q  109 ggttgaagaatagataatgcatatcattatcgtcttcaacatacgcccttccatttgagggacttcaaaagttacagaagaacctt 194  Q
    |||||||| ||||| |||||| ||||||   ||||| ||  || ||| ||||| ||||||||||||||||||||| ||||||||||    
T  48004186 ggttgaagtatagacaatgcacatcatt---gtctttaagttatgcctttccacttgagggacttcaaaagttaccgaagaacctt 48004268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 9 - 194
Target Start/End: Original strand, 48013371 - 48013553
Alignment:
Q  9 caaaggagattaacgcctctatcttatagagctgaatggtggcctttgtgtaatttttcaccaacaaatttgtgaggccatcagatgctatgttatccgt 108  Q
    ||||||||||||| | |||  |||||||||| |||||| ||||  |||||| |||| |||| ||||  ||| | |||||||| |||| ||||| ||| |     
T  48013371 caaaggagattaatgtctcactcttatagagttgaatgatggctcttgtgtgatttatcactaacacgtttttaaggccatctgatgttatgtcatctga 48013470  T
Q  109 ggttgaagaatagataatgcatatcattatcgtcttcaacatacgcccttccatttgagggacttcaaaagttacagaagaacctt 194  Q
    |||||||| ||||| |||||| ||||||   ||||| ||  || ||| ||||| ||||||||||||||||||||| ||||||||||    
T  48013471 ggttgaagtatagacaatgcacatcatt---gtctttaagttatgcctttccacttgagggacttcaaaagttaccgaagaacctt 48013553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0294 (Bit Score: 44; Significance: 3e-16; HSPs: 1)
Name: scaffold0294
Description:

Target: scaffold0294; HSP #1
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 30 - 117
Target Start/End: Original strand, 8017 - 8104
Alignment:
Q  30 tcttatagagctgaatggtggcctttgtgtaatttttcaccaacaaatttgtgaggccatcagatgctatgttatccgtggttgaaga 117  Q
    ||||||||| |||||||||||||||||||||||||||||| |||| |||| | || ||||| | || |||||||||||  ||||||||    
T  8017 tcttatagatctgaatggtggcctttgtgtaatttttcactaacacatttttaagaccatctggtgttatgttatccgcagttgaaga 8104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University