View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5905_high_22 (Length: 305)
Name: NF5905_high_22
Description: NF5905
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5905_high_22 |
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Alignment Details
Target: chr5 (Bit Score: 268; Significance: 1e-149; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 268; E-Value: 1e-149
Query Start/End: Original strand, 17 - 300
Target Start/End: Complemental strand, 11024600 - 11024317
Alignment:
| Q |
17 |
aagattttaggcagaagagctcttagctgccttccaaaattaagtgcaatgtcatatagttgaagggtgttaaatggagtttggtaaatgtatgttgctg |
116 |
Q |
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| T |
11024600 |
aagattttaggcagaagagctcttagctgccttccaaaattaagtgcaatgtcatatagttgaagggtgttaaatggagtttggtaaatgtatgttgctg |
11024501 |
T |
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| Q |
117 |
tttatatttggtagattcttctcatcaaagccatctttcacaaacaaacagtgatgtagggaacgtatcacggattgtaaaatcctatgactgatcgtaa |
216 |
Q |
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|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |
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| T |
11024500 |
tttatatttggtaggttcttctcatcaaagccatctttcacaaacaaacagtgatgtagggaacgtatcacggatcgtaaaatcctatgactgatcgtac |
11024401 |
T |
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| Q |
217 |
aatttcaagtttaaccacctttctagggacatccaaacagagagaacagggaataaagaaacataattataaagtattatctac |
300 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |
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| T |
11024400 |
aatttcaagtttaaccacctttctagggacatccaaacagagagaacagggaataaagaaacataattataaagtattaactac |
11024317 |
T |
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