View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF5905_low_35 (Length: 224)

Name: NF5905_low_35
Description: NF5905
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF5905_low_35
NF5905_low_35
[»] chr6 (31 HSPs)
chr6 (4-203)||(5065568-5065767)
chr6 (4-177)||(5253526-5253699)
chr6 (4-189)||(5346006-5346191)
chr6 (18-189)||(5126762-5126933)
chr6 (18-203)||(5100937-5101119)
chr6 (18-189)||(5242645-5242816)
chr6 (18-182)||(5136059-5136220)
chr6 (18-182)||(5439005-5439166)
chr6 (8-203)||(5177720-5177915)
chr6 (8-203)||(5279545-5279740)
chr6 (8-203)||(5689022-5689217)
chr6 (20-203)||(5398042-5398222)
chr6 (18-203)||(5352982-5353164)
chr6 (18-182)||(5448603-5448764)
chr6 (18-182)||(5156153-5156314)
chr6 (35-201)||(5072803-5072966)
chr6 (22-203)||(5351398-5351576)
chr6 (18-203)||(5372091-5372273)
chr6 (18-203)||(5098205-5098387)
chr6 (18-182)||(5334173-5334333)
chr6 (18-187)||(23127445-23127611)
chr6 (144-201)||(2939028-2939085)
chr6 (110-182)||(5124583-5124655)
chr6 (146-182)||(5180914-5180950)
chr6 (18-103)||(5283431-5283513)
chr6 (138-180)||(5256253-5256295)
chr6 (138-180)||(5283363-5283405)
chr6 (144-182)||(5427017-5427055)
chr6 (18-46)||(5181047-5181075)
chr6 (18-62)||(5256407-5256451)
chr6 (18-62)||(5426894-5426938)
[»] chr2 (1 HSPs)
chr2 (8-182)||(22583427-22583601)
[»] chr4 (7 HSPs)
chr4 (17-193)||(4362545-4362718)
chr4 (18-203)||(4319421-4319603)
chr4 (17-189)||(4336895-4337064)
chr4 (17-193)||(4122773-4122946)
chr4 (3-193)||(4346335-4346529)
chr4 (122-189)||(4132748-4132815)
chr4 (141-203)||(25568954-25569016)
[»] chr7 (2 HSPs)
chr7 (8-203)||(36213040-36213232)
chr7 (136-182)||(18936566-18936612)
[»] chr3 (4 HSPs)
chr3 (18-203)||(47985512-47985694)
chr3 (18-203)||(47994799-47994981)
chr3 (18-203)||(48004086-48004268)
chr3 (18-203)||(48013371-48013553)
[»] scaffold0294 (1 HSPs)
scaffold0294 (95-182)||(8017-8104)


Alignment Details
Target: chr6 (Bit Score: 156; Significance: 5e-83; HSPs: 31)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 156; E-Value: 5e-83
Query Start/End: Original strand, 4 - 203
Target Start/End: Complemental strand, 5065767 - 5065568
Alignment:
Q  4 aactttcaattgtaaaggttcttctgtaacttttgaagtccctcaaatggaagggcgtatgttgaagacgataatgatatgcattatctattcttcaacc 103  Q
    ||||| ||||||  ||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||| ||||||||||||||    
T  5065767 aacttacaattgcgaaggttcttctgtaacttttgaagtccctcaaatgaaagggcgtatgttgaagacaataatgatatgcattgtctattcttcaacc 5065668  T
Q  104 acggataacatagcatctgatggcctcacaaatttgttggtgaaaaattacacaaaggccaccattcagctctataagatagaggcgttaatctcctttg 203  Q
     |||||||||||||||||||||||||||||||||||||||| ||||||||||||||  ||||||||||||||||||||| ||||||||||||||||||||    
T  5065667 ccggataacatagcatctgatggcctcacaaatttgttggtaaaaaattacacaaaatccaccattcagctctataagagagaggcgttaatctcctttg 5065568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 4 - 177
Target Start/End: Original strand, 5253526 - 5253699
Alignment:
Q  4 aactttcaattgtaaaggttcttctgtaacttttgaagtccctcaaatggaagggcgtatgttgaagacgataatgatatgcattatctattcttcaacc 103  Q
    ||||||||||||| |||||||||||||| ||||| ||||||||||| |||||||||||||||||||||| |||| |||| ||||| |||| |||||||||    
T  5253526 aactttcaattgtgaaggttcttctgtaccttttaaagtccctcaattggaagggcgtatgttgaagacaataaagataagcattgtctaatcttcaacc 5253625  T
Q  104 acggataacatagcatctgatggcctcacaaatttgttggtgaaaaattacacaaaggccaccattcagctcta 177  Q
     | ||||||| | ||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||    
T  5253626 ccagataacacaacatctgatggcttcacaaatttgttggtaaaaaattacacaaaggccaccattcagctcta 5253699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 4 - 189
Target Start/End: Original strand, 5346006 - 5346191
Alignment:
Q  4 aactttcaattgtaaaggttcttctgtaacttttgaagtccctcaaatggaagggcgtatgttgaagacgataatgatatgcattatctattcttcaacc 103  Q
    ||||||||||| | ||||||||||||| ||||||||||| |||||| |||||||||| ||||||||||| |||| ||||||  || |||||||||||||     
T  5346006 aactttcaattctgaaggttcttctgttacttttgaagttcctcaagtggaagggcgaatgttgaagacaataacgatatgtgttgtctattcttcaact 5346105  T
Q  104 acggataacatagcatctgatggcctcacaaatttgttggtgaaaaattacacaaaggccaccattcagctctataagatagaggc 189  Q
     ||||||| ||| ||||||||||||| | ||| |||||||||||||||||||||||||| ||||||||||| || |||| ||||||    
T  5346106 tcggataatataacatctgatggcctgagaaacttgttggtgaaaaattacacaaaggctaccattcagctatacaagagagaggc 5346191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 18 - 189
Target Start/End: Complemental strand, 5126933 - 5126762
Alignment:
Q  18 aaggttcttctgtaacttttgaagtccctcaaatggaagggcgtatgttgaagacgataatgatatgcattatctattcttcaaccacggataacatagc 117  Q
    |||||||||| |||||||||||||| |||||| || ||||||||| ||||||||   |||||||||||||| ||||||||||||||  |||||||||| |    
T  5126933 aaggttcttcggtaacttttgaagtacctcaagtgaaagggcgtacgttgaagaaagtaatgatatgcattgtctattcttcaaccttggataacataac 5126834  T
Q  118 atctgatggcctcacaaatttgttggtgaaaaattacacaaaggccaccattcagctctataagatagaggc 189  Q
    ||| |||||||| ||||  |||||||||||||||||||| |||||||||||||| |||||||||| ||||||    
T  5126833 atcagatggccttacaagcttgttggtgaaaaattacacgaaggccaccattcaactctataagagagaggc 5126762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 18 - 203
Target Start/End: Complemental strand, 5101119 - 5100937
Alignment:
Q  18 aaggttcttctgtaacttttgaagtccctcaaatggaagggcgtatgttgaagacgataatgatatgcattatctattcttcaaccacggataacatagc 117  Q
    ||||||||||||||||||| |||||||||||| ||||||||||||  ||||||||   |||||| |||||| ||||| |||||||| | ||||||||| |    
T  5101119 aaggttcttctgtaactttagaagtccctcaagtggaagggcgtaacttgaagac---aatgatgtgcattgtctatacttcaaccccagataacataac 5101023  T
Q  118 atctgatggcctcacaaatttgttggtgaaaaattacacaaaggccaccattcagctctataagatagaggcgttaatctcctttg 203  Q
    |||   |||||| | |||| |||| ||||||||||||||||||||||||||||||||||||||||  ||||| ||| |||||||||    
T  5101022 atcaagtggccttaaaaatgtgttagtgaaaaattacacaaaggccaccattcagctctataagagcgaggcattagtctcctttg 5100937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 18 - 189
Target Start/End: Complemental strand, 5242816 - 5242645
Alignment:
Q  18 aaggttcttctgtaacttttgaagtccctcaaatggaagggcgtatgttgaagacgataatgatatgcattatctattcttcaaccacggataacatagc 117  Q
    ||||||||||||| |||||||||||||||||| |||||||||| ||||||||||| |||| ||||||   | |||||||||||||  ||||||  ||| |    
T  5242816 aaggttcttctgttacttttgaagtccctcaagtggaagggcgaatgttgaagacaataacgatatgtgctgtctattcttcaacttcggatagtataac 5242717  T
Q  118 atctgatggcctcacaaatttgttggtgaaaaattacacaaaggccaccattcagctctataagatagaggc 189  Q
    ||||||||||||   ||| ||||| ||||||||||||||||||||||||||||||||||| |||| ||||||    
T  5242716 atctgatggccttggaaacttgttagtgaaaaattacacaaaggccaccattcagctctacaagagagaggc 5242645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 18 - 182
Target Start/End: Complemental strand, 5136220 - 5136059
Alignment:
Q  18 aaggttcttctgtaacttttgaagtccctcaaatggaagggcgtatgttgaagacgataatgatatgcattatctattcttcaaccacggataacatagc 117  Q
    ||||||||||||||||||| |||||||||||| ||||||||||||  ||||||||   |||||| |||||| ||||| |||||||| | ||||||||| |    
T  5136220 aaggttcttctgtaactttagaagtccctcaagtggaagggcgtaacttgaagac---aatgatgtgcattgtctatacttcaaccccagataacataac 5136124  T
Q  118 atctgatggcctcacaaatttgttggtgaaaaattacacaaaggccaccattcagctctataaga 182  Q
    |||   |||||| | |||| ||||||| |||||||||||||||||||||||||||||||| ||||    
T  5136123 atcaagtggccttaaaaatgtgttggtaaaaaattacacaaaggccaccattcagctctacaaga 5136059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 18 - 182
Target Start/End: Original strand, 5439005 - 5439166
Alignment:
Q  18 aaggttcttctgtaacttttgaagtccctcaaatggaagggcgtatgttgaagacgataatgatatgcattatctattcttcaaccacggataacatagc 117  Q
    |||||||||||||||||||| ||||||||||| ||||||||||||  |||| | |   | |||| |||||| |||||||||||||  ||||||||||| |    
T  5439005 aaggttcttctgtaacttttcaagtccctcaagtggaagggcgtaatttgatgtc---attgatgtgcattgtctattcttcaactccggataacataac 5439101  T
Q  118 atctgatggcctcacaaatttgttggtgaaaaattacacaaaggccaccattcagctctataaga 182  Q
    ||| ||| |||| | |||| | ||||||| |||| ||||||||||||||||||||||||||||||    
T  5439102 atcagatagccttataaatgtattggtgataaatcacacaaaggccaccattcagctctataaga 5439166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 8 - 203
Target Start/End: Original strand, 5177720 - 5177915
Alignment:
Q  8 ttcaattgtaaaggttcttctgtaacttttgaagtccctcaaatggaagggcgtatgttgaagacgataatgatatgcattatctattcttcaaccacgg 107  Q
    ||||||||  |||||||||| ||||  ||||||||||||||| |||||||| | |  || ||||| || ||||||||||||  |||||||||||||  ||    
T  5177720 ttcaattgcgaaggttcttcggtaatgtttgaagtccctcaagtggaagggtgcactttaaagacaatgatgatatgcattgactattcttcaaccctgg 5177819  T
Q  108 ataacatagcatctgatggcctcacaaatttgttggtgaaaaattacacaaaggccaccattcagctctataagatagaggcgttaatctcctttg 203  Q
    |||| ||| ||||  |||||||  |||| |||||||| || ||||||||||| |||||||||||||| ||||||| |||||| |||  ||||||||    
T  5177820 ataatataacatcaaatggccttgcaaacttgttggttaagaattacacaaaagccaccattcagctttataagagagaggcattagcctcctttg 5177915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 8 - 203
Target Start/End: Original strand, 5279545 - 5279740
Alignment:
Q  8 ttcaattgtaaaggttcttctgtaacttttgaagtccctcaaatggaagggcgtatgttgaagacgataatgatatgcattatctattcttcaaccacgg 107  Q
    ||||||||  |||||||||| ||||  ||||||||||||||| |||||||| | |  || |||||  | ||||||||||||  |||||||||||||  ||    
T  5279545 ttcaattgcgaaggttcttcggtaatgtttgaagtccctcaagtggaagggtgcactttaaagacattgatgatatgcattgactattcttcaaccctgg 5279644  T
Q  108 ataacatagcatctgatggcctcacaaatttgttggtgaaaaattacacaaaggccaccattcagctctataagatagaggcgttaatctcctttg 203  Q
    |||| ||| ||||  |||||||  |||| ||||||||||| ||||||||||| |||||||||||||| ||||||| |||||| |||  ||||||||    
T  5279645 ataatataacatcaaatggccttgcaaacttgttggtgaagaattacacaaaagccaccattcagctttataagagagaggcattagcctcctttg 5279740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 8 - 203
Target Start/End: Complemental strand, 5689217 - 5689022
Alignment:
Q  8 ttcaattgtaaaggttcttctgtaacttttgaagtccctcaaatggaagggcgtatgttgaagacgataatgatatgcattatctattcttcaaccacgg 107  Q
    ||||||||  |||||||||| ||||  ||||||||||||||| |||||||||| |  || |||||  | |||||||||||   ||||||| |||||  ||    
T  5689217 ttcaattgcgaaggttcttcggtaatgtttgaagtccctcaagtggaagggcgcactttaaagacattgatgatatgcatcgactattctacaaccctgg 5689118  T
Q  108 ataacatagcatctgatggcctcacaaatttgttggtgaaaaattacacaaaggccaccattcagctctataagatagaggcgttaatctcctttg 203  Q
    |||||||| ||||  |||||||  |||| ||||||||||| ||||||||||| |||||||||||||| |||||||  ||||| ||| |||||||||    
T  5689117 ataacataacatcaaatggccttgcaaacttgttggtgaagaattacacaaaagccaccattcagctttataagagcgaggcattagtctcctttg 5689022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 20 - 203
Target Start/End: Original strand, 5398042 - 5398222
Alignment:
Q  20 ggttcttctgtaacttttgaagtccctcaaatggaagggcgtatgttgaagacgataatgatatgcattatctattcttcaaccacggataacatagcat 119  Q
    ||||||||| ||||||||||||| |||||  ||||||||||||  ||||||||   |||||| |||||| | ||| |||||||   ||||||  || |||    
T  5398042 ggttcttctttaacttttgaagttcctcatgtggaagggcgtaacttgaagac---aatgatgtgcattgtgtatacttcaactctggataatgtaacat 5398138  T
Q  120 ctgatggcctcacaaatttgttggtgaaaaattacacaaaggccaccattcagctctataagatagaggcgttaatctcctttg 203  Q
    ||  |||||| | |||  |||| |||| |||||||||||||||||||||||||||||||||||  ||||||||| |||||||||    
T  5398139 ctagtggccttaaaaacatgttagtgataaattacacaaaggccaccattcagctctataagagtgaggcgttattctcctttg 5398222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 18 - 203
Target Start/End: Complemental strand, 5353164 - 5352982
Alignment:
Q  18 aaggttcttctgtaacttttgaagtccctcaaatggaagggcgtatgttgaagacgataatgatatgcattatctattcttcaaccacggataacatagc 117  Q
    |||||||||||||||||||| | |||||||   ||||||||||||  ||||||||   |||||| |||||||||||| | ||||||    |||||||| |    
T  5353164 aaggttcttctgtaacttttcatgtccctctggtggaagggcgtaacttgaagac---aatgatgtgcattatctatacgtcaacccaaaataacataac 5353068  T
Q  118 atctgatggcctcacaaatttgttggtgaaaaattacacaaaggccaccattcagctctataagatagaggcgttaatctcctttg 203  Q
     ||  ||||||| | |||| ||||| | ||||||||||||||||| ||||||||||| ||||||| |||||| ||||| |||||||    
T  5353067 ttcatatggccttaaaaatgtgttgctaaaaaattacacaaaggctaccattcagctttataagagagaggcattaatttcctttg 5352982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 18 - 182
Target Start/End: Original strand, 5448603 - 5448764
Alignment:
Q  18 aaggttcttctgtaacttttgaagtccctcaaatggaagggcgtatgttgaagacgataatgatatgcattatctattcttcaaccacggataacatagc 117  Q
    |||||||||||||||||||||||||||||||| |||||| ||||   |||| | |   | |||| |||||| ||||| |||||||| | |||||  || |    
T  5448603 aaggttcttctgtaacttttgaagtccctcaagtggaagagcgtcaattgacgtc---attgatgtgcattgtctatacttcaaccccagataatgtaac 5448699  T
Q  118 atctgatggcctcacaaatttgttggtgaaaaattacacaaaggccaccattcagctctataaga 182  Q
    ||||  |||||| | |||| ||||||||||||||||||||||||| ||||||||  |||||||||    
T  5448700 atctagtggccttaaaaatgtgttggtgaaaaattacacaaaggctaccattcaaatctataaga 5448764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 18 - 182
Target Start/End: Complemental strand, 5156314 - 5156153
Alignment:
Q  18 aaggttcttctgtaacttttgaagtccctcaaatggaagggcgtatgttgaagacgataatgatatgcattatctattcttcaaccacggataacatagc 117  Q
    ||||||||||||| |  |||||||| |||||| ||||||||||||  ||||||||   |||||| |||||| ||||| |||||||| | |||||  || |    
T  5156314 aaggttcttctgtgaaatttgaagttcctcaagtggaagggcgtaacttgaagac---aatgatgtgcattgtctatacttcaaccccagataatgtaac 5156218  T
Q  118 atctgatggcctcacaaatttgttggtgaaaaattacacaaaggccaccattcagctctataaga 182  Q
    || |  |||||| | |||  ||||  ||||||||||||||||||||||||||||||| |||||||    
T  5156217 atgtagtggccttaaaaacatgttattgaaaaattacacaaaggccaccattcagctttataaga 5156153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 35 - 201
Target Start/End: Complemental strand, 5072966 - 5072803
Alignment:
Q  35 tttgaagtccctcaaatggaagggcgtatgttgaagacgataatgatatgcattatctattcttcaaccacggataacatagcatctgatggcctcacaa 134  Q
    ||||||||||||||| |||||||||| || ||||||||   |||||||||| || ||||||||||| |  |  ||||  ||| ||| || ||||| | ||    
T  5072966 tttgaagtccctcaagtggaagggcgcatattgaagac---aatgatatgcgttgtctattcttcaccaccaaataatgtagtatcagacggccttaaaa 5072870  T
Q  135 atttgttggtgaaaaattacacaaaggccaccattcagctctataagatagaggcgttaatctcctt 201  Q
    | ||| |||||||||||||||| || ||||||||||| || ||||||| |||||| ||| |||||||    
T  5072869 acttgatggtgaaaaattacactaaagccaccattcaactatataagagagaggcattagtctcctt 5072803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 22 - 203
Target Start/End: Original strand, 5351398 - 5351576
Alignment:
Q  22 ttcttctgtaacttttgaagtccctcaaatggaagggcgtatgttgaagacgataatgatatgcattatctattcttcaaccacggataacatagcatct 121  Q
    ||||||||| |  |||||||| |||||| |||||||||||   ||||||||   |||||| |||||  ||||| |||||||| | | |||| || ||||     
T  5351398 ttcttctgtgaaatttgaagttcctcaagtggaagggcgtgacttgaagac---aatgatgtgcatagtctatacttcaacccctggtaacgtaacatca 5351494  T
Q  122 gatggcctcacaaatttgttggtgaaaaattacacaaaggccaccattcagctctataagatagaggcgttaatctcctttg 203  Q
      |||||| | |||  |||| |||||||||||||||||||||||||||| |||||||||||  ||||| ||| | |||||||    
T  5351495 agtggccttaaaaacatgttagtgaaaaattacacaaaggccaccattcggctctataagagtgaggcattagtttcctttg 5351576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 18 - 203
Target Start/End: Original strand, 5372091 - 5372273
Alignment:
Q  18 aaggttcttctgtaacttttgaagtccctcaaatggaagggcgtatgttgaagacgataatgatatgcattatctattcttcaaccacggataacatagc 117  Q
    ||||||||||||| |  |||||||| |||||| ||||||||||||  |||||||| || |||   |||| | ||| | |||||||  |||||||  || |    
T  5372091 aaggttcttctgtgaaatttgaagttcctcaagtggaagggcgtaacttgaagacaattatg---tgcaatgtctgtacttcaactccggataatgtaac 5372187  T
Q  118 atctgatggcctcacaaatttgttggtgaaaaattacacaaaggccaccattcagctctataagatagaggcgttaatctcctttg 203  Q
    ||||  |||||| | |||  ||||  ||||||||||||||||||||||||||||||| |||||||  || || ||| |||||||||    
T  5372188 atctagtggccttaaaaacatgttattgaaaaattacacaaaggccaccattcagctttataagagtgaagcattagtctcctttg 5372273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 18 - 203
Target Start/End: Original strand, 5098205 - 5098387
Alignment:
Q  18 aaggttcttctgtaacttttgaagtccctcaaatggaagggcgtatgttgaagacgataatgatatgcattatctattcttcaaccacggataacatagc 117  Q
    |||||||||| ||||||||| |||| || ||| ||||||| ||||  ||||| ||   |||||| |||||| ||||| |||||||| | | ||||||       
T  5098205 aaggttcttcggtaacttttcaagttccccaagtggaaggccgtagcttgaaaac---aatgatgtgcattgtctatacttcaaccccagctaacatgat 5098301  T
Q  118 atctgatggcctcacaaatttgttggtgaaaaattacacaaaggccaccattcagctctataagatagaggcgttaatctcctttg 203  Q
    |||   |||||| | |||  |||| ||||||||  ||||||||||||||||||||||||||||||  ||||| ||  |||||||||    
T  5098302 atcaagtggccttaaaaacatgttagtgaaaaaccacacaaaggccaccattcagctctataagagtgaggcattggtctcctttg 5098387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 18 - 182
Target Start/End: Original strand, 5334173 - 5334333
Alignment:
Q  18 aaggttcttctgtaacttttgaagtccctcaaatggaagggcgtatgttgaagacgataatgatatgcattatctattcttcaaccacggataacatagc 117  Q
    ||||||||||||| |  |||||||| |||||| |||||||| |||  ||||||||   |||||| |||||| |||||  ||||||| | |||||  || |    
T  5334173 aaggttcttctgtgaaatttgaagttcctcaagtggaagggggtaacttgaagac---aatgatgtgcattttctataattcaaccccagataatgta-c 5334268  T
Q  118 atctgatggcctcacaaatttgttggtgaaaaattacacaaaggccaccattcagctctataaga 182  Q
    |||   |||||| | |||  |||| |||| |||||||||||||||||||||||| ||||||||||    
T  5334269 atcaagtggccttaaaaacatgttagtgataaattacacaaaggccaccattcaactctataaga 5334333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 18 - 187
Target Start/End: Complemental strand, 23127611 - 23127445
Alignment:
Q  18 aaggttcttctgtaacttttgaagtccctcaaatggaagggcgtatgttgaagacgataatgatatgcattatctattcttcaaccacggataacatagc 117  Q
    ||||||||||||||| ||||||||  |||||| ||||||||| ||   ||||||| ||||||   ||  || || || |||||||| | ||||||||  |    
T  23127611 aaggttcttctgtaagttttgaagctcctcaagtggaagggcataacgtgaagacaataatg---tgtgttgtcaatacttcaaccccagataacattac 23127515  T
Q  118 atctgatggcctcacaaatttgttggtgaaaaattacacaaaggccaccattcagctctataagatagag 187  Q
     || |||||| | | |||  ||||||| ||||||||||||||||  ||||||||| ||||||||| ||||    
T  23127514 ctcggatggcgttaaaaacgtgttggtaaaaaattacacaaagggtaccattcagatctataagagagag 23127445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 144 - 201
Target Start/End: Original strand, 2939028 - 2939085
Alignment:
Q  144 tgaaaaattacacaaaggccaccattcagctctataagatagaggcgttaatctcctt 201  Q
    |||||||||| | ||||||||||||||||||||||||||  ||||| ||| |||||||    
T  2939028 tgaaaaattatataaaggccaccattcagctctataagagtgaggcattagtctcctt 2939085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 110 - 182
Target Start/End: Complemental strand, 5124655 - 5124583
Alignment:
Q  110 aacatagcatctgatggcctcacaaatttgttggtgaaaaattacacaaaggccaccattcagctctataaga 182  Q
    ||||||||||| |||||||| | || | || |||||||||||||||| ||||  |||||||| ||||||||||    
T  5124655 aacatagcatcggatggccttaaaactgtgatggtgaaaaattacacgaaggggaccattcaactctataaga 5124583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 146 - 182
Target Start/End: Complemental strand, 5180950 - 5180914
Alignment:
Q  146 aaaaattacacaaaggccaccattcagctctataaga 182  Q
    ||||||||||||||||| |||||||||||||||||||    
T  5180950 aaaaattacacaaaggctaccattcagctctataaga 5180914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 18 - 103
Target Start/End: Complemental strand, 5283513 - 5283431
Alignment:
Q  18 aaggttcttctgtaacttttgaagtccctcaaatggaagggcgtatgttgaagacgataatgatatgcattatctattcttcaacc 103  Q
    |||||||||||||||||||||| ||||||||| | |||||| |||  |||||| |   |||||| |||||| ||||| ||||||||    
T  5283513 aaggttcttctgtaacttttgatgtccctcaagttgaagggtgtaacttgaagtc---aatgatgtgcattgtctatacttcaacc 5283431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 138 - 180
Target Start/End: Complemental strand, 5256295 - 5256253
Alignment:
Q  138 tgttggtgaaaaattacacaaaggccaccattcagctctataa 180  Q
    |||| |||||||||||||||||||||||||| || ||||||||    
T  5256295 tgttagtgaaaaattacacaaaggccaccatccaactctataa 5256253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 138 - 180
Target Start/End: Complemental strand, 5283405 - 5283363
Alignment:
Q  138 tgttggtgaaaaattacacaaaggccaccattcagctctataa 180  Q
    |||| |||||||||||||||||||||||||| || ||||||||    
T  5283405 tgttagtgaaaaattacacaaaggccaccatccaactctataa 5283363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 144 - 182
Target Start/End: Original strand, 5427017 - 5427055
Alignment:
Q  144 tgaaaaattacacaaaggccaccattcagctctataaga 182  Q
    ||||||||||||||||||||| ||||||||| |||||||    
T  5427017 tgaaaaattacacaaaggccatcattcagctttataaga 5427055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 18 - 46
Target Start/End: Complemental strand, 5181075 - 5181047
Alignment:
Q  18 aaggttcttctgtaacttttgaagtccct 46  Q
    |||||||||||||||||||||||||||||    
T  5181075 aaggttcttctgtaacttttgaagtccct 5181047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 18 - 62
Target Start/End: Complemental strand, 5256451 - 5256407
Alignment:
Q  18 aaggttcttctgtaacttttgaagtccctcaaatggaagggcgta 62  Q
    ||||||||||||||||||||||||||||  || | ||||||||||    
T  5256451 aaggttcttctgtaacttttgaagtccccgaagttgaagggcgta 5256407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 18 - 62
Target Start/End: Original strand, 5426894 - 5426938
Alignment:
Q  18 aaggttcttctgtaacttttgaagtccctcaaatggaagggcgta 62  Q
    |||||||||||||||||||| |||| || ||| ||||||||||||    
T  5426894 aaggttcttctgtaacttttcaagttccacaagtggaagggcgta 5426938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 79; Significance: 4e-37; HSPs: 1)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 8 - 182
Target Start/End: Complemental strand, 22583601 - 22583427
Alignment:
Q  8 ttcaattgtaaaggttcttctgtaacttttgaagtccctcaaatggaagggcgtatgttgaagacgataatgatatgcattatctattcttcaaccacgg 107  Q
    ||||||||  |||||||||||||||||||| ||||||||  | || ||||||||||||||||| | |||||||| |||||| |||||||||||||| |||    
T  22583601 ttcaattgccaaggttcttctgtaacttttaaagtccctgtagtgaaagggcgtatgttgaagtcaataatgatctgcattgtctattcttcaaccccgg 22583502  T
Q  108 ataacatagcatctgatggcctcacaaatttgttggtgaaaaattacacaaaggccaccattcagctctataaga 182  Q
    ||||||||  ||| |||||||  |||   ||||||||||||||| | |||||||||||||||||| |||| ||||    
T  22583501 ataacataagatccgatggccctacagccttgttggtgaaaaatcatacaaaggccaccattcagttctacaaga 22583427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 67; Significance: 6e-30; HSPs: 7)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 17 - 193
Target Start/End: Original strand, 4362545 - 4362718
Alignment:
Q  17 aaaggttcttctgtaacttttgaagtccctcaaatggaagggcgtatgttgaagacgataatgatatgcattatctattcttcaaccacggataacatag 116  Q
    ||||||| |||||||| |||||||||||||||| |||||||  |||  |||||||| ||||||   |||||| |||||||||||| | |  || |||||     
T  4362545 aaaggttattctgtaatttttgaagtccctcaagtggaaggatgtagcttgaagacaataatg---tgcattgtctattcttcaagcccatatgacataa 4362641  T
Q  117 catctgatggcctcacaaatttgttggtgaaaaattacacaaaggccaccattcagctctataagatagaggcgtta 193  Q
    |||| |||||||| | |||| ||||||||| |||| |||||||| |||||||||| |||||||||| ||||||||||    
T  4362642 catcagatggccttagaaatgtgttggtgataaatcacacaaagaccaccattcaactctataagagagaggcgtta 4362718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 18 - 203
Target Start/End: Complemental strand, 4319603 - 4319421
Alignment:
Q  18 aaggttcttctgtaacttttgaagtccctcaaatggaagggcgtatgttgaagacgataatgatatgcattatctattcttcaaccacggataacatagc 117  Q
    ||||||||||||||| |||||||||||||||| ||||||| ||||  |||||||| ||||||   |||||| |||||||||||| | |  |  ||||| |    
T  4319603 aaggttcttctgtaatttttgaagtccctcaagtggaaggacgtagcttgaagacaataatg---tgcattgtctattcttcaagcccatacgacataac 4319507  T
Q  118 atctgatggcctcacaaatttgttggtgaaaaattacacaaaggccaccattcagctctataagatagaggcgttaatctcctttg 203  Q
    ||| ||||||||   |||| |||| |||| |||| |||||||| |||||||||| |||||||||| ||| || |||  ||||||||    
T  4319506 atcagatggccttgaaaatgtgttagtgataaatcacacaaagaccaccattcaactctataagagagaagcattatcctcctttg 4319421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 17 - 189
Target Start/End: Original strand, 4336895 - 4337064
Alignment:
Q  17 aaaggttcttctgtaacttttgaagtccctcaaatggaagggcgtatgttgaagacgataatgatatgcattatctattcttcaaccacggataacatag 116  Q
    ||||||| |||||||| |||||||||||||||  ||||||| ||||  ||||||||   |||||| |||||| |||||||||||| | |  || |||||     
T  4336895 aaaggttattctgtaaattttgaagtccctcatgtggaaggacgtagcttgaagac---aatgatgtgcattgtctattcttcaagcccaaatgacataa 4336991  T
Q  117 catctgatggcctcacaaatttgttggtgaaaaattacacaaaggccaccattcagctctataagatagaggc 189  Q
    |||| ||||||||   |||| ||||||||| |||| |||||||| |||||||||| |||| ||||| ||||||    
T  4336992 catcagatggccttcaaaatgtgttggtgataaatcacacaaagaccaccattcaactctttaagagagaggc 4337064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 17 - 193
Target Start/End: Complemental strand, 4122946 - 4122773
Alignment:
Q  17 aaaggttcttctgtaacttttgaagtccctcaaatggaagggcgtatgttgaagacgataatgatatgcattatctattcttcaaccacggataacatag 116  Q
    ||||||| ||||||   |||||||||||||||| ||||||| ||||  ||||||||   |||||| |||||| ||||||| |||| | |  ||  |||||    
T  4122946 aaaggttattctgttgtttttgaagtccctcaagtggaaggacgtagcttgaagac---aatgatgtgcattgtctattcatcaagcccaaatggcatag 4122850  T
Q  117 catctgatggcctcacaaatttgttggtgaaaaattacacaaaggccaccattcagctctataagatagaggcgtta 193  Q
    |||| | ||||||   |||| ||||||||| |||| |||||||| |||||||||| |||||||||| ||||||||||    
T  4122849 catcagttggccttcaaaatgtgttggtgataaatcacacaaagaccaccattcaactctataagagagaggcgtta 4122773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 3 - 193
Target Start/End: Original strand, 4346335 - 4346529
Alignment:
Q  3 caactttcaattgtaaaggttcttctgtaacttttgaagtccctcaaatggaagggcgtatgttgaagacgataatgatatgcattatctattcttcaac 102  Q
    |||||||||| |  ||||||| ||||||||  ||||||||||||||| ||||||| | ||  |||||||| ||||||   |||||| ||||||||||||     
T  4346335 caactttcaactccaaaggttattctgtaatctttgaagtccctcaagtggaaggacatagcttgaagacaataatg---tgcattgtctattcttcaag 4346431  T
Q  103 cacggataacata-------gcatctgatggcctcacaaatttgttggtgaaaaattacacaaaggccaccattcagctctataagatagaggcgtta 193  Q
    | | ||| |||||        |||| |||||||| | |||| ||||||||| |||| |||||||| |||||||||| |||||||||| ||||||||||    
T  4346432 cccagatgacataacatcagacatcagatggccttaaaaatgtgttggtgataaatcacacaaagaccaccattcaactctataagagagaggcgtta 4346529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 122 - 189
Target Start/End: Complemental strand, 4132815 - 4132748
Alignment:
Q  122 gatggcctcacaaatttgttggtgaaaaattacacaaaggccaccattcagctctataagatagaggc 189  Q
    |||||||| | |||| ||||||||| |||| |||| ||| | ||||||||||||||||||| ||||||    
T  4132815 gatggcctaaaaaatgtgttggtgataaatcacacgaagactaccattcagctctataagagagaggc 4132748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 141 - 203
Target Start/End: Original strand, 25568954 - 25569016
Alignment:
Q  141 tggtgaaaaattacacaaaggccaccattcagctctataagatagaggcgttaatctcctttg 203  Q
    |||||||||||||||| ||| ||||||||||| |||| |||| |||||| ||| | |||||||    
T  25568954 tggtgaaaaattacaccaagtccaccattcaggtctacaagagagaggcattagtttcctttg 25569016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 54; Significance: 4e-22; HSPs: 2)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 8 - 203
Target Start/End: Complemental strand, 36213232 - 36213040
Alignment:
Q  8 ttcaattgtaaaggttcttctgtaacttttgaagtccctcaaatggaagggcgtatgttgaagacgataatgatatgcattatctattcttcaaccacgg 107  Q
    |||||||| |||||||||||||||| |||||| ||||||| | |||| || ||||  || ||||| ||||||   || ||| |||||||||||||  | |    
T  36213232 ttcaattgcaaaggttcttctgtaatttttgatgtccctcgagtggatggacgtaacttaaagacaataatg---tgtattgtctattcttcaactccag 36213136  T
Q  108 ataacatagcatctgatggcctcacaaatttgttggtgaaaaattacacaaaggccaccattcagctctataagatagaggcgttaatctcctttg 203  Q
    | ||||||||||| ||||| || | |||  || |||| |||||| |||||||||| ||||||||| ||||||||| |||||| ||| |||| ||||    
T  36213135 aaaacatagcatcagatggacttaaaaacgtgatggtaaaaaatcacacaaaggctaccattcagatctataagagagaggcattagtctcatttg 36213040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 136 - 182
Target Start/End: Original strand, 18936566 - 18936612
Alignment:
Q  136 tttgttggtgaaaaattacacaaaggccaccattcagctctataaga 182  Q
    ||||||||||| ||||| |||||||  ||||||||||||||||||||    
T  18936566 tttgttggtgataaattgcacaaagaacaccattcagctctataaga 18936612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 52; Significance: 6e-21; HSPs: 4)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 18 - 203
Target Start/End: Complemental strand, 47985694 - 47985512
Alignment:
Q  18 aaggttcttctgtaacttttgaagtccctcaaatggaagggcgtatgttgaagacgataatgatatgcattatctattcttcaaccacggataacatagc 117  Q
    |||||||||| ||||||||||||||||||||| ||||| ||| ||  || |||||   |||||| |||||| ||||| |||||||| | ||| ||||| |    
T  47985694 aaggttcttcggtaacttttgaagtccctcaagtggaaaggcataacttaaagac---aatgatgtgcattgtctatacttcaacctcagatgacataac 47985598  T
Q  118 atctgatggcctcacaaatttgttggtgaaaaattacacaaaggccaccattcagctctataagatagaggcgttaatctcctttg 203  Q
    ||| |||||||| | |||  |||| |||| |||| ||||||  |||| |||||| ||||||||||  ||| | |||||||||||||    
T  47985597 atcagatggccttaaaaacgtgttagtgataaatcacacaagagccatcattcaactctataagagtgagacattaatctcctttg 47985512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 18 - 203
Target Start/End: Complemental strand, 47994981 - 47994799
Alignment:
Q  18 aaggttcttctgtaacttttgaagtccctcaaatggaagggcgtatgttgaagacgataatgatatgcattatctattcttcaaccacggataacatagc 117  Q
    |||||||||| ||||||||||||||||||||| ||||| ||| ||  || |||||   |||||| |||||| ||||| |||||||| | ||| ||||| |    
T  47994981 aaggttcttcggtaacttttgaagtccctcaagtggaaaggcataacttaaagac---aatgatgtgcattgtctatacttcaacctcagatgacataac 47994885  T
Q  118 atctgatggcctcacaaatttgttggtgaaaaattacacaaaggccaccattcagctctataagatagaggcgttaatctcctttg 203  Q
    ||| |||||||| | |||  |||| |||| |||| ||||||  |||| |||||| ||||||||||  ||| | |||||||||||||    
T  47994884 atcagatggccttaaaaacgtgttagtgataaatcacacaagagccatcattcaactctataagagtgagacattaatctcctttg 47994799  T

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Target: chr3; HSP #3
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 18 - 203
Target Start/End: Complemental strand, 48004268 - 48004086
Alignment:
Q  18 aaggttcttctgtaacttttgaagtccctcaaatggaagggcgtatgttgaagacgataatgatatgcattatctattcttcaaccacggataacatagc 117  Q
    |||||||||| ||||||||||||||||||||| ||||| ||| ||  || |||||   |||||| |||||| ||||| |||||||| | ||| ||||| |    
T  48004268 aaggttcttcggtaacttttgaagtccctcaagtggaaaggcataacttaaagac---aatgatgtgcattgtctatacttcaacctcagatgacataac 48004172  T
Q  118 atctgatggcctcacaaatttgttggtgaaaaattacacaaaggccaccattcagctctataagatagaggcgttaatctcctttg 203  Q
    ||| |||||||| | |||  |||| |||| |||| ||||||  |||| |||||| ||||||||||  ||| | |||||||||||||    
T  48004171 atcagatggccttaaaaacgtgttagtgataaatcacacaagagccatcattcaactctataagagtgagacattaatctcctttg 48004086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 18 - 203
Target Start/End: Complemental strand, 48013553 - 48013371
Alignment:
Q  18 aaggttcttctgtaacttttgaagtccctcaaatggaagggcgtatgttgaagacgataatgatatgcattatctattcttcaaccacggataacatagc 117  Q
    |||||||||| ||||||||||||||||||||| ||||| ||| ||  || |||||   |||||| |||||| ||||| |||||||| | ||| ||||| |    
T  48013553 aaggttcttcggtaacttttgaagtccctcaagtggaaaggcataacttaaagac---aatgatgtgcattgtctatacttcaacctcagatgacataac 48013457  T
Q  118 atctgatggcctcacaaatttgttggtgaaaaattacacaaaggccaccattcagctctataagatagaggcgttaatctcctttg 203  Q
    ||| |||||||| | |||  |||| |||| |||| ||||||  |||| |||||| ||||||||||  ||| | |||||||||||||    
T  48013456 atcagatggccttaaaaacgtgttagtgataaatcacacaagagccatcattcaactctataagagtgagacattaatctcctttg 48013371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0294 (Bit Score: 44; Significance: 3e-16; HSPs: 1)
Name: scaffold0294
Description:

Target: scaffold0294; HSP #1
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 95 - 182
Target Start/End: Complemental strand, 8104 - 8017
Alignment:
Q  95 tcttcaaccacggataacatagcatctgatggcctcacaaatttgttggtgaaaaattacacaaaggccaccattcagctctataaga 182  Q
    ||||||||  ||||||||||| || | ||||| || | |||| |||| |||||||||||||||||||||||||||||| |||||||||    
T  8104 tcttcaactgcggataacataacaccagatggtcttaaaaatgtgttagtgaaaaattacacaaaggccaccattcagatctataaga 8017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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