View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF5906-Insertion-1 (Length: 1070)

Name: NF5906-Insertion-1
Description: NF5906
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF5906-Insertion-1
NF5906-Insertion-1
[»] chr4 (72 HSPs)
chr4 (391-954)||(44444618-44445165)
chr4 (8-218)||(44444415-44444626)
chr4 (36-131)||(25911951-25912046)
chr4 (394-611)||(25912139-25912364)
chr4 (321-386)||(39844151-39844216)
chr4 (321-393)||(55927097-55927169)
chr4 (321-392)||(24772784-24772855)
chr4 (321-390)||(28480427-28480496)
chr4 (321-390)||(28481301-28481370)
chr4 (321-390)||(28482176-28482245)
chr4 (321-394)||(36512955-36513028)
chr4 (321-394)||(42915104-42915177)
chr4 (321-392)||(4896387-4896458)
chr4 (321-391)||(31275259-31275329)
chr4 (321-394)||(39241187-39241261)
chr4 (321-390)||(5234360-5234429)
chr4 (321-390)||(16004216-16004284)
chr4 (321-393)||(36792445-36792518)
chr4 (327-391)||(51389435-51389499)
chr4 (321-392)||(25523083-25523154)
chr4 (326-392)||(1033266-1033332)
chr4 (321-390)||(38844379-38844448)
chr4 (321-390)||(51296066-51296135)
chr4 (321-394)||(51717169-51717242)
chr4 (321-389)||(5123480-5123548)
chr4 (321-392)||(31240761-31240833)
chr4 (321-393)||(31658032-31658104)
chr4 (355-394)||(25476768-25476807)
chr4 (321-390)||(1580171-1580241)
chr4 (321-390)||(6953276-6953346)
chr4 (322-368)||(18500001-18500047)
chr4 (321-391)||(30778152-30778222)
chr4 (333-390)||(15596521-15596578)
chr4 (216-249)||(31804370-31804403)
chr4 (321-391)||(53091114-53091188)
chr4 (321-390)||(53583017-53583086)
chr4 (327-391)||(10994041-10994105)
chr4 (322-390)||(40409055-40409123)
chr4 (218-249)||(5234501-5234532)
chr4 (321-391)||(22257084-22257154)
chr4 (217-252)||(26440674-26440709)
chr4 (217-252)||(34116578-34116613)
chr4 (327-387)||(34616468-34616520)
chr4 (327-394)||(36408089-36408156)
chr4 (327-394)||(36413212-36413279)
chr4 (217-252)||(41119508-41119543)
chr4 (217-252)||(42915257-42915292)
chr4 (321-392)||(46173650-46173721)
chr4 (218-252)||(3222988-3223022)
chr4 (355-393)||(3624348-3624386)
chr4 (218-252)||(4896538-4896572)
chr4 (218-252)||(9162065-9162099)
chr4 (354-392)||(11063976-11064014)
chr4 (218-252)||(24235319-24235353)
chr4 (218-252)||(31221412-31221446)
chr4 (218-252)||(44368240-44368274)
chr4 (218-252)||(46173549-46173583)
chr4 (218-252)||(51296227-51296261)
chr4 (355-393)||(52851437-52851475)
chr4 (327-392)||(525842-525907)
chr4 (219-252)||(6370980-6371013)
chr4 (219-252)||(9032780-9032813)
chr4 (219-252)||(11064127-11064160)
chr4 (219-252)||(11997685-11997718)
chr4 (219-252)||(15596396-15596429)
chr4 (216-245)||(17363227-17363256)
chr4 (321-386)||(23690344-23690409)
chr4 (219-252)||(26885291-26885324)
chr4 (219-252)||(29384235-29384268)
chr4 (219-252)||(37547065-37547098)
chr4 (353-394)||(47998738-47998779)
chr4 (358-387)||(56364158-56364187)
[»] chr6 (28 HSPs)
chr6 (321-394)||(34021057-34021130)
chr6 (321-393)||(30906549-30906621)
chr6 (321-394)||(16336955-16337028)
chr6 (321-393)||(1897799-1897871)
chr6 (321-392)||(32447303-32447375)
chr6 (322-393)||(2582776-2582847)
chr6 (322-394)||(21857454-21857526)
chr6 (321-389)||(24752344-24752412)
chr6 (321-392)||(31517067-31517138)
chr6 (333-391)||(26378273-26378331)
chr6 (321-390)||(30733122-30733191)
chr6 (321-390)||(32853033-32853102)
chr6 (321-389)||(2340511-2340579)
chr6 (321-391)||(11785470-11785541)
chr6 (216-251)||(30714677-30714712)
chr6 (321-392)||(31480723-31480794)
chr6 (218-252)||(1196057-1196091)
chr6 (321-394)||(9954661-9954735)
chr6 (218-252)||(15722541-15722575)
chr6 (218-252)||(16337108-16337142)
chr6 (218-252)||(30796113-30796147)
chr6 (219-252)||(2163702-2163735)
chr6 (219-252)||(2175335-2175368)
chr6 (353-394)||(2241711-2241752)
chr6 (321-386)||(17768039-17768104)
chr6 (321-394)||(29383670-29383743)
chr6 (321-393)||(32253893-32253966)
chr6 (219-252)||(32457290-32457323)
[»] chr5 (59 HSPs)
chr5 (35-131)||(40418614-40418710)
chr5 (26-131)||(38988036-38988141)
chr5 (50-131)||(39880151-39880232)
chr5 (321-392)||(20719902-20719973)
chr5 (453-611)||(39168858-39169024)
chr5 (545-611)||(3299548-3299614)
chr5 (545-611)||(3392441-3392507)
chr5 (27-135)||(3299848-3299956)
chr5 (27-135)||(3392741-3392849)
chr5 (321-391)||(40566104-40566175)
chr5 (545-611)||(1849980-1850046)
chr5 (36-131)||(39726755-39726854)
chr5 (545-611)||(39879826-39879892)
chr5 (545-611)||(40418295-40418361)
chr5 (545-610)||(1163693-1163758)
chr5 (544-611)||(39399871-39399938)
chr5 (27-131)||(1163369-1163476)
chr5 (321-383)||(34767313-34767375)
chr5 (545-611)||(38987717-38987783)
chr5 (545-611)||(39726430-39726496)
chr5 (321-394)||(2117525-2117598)
chr5 (321-390)||(24431507-24431576)
chr5 (321-390)||(39595387-39595456)
chr5 (321-389)||(125205-125273)
chr5 (321-393)||(33567125-33567197)
chr5 (321-384)||(4834924-4834987)
chr5 (321-392)||(11767877-11767948)
chr5 (321-391)||(11306809-11306879)
chr5 (321-394)||(29402295-29402368)
chr5 (321-386)||(31284287-31284352)
chr5 (338-394)||(9403643-9403699)
chr5 (208-252)||(27440468-27440512)
chr5 (323-382)||(29498242-29498301)
chr5 (321-395)||(12718264-12718338)
chr5 (321-391)||(14323856-14323926)
chr5 (321-391)||(27392590-27392660)
chr5 (321-387)||(28811541-28811607)
chr5 (321-395)||(33243625-33243699)
chr5 (321-390)||(11666292-11666361)
chr5 (333-394)||(19127249-19127310)
chr5 (321-392)||(5130264-5130336)
chr5 (321-390)||(15531778-15531849)
chr5 (217-252)||(6865814-6865849)
chr5 (216-247)||(29402179-29402210)
chr5 (217-252)||(36713216-36713251)
chr5 (89-135)||(1850244-1850290)
chr5 (327-381)||(3728902-3728955)
chr5 (321-390)||(10232612-10232682)
chr5 (321-395)||(12779490-12779564)
chr5 (321-391)||(19376020-19376090)
chr5 (218-252)||(23991172-23991206)
chr5 (218-252)||(28811428-28811462)
chr5 (219-252)||(3109625-3109658)
chr5 (358-387)||(17625916-17625945)
chr5 (219-252)||(19127124-19127157)
chr5 (355-392)||(21575714-21575751)
chr5 (321-386)||(23991027-23991092)
chr5 (219-252)||(34381012-34381045)
chr5 (219-252)||(39595272-39595305)
[»] chr8 (48 HSPs)
chr8 (678-822)||(25562505-25562652)
chr8 (678-809)||(25560523-25560655)
chr8 (678-815)||(45447203-45447339)
chr8 (321-394)||(41344554-41344627)
chr8 (321-393)||(23258145-23258217)
chr8 (321-389)||(896020-896084)
chr8 (321-390)||(5359451-5359520)
chr8 (321-390)||(7678845-7678914)
chr8 (321-397)||(14029124-14029201)
chr8 (321-390)||(40102136-40102205)
chr8 (327-392)||(40413250-40413315)
chr8 (321-393)||(28473431-28473503)
chr8 (321-390)||(21648819-21648889)
chr8 (321-391)||(28927794-28927864)
chr8 (322-391)||(1370183-1370252)
chr8 (321-391)||(11223747-11223817)
chr8 (321-387)||(24503030-24503096)
chr8 (321-375)||(26871157-26871211)
chr8 (321-391)||(37524316-37524386)
chr8 (327-392)||(3989024-3989089)
chr8 (219-252)||(7596929-7596962)
chr8 (338-395)||(26294306-26294363)
chr8 (338-395)||(26307563-26307620)
chr8 (320-392)||(42543367-42543440)
chr8 (321-393)||(154403-154475)
chr8 (321-381)||(22767243-22767303)
chr8 (216-252)||(36064027-36064063)
chr8 (218-249)||(69632-69663)
chr8 (217-252)||(5502369-5502404)
chr8 (341-392)||(43403917-43403968)
chr8 (321-390)||(3650226-3650296)
chr8 (332-394)||(5502486-5502548)
chr8 (210-252)||(7279993-7280035)
chr8 (321-391)||(21273598-21273668)
chr8 (218-252)||(22852877-22852911)
chr8 (218-252)||(28927680-28927714)
chr8 (218-252)||(34473948-34473982)
chr8 (321-390)||(37101574-37101644)
chr8 (321-387)||(38128418-38128484)
chr8 (218-252)||(45101395-45101429)
chr8 (219-252)||(1796496-1796529)
chr8 (219-252)||(12732842-12732875)
chr8 (219-252)||(26871046-26871079)
chr8 (326-394)||(34474069-34474137)
chr8 (349-394)||(35500846-35500891)
chr8 (219-252)||(37524455-37524488)
chr8 (322-390)||(38779133-38779202)
chr8 (321-393)||(44103878-44103951)
[»] chr3 (55 HSPs)
chr3 (321-391)||(41111960-41112030)
chr3 (323-393)||(31997917-31997988)
chr3 (321-390)||(19418049-19418118)
chr3 (327-387)||(49130973-49131033)
chr3 (321-392)||(46473241-46473312)
chr3 (321-395)||(11173563-11173637)
chr3 (678-720)||(15018504-15018546)
chr3 (321-390)||(29706016-29706085)
chr3 (336-390)||(20162584-20162636)
chr3 (321-392)||(20380776-20380847)
chr3 (321-391)||(7231894-7231964)
chr3 (321-390)||(35272140-35272210)
chr3 (321-391)||(6126567-6126638)
chr3 (321-392)||(9027986-9028057)
chr3 (321-395)||(44365175-44365250)
chr3 (321-391)||(47849783-47849853)
chr3 (338-391)||(7293987-7294040)
chr3 (321-390)||(37302963-37303032)
chr3 (321-390)||(46315844-46315913)
chr3 (746-815)||(51252770-51252839)
chr3 (338-391)||(51672993-51673046)
chr3 (216-252)||(3958056-3958092)
chr3 (678-777)||(15017641-15017737)
chr3 (733-821)||(15018563-15018651)
chr3 (321-389)||(28269919-28269987)
chr3 (321-390)||(32457642-32457713)
chr3 (353-401)||(34733172-34733220)
chr3 (321-381)||(37215129-37215189)
chr3 (217-252)||(34021501-34021536)
chr3 (217-252)||(34607958-34607993)
chr3 (218-252)||(108430-108464)
chr3 (218-252)||(1901964-1901998)
chr3 (218-252)||(1911410-1911444)
chr3 (218-252)||(5398917-5398951)
chr3 (218-252)||(12792637-12792671)
chr3 (218-252)||(18169156-18169190)
chr3 (218-252)||(20215947-20215981)
chr3 (321-390)||(33007473-33007543)
chr3 (214-252)||(34733329-34733367)
chr3 (218-252)||(35272026-35272060)
chr3 (322-392)||(37303497-37303567)
chr3 (217-251)||(41877650-41877684)
chr3 (321-395)||(42475861-42475935)
chr3 (218-252)||(48945846-48945880)
chr3 (218-252)||(52454132-52454166)
chr3 (219-252)||(14957836-14957869)
chr3 (219-252)||(20380927-20380960)
chr3 (353-390)||(20893131-20893168)
chr3 (358-387)||(23592387-23592416)
chr3 (321-394)||(24551112-24551185)
chr3 (219-252)||(26669028-26669061)
chr3 (321-390)||(28300535-28300604)
chr3 (216-249)||(43409403-43409436)
chr3 (219-252)||(51464310-51464343)
chr3 (321-394)||(52727333-52727406)
[»] chr2 (59 HSPs)
chr2 (678-815)||(16288694-16288832)
chr2 (322-390)||(14714100-14714168)
chr2 (321-393)||(22390265-22390337)
chr2 (321-390)||(23344878-23344947)
chr2 (321-391)||(2013173-2013243)
chr2 (321-391)||(42081150-42081220)
chr2 (321-390)||(34442226-34442295)
chr2 (321-393)||(36376737-36376809)
chr2 (332-394)||(44189949-44190011)
chr2 (321-393)||(3091854-3091926)
chr2 (321-393)||(36133087-36133159)
chr2 (321-391)||(7086012-7086082)
chr2 (321-391)||(11164264-11164334)
chr2 (321-391)||(12962499-12962569)
chr2 (321-386)||(6365299-6365364)
chr2 (321-390)||(11229210-11229279)
chr2 (321-390)||(29795549-29795618)
chr2 (323-395)||(45693351-45693424)
chr2 (321-393)||(13711174-13711246)
chr2 (321-393)||(32750111-32750183)
chr2 (321-387)||(12600161-12600227)
chr2 (322-384)||(36435795-36435857)
chr2 (321-395)||(43650431-43650505)
chr2 (321-394)||(23045274-23045347)
chr2 (321-386)||(25801704-25801769)
chr2 (321-394)||(31296728-31296801)
chr2 (355-391)||(15141597-15141633)
chr2 (216-252)||(22353202-22353238)
chr2 (321-385)||(43725318-43725382)
chr2 (217-252)||(6365184-6365219)
chr2 (321-391)||(10550346-10550417)
chr2 (327-387)||(25270691-25270743)
chr2 (321-392)||(42251807-42251878)
chr2 (343-393)||(2464272-2464322)
chr2 (218-252)||(4738610-4738644)
chr2 (218-252)||(5167780-5167814)
chr2 (321-387)||(6639364-6639430)
chr2 (321-386)||(15019036-15019102)
chr2 (218-252)||(15283288-15283322)
chr2 (218-252)||(19695718-19695752)
chr2 (218-252)||(27307269-27307303)
chr2 (218-252)||(33296109-33296143)
chr2 (218-252)||(36132973-36133007)
chr2 (321-391)||(39454135-39454205)
chr2 (218-252)||(42283277-42283311)
chr2 (329-390)||(1876241-1876302)
chr2 (219-252)||(3196125-3196158)
chr2 (321-390)||(5067531-5067599)
chr2 (219-252)||(10216864-10216897)
chr2 (216-249)||(13553144-13553177)
chr2 (321-390)||(14140228-14140297)
chr2 (321-390)||(23880208-23880277)
chr2 (219-252)||(30856807-30856840)
chr2 (211-252)||(31227588-31227629)
chr2 (211-252)||(34144589-34144630)
chr2 (219-252)||(36435681-36435714)
chr2 (321-390)||(36909732-36909801)
chr2 (211-252)||(36909881-36909922)
chr2 (219-252)||(41040266-41040299)
[»] chr7 (44 HSPs)
chr7 (321-390)||(5378740-5378809)
chr7 (321-392)||(34348914-34348985)
chr7 (321-390)||(44894363-44894432)
chr7 (678-815)||(24464374-24464507)
chr7 (327-394)||(48866815-48866882)
chr7 (328-390)||(10591272-10591334)
chr7 (321-390)||(40717127-40717197)
chr7 (321-392)||(37351877-37351948)
chr7 (321-390)||(2790290-2790360)
chr7 (332-389)||(7990197-7990254)
chr7 (321-390)||(12141997-12142066)
chr7 (321-390)||(25887696-25887765)
chr7 (321-393)||(43445520-43445592)
chr7 (321-392)||(155868-155939)
chr7 (332-393)||(7807178-7807240)
chr7 (332-394)||(8792485-8792546)
chr7 (322-392)||(19510244-19510314)
chr7 (321-390)||(5978692-5978761)
chr7 (321-394)||(46651785-46651858)
chr7 (327-391)||(30180626-30180690)
chr7 (321-389)||(47193040-47193108)
chr7 (327-387)||(7701441-7701493)
chr7 (217-252)||(27164875-27164910)
chr7 (321-392)||(45607137-45607208)
chr7 (327-387)||(46022376-46022428)
chr7 (218-252)||(2469702-2469736)
chr7 (218-252)||(22330658-22330692)
chr7 (321-391)||(33684793-33684863)
chr7 (218-252)||(37352017-37352051)
chr7 (218-252)||(41966331-41966365)
chr7 (321-391)||(41966441-41966511)
chr7 (218-252)||(41985127-41985161)
chr7 (321-389)||(4182519-4182588)
chr7 (321-378)||(12102610-12102667)
chr7 (219-252)||(29162317-29162350)
chr7 (355-392)||(29355479-29355516)
chr7 (219-252)||(31982057-31982090)
chr7 (321-390)||(37856070-37856139)
chr7 (219-252)||(41080126-41080159)
chr7 (327-368)||(43025926-43025967)
chr7 (216-249)||(43079673-43079706)
chr7 (321-392)||(43260102-43260175)
chr7 (351-392)||(43657145-43657186)
chr7 (321-389)||(45432057-45432125)
[»] chr1 (46 HSPs)
chr1 (321-390)||(40610342-40610411)
chr1 (678-815)||(46605648-46605784)
chr1 (332-390)||(7645443-7645501)
chr1 (321-391)||(46948092-46948162)
chr1 (321-392)||(28253128-28253199)
chr1 (321-385)||(31817289-31817353)
chr1 (322-386)||(50061869-50061933)
chr1 (321-392)||(50659079-50659150)
chr1 (321-391)||(30631733-30631803)
chr1 (321-391)||(39010927-39010997)
chr1 (321-390)||(2362482-2362551)
chr1 (321-394)||(22389411-22389483)
chr1 (321-390)||(36690461-36690530)
chr1 (321-390)||(36706562-36706631)
chr1 (353-392)||(28716288-28716327)
chr1 (321-380)||(36418192-36418251)
chr1 (338-393)||(43755572-43755627)
chr1 (321-395)||(48872835-48872909)
chr1 (332-393)||(49453602-49453662)
chr1 (213-249)||(586893-586929)
chr1 (321-392)||(15061958-15062030)
chr1 (216-252)||(31427995-31428031)
chr1 (321-389)||(35846209-35846277)
chr1 (321-368)||(5477074-5477121)
chr1 (321-384)||(11460907-11460970)
chr1 (322-393)||(20288225-20288296)
chr1 (321-392)||(34187377-34187448)
chr1 (321-368)||(37690528-37690575)
chr1 (327-387)||(46907103-46907155)
chr1 (217-252)||(49425736-49425771)
chr1 (332-391)||(51571550-51571609)
chr1 (218-252)||(25302681-25302715)
chr1 (321-390)||(28703013-28703083)
chr1 (218-252)||(49453490-49453524)
chr1 (321-387)||(50141827-50141893)
chr1 (218-252)||(50226917-50226951)
chr1 (218-252)||(50797790-50797824)
chr1 (219-252)||(5309078-5309111)
chr1 (219-252)||(16836142-16836175)
chr1 (358-387)||(24981678-24981707)
chr1 (219-252)||(25995460-25995493)
chr1 (321-390)||(31290097-31290166)
chr1 (219-252)||(32821635-32821668)
chr1 (219-252)||(37690429-37690462)
chr1 (219-252)||(45740582-45740615)
chr1 (219-252)||(50528095-50528128)
[»] scaffold0501 (1 HSPs)
scaffold0501 (321-395)||(10400-10474)
[»] scaffold0057 (1 HSPs)
scaffold0057 (321-390)||(38992-39061)
[»] scaffold0036 (1 HSPs)
scaffold0036 (321-392)||(18117-18187)
[»] scaffold0002 (1 HSPs)
scaffold0002 (322-383)||(6541-6602)
[»] scaffold0018 (1 HSPs)
scaffold0018 (352-392)||(36146-36186)
[»] scaffold0115 (1 HSPs)
scaffold0115 (321-392)||(15076-15146)
[»] scaffold0026 (2 HSPs)
scaffold0026 (321-391)||(113738-113808)
scaffold0026 (219-252)||(113625-113658)
[»] scaffold0011 (1 HSPs)
scaffold0011 (218-252)||(219702-219736)
[»] scaffold0508 (1 HSPs)
scaffold0508 (353-394)||(11421-11462)
[»] scaffold0286 (1 HSPs)
scaffold0286 (219-252)||(18674-18707)
[»] scaffold0204 (1 HSPs)
scaffold0204 (321-393)||(27452-27525)


Alignment Details
Target: chr4 (Bit Score: 391; Significance: 0; HSPs: 72)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 391; E-Value: 0
Query Start/End: Original strand, 391 - 954
Target Start/End: Original strand, 44444618 - 44445165
Alignment:
Q  391 ttttagatattttaagaaaagtttataatcagattacaatttatcctgaacaacaactatgtcattctcttcatcgtaactagtattggtaatcaaaatt 490  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  44444618 ttttagatattttaagaaaagtttataatcagattccaatttatcctgaacaacaactatgtcattctcttcatcgtaactagtattggtaatcaaaatt 44444717  T
Q  491 gcagcacgaaggtcgccaatggtgttggtgttagctcttcctcttactcctatagtcataaccaagagcatagtcacaaggttttaaaatacgaccaaga 590  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  44444718 gcagcacgaaggtcgccaatggtgttgatgttagctcttcctcttactcctatagtcataaccaagagcatagtcaccaggttttaaaatacgaccaaga 44444817  T
Q  591 tgagtcttgatttgaaaagttatgatgaagacattataaggtatgtgattacaaggacgaggaagacaaaaaagatatgaaagtcgcgaagaagatggaa 690  Q
    ||||||||||||||||||||||||||||||||||| ||                     |||||||| ||||||||||| |||||| |||||||||||||    
T  44444818 tgagtcttgatttgaaaagttatgatgaagacattcta---------------------aggaagacgaaaaagatatggaagtcgagaagaagatggaa 44444896  T
Q  691 gagaaatgagtttttaatttgaatttttcttgattaccagccttttttaaaattcagtccctctggtaatttccgtttttggatttggcccattaaacct 790  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||    
T  44444897 gagaaatgagtttttaatttgaatttttcttgattatcagccttttttaaaattcagtccctctggtaatttccatttttggatttggccccttaaacct 44444996  T
Q  791 ggtgactggtcacatggatagacacgtcagcctttgtcaatcatacgtgcctttttgtaacagatggtgacggtaaagaccaaagt-aaaaagtttataa 889  Q
    ||||||||||||||||||||||||||| ||||| || ||  ||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||    
T  44444997 ggtgactggtcacatggatagacacgttagcctctgacagccatacgtgcctttttgtaacagatggtgacggtaaggaccaaagtaaaaaagtttataa 44445096  T
Q  890 tttaca--ggttgtttcccaataataaaagacacggggacgaaa--caaaaacacacgaacttacagga 954  Q
     |||||  | ||||||||||| ||||||||||||||||||||||   ||||||||||||||||||||||    
T  44445097 cttacaaggtttgtttcccaacaataaaagacacggggacgaaaacaaaaaacacacgaacttacagga 44445165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 180; E-Value: 1e-96
Query Start/End: Original strand, 8 - 218
Target Start/End: Original strand, 44444415 - 44444626
Alignment:
Q  8 atgaaaggcatattcttt-attgttttcgttattggagtaaacaaaacatcaacaaaagttatttttgtttaagcttgtaactagatcatccgtcaagca 106  Q
    ||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  44444415 atgaaaggcatattccttgattgttttcgttattggagtaaacaaaacatcaacaaaagtgatttttgtttaagcttgtaactagatcatccgtcaagca 44444514  T
Q  107 aatcctctaatggaacaaaaggtcttctaggtgggcatttgatagcctcgatgatttgatttcggtaaactgttcttatgttgaaggtgagatgagcgtc 206  Q
    | ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |    
T  44444515 agtcctctaatggaacaaaagatcttctaggtgggcatttgatagcctcgatgatttgatttcggtaaactgctcttatgttgaaggtgagatgagcggc 44444614  T
Q  207 ttgttttagata 218  Q
    ||||||||||||    
T  44444615 ttgttttagata 44444626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 36 - 131
Target Start/End: Original strand, 25911951 - 25912046
Alignment:
Q  36 ttattggagtaaacaaaacatcaacaaaagttatttttgtttaagcttgtaactagatcatccgtcaagcaaatcctctaatggaacaaaaggtct 131  Q
    ||||||||  ||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||| ||||| |||||||||||||||||    
T  25911951 ttattggaacaaacaaaacatcaacaaaagtgatttttgtttaagctagtaactagatcatccgtcaagcaagtcctccaatggaacaaaaggtct 25912046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 394 - 611
Target Start/End: Original strand, 25912139 - 25912364
Alignment:
Q  394 tagatattttaagaaaagtttataatcagattacaatttatcctgaaca---acaactatgtcattctcttcatcgtaactagtattggtaatcaaaatt 490  Q
    |||||| |||||||| |||| ||||||||||| | | ||||||||||||   |||||| |  ||||||||||  | |||||| | ||||| ||||||||     
T  25912139 tagataatttaagaagagttgataatcagattcccacttatcctgaacagcaacaactctaccattctcttcggcataactaatcttggtgatcaaaatg 25912238  T
Q  491 gcagcacgaaggtcgccaatggtgttggtgttagctcttcctcttactcctatag-----tcataaccaagagcatagtcacaaggttttaaaatacgac 585  Q
    |||||| |||||| |  | |||||||||||||||||| ||||  | ||||| |||     |||||||||||||||| ||||   ||||||| ||||||||    
T  25912239 gcagcatgaaggttgttattggtgttggtgttagctcctccttctcctcctctagacaggtcataaccaagagcatggtcatcgggttttagaatacgac 25912338  T
Q  586 caagatgagtcttgatttgaaaagtt 611  Q
    ||||||||||| ||||||||||||||    
T  25912339 caagatgagtcctgatttgaaaagtt 25912364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 321 - 386
Target Start/End: Complemental strand, 39844216 - 39844151
Alignment:
Q  321 ccaataaaaagagagagaaaagaagttgttaaaaaagttgtctcaaatggatgttcaaatatcact 386  Q
    |||||||||||||||| ||||||||||||||||||||||||||||| | |||||||||||||||||    
T  39844216 ccaataaaaagagagaaaaaagaagttgttaaaaaagttgtctcaattagatgttcaaatatcact 39844151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 321 - 393
Target Start/End: Original strand, 55927097 - 55927169
Alignment:
Q  321 ccaataaaaagagagagaaaagaagttgttaaaaaagttgtctcaaatggatgttcaaatatcactactcttt 393  Q
    ||||| |||||||||||||||||| |||| | |||| ||||||||||||||||||||||||||||||||||||    
T  55927097 ccaatgaaaagagagagaaaagaaattgtcacaaaaattgtctcaaatggatgttcaaatatcactactcttt 55927169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 321 - 392
Target Start/End: Original strand, 24772784 - 24772855
Alignment:
Q  321 ccaataaaaagagagagaaaagaagttgttaaaaaagttgtctcaaatggatgttcaaatatcactactctt 392  Q
    |||||||||||||||||||||||| |||| | || |||||||||||||||||||||||||||||| ||||||    
T  24772784 ccaataaaaagagagagaaaagaaattgtcacaagagttgtctcaaatggatgttcaaatatcaccactctt 24772855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 321 - 390
Target Start/End: Complemental strand, 28480496 - 28480427
Alignment:
Q  321 ccaataaaaagagagagaaaagaagttgttaaaaaagttgtctcaaatggatgttcaaatatcactactc 390  Q
    ||||| ||||||||||||||||||||||| | || ||||||||||||| | |||||||||||||||||||    
T  28480496 ccaatgaaaagagagagaaaagaagttgtcacaatagttgtctcaaatagttgttcaaatatcactactc 28480427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 321 - 390
Target Start/End: Complemental strand, 28481370 - 28481301
Alignment:
Q  321 ccaataaaaagagagagaaaagaagttgttaaaaaagttgtctcaaatggatgttcaaatatcactactc 390  Q
    ||||| ||||||||||||||||||||||| | || ||||||||||||| | |||||||||||||||||||    
T  28481370 ccaatgaaaagagagagaaaagaagttgtcacaatagttgtctcaaatagttgttcaaatatcactactc 28481301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 321 - 390
Target Start/End: Complemental strand, 28482245 - 28482176
Alignment:
Q  321 ccaataaaaagagagagaaaagaagttgttaaaaaagttgtctcaaatggatgttcaaatatcactactc 390  Q
    ||||| ||||||||||||||||||||||| | || ||||||||||||| | |||||||||||||||||||    
T  28482245 ccaatgaaaagagagagaaaagaagttgtcacaatagttgtctcaaatagttgttcaaatatcactactc 28482176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 321 - 394
Target Start/End: Original strand, 36512955 - 36513028
Alignment:
Q  321 ccaataaaaagagagagaaaagaagttgttaaaaaagttgtctcaaatggatgttcaaatatcactactctttt 394  Q
    ||||||||||||||||||||||||||||| | || | ||||||||||||||| ||||||||||| | |||||||    
T  36512955 ccaataaaaagagagagaaaagaagttgtcacaagaattgtctcaaatggattttcaaatatcattgctctttt 36513028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 321 - 394
Target Start/End: Complemental strand, 42915177 - 42915104
Alignment:
Q  321 ccaataaaaagagagagaaaagaagttgttaaaaaagttgtctcaaatggatgttcaaatatcactactctttt 394  Q
    ||||| |||||||||| |||||||||||| | ||||||||| |||||| | |||||||||||||||||||||||    
T  42915177 ccaatgaaaagagagaaaaaagaagttgtcacaaaagttgtatcaaatagttgttcaaatatcactactctttt 42915104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 321 - 392
Target Start/End: Complemental strand, 4896458 - 4896387
Alignment:
Q  321 ccaataaaaagagagagaaaagaagttgttaaaaaagttgtctcaaatggatgttcaaatatcactactctt 392  Q
    ||||| |||||||||| |||||| ||||| | ||||||||| |||||| |||||||||||||||||||||||    
T  4896458 ccaatgaaaagagagaaaaaagaggttgtcacaaaagttgtttcaaatagatgttcaaatatcactactctt 4896387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 321 - 391
Target Start/End: Original strand, 31275259 - 31275329
Alignment:
Q  321 ccaataaaaagagagagaaaagaagttgttaaaaaagttgtctcaaatggatgttcaaatatcactactct 391  Q
    ||||| |||||||||| ||||||| |||| | ||||||||| |||||||| ||||||||||||||||||||    
T  31275259 ccaatgaaaagagagaaaaaagaaattgtcacaaaagttgtatcaaatggttgttcaaatatcactactct 31275329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 321 - 394
Target Start/End: Complemental strand, 39241261 - 39241187
Alignment:
Q  321 ccaataaaaagagagagaaaagaagttgttaa-aaaagttgtctcaaatggatgttcaaatatcactactctttt 394  Q
    ||||| ||||||||||||||| ||||||| |  |||||||||||||||||| |||| ||||||||||||||||||    
T  39241261 ccaatgaaaagagagagaaaataagttgtcaccaaaagttgtctcaaatggttgttaaaatatcactactctttt 39241187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 321 - 390
Target Start/End: Complemental strand, 5234429 - 5234360
Alignment:
Q  321 ccaataaaaagagagagaaaagaagttgttaaaaaagttgtctcaaatggatgttcaaatatcactactc 390  Q
    |||||||||||||||| |||| || |||| | ||||||||| |||||||| |||||||||||||||||||    
T  5234429 ccaataaaaagagagaaaaaaaaaattgtcacaaaagttgtatcaaatggttgttcaaatatcactactc 5234360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 321 - 390
Target Start/End: Complemental strand, 16004284 - 16004216
Alignment:
Q  321 ccaataaaaagagagagaaaagaagttgttaaaaaagttgtctcaaatggatgttcaaatatcactactc 390  Q
    ||||| |||||||||| |||| ||||||| | || |||||||||||||||||||||||||||||||||||    
T  16004284 ccaatgaaaagagagaaaaaa-aagttgtcacaagagttgtctcaaatggatgttcaaatatcactactc 16004216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 321 - 393
Target Start/End: Original strand, 36792445 - 36792518
Alignment:
Q  321 ccaataaaaagagagagaaaagaagttgttaa-aaaagttgtctcaaatggatgttcaaatatcactactcttt 393  Q
    ||||| ||||||||||||||||||||||| |  ||||||||| | |||||| ||||||||||||||||||||||    
T  36792445 ccaatgaaaagagagagaaaagaagttgtcaccaaaagttgtatgaaatggttgttcaaatatcactactcttt 36792518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 327 - 391
Target Start/End: Original strand, 51389435 - 51389499
Alignment:
Q  327 aaaagagagagaaaagaagttgttaaaaaagttgtctcaaatggatgttcaaatatcactactct 391  Q
    |||||||||| |||||||||||| | ||||||||| |||||||| ||||||||||||||| ||||    
T  51389435 aaaagagagaaaaaagaagttgtcacaaaagttgtatcaaatggttgttcaaatatcactgctct 51389499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 321 - 392
Target Start/End: Complemental strand, 25523154 - 25523083
Alignment:
Q  321 ccaataaaaagagagagaaaagaagttgttaaaaaagttgtctcaaatggatgttcaaatatcactactctt 392  Q
    ||||| ||||||||||||||| ||||| | | ||||||||||||| |||| |||||||||| ||||||||||    
T  25523154 ccaatgaaaagagagagaaaataagttatcacaaaagttgtctcatatggttgttcaaataacactactctt 25523083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 326 - 392
Target Start/End: Original strand, 1033266 - 1033332
Alignment:
Q  326 aaaaagagagagaaaagaagttgttaaaaaagttgtctcaaatggatgttcaaatatcactactctt 392  Q
    ||||| ||||| |||||||||||| | ||||||||| | |||||| |||||||||||||||||||||    
T  1033266 aaaaaaagagaaaaaagaagttgtcacaaaagttgtttaaaatggttgttcaaatatcactactctt 1033332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 321 - 390
Target Start/End: Complemental strand, 38844448 - 38844379
Alignment:
Q  321 ccaataaaaagagagagaaaagaagttgttaaaaaagttgtctcaaatggatgttcaaatatcactactc 390  Q
    ||||| ||||||||||||||| ||||||| | ||||||||||||| |||| |||||||||| || |||||    
T  38844448 ccaatgaaaagagagagaaaataagttgtcacaaaagttgtctcatatggttgttcaaataacattactc 38844379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 321 - 390
Target Start/End: Complemental strand, 51296135 - 51296066
Alignment:
Q  321 ccaataaaaagagagagaaaagaagttgttaaaaaagttgtctcaaatggatgttcaaatatcactactc 390  Q
    |||||| ||||||||| ||||||  |||| | ||||||||| |||||| |||||||||||||||||||||    
T  51296135 ccaatagaaagagagaaaaaagagattgtcacaaaagttgtttcaaatagatgttcaaatatcactactc 51296066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 321 - 394
Target Start/End: Complemental strand, 51717242 - 51717169
Alignment:
Q  321 ccaataaaaagagagagaaaagaagttgttaaaaaagttgtctcaaatggatgttcaaatatcactactctttt 394  Q
    ||||| |||||||||| ||||||| |||| | | ||||||||||| |||  |||||||||||||||||||||||    
T  51717242 ccaatgaaaagagagaaaaaagaaattgtcacataagttgtctcatatgattgttcaaatatcactactctttt 51717169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 321 - 389
Target Start/End: Complemental strand, 5123548 - 5123480
Alignment:
Q  321 ccaataaaaagagagagaaaagaagttgttaaaaaagttgtctcaaatggatgttcaaatatcactact 389  Q
    ||||| |||||||||| |||| ||||||| | ||||||||||||| |||| |||||||||| |||||||    
T  5123548 ccaattaaaagagagaaaaaataagttgtcacaaaagttgtctcatatggttgttcaaataacactact 5123480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 321 - 392
Target Start/End: Original strand, 31240761 - 31240833
Alignment:
Q  321 ccaataaaaagagagagaaaagaagttgttaa-aaaagttgtctcaaatggatgttcaaatatcactactctt 392  Q
    ||||| |||||||||| |||||||||||| |  ||||||||| | |||||| |||||||||||||||||||||    
T  31240761 ccaatgaaaagagagaaaaaagaagttgtcaccaaaagttgtatgaaatggttgttcaaatatcactactctt 31240833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 321 - 393
Target Start/End: Original strand, 31658032 - 31658104
Alignment:
Q  321 ccaataaaaagagagagaaaagaagttgttaaaaaagttgtctcaaatggatgttcaaatatcactactcttt 393  Q
    ||||| ||||| |||| |||||||||||| | ||||| ||| |||||||| |||||||||||| |||||||||    
T  31658032 ccaatgaaaagtgagaaaaaagaagttgtcacaaaagctgtatcaaatggttgttcaaatatcgctactcttt 31658104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 355 - 394
Target Start/End: Original strand, 25476768 - 25476807
Alignment:
Q  355 aagttgtctcaaatggatgttcaaatatcactactctttt 394  Q
    |||||||||||||||||||||||||||||| |||||||||    
T  25476768 aagttgtctcaaatggatgttcaaatatcattactctttt 25476807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 321 - 390
Target Start/End: Complemental strand, 1580241 - 1580171
Alignment:
Q  321 ccaataaaaagagagagaaaagaagttgtta-aaaaagttgtctcaaatggatgttcaaatatcactactc 390  Q
    ||||| |||||||||| |||| ||||||| | |||||||||| | |||||| |||||||||||||||||||    
T  1580241 ccaatgaaaagagagaaaaaaaaagttgtcacaaaaagttgtatgaaatggttgttcaaatatcactactc 1580171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 321 - 390
Target Start/End: Complemental strand, 6953346 - 6953276
Alignment:
Q  321 ccaataaaaagagagagaaaagaagttgtta-aaaaagttgtctcaaatggatgttcaaatatcactactc 390  Q
    ||||| ||||||||||||||||||||||| |  |||||||||   |||||| |||||||||||||||||||    
T  6953346 ccaatgaaaagagagagaaaagaagttgtcaccaaaagttgtaagaaatggttgttcaaatatcactactc 6953276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 322 - 368
Target Start/End: Original strand, 18500001 - 18500047
Alignment:
Q  322 caataaaaagagagagaaaagaagttgttaaaaaagttgtctcaaat 368  Q
    |||||||||||||||||||||||||||| |||||| || ||||||||    
T  18500001 caataaaaagagagagaaaagaagttgtcaaaaaaattatctcaaat 18500047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 321 - 391
Target Start/End: Complemental strand, 30778222 - 30778152
Alignment:
Q  321 ccaataaaaagagagagaaaagaagttgttaaaaaagttgtctcaaatggatgttcaaatatcactactct 391  Q
    |||||||||||||||| ||||||| |||| | ||||||| | |||||| | ||||||||||||| ||||||    
T  30778222 ccaataaaaagagagaaaaaagaaattgtcataaaagttatatcaaatagttgttcaaatatcattactct 30778152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 333 - 390
Target Start/End: Original strand, 15596521 - 15596578
Alignment:
Q  333 gagagaaaagaagttgttaaaaaagttgtctcaaatggatgttcaaatatcactactc 390  Q
    |||| |||||||||||| | ||||||||| | |||||| |||||||||||||||||||    
T  15596521 gagaaaaaagaagttgtcacaaaagttgtttaaaatggttgttcaaatatcactactc 15596578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 216 - 249
Target Start/End: Complemental strand, 31804403 - 31804370
Alignment:
Q  216 atagagaaatgatatttgtacaatcactttgtga 249  Q
    ||||||||||||||||||||||||||||||||||    
T  31804403 atagagaaatgatatttgtacaatcactttgtga 31804370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 321 - 391
Target Start/End: Complemental strand, 53091188 - 53091114
Alignment:
Q  321 ccaataaaaagagagagaaaagaagttgttaaaaaagttgtctcaaatgga----tgttcaaatatcactactct 391  Q
    |||||||||  ||||| |||||||||||| | ||||||||| |||||||||    ||||||||||||||||||||    
T  53091188 ccaataaaagaagagaaaaaagaagttgtcacaaaagttgtatcaaatggatggttgttcaaatatcactactct 53091114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 321 - 390
Target Start/End: Complemental strand, 53583086 - 53583017
Alignment:
Q  321 ccaataaaaagagagagaaaagaagttgttaaaaaagttgtctcaaatggatgttcaaatatcactactc 390  Q
    ||||| |||| |||||||||| ||||||| | ||||||||||||| |||| |||||||||| || |||||    
T  53583086 ccaattaaaatagagagaaaataagttgtcacaaaagttgtctcatatggttgttcaaataacagtactc 53583017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 327 - 391
Target Start/End: Complemental strand, 10994105 - 10994041
Alignment:
Q  327 aaaagagagagaaaagaagttgttaaaaaagttgtctcaaatggatgttcaaatatcactactct 391  Q
    |||||||||||||||||||||||   | || |||||| |||||  ||||||||||||||||||||    
T  10994105 aaaagagagagaaaagaagttgtcgcataaattgtctaaaatgattgttcaaatatcactactct 10994041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 322 - 390
Target Start/End: Complemental strand, 40409123 - 40409055
Alignment:
Q  322 caataaaaagagagagaaaagaagttgttaaaaaagttgtctcaaatggatgttcaaatatcactactc 390  Q
    |||||||||| |||| ||||||||||||   |||||||| || |||| | |||||||||||||||||||    
T  40409123 caataaaaagtgagaaaaaagaagttgtaccaaaagttggctaaaatagttgttcaaatatcactactc 40409055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 218 - 249
Target Start/End: Complemental strand, 5234532 - 5234501
Alignment:
Q  218 agagaaatgatatttgtacaatcactttgtga 249  Q
    ||||||||||||||||||||||||||||||||    
T  5234532 agagaaatgatatttgtacaatcactttgtga 5234501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 321 - 391
Target Start/End: Complemental strand, 22257154 - 22257084
Alignment:
Q  321 ccaataaaaagagagagaaaagaagttgttaa-aaaagttgtctcaaatggatgttcaaatatcactactct 391  Q
    ||||| ||||||||||||||| ||||||| |  ||||||||| | |||||| ||||||||||||||||||||    
T  22257154 ccaatgaaaagagagagaaaa-aagttgtcaccaaaagttgtatgaaatggttgttcaaatatcactactct 22257084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 217 - 252
Target Start/End: Original strand, 26440674 - 26440709
Alignment:
Q  217 tagagaaatgatatttgtacaatcactttgtgacaa 252  Q
    |||||||||||||||||||||| |||||||||||||    
T  26440674 tagagaaatgatatttgtacaaccactttgtgacaa 26440709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 217 - 252
Target Start/End: Complemental strand, 34116613 - 34116578
Alignment:
Q  217 tagagaaatgatatttgtacaatcactttgtgacaa 252  Q
    |||||||||||||||||||||| |||||||||||||    
T  34116613 tagagaaatgatatttgtacaaccactttgtgacaa 34116578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 327 - 387
Target Start/End: Original strand, 34616468 - 34616520
Alignment:
Q  327 aaaagagagagaaaagaagttgttaaaaaagttgtctcaaatggatgttcaaatatcacta 387  Q
    ||||||||||||||||||||||||        |||||||||||||||||||||||||||||    
T  34616468 aaaagagagagaaaagaagttgtt--------tgtctcaaatggatgttcaaatatcacta 34616520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 327 - 394
Target Start/End: Complemental strand, 36408156 - 36408089
Alignment:
Q  327 aaaagagagagaaaagaagttgttaaaaaagttgtctcaaatggatgttcaaatatcactactctttt 394  Q
    |||||||| | ||||||| |||| | ||||||||| |||||| | |||||||||||||| ||||||||    
T  36408156 aaaagagaaaaaaaagaaattgtcacaaaagttgtatcaaatagttgttcaaatatcaccactctttt 36408089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 327 - 394
Target Start/End: Complemental strand, 36413279 - 36413212
Alignment:
Q  327 aaaagagagagaaaagaagttgttaaaaaagttgtctcaaatggatgttcaaatatcactactctttt 394  Q
    |||||||| | ||||||| |||| | ||||||||| |||||| | |||||||||||||| ||||||||    
T  36413279 aaaagagaaaaaaaagaaattgtcacaaaagttgtatcaaatagttgttcaaatatcaccactctttt 36413212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 217 - 252
Target Start/End: Complemental strand, 41119543 - 41119508
Alignment:
Q  217 tagagaaatgatatttgtacaatcactttgtgacaa 252  Q
    |||||||||||||||||||||| |||||||||||||    
T  41119543 tagagaaatgatatttgtacaaccactttgtgacaa 41119508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 217 - 252
Target Start/End: Complemental strand, 42915292 - 42915257
Alignment:
Q  217 tagagaaatgatatttgtacaatcactttgtgacaa 252  Q
    ||||||||||||||||||||||||||||| ||||||    
T  42915292 tagagaaatgatatttgtacaatcactttttgacaa 42915257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 321 - 392
Target Start/End: Original strand, 46173650 - 46173721
Alignment:
Q  321 ccaataaaaagagagagaaaagaagttgttaaaaaagttgtctcaaatggatgttcaaatatcactactctt 392  Q
    ||||| |||||||| | ||||||| |||| | ||||||||| |||||||| | ||||||||||| |||||||    
T  46173650 ccaatgaaaagagaaaaaaaagaaattgtcacaaaagttgtatcaaatggttattcaaatatcattactctt 46173721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 218 - 252
Target Start/End: Original strand, 3222988 - 3223022
Alignment:
Q  218 agagaaatgatatttgtacaatcactttgtgacaa 252  Q
    |||||||||||||||||||||||| ||||||||||    
T  3222988 agagaaatgatatttgtacaatcaatttgtgacaa 3223022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 355 - 393
Target Start/End: Complemental strand, 3624386 - 3624348
Alignment:
Q  355 aagttgtctcaaatggatgttcaaatatcactactcttt 393  Q
    |||||||||||||||| ||||||||||||||| ||||||    
T  3624386 aagttgtctcaaatggttgttcaaatatcactgctcttt 3624348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 218 - 252
Target Start/End: Complemental strand, 4896572 - 4896538
Alignment:
Q  218 agagaaatgatatttgtacaatcactttgtgacaa 252  Q
    ||||||||||||||||||||| |||||||||||||    
T  4896572 agagaaatgatatttgtacaaccactttgtgacaa 4896538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 218 - 252
Target Start/End: Original strand, 9162065 - 9162099
Alignment:
Q  218 agagaaatgatatttgtacaatcactttgtgacaa 252  Q
    |||||||||||||||||||||||| ||||||||||    
T  9162065 agagaaatgatatttgtacaatcattttgtgacaa 9162099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 354 - 392
Target Start/End: Complemental strand, 11064014 - 11063976
Alignment:
Q  354 aaagttgtctcaaatggatgttcaaatatcactactctt 392  Q
    |||||||||| |||||| |||||||||||||||||||||    
T  11064014 aaagttgtcttaaatggttgttcaaatatcactactctt 11063976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 218 - 252
Target Start/End: Original strand, 24235319 - 24235353
Alignment:
Q  218 agagaaatgatatttgtacaatcactttgtgacaa 252  Q
    |||||||||||||||||||||||| ||||||||||    
T  24235319 agagaaatgatatttgtacaatcaatttgtgacaa 24235353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 218 - 252
Target Start/End: Original strand, 31221412 - 31221446
Alignment:
Q  218 agagaaatgatatttgtacaatcactttgtgacaa 252  Q
    |||||||||||||||||||||||| ||||||||||    
T  31221412 agagaaatgatatttgtacaatcaatttgtgacaa 31221446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 218 - 252
Target Start/End: Complemental strand, 44368274 - 44368240
Alignment:
Q  218 agagaaatgatatttgtacaatcactttgtgacaa 252  Q
    |||||||||||||||||||||||| ||||||||||    
T  44368274 agagaaatgatatttgtacaatcaatttgtgacaa 44368240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 218 - 252
Target Start/End: Original strand, 46173549 - 46173583
Alignment:
Q  218 agagaaatgatatttgtacaatcactttgtgacaa 252  Q
    ||||||||||||||||||||| |||||||||||||    
T  46173549 agagaaatgatatttgtacaaccactttgtgacaa 46173583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 218 - 252
Target Start/End: Complemental strand, 51296261 - 51296227
Alignment:
Q  218 agagaaatgatatttgtacaatcactttgtgacaa 252  Q
    |||||||||||||||||||||||||||| ||||||    
T  51296261 agagaaatgatatttgtacaatcactttatgacaa 51296227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 355 - 393
Target Start/End: Original strand, 52851437 - 52851475
Alignment:
Q  355 aagttgtctcaaatggatgttcaaatatcactactcttt 393  Q
    ||||||||||  |||||||||||||||||||||||||||    
T  52851437 aagttgtctcggatggatgttcaaatatcactactcttt 52851475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 327 - 392
Target Start/End: Original strand, 525842 - 525907
Alignment:
Q  327 aaaagagagagaaaagaagttgttaaaaaagttgtctcaaatggatgttcaaatatcactactctt 392  Q
    ||||||||||||||| || |||| | ||||||||||||||||   ||||||| |||||| ||||||    
T  525842 aaaagagagagaaaaaaaattgtcacaaaagttgtctcaaataattgttcaattatcacgactctt 525907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 219 - 252
Target Start/End: Original strand, 6370980 - 6371013
Alignment:
Q  219 gagaaatgatatttgtacaatcactttgtgacaa 252  Q
    |||||||||||||||||||| |||||||||||||    
T  6370980 gagaaatgatatttgtacaaccactttgtgacaa 6371013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 219 - 252
Target Start/End: Original strand, 9032780 - 9032813
Alignment:
Q  219 gagaaatgatatttgtacaatcactttgtgacaa 252  Q
    ||||||||||||||||||||||| ||||||||||    
T  9032780 gagaaatgatatttgtacaatcaatttgtgacaa 9032813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 219 - 252
Target Start/End: Complemental strand, 11064160 - 11064127
Alignment:
Q  219 gagaaatgatatttgtacaatcactttgtgacaa 252  Q
    |||||||||||||||||||| |||||||||||||    
T  11064160 gagaaatgatatttgtacaaccactttgtgacaa 11064127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 219 - 252
Target Start/End: Original strand, 11997685 - 11997718
Alignment:
Q  219 gagaaatgatatttgtacaatcactttgtgacaa 252  Q
    |||||||||||||||||||| |||||||||||||    
T  11997685 gagaaatgatatttgtacaaccactttgtgacaa 11997718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 219 - 252
Target Start/End: Original strand, 15596396 - 15596429
Alignment:
Q  219 gagaaatgatatttgtacaatcactttgtgacaa 252  Q
    |||||||||||||||||||| |||||||||||||    
T  15596396 gagaaatgatatttgtacaaccactttgtgacaa 15596429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 216 - 245
Target Start/End: Original strand, 17363227 - 17363256
Alignment:
Q  216 atagagaaatgatatttgtacaatcacttt 245  Q
    ||||||||||||||||||||||||||||||    
T  17363227 atagagaaatgatatttgtacaatcacttt 17363256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 321 - 386
Target Start/End: Original strand, 23690344 - 23690409
Alignment:
Q  321 ccaataaaaagagagagaaaagaagttgttaaaaaagttgtctcaaatggatgttcaaatatcact 386  Q
    ||||| |||||||||| ||||||  |||| | |||| |||| |||||| |||||||||||||||||    
T  23690344 ccaatgaaaagagagaaaaaagatattgtcacaaaaattgtttcaaatagatgttcaaatatcact 23690409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 219 - 252
Target Start/End: Original strand, 26885291 - 26885324
Alignment:
Q  219 gagaaatgatatttgtacaatcactttgtgacaa 252  Q
    |||||||||||||||||||| |||||||||||||    
T  26885291 gagaaatgatatttgtacaaccactttgtgacaa 26885324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 219 - 252
Target Start/End: Complemental strand, 29384268 - 29384235
Alignment:
Q  219 gagaaatgatatttgtacaatcactttgtgacaa 252  Q
    ||||||||||||||||||||||||||| ||||||    
T  29384268 gagaaatgatatttgtacaatcactttatgacaa 29384235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 219 - 252
Target Start/End: Original strand, 37547065 - 37547098
Alignment:
Q  219 gagaaatgatatttgtacaatcactttgtgacaa 252  Q
    |||||||||||||||||||| |||||||||||||    
T  37547065 gagaaatgatatttgtacaaccactttgtgacaa 37547098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 353 - 394
Target Start/End: Original strand, 47998738 - 47998779
Alignment:
Q  353 aaaagttgtctcaaatggatgttcaaatatcactactctttt 394  Q
    ||||||||| |||||||  |||||||||||||||||||||||    
T  47998738 aaaagttgtatcaaatgattgttcaaatatcactactctttt 47998779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 358 - 387
Target Start/End: Complemental strand, 56364187 - 56364158
Alignment:
Q  358 ttgtctcaaatggatgttcaaatatcacta 387  Q
    ||||||||||||||||||||||||||||||    
T  56364187 ttgtctcaaatggatgttcaaatatcacta 56364158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 70; Significance: 5e-31; HSPs: 28)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 70; E-Value: 5e-31
Query Start/End: Original strand, 321 - 394
Target Start/End: Complemental strand, 34021130 - 34021057
Alignment:
Q  321 ccaataaaaagagagagaaaagaagttgttaaaaaagttgtctcaaatggatgttcaaatatcactactctttt 394  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34021130 ccaatgaaaagagagagaaaagaagttgttaaaaaagttgtctcaaatggatgttcaaatatcactactctttt 34021057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 321 - 393
Target Start/End: Complemental strand, 30906621 - 30906549
Alignment:
Q  321 ccaataaaaagagagagaaaagaagttgttaaaaaagttgtctcaaatggatgttcaaatatcactactcttt 393  Q
    |||||||||||||||||||||||| |||| | || |||||| |||||||||||||||||||||||||||||||    
T  30906621 ccaataaaaagagagagaaaagaaattgtcataagagttgtttcaaatggatgttcaaatatcactactcttt 30906549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 321 - 394
Target Start/End: Complemental strand, 16337028 - 16336955
Alignment:
Q  321 ccaataaaaagagagagaaaagaagttgttaaaaaagttgtctcaaatggatgttcaaatatcactactctttt 394  Q
    ||||| ||||||||||||| ||||||||| | || ||||||||||||||||||||||||||||| |||||||||    
T  16337028 ccaatgaaaagagagagaatagaagttgtcacaagagttgtctcaaatggatgttcaaatatcattactctttt 16336955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 321 - 393
Target Start/End: Original strand, 1897799 - 1897871
Alignment:
Q  321 ccaataaaaagagagagaaaagaagttgttaaaaaagttgtctcaaatggatgttcaaatatcactactcttt 393  Q
    ||||| |||||||||| |||||| ||||| | ||||||||| |||||| ||||||||||||||||||||||||    
T  1897799 ccaatgaaaagagagaaaaaagaggttgtcacaaaagttgtttcaaatagatgttcaaatatcactactcttt 1897871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 321 - 392
Target Start/End: Original strand, 32447303 - 32447375
Alignment:
Q  321 ccaataaaaagagagagaa-aagaagttgttaaaaaagttgtctcaaatggatgttcaaatatcactactctt 392  Q
    ||||| |||||||||| || || |||||||||||||||||||||  |||| ||||||||||||||||||||||    
T  32447303 ccaatgaaaagagagaaaacaaaaagttgttaaaaaagttgtctttaatgaatgttcaaatatcactactctt 32447375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 322 - 393
Target Start/End: Original strand, 2582776 - 2582847
Alignment:
Q  322 caataaaaagagagagaaaagaagttgttaaaaaagttgtctcaaatggatgttcaaatatcactactcttt 393  Q
    |||| |||||||||| |||||| ||||| | ||||||||| |||||| |||||||||||||||| |||||||    
T  2582776 caatgaaaagagagaaaaaagaggttgtcacaaaagttgtttcaaatagatgttcaaatatcaccactcttt 2582847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 322 - 394
Target Start/End: Complemental strand, 21857526 - 21857454
Alignment:
Q  322 caataaaaagagagagaaaagaagttgttaaaaaagttgtctcaaatggatgttcaaatatcactactctttt 394  Q
    ||||||||||||||| |||||||||||| | |||| |||||||| || | | |||||||||||||||| ||||    
T  21857526 caataaaaagagagaaaaaagaagttgtcataaaaattgtctcatatagttattcaaatatcactactatttt 21857454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 321 - 389
Target Start/End: Original strand, 24752344 - 24752412
Alignment:
Q  321 ccaataaaaagagagagaaaagaagttgttaaaaaagttgtctcaaatggatgttcaaatatcactact 389  Q
    ||||| ||||| |||| ||||||||||||   ||||||||||| |||||| ||||||||||||||||||    
T  24752344 ccaatgaaaagtgagaaaaaagaagttgtaccaaaagttgtctaaaatggttgttcaaatatcactact 24752412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 321 - 392
Target Start/End: Complemental strand, 31517138 - 31517067
Alignment:
Q  321 ccaataaaaagagagagaaaagaagttgttaaaaaagttgtctcaaatggatgttcaaatatcactactctt 392  Q
    |||||||||||||||| |||||||||||| | | |||||||||||  | | |||||||||| ||||||||||    
T  31517138 ccaataaaaagagagaaaaaagaagttgtcacataagttgtctcatttagttgttcaaataacactactctt 31517067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 333 - 391
Target Start/End: Complemental strand, 26378331 - 26378273
Alignment:
Q  333 gagagaaaagaagttgttaaaaaagttgtctcaaatggatgttcaaatatcactactct 391  Q
    |||| ||||||||||||   ||||||||||| |||||| ||||||||||||||||||||    
T  26378331 gagaaaaaagaagttgtatcaaaagttgtctaaaatggttgttcaaatatcactactct 26378273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 321 - 390
Target Start/End: Original strand, 30733122 - 30733191
Alignment:
Q  321 ccaataaaaagagagagaaaagaagttgttaaaaaagttgtctcaaatggatgttcaaatatcactactc 390  Q
    |||||||||| |||||  ||| || |||| | |||||||||||||||||| |||| ||||||||||||||    
T  30733122 ccaataaaaaaagagaacaaaaaaattgtcacaaaagttgtctcaaatggttgtttaaatatcactactc 30733191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 321 - 390
Target Start/End: Complemental strand, 32853102 - 32853033
Alignment:
Q  321 ccaataaaaagagagagaaaagaagttgttaaaaaagttgtctcaaatggatgttcaaatatcactactc 390  Q
    ||||| |||| ||||| |||||||||||| | |||| |||| |||||| | |||||||||||||||||||    
T  32853102 ccaatgaaaaaagagaaaaaagaagttgtcacaaaaattgtatcaaatagttgttcaaatatcactactc 32853033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 321 - 389
Target Start/End: Original strand, 2340511 - 2340579
Alignment:
Q  321 ccaataaaaagagagagaaaagaagttgttaaaaaagttgtctcaaatggatgttcaaatatcactact 389  Q
    |||||||||||||||| |||  || || ||| |||||||||||||||||  |||| |||||||||||||    
T  2340511 ccaataaaaagagagaaaaagaaaattattacaaaagttgtctcaaatgattgtttaaatatcactact 2340579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 321 - 391
Target Start/End: Original strand, 11785470 - 11785541
Alignment:
Q  321 ccaataaaaagagagagaaaagaagttgttaaaaaagttgtctcaaatg-gatgttcaaatatcactactct 391  Q
    |||||||||| ||||| |||| ||||||| | | ||||||||| ||||| | ||||||||||||||||||||    
T  11785470 ccaataaaaaaagagaaaaaacaagttgtcacataagttgtctaaaatgagttgttcaaatatcactactct 11785541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 216 - 251
Target Start/End: Original strand, 30714677 - 30714712
Alignment:
Q  216 atagagaaatgatatttgtacaatcactttgtgaca 251  Q
    |||||||||||||||||||||||||| |||||||||    
T  30714677 atagagaaatgatatttgtacaatcattttgtgaca 30714712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 321 - 392
Target Start/End: Complemental strand, 31480794 - 31480723
Alignment:
Q  321 ccaataaaaagagagagaaaagaagttgttaaaaaagttgtctcaaatggatgttcaaatatcactactctt 392  Q
    |||||||||||||||| |||||||||||| | | || ||||||||  | | |||||||||| ||||||||||    
T  31480794 ccaataaaaagagagaaaaaagaagttgtcacataaattgtctcatttagttgttcaaataacactactctt 31480723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 218 - 252
Target Start/End: Original strand, 1196057 - 1196091
Alignment:
Q  218 agagaaatgatatttgtacaatcactttgtgacaa 252  Q
    |||||||||||||||||||||||||||| ||||||    
T  1196057 agagaaatgatatttgtacaatcactttttgacaa 1196091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 321 - 394
Target Start/End: Original strand, 9954661 - 9954735
Alignment:
Q  321 ccaataaaaagagagagaaaagaagttgttaa-aaaagttgtctcaaatggatgttcaaatatcactactctttt 394  Q
    ||||| |||||||||| | |||||||||| |  ||||||||| | |||||| ||||||||||||||| |||||||    
T  9954661 ccaatgaaaagagagaaagaagaagttgtcaccaaaagttgtattaaatggttgttcaaatatcactcctctttt 9954735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 218 - 252
Target Start/End: Complemental strand, 15722575 - 15722541
Alignment:
Q  218 agagaaatgatatttgtacaatcactttgtgacaa 252  Q
    |||||||||||||||||||||||| ||||||||||    
T  15722575 agagaaatgatatttgtacaatcattttgtgacaa 15722541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 218 - 252
Target Start/End: Complemental strand, 16337142 - 16337108
Alignment:
Q  218 agagaaatgatatttgtacaatcactttgtgacaa 252  Q
    |||||||||||||||||||||||||||| ||||||    
T  16337142 agagaaatgatatttgtacaatcactttatgacaa 16337108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 218 - 252
Target Start/End: Complemental strand, 30796147 - 30796113
Alignment:
Q  218 agagaaatgatatttgtacaatcactttgtgacaa 252  Q
    ||||||||||||||||||||| |||||||||||||    
T  30796147 agagaaatgatatttgtacaaccactttgtgacaa 30796113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 219 - 252
Target Start/End: Original strand, 2163702 - 2163735
Alignment:
Q  219 gagaaatgatatttgtacaatcactttgtgacaa 252  Q
    ||||||||||||||||||||||| ||||||||||    
T  2163702 gagaaatgatatttgtacaatcaatttgtgacaa 2163735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 219 - 252
Target Start/End: Original strand, 2175335 - 2175368
Alignment:
Q  219 gagaaatgatatttgtacaatcactttgtgacaa 252  Q
    ||||||||||||||||||||||| ||||||||||    
T  2175335 gagaaatgatatttgtacaatcaatttgtgacaa 2175368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 353 - 394
Target Start/End: Complemental strand, 2241752 - 2241711
Alignment:
Q  353 aaaagttgtctcaaatggatgttcaaatatcactactctttt 394  Q
    ||||||||| |||||||| |||||||||||||||| ||||||    
T  2241752 aaaagttgtatcaaatggttgttcaaatatcactattctttt 2241711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 321 - 386
Target Start/End: Original strand, 17768039 - 17768104
Alignment:
Q  321 ccaataaaaagagagagaaaagaagttgttaaaaaagttgtctcaaatggatgttcaaatatcact 386  Q
    |||||| ||||||||  |||||||||||| |  | |||||||  ||||||||||||||||||||||    
T  17768039 ccaatagaaagagaggaaaaagaagttgtcatcatagttgtcaaaaatggatgttcaaatatcact 17768104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 321 - 394
Target Start/End: Original strand, 29383670 - 29383743
Alignment:
Q  321 ccaataaaaagagagagaaaagaagttgttaaaaaagttgtctcaaatggatgttcaaatatcactactctttt 394  Q
    ||||| |||||||||| |||||||||||| | | || ||||||||  ||  |||||||||| ||||||||||||    
T  29383670 ccaatgaaaagagagaaaaaagaagttgtcacataaattgtctcatttgcttgttcaaataacactactctttt 29383743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 321 - 393
Target Start/End: Original strand, 32253893 - 32253966
Alignment:
Q  321 ccaataaaaagagagagaaaagaag-ttgttaaaaaagttgtctcaaatggatgttcaaatatcactactcttt 393  Q
    ||||| ||||||||||||||| ||  |||| | |||||||||  ||||| | ||||||||||||||||||||||    
T  32253893 ccaatgaaaagagagagaaaaaaaaattgtcacaaaagttgtaccaaatagttgttcaaatatcactactcttt 32253966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 219 - 252
Target Start/End: Complemental strand, 32457323 - 32457290
Alignment:
Q  219 gagaaatgatatttgtacaatcactttgtgacaa 252  Q
    |||||||||||||||||||| |||||||||||||    
T  32457323 gagaaatgatatttgtacaaccactttgtgacaa 32457290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 69; Significance: 2e-30; HSPs: 59)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 35 - 131
Target Start/End: Complemental strand, 40418710 - 40418614
Alignment:
Q  35 gttattggagtaaacaaaacatcaacaaaagttatttttgtttaagcttgtaactagatcatccgtcaagcaaatcctctaatggaacaaaaggtct 131  Q
    |||||||||  ||||||||||| ||||||||| ||||||||||||||| |||||||||||||||||||||||| ||||| |||||||||||||||||    
T  40418710 gttattggaacaaacaaaacattaacaaaagtgatttttgtttaagctagtaactagatcatccgtcaagcaagtcctccaatggaacaaaaggtct 40418614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 26 - 131
Target Start/End: Complemental strand, 38988141 - 38988036
Alignment:
Q  26 attgttttcgttattggagtaaacaaaacatcaacaaaagttatttttgtttaagcttgtaactagatcatccgtcaagcaaatcctctaatggaacaaa 125  Q
    |||||| | |||||||||  ||||||||||||||||||||| ||||||||||||||| || ||||||||||||||||||||| ||||| |||||| ||||    
T  38988141 attgttgttgttattggaacaaacaaaacatcaacaaaagtgatttttgtttaagctagtgactagatcatccgtcaagcaagtcctccaatggatcaaa 38988042  T
Q  126 aggtct 131  Q
    ||||||    
T  38988041 aggtct 38988036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 50 - 131
Target Start/End: Complemental strand, 39880232 - 39880151
Alignment:
Q  50 aaaacatcaacaaaagttatttttgtttaagcttgtaactagatcatccgtcaagcaaatcctctaatggaacaaaaggtct 131  Q
    ||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||| ||||| ||||||| |||||||||    
T  39880232 aaaacatcaacaaaagtgatttttgtttaagctagtaactagatcatccgtcaagcaagtcctccaatggaaaaaaaggtct 39880151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 60; E-Value: 5e-25
Query Start/End: Original strand, 321 - 392
Target Start/End: Complemental strand, 20719973 - 20719902
Alignment:
Q  321 ccaataaaaagagagagaaaagaagttgttaaaaaagttgtctcaaatggatgttcaaatatcactactctt 392  Q
    ||||| ||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||    
T  20719973 ccaatgaaaagagagagaaaagaagttgtcacaaaagttgtctcaaatggatgttcaaatatcactactctt 20719902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 453 - 611
Target Start/End: Complemental strand, 39169024 - 39168858
Alignment:
Q  453 cattctcttcatcgtaactagtattggtaatcaaaattgcagcacgaaggtcgccaatggtgttggtgttagctcttcctc-----ttactccta---ta 544  Q
    |||| |||||||| |||||| | ||||||||||||||||||||| ||||||||||| || | ||||||||||||| |||||     ||||  | |    |    
T  39169024 cattttcttcatcataactactcttggtaatcaaaattgcagcaggaaggtcgccattgatattggtgttagctcctcctccttctttacgtccagacaa 39168925  T
Q  545 gtcataaccaagagcatagtcacaaggttttaaaatacgaccaagatgagtcttgatttgaaaagtt 611  Q
    |||||||||||||||||||||||  | |||||||||| |||| |||||||| |||||||||||||||    
T  39168924 gtcataaccaagagcatagtcaccggattttaaaatatgacctagatgagttttgatttgaaaagtt 39168858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 55; E-Value: 5e-22
Query Start/End: Original strand, 545 - 611
Target Start/End: Complemental strand, 3299614 - 3299548
Alignment:
Q  545 gtcataaccaagagcatagtcacaaggttttaaaatacgaccaagatgagtcttgatttgaaaagtt 611  Q
    ||||||||||||||||| |||||  ||||||||||||||||||||||||||||||||||||||||||    
T  3299614 gtcataaccaagagcatggtcaccgggttttaaaatacgaccaagatgagtcttgatttgaaaagtt 3299548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 55; E-Value: 5e-22
Query Start/End: Original strand, 545 - 611
Target Start/End: Complemental strand, 3392507 - 3392441
Alignment:
Q  545 gtcataaccaagagcatagtcacaaggttttaaaatacgaccaagatgagtcttgatttgaaaagtt 611  Q
    ||||||||||||||||| |||||  ||||||||||||||||||||||||||||||||||||||||||    
T  3392507 gtcataaccaagagcatggtcaccgggttttaaaatacgaccaagatgagtcttgatttgaaaagtt 3392441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 27 - 135
Target Start/End: Complemental strand, 3299956 - 3299848
Alignment:
Q  27 ttgttttcgttattggagtaaacaaaacatcaacaaaagttatttttgtttaagcttgtaactagatcatccgtcaagcaaatcctctaatggaacaaaa 126  Q
    ||||||| |||||||||   ||||||||||||| | |||| || ||||||||||||||||| | |||||||| |||||||||||||| ||||||  ||||    
T  3299956 ttgttttggttattggaagtaacaaaacatcaatagaagtgatgtttgtttaagcttgtaagtggatcatccatcaagcaaatcctccaatggataaaaa 3299857  T
Q  127 ggtcttcta 135  Q
    |||||||||    
T  3299856 ggtcttcta 3299848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 27 - 135
Target Start/End: Complemental strand, 3392849 - 3392741
Alignment:
Q  27 ttgttttcgttattggagtaaacaaaacatcaacaaaagttatttttgtttaagcttgtaactagatcatccgtcaagcaaatcctctaatggaacaaaa 126  Q
    ||||||| |||||||||   ||||||||||||| | |||| || ||||||||||||||||| | |||||||| |||||||||||||| ||||||  ||||    
T  3392849 ttgttttggttattggaagtaacaaaacatcaatagaagtgatgtttgtttaagcttgtaagtggatcatccatcaagcaaatcctccaatggataaaaa 3392750  T
Q  127 ggtcttcta 135  Q
    |||||||||    
T  3392749 ggtcttcta 3392741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 321 - 391
Target Start/End: Complemental strand, 40566175 - 40566104
Alignment:
Q  321 ccaataaaaagagagagaa-aagaagttgttaaaaaagttgtctcaaatggatgttcaaatatcactactct 391  Q
    ||||| |||||||||| || || |||||||||||||||||||||||||||||||||||||||||||||||||    
T  40566175 ccaatgaaaagagagaaaataaaaagttgttaaaaaagttgtctcaaatggatgttcaaatatcactactct 40566104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 545 - 611
Target Start/End: Complemental strand, 1850046 - 1849980
Alignment:
Q  545 gtcataaccaagagcatagtcacaaggttttaaaatacgaccaagatgagtcttgatttgaaaagtt 611  Q
    ||||||||||||||||| ||||| ||||||||||||||||| |||||||||| ||||||||||||||    
T  1850046 gtcataaccaagagcatggtcaccaggttttaaaatacgactaagatgagtcctgatttgaaaagtt 1849980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 36 - 131
Target Start/End: Complemental strand, 39726854 - 39726755
Alignment:
Q  36 ttattggagtaaacaaaacatcaacaaaagttatttttgtttaagcttgtaa----ctagatcatccgtcaagcaaatcctctaatggaacaaaaggtct 131  Q
    ||||||||  |||||||||||||||||| || ||||||||||||||| ||||    |||||||||||||||||||| ||||| |||||| ||||||||||    
T  39726854 ttattggaacaaacaaaacatcaacaaaggtgatttttgtttaagctagtaactagctagatcatccgtcaagcaagtcctccaatggatcaaaaggtct 39726755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 545 - 611
Target Start/End: Complemental strand, 39879892 - 39879826
Alignment:
Q  545 gtcataaccaagagcatagtcacaaggttttaaaatacgaccaagatgagtcttgatttgaaaagtt 611  Q
    ||||||||||||||||| |||||  ||||||||||||||||||||||||||| ||||||||||||||    
T  39879892 gtcataaccaagagcatggtcaccgggttttaaaatacgaccaagatgagtcctgatttgaaaagtt 39879826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 545 - 611
Target Start/End: Complemental strand, 40418361 - 40418295
Alignment:
Q  545 gtcataaccaagagcatagtcacaaggttttaaaatacgaccaagatgagtcttgatttgaaaagtt 611  Q
    ||||||||||||||||| |||||  ||||||||||||||||||||||||||| ||||||||||||||    
T  40418361 gtcataaccaagagcatggtcaccgggttttaaaatacgaccaagatgagtcctgatttgaaaagtt 40418295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 545 - 610
Target Start/End: Original strand, 1163693 - 1163758
Alignment:
Q  545 gtcataaccaagagcatagtcacaaggttttaaaatacgaccaagatgagtcttgatttgaaaagt 610  Q
    ||||||||||||||||| |||||  ||||||||||||||||||||||||||| |||||||||||||    
T  1163693 gtcataaccaagagcatggtcaccgggttttaaaatacgaccaagatgagtcctgatttgaaaagt 1163758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 544 - 611
Target Start/End: Complemental strand, 39399938 - 39399871
Alignment:
Q  544 agtcataaccaagagcatagtcacaaggttttaaaatacgaccaagatgagtcttgatttgaaaagtt 611  Q
    ||||||||||||||||||||||||  | |||||||||| |||||||||||||| ||||||||||||||    
T  39399938 agtcataaccaagagcatagtcaccggattttaaaatatgaccaagatgagtcctgatttgaaaagtt 39399871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 27 - 131
Target Start/End: Original strand, 1163369 - 1163476
Alignment:
Q  27 ttgttttcgttattggagtaaacaaaacatcaacaaaagttatttttgtttaagcttgtaactag---atcatccgtcaagcaaatcctctaatggaaca 123  Q
    ||||||| |||||||||   ||||||||||||| | |||| || ||||||||||||||||| |||   ||||||| |||||||||||||| ||||||| |    
T  1163369 ttgtttttgttattggaagtaacaaaacatcaatagaagtgatgtttgtttaagcttgtaagtagatcatcatccatcaagcaaatcctccaatggaaaa 1163468  T
Q  124 aaaggtct 131  Q
    ||||||||    
T  1163469 aaaggtct 1163476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 321 - 383
Target Start/End: Complemental strand, 34767375 - 34767313
Alignment:
Q  321 ccaataaaaagagagagaaaagaagttgttaaaaaagttgtctcaaatggatgttcaaatatc 383  Q
    ||||| ||||||||||||||||||||||| | || ||||||||||||| ||||||||||||||    
T  34767375 ccaatgaaaagagagagaaaagaagttgtcacaagagttgtctcaaatagatgttcaaatatc 34767313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 545 - 611
Target Start/End: Complemental strand, 38987783 - 38987717
Alignment:
Q  545 gtcataaccaagagcatagtcacaaggttttaaaatacgaccaagatgagtcttgatttgaaaagtt 611  Q
    ||||||||||||||||| |||||  |||||||| |||||||| ||||||||| ||||||||||||||    
T  38987783 gtcataaccaagagcatggtcaccgggttttaagatacgaccgagatgagtcctgatttgaaaagtt 38987717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 545 - 611
Target Start/End: Complemental strand, 39726496 - 39726430
Alignment:
Q  545 gtcataaccaagagcatagtcacaaggttttaaaatacgaccaagatgagtcttgatttgaaaagtt 611  Q
    ||||||||||||||||| |||||  |||||||| |||||||| ||||||||| ||||||||||||||    
T  39726496 gtcataaccaagagcatggtcaccgggttttaagatacgaccgagatgagtcctgatttgaaaagtt 39726430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 321 - 394
Target Start/End: Complemental strand, 2117598 - 2117525
Alignment:
Q  321 ccaataaaaagagagagaaaagaagttgttaaaaaagttgtctcaaatggatgttcaaatatcactactctttt 394  Q
    ||||| |||| ||||| |||||||||||| | ||||||||| |||||| | |||||||||||||||||||||||    
T  2117598 ccaatgaaaaaagagaaaaaagaagttgtcacaaaagttgtatcaaatagttgttcaaatatcactactctttt 2117525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 321 - 390
Target Start/End: Complemental strand, 24431576 - 24431507
Alignment:
Q  321 ccaataaaaagagagagaaaagaagttgttaaaaaagttgtctcaaatggatgttcaaatatcactactc 390  Q
    ||||| |||||||||| ||| |||||||| | || ||||||||||||||| |||||||||||||||||||    
T  24431576 ccaatgaaaagagagaaaaatgaagttgtcacaatagttgtctcaaatggttgttcaaatatcactactc 24431507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 321 - 390
Target Start/End: Original strand, 39595387 - 39595456
Alignment:
Q  321 ccaataaaaagagagagaaaagaagttgttaaaaaagttgtctcaaatggatgttcaaatatcactactc 390  Q
    ||||| |||||||||| |||||||||||| | ||||||||| |||||||| ||||||||||||| |||||    
T  39595387 ccaatgaaaagagagaaaaaagaagttgtcacaaaagttgtatcaaatggttgttcaaatatcattactc 39595456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 321 - 389
Target Start/End: Original strand, 125205 - 125273
Alignment:
Q  321 ccaataaaaagagagagaaaagaagttgttaaaaaagttgtctcaaatggatgttcaaatatcactact 389  Q
    ||||| |||||||||| ||||||||||||   ||||||||| |||||||| ||||||||||||||||||    
T  125205 ccaatgaaaagagagaaaaaagaagttgtcgcaaaagttgtatcaaatggttgttcaaatatcactact 125273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 321 - 393
Target Start/End: Complemental strand, 33567197 - 33567125
Alignment:
Q  321 ccaataaaaagagagagaaaagaagttgttaaaaaagttgtctcaaatggatgttcaaatatcactactcttt 393  Q
    ||||| |||||||||| ||||||| |||| | ||||||||| |||||||| |||||| |||||||||||||||    
T  33567197 ccaatgaaaagagagaaaaaagaaattgtcacaaaagttgtatcaaatggttgttcatatatcactactcttt 33567125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 321 - 384
Target Start/End: Complemental strand, 4834987 - 4834924
Alignment:
Q  321 ccaataaaaagagagagaaaagaagttgttaaaaaagttgtctcaaatggatgttcaaatatca 384  Q
    ||||| ||||||||||||||||||||| | | || ||||||||||||| |||||||||||||||    
T  4834987 ccaatgaaaagagagagaaaagaagttatcacaagagttgtctcaaatagatgttcaaatatca 4834924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 321 - 392
Target Start/End: Complemental strand, 11767948 - 11767877
Alignment:
Q  321 ccaataaaaagagagagaaaagaagttgttaaaaaagttgtctcaaatggatgttcaaatatcactactctt 392  Q
    ||||| ||||| |||| ||||||||||||   ||||||||||| |||||| |||||||||||||||||||||    
T  11767948 ccaatgaaaagtgagaaaaaagaagttgtaccaaaagttgtctaaaatggttgttcaaatatcactactctt 11767877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 321 - 391
Target Start/End: Original strand, 11306809 - 11306879
Alignment:
Q  321 ccaataaaaagagagagaaaagaagttgttaaaaaagttgtctcaaatggatgttcaaatatcactactct 391  Q
    ||||| |||||||||| ||||||||||||   ||||||||| |||||| | ||||||||||||||||||||    
T  11306809 ccaatgaaaagagagaaaaaagaagttgtctcaaaagttgtatcaaatagttgttcaaatatcactactct 11306879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 321 - 394
Target Start/End: Original strand, 29402295 - 29402368
Alignment:
Q  321 ccaataaaaagagagagaaaagaagttgttaaaaaagttgtctcaaatggatgttcaaatatcactactctttt 394  Q
    |||||||||||| ||| |||||||||||| | | ||||||||||| |||| |||||||| ||||| ||||||||    
T  29402295 ccaataaaaagaaagaaaaaagaagttgtcacataagttgtctcacatggttgttcaaacatcaccactctttt 29402368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 321 - 386
Target Start/End: Complemental strand, 31284352 - 31284287
Alignment:
Q  321 ccaataaaaagagagagaaaagaagttgttaaaaaagttgtctcaaatggatgttcaaatatcact 386  Q
    ||||| |||||||||||||||||||||||   ||||||||| | |||||| |||||||||||||||    
T  31284352 ccaatgaaaagagagagaaaagaagttgtcgcaaaagttgtatgaaatggttgttcaaatatcact 31284287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 338 - 394
Target Start/End: Original strand, 9403643 - 9403699
Alignment:
Q  338 aaaagaagttgttaaaaaagttgtctcaaatggatgttcaaatatcactactctttt 394  Q
    |||||||||||| | ||||||||| |||||||| |||| ||||||||||||||||||    
T  9403643 aaaagaagttgtcacaaaagttgtatcaaatggttgtttaaatatcactactctttt 9403699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 208 - 252
Target Start/End: Original strand, 27440468 - 27440512
Alignment:
Q  208 tgttttagatagagaaatgatatttgtacaatcactttgtgacaa 252  Q
    |||||||||| ||||||||||||||||||||||| ||||||||||    
T  27440468 tgttttagattgagaaatgatatttgtacaatcattttgtgacaa 27440512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 323 - 382
Target Start/End: Original strand, 29498242 - 29498301
Alignment:
Q  323 aataaaaagagagagaaaagaagttgttaaaaaagttgtctcaaatggatgttcaaatat 382  Q
    ||||||||||||||||||| ||||||| | |||| ||||||||||||  |||||||||||    
T  29498242 aataaaaagagagagaaaataagttgtcataaaatttgtctcaaatgattgttcaaatat 29498301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 321 - 395
Target Start/End: Complemental strand, 12718338 - 12718264
Alignment:
Q  321 ccaataaaaagagagagaaaagaagttgttaaaaaagttgtctcaaatggatgttcaaatatcactactctttta 395  Q
    ||||| |||||| |||||||||||||||| | |||| ||||   |||||| ||||||||||||||||||| ||||    
T  12718338 ccaatgaaaagaaagagaaaagaagttgtcacaaaaattgttgaaaatggttgttcaaatatcactactcattta 12718264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 321 - 391
Target Start/End: Complemental strand, 14323926 - 14323856
Alignment:
Q  321 ccaataaaaagagagagaaaagaagttgttaaaaaagttgtctcaaatggatgttcaaatatcactactct 391  Q
    ||||||||||| |||| ||||||||||||   ||||||| ||||||| || |||| |||||||||||||||    
T  14323926 ccaataaaaagtgagaaaaaagaagttgtaccaaaagttatctcaaaaggttgtttaaatatcactactct 14323856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 321 - 391
Target Start/End: Complemental strand, 27392660 - 27392590
Alignment:
Q  321 ccaataaaaagagagagaaaagaagttgttaaaaaagttgtctcaaatggatgttcaaatatcactactct 391  Q
    ||||| |||||||| | |||| ||||||| | ||||||||||||| |||| |||||||||| |||||||||    
T  27392660 ccaatgaaaagagaaaaaaaataagttgtcacaaaagttgtctcatatggttgttcaaataacactactct 27392590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 321 - 387
Target Start/End: Original strand, 28811541 - 28811607
Alignment:
Q  321 ccaataaaaagagagagaaaagaagttgttaaaaaagttgtctcaaatggatgttcaaatatcacta 387  Q
    ||||| |||||||||| |||||| ||||| | ||||||||| |||||| ||| ||||||||||||||    
T  28811541 ccaatgaaaagagagaaaaaagaggttgtcacaaaagttgtttcaaatagatattcaaatatcacta 28811607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 321 - 395
Target Start/End: Complemental strand, 33243699 - 33243625
Alignment:
Q  321 ccaataaaaagagagagaaaagaagttgttaaaaaagttgtctcaaatggatgttcaaatatcactactctttta 395  Q
    ||||| |||||||||| |||| || |||| | ||||||| ||| |||||| ||||||||||||| ||||||||||    
T  33243699 ccaatgaaaagagagaaaaaataaattgtcacaaaagttatctgaaatggttgttcaaatatcattactctttta 33243625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 321 - 390
Target Start/End: Original strand, 11666292 - 11666361
Alignment:
Q  321 ccaataaaaagagagagaaaagaagttgttaaaaaagttgtctcaaatggatgttcaaatatcactactc 390  Q
    ||||| |||||||||| |||||||||||||| ||||||| ||||| |||| | |||||||| | ||||||    
T  11666292 ccaatgaaaagagagaaaaaagaagttgttacaaaagttatctcatatggtttttcaaataacgctactc 11666361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 333 - 394
Target Start/End: Original strand, 19127249 - 19127310
Alignment:
Q  333 gagagaaaagaagttgttaaaaaagttgtctcaaatggatgttcaaatatcactactctttt 394  Q
    |||| ||||||||||||   ||||||||| | |||||| |||||||||||||||||||||||    
T  19127249 gagaaaaaagaagttgtcgcaaaagttgtttaaaatggttgttcaaatatcactactctttt 19127310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 321 - 392
Target Start/End: Complemental strand, 5130336 - 5130264
Alignment:
Q  321 ccaataaaaagagagagaaaagaagttgtta-aaaaagttgtctcaaatggatgttcaaatatcactactctt 392  Q
    ||||| |||||||||| |||||||||||| | ||||| |||| | |||| | |||||||||||||||||||||    
T  5130336 ccaatgaaaagagagaaaaaagaagttgtcacaaaaaattgtatgaaatagttgttcaaatatcactactctt 5130264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 321 - 390
Target Start/End: Complemental strand, 15531849 - 15531778
Alignment:
Q  321 ccaataaaaagagagagaaaagaagttgt--taaaaaagttgtctcaaatggatgttcaaatatcactactc 390  Q
    ||||| |||||||||| ||||||| ||||  ||||||| ||||||||| ||  |||||||||||||||||||    
T  15531849 ccaatgaaaagagagaaaaaagaaattgtcataaaaaaattgtctcaactgattgttcaaatatcactactc 15531778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 217 - 252
Target Start/End: Complemental strand, 6865849 - 6865814
Alignment:
Q  217 tagagaaatgatatttgtacaatcactttgtgacaa 252  Q
    |||||||||||||||||||||| |||||||||||||    
T  6865849 tagagaaatgatatttgtacaaccactttgtgacaa 6865814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 216 - 247
Target Start/End: Original strand, 29402179 - 29402210
Alignment:
Q  216 atagagaaatgatatttgtacaatcactttgt 247  Q
    ||||||||||||||||||||||||||||||||    
T  29402179 atagagaaatgatatttgtacaatcactttgt 29402210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 217 - 252
Target Start/End: Complemental strand, 36713251 - 36713216
Alignment:
Q  217 tagagaaatgatatttgtacaatcactttgtgacaa 252  Q
    |||||||||||||||||||||| |||||||||||||    
T  36713251 tagagaaatgatatttgtacaaccactttgtgacaa 36713216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 89 - 135
Target Start/End: Complemental strand, 1850290 - 1850244
Alignment:
Q  89 tagatcatccgtcaagcaaatcctctaatggaacaaaaggtcttcta 135  Q
    |||||||||| |||||||||||||| ||||||  |||||||||||||    
T  1850290 tagatcatccatcaagcaaatcctccaatggataaaaaggtcttcta 1850244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 327 - 381
Target Start/End: Complemental strand, 3728955 - 3728902
Alignment:
Q  327 aaaagagagagaaaagaagttgttaaaaaagttgtctcaaatggatgttcaaata 381  Q
    |||||||||| |||||||||||||| |||| ||||||||||||  ||||||||||    
T  3728955 aaaagagaga-aaaagaagttgttataaaaattgtctcaaatgattgttcaaata 3728902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 321 - 390
Target Start/End: Original strand, 10232612 - 10232682
Alignment:
Q  321 ccaataaaaagagagagaaaagaagttgttaa-aaaagttgtctcaaatggatgttcaaatatcactactc 390  Q
    ||||| |||||||||| |||||||||||| |  ||||||||| | |||| | |||||||||||||||||||    
T  10232612 ccaatgaaaagagagaaaaaagaagttgtcaccaaaagttgtataaaatagttgttcaaatatcactactc 10232682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 321 - 395
Target Start/End: Complemental strand, 12779564 - 12779490
Alignment:
Q  321 ccaataaaaagagagagaaaagaagttgttaaaaaagttgtctcaaatggatgttcaaatatcactactctttta 395  Q
    ||||| |||||| |||||||||||||||| | |||| ||||   |||||| | ||||||||||||||||| ||||    
T  12779564 ccaatgaaaagaaagagaaaagaagttgtcacaaaaattgttgaaaatggttattcaaatatcactactcattta 12779490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 321 - 391
Target Start/End: Complemental strand, 19376090 - 19376020
Alignment:
Q  321 ccaataaaaagagagagaaaagaagttgttaaaaaagttgtctcaaatggatgttcaaatatcactactct 391  Q
    ||||| |||||||||| |||||||||||| | | |||||||||||  | | |||||||||| |||||||||    
T  19376090 ccaatgaaaagagagaaaaaagaagttgtcacataagttgtctcatttagttgttcaaataacactactct 19376020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 218 - 252
Target Start/End: Complemental strand, 23991206 - 23991172
Alignment:
Q  218 agagaaatgatatttgtacaatcactttgtgacaa 252  Q
    ||||||||||||||||||||| |||||||||||||    
T  23991206 agagaaatgatatttgtacaaccactttgtgacaa 23991172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 218 - 252
Target Start/End: Original strand, 28811428 - 28811462
Alignment:
Q  218 agagaaatgatatttgtacaatcactttgtgacaa 252  Q
    ||||||||||||||||||||| |||||||||||||    
T  28811428 agagaaatgatatttgtacaaccactttgtgacaa 28811462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 219 - 252
Target Start/End: Complemental strand, 3109658 - 3109625
Alignment:
Q  219 gagaaatgatatttgtacaatcactttgtgacaa 252  Q
    ||||||||||||||||||||||| ||||||||||    
T  3109658 gagaaatgatatttgtacaatcaatttgtgacaa 3109625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 358 - 387
Target Start/End: Original strand, 17625916 - 17625945
Alignment:
Q  358 ttgtctcaaatggatgttcaaatatcacta 387  Q
    ||||||||||||||||||||||||||||||    
T  17625916 ttgtctcaaatggatgttcaaatatcacta 17625945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 219 - 252
Target Start/End: Original strand, 19127124 - 19127157
Alignment:
Q  219 gagaaatgatatttgtacaatcactttgtgacaa 252  Q
    |||||||||||||||||||| |||||||||||||    
T  19127124 gagaaatgatatttgtacaaccactttgtgacaa 19127157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 355 - 392
Target Start/End: Complemental strand, 21575751 - 21575714
Alignment:
Q  355 aagttgtctcaaatggatgttcaaatatcactactctt 392  Q
    |||||||||||||||| ||||||||||||| |||||||    
T  21575751 aagttgtctcaaatggttgttcaaatatcattactctt 21575714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 321 - 386
Target Start/End: Complemental strand, 23991092 - 23991027
Alignment:
Q  321 ccaataaaaagagagagaaaagaagttgttaaaaaagttgtctcaaatggatgttcaaatatcact 386  Q
    |||||||||||||| | ||||||||||||||  | |||||||  |||||  |||||||||||||||    
T  23991092 ccaataaaaagagataaaaaagaagttgttatgatagttgtcaaaaatgattgttcaaatatcact 23991027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 219 - 252
Target Start/End: Original strand, 34381012 - 34381045
Alignment:
Q  219 gagaaatgatatttgtacaatcactttgtgacaa 252  Q
    |||||||||||||||||||| |||||||||||||    
T  34381012 gagaaatgatatttgtacaaccactttgtgacaa 34381045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 219 - 252
Target Start/End: Original strand, 39595272 - 39595305
Alignment:
Q  219 gagaaatgatatttgtacaatcactttgtgacaa 252  Q
    |||||||||||||||||||| |||||||||||||    
T  39595272 gagaaatgatatttgtacaaccactttgtgacaa 39595305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 68; Significance: 8e-30; HSPs: 48)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 68; E-Value: 8e-30
Query Start/End: Original strand, 678 - 822
Target Start/End: Original strand, 25562505 - 25562652
Alignment:
Q  678 gaagaagatggaagagaaatgagtttttaatttgaatttttcttgattaccagcc----ttttttaaaattcagtccctctggtaatttccgtttttgga 773  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| | |||    ||||||   ||| |||||||||  |||||| | ||||||||    
T  25562505 gaagaagatggaagagaaatgagtttttaatttgaatttttcttgatta-ctgcctttttttttttggatttagtccctctcataattttcttttttgga 25562603  T
Q  774 tttggcccattaaacctggtgactggtcacatggatagacacgtcagcc 822  Q
    ||||| || || |||||||||||||||||||||||| ||||| ||||||    
T  25562604 tttggtcccttgaacctggtgactggtcacatggatggacacatcagcc 25562652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 678 - 809
Target Start/End: Complemental strand, 25560655 - 25560523
Alignment:
Q  678 gaagaagatggaagagaaatgagtttttaatttgaatttttcttgattaccagcctttttta-aaattcagtccctctggtaatttccgtttttggattt 776  Q
    ||||||||||||||||||| ||||||||| ||||||||||||||||||||   |||||||||   ||| |||||||||   |||||  ||||||||||||    
T  25560655 gaagaagatggaagagaaacgagtttttagtttgaatttttcttgattactgcccttttttatggatttagtccctcttcaaatttttgtttttggattt 25560556  T
Q  777 ggcccattaaacctggtgactggtcacatggat 809  Q
    || || || ||||||||||||||||||||||||    
T  25560555 ggtcccttgaacctggtgactggtcacatggat 25560523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 58; E-Value: 8e-24
Query Start/End: Original strand, 678 - 815
Target Start/End: Complemental strand, 45447339 - 45447203
Alignment:
Q  678 gaagaagatggaagagaaatgagtttttaatttgaatttttcttgattaccagccttttttaaaattcagtccctctggtaatttccgtttttggatttg 777  Q
    ||||||||||||||||||||  |||||||||||||||||||| ||| |||| | |||||||   ||| ||||||||| |||||||  |||||||||||||    
T  45447339 gaagaagatggaagagaaattggtttttaatttgaatttttcgtgactacc-gtctttttttggatttagtccctctcgtaatttttgtttttggatttg 45447241  T
Q  778 gcccattaaacctggtgactggtcacatggatagacac 815  Q
    | || || ||  |||||||||||||||||||| |||||    
T  45447240 gtcctttgaatatggtgactggtcacatggatggacac 45447203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 321 - 394
Target Start/End: Complemental strand, 41344627 - 41344554
Alignment:
Q  321 ccaataaaaagagagagaaaagaagttgttaaaaaagttgtctcaaatggatgttcaaatatcactactctttt 394  Q
    ||||| ||||||||||||||||||||| | | || |||||||||||||||||||||||||||||||||||||||    
T  41344627 ccaatgaaaagagagagaaaagaagttatcataagagttgtctcaaatggatgttcaaatatcactactctttt 41344554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 321 - 393
Target Start/End: Original strand, 23258145 - 23258217
Alignment:
Q  321 ccaataaaaagagagagaaaagaagttgttaaaaaagttgtctcaaatggatgttcaaatatcactactcttt 393  Q
    ||||| |||||||||| |||||||||||| | |||| |||| |||||||| ||||||||||||||||||||||    
T  23258145 ccaatgaaaagagagaaaaaagaagttgtcacaaaaattgtttcaaatggttgttcaaatatcactactcttt 23258217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 321 - 389
Target Start/End: Original strand, 896020 - 896084
Alignment:
Q  321 ccaataaaaagagagagaaaagaagttgttaaaaaagttgtctcaaatggatgttcaaatatcactact 389  Q
    ||||| |||||||||| |||||||||||||||||||||||||||||    |||||||||||||||||||    
T  896020 ccaatgaaaagagagaaaaaagaagttgttaaaaaagttgtctcaa----atgttcaaatatcactact 896084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 321 - 390
Target Start/End: Original strand, 5359451 - 5359520
Alignment:
Q  321 ccaataaaaagagagagaaaagaagttgttaaaaaagttgtctcaaatggatgttcaaatatcactactc 390  Q
    |||||||||||||||| ||||||  |||| | ||||||||| |||||| |||||||||||||||||||||    
T  5359451 ccaataaaaagagagaaaaaagagattgtcacaaaagttgtttcaaatagatgttcaaatatcactactc 5359520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 321 - 390
Target Start/End: Original strand, 7678845 - 7678914
Alignment:
Q  321 ccaataaaaagagagagaaaagaagttgttaaaaaagttgtctcaaatggatgttcaaatatcactactc 390  Q
    ||||| |||||||||| |||||||||||||| ||||||||| |||||| | ||||||||||||| |||||    
T  7678845 ccaatgaaaagagagaaaaaagaagttgttacaaaagttgtatcaaatagttgttcaaatatcattactc 7678914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 321 - 397
Target Start/End: Complemental strand, 14029201 - 14029124
Alignment:
Q  321 ccaataaaaagagagagaaaagaagttgttaa-aaaagttgtctcaaatggatgttcaaatatcactactcttttaga 397  Q
    ||||| ||||||||||||||| ||||||| |  |||||||||||||||||| |||| ||||||||||||||| |||||    
T  14029201 ccaatgaaaagagagagaaaataagttgtcaccaaaagttgtctcaaatggttgttaaaatatcactactctattaga 14029124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 321 - 390
Target Start/End: Original strand, 40102136 - 40102205
Alignment:
Q  321 ccaataaaaagagagagaaaagaagttgttaaaaaagttgtctcaaatggatgttcaaatatcactactc 390  Q
    ||||| ||||||||||||||| ||||||| | ||||||||||||| |||| |||||||||| ||||||||    
T  40102136 ccaatgaaaagagagagaaaataagttgtcacaaaagttgtctcatatggttgttcaaataacactactc 40102205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 327 - 392
Target Start/End: Complemental strand, 40413315 - 40413250
Alignment:
Q  327 aaaagagagagaaaagaagttgttaaaaaagttgtctcaaatggatgttcaaatatcactactctt 392  Q
    |||||||||| |||||||||| | | ||||||||| |||||||| |||||||||||||||||||||    
T  40413315 aaaagagagaaaaaagaagttatcataaaagttgtatcaaatggttgttcaaatatcactactctt 40413250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 321 - 393
Target Start/End: Complemental strand, 28473503 - 28473431
Alignment:
Q  321 ccaataaaaagagagagaaaagaagttgttaaaaaagttgtctcaaatggatgttcaaatatcactactcttt 393  Q
    ||||| |||||||||| ||||||||||||||||||| ||||||||| |  ||||||||||||| || ||||||    
T  28473503 ccaatgaaaagagagaaaaaagaagttgttaaaaaaattgtctcaattaaatgttcaaatatcgctcctcttt 28473431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 321 - 390
Target Start/End: Complemental strand, 21648889 - 21648819
Alignment:
Q  321 ccaataaaaagagagagaaaagaagttgttaa-aaaagttgtctcaaatggatgttcaaatatcactactc 390  Q
    ||||| ||||||||||||||| ||||||| |  |||||||||||||||||| |||| ||||||||||||||    
T  21648889 ccaatgaaaagagagagaaaataagttgtcaccaaaagttgtctcaaatggttgttaaaatatcactactc 21648819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 321 - 391
Target Start/End: Original strand, 28927794 - 28927864
Alignment:
Q  321 ccaataaaaagagagagaaaagaagttgttaaaaaagttgtctcaaatggatgttcaaatatcactactct 391  Q
    ||||| ||||||||||||||||||||||| | |||| || | |||||||| |||||||||||||| |||||    
T  28927794 ccaatgaaaagagagagaaaagaagttgtcacaaaaattttatcaaatggttgttcaaatatcaccactct 28927864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 322 - 391
Target Start/End: Complemental strand, 1370252 - 1370183
Alignment:
Q  322 caataaaaagagagagaaaagaagttgttaaaaaagttgtctcaaatggatgttcaaatatcactactct 391  Q
    |||||||| || ||| |||| ||||| ||  |||| ||||||||||||||||||||||||||||||||||    
T  1370252 caataaaatgaaagaaaaaataagtttttccaaaaattgtctcaaatggatgttcaaatatcactactct 1370183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 321 - 391
Target Start/End: Complemental strand, 11223817 - 11223747
Alignment:
Q  321 ccaataaaaagagagagaaaagaagttgttaaaaaagttgtctcaaatggatgttcaaatatcactactct 391  Q
    ||||| ||||| |||| ||||||||||||   ||||||||||||||| |  ||||||||||||||||||||    
T  11223817 ccaatgaaaagtgagaaaaaagaagttgtaccaaaagttgtctcaaaagattgttcaaatatcactactct 11223747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 321 - 387
Target Start/End: Original strand, 24503030 - 24503096
Alignment:
Q  321 ccaataaaaagagagagaaaagaagttgttaaaaaagttgtctcaaatggatgttcaaatatcacta 387  Q
    ||||| |||||||||| ||| |||||||| | |||||||||||||||||| | |||||||| |||||    
T  24503030 ccaatgaaaagagagaaaaatgaagttgtcataaaagttgtctcaaatggttattcaaataacacta 24503096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 321 - 375
Target Start/End: Original strand, 26871157 - 26871211
Alignment:
Q  321 ccaataaaaagagagagaaaagaagttgttaaaaaagttgtctcaaatggatgtt 375  Q
    ||||| |||||||||||||||||| |||| | || ||||||||||||||||||||    
T  26871157 ccaatgaaaagagagagaaaagaaattgtcacaagagttgtctcaaatggatgtt 26871211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 321 - 391
Target Start/End: Complemental strand, 37524386 - 37524316
Alignment:
Q  321 ccaataaaaagagagagaaaagaagttgttaaaaaagttgtctcaaatggatgttcaaatatcactactct 391  Q
    ||||| |||||||||| |||||| ||||| | ||| ||| | |||||| ||||||||||||||||||||||    
T  37524386 ccaatgaaaagagagaaaaaagaggttgtcacaaaggttatttcaaatagatgttcaaatatcactactct 37524316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 327 - 392
Target Start/End: Original strand, 3989024 - 3989089
Alignment:
Q  327 aaaagagagagaaaagaagttgttaaaaaagttgtctcaaatggatgttcaaatatcactactctt 392  Q
    |||||||||| |||||||||||| | | |||||||||||  ||| |||||||||| ||||||||||    
T  3989024 aaaagagagaaaaaagaagttgtcacataagttgtctcatttggttgttcaaataacactactctt 3989089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 219 - 252
Target Start/End: Complemental strand, 7596962 - 7596929
Alignment:
Q  219 gagaaatgatatttgtacaatcactttgtgacaa 252  Q
    ||||||||||||||||||||||||||||||||||    
T  7596962 gagaaatgatatttgtacaatcactttgtgacaa 7596929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 338 - 395
Target Start/End: Original strand, 26294306 - 26294363
Alignment:
Q  338 aaaagaagttgttaaaaaagttgtctcaaatggatgttcaaatatcactactctttta 395  Q
    |||||| ||||| | ||||||||| ||||||  |||||||||||||||||||||||||    
T  26294306 aaaagaggttgtcacaaaagttgtttcaaatatatgttcaaatatcactactctttta 26294363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 338 - 395
Target Start/End: Original strand, 26307563 - 26307620
Alignment:
Q  338 aaaagaagttgttaaaaaagttgtctcaaatggatgttcaaatatcactactctttta 395  Q
    |||||| ||||| | ||||||||| ||||||  |||||||||||||||||||||||||    
T  26307563 aaaagaggttgtcacaaaagttgtttcaaatatatgttcaaatatcactactctttta 26307620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 320 - 392
Target Start/End: Complemental strand, 42543440 - 42543367
Alignment:
Q  320 gccaataaaaagagagagaaaagaagttgttaa-aaaagttgtctcaaatggatgttcaaatatcactactctt 392  Q
    |||||| |||||||||| |||||||||||| |  ||||||||| | |||||| ||||||| |||||||||||||    
T  42543440 gccaatgaaaagagagaaaaaagaagttgtcaccaaaagttgtatgaaatggttgttcaattatcactactctt 42543367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 321 - 393
Target Start/End: Original strand, 154403 - 154475
Alignment:
Q  321 ccaataaaaagagagagaaaagaagttgttaaaaaagttgtctcaaatggatgttcaaatatcactactcttt 393  Q
    |||||||||||||||| ||   ||||||| | || |||||||| || ||| ||||||||||||||||||||||    
T  154403 ccaataaaaagagagaaaatgaaagttgtcacaatagttgtcttaattggttgttcaaatatcactactcttt 154475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 321 - 381
Target Start/End: Original strand, 22767243 - 22767303
Alignment:
Q  321 ccaataaaaagagagagaaaagaagttgttaaaaaagttgtctcaaatggatgttcaaata 381  Q
    ||||| |||||||||| |||||||||||| | ||||||||||||| | || ||||||||||    
T  22767243 ccaatgaaaagagagaaaaaagaagttgtcacaaaagttgtctcatacggttgttcaaata 22767303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 216 - 252
Target Start/End: Original strand, 36064027 - 36064063
Alignment:
Q  216 atagagaaatgatatttgtacaatcactttgtgacaa 252  Q
    |||||||||||||||||||||||||| ||||||||||    
T  36064027 atagagaaatgatatttgtacaatcattttgtgacaa 36064063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 218 - 249
Target Start/End: Complemental strand, 69663 - 69632
Alignment:
Q  218 agagaaatgatatttgtacaatcactttgtga 249  Q
    ||||||||||||||||||||||||||||||||    
T  69663 agagaaatgatatttgtacaatcactttgtga 69632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 217 - 252
Target Start/End: Original strand, 5502369 - 5502404
Alignment:
Q  217 tagagaaatgatatttgtacaatcactttgtgacaa 252  Q
    |||||||||||||||||||||| |||||||||||||    
T  5502369 tagagaaatgatatttgtacaaccactttgtgacaa 5502404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 341 - 392
Target Start/End: Original strand, 43403917 - 43403968
Alignment:
Q  341 agaagttgttaaaaaagttgtctcaaatggatgttcaaatatcactactctt 392  Q
    ||||||||| |  ||||||||||||||| | |||||||||||||||||||||    
T  43403917 agaagttgtcacgaaagttgtctcaaatagttgttcaaatatcactactctt 43403968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 321 - 390
Target Start/End: Original strand, 3650226 - 3650296
Alignment:
Q  321 ccaataaaaagagagagaaaagaagttgttaa-aaaagttgtctcaaatggatgttcaaatatcactactc 390  Q
    ||||| ||||||||||||||| || |||| |  ||||||| |||||||||| |||| ||||||||||||||    
T  3650226 ccaatgaaaagagagagaaaataaattgtcaccaaaagttatctcaaatggttgttaaaatatcactactc 3650296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 332 - 394
Target Start/End: Original strand, 5502486 - 5502548
Alignment:
Q  332 agagagaaaagaagttgttaaaaaagttgtctcaaatggatgttcaaatatcactactctttt 394  Q
    ||||||| |||||||||| | |||| || | |||||||  |||||||||||||||||||||||    
T  5502486 agagagagaagaagttgtcacaaaaattatatcaaatgattgttcaaatatcactactctttt 5502548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 210 - 252
Target Start/End: Complemental strand, 7280035 - 7279993
Alignment:
Q  210 ttttagatagagaaatgatatttgtacaatcactttgtgacaa 252  Q
    ||||| ||||||||||||||||||||||  |||||||||||||    
T  7280035 ttttatatagagaaatgatatttgtacatccactttgtgacaa 7279993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 321 - 391
Target Start/End: Complemental strand, 21273668 - 21273598
Alignment:
Q  321 ccaataaaaagagagagaaaagaagttgttaaaaaagttgtctcaaatggatgttcaaatatcactactct 391  Q
    ||||| |||||||||| || | ||||||| | ||||||||| | |||| | ||||||||||||||||||||    
T  21273668 ccaatgaaaagagagaaaagaaaagttgtcacaaaagttgtatgaaatagttgttcaaatatcactactct 21273598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 218 - 252
Target Start/End: Complemental strand, 22852911 - 22852877
Alignment:
Q  218 agagaaatgatatttgtacaatcactttgtgacaa 252  Q
    ||||||||||||||||||||| |||||||||||||    
T  22852911 agagaaatgatatttgtacaaccactttgtgacaa 22852877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 218 - 252
Target Start/End: Original strand, 28927680 - 28927714
Alignment:
Q  218 agagaaatgatatttgtacaatcactttgtgacaa 252  Q
    ||||||||||||||||||||| |||||||||||||    
T  28927680 agagaaatgatatttgtacaaccactttgtgacaa 28927714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 218 - 252
Target Start/End: Original strand, 34473948 - 34473982
Alignment:
Q  218 agagaaatgatatttgtacaatcactttgtgacaa 252  Q
    |||||||||||||||||||| ||||||||||||||    
T  34473948 agagaaatgatatttgtacattcactttgtgacaa 34473982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 321 - 390
Target Start/End: Complemental strand, 37101644 - 37101574
Alignment:
Q  321 ccaataaaaagagagagaaaagaagttgttaa-aaaagttgtctcaaatggatgttcaaatatcactactc 390  Q
    ||||| |||||||||| |||||||||||| |  |||| |||| | |||||| |||||||||||||||||||    
T  37101644 ccaatgaaaagagagaaaaaagaagttgtcacgaaaaattgtatgaaatggttgttcaaatatcactactc 37101574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 321 - 387
Target Start/End: Complemental strand, 38128484 - 38128418
Alignment:
Q  321 ccaataaaaagagagagaaaagaagttgttaaaaaagttgtctcaaatggatgttcaaatatcacta 387  Q
    ||||| ||||| |||| |||||||||||| | |||| |||| | |||||| ||||||||||||||||    
T  38128484 ccaatgaaaagtgagaaaaaagaagttgtcacaaaaattgtttaaaatggttgttcaaatatcacta 38128418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 218 - 252
Target Start/End: Original strand, 45101395 - 45101429
Alignment:
Q  218 agagaaatgatatttgtacaatcactttgtgacaa 252  Q
    ||||||||||||||||||||| |||||||||||||    
T  45101395 agagaaatgatatttgtacaaccactttgtgacaa 45101429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 219 - 252
Target Start/End: Original strand, 1796496 - 1796529
Alignment:
Q  219 gagaaatgatatttgtacaatcactttgtgacaa 252  Q
    |||||||||||||||||||| |||||||||||||    
T  1796496 gagaaatgatatttgtacaaccactttgtgacaa 1796529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 219 - 252
Target Start/End: Original strand, 12732842 - 12732875
Alignment:
Q  219 gagaaatgatatttgtacaatcactttgtgacaa 252  Q
    |||||||||||||||||||| |||||||||||||    
T  12732842 gagaaatgatatttgtacaaccactttgtgacaa 12732875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 219 - 252
Target Start/End: Original strand, 26871046 - 26871079
Alignment:
Q  219 gagaaatgatatttgtacaatcactttgtgacaa 252  Q
    ||||||||||||||||||||||||||| ||||||    
T  26871046 gagaaatgatatttgtacaatcactttatgacaa 26871079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 326 - 394
Target Start/End: Original strand, 34474069 - 34474137
Alignment:
Q  326 aaaaagagagagaaaagaagttgttaa-aaaagttgtctcaaatggatgttcaaatatcactactctttt 394  Q
    ||||||||||| |||||||||||| |  ||||||||| | |||||| ||||||||||||| |||||||||    
T  34474069 aaaaagagaga-aaaagaagttgtcaccaaaagttgtatgaaatggttgttcaaatatcattactctttt 34474137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 349 - 394
Target Start/End: Complemental strand, 35500891 - 35500846
Alignment:
Q  349 ttaaaaaagttgtctcaaatggatgttcaaatatcactactctttt 394  Q
    |||||||| || ||||||||||||||||||||||||  ||||||||    
T  35500891 ttaaaaaaattatctcaaatggatgttcaaatatcagaactctttt 35500846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 219 - 252
Target Start/End: Complemental strand, 37524488 - 37524455
Alignment:
Q  219 gagaaatgatatttgtacaatcactttgtgacaa 252  Q
    |||||||||||||||||||| |||||||||||||    
T  37524488 gagaaatgatatttgtacaagcactttgtgacaa 37524455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 322 - 390
Target Start/End: Original strand, 38779133 - 38779202
Alignment:
Q  322 caataaaaagagagagaaaagaagttgttaaaaaagttgtctcaaatg-gatgttcaaatatcactactc 390  Q
    ||||||||| ||||| |||||||||||| | | || |||||| ||||| | |||||||||||||||||||    
T  38779133 caataaaaatagagaaaaaagaagttgtcacataaattgtctaaaatgagttgttcaaatatcactactc 38779202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 321 - 393
Target Start/End: Original strand, 44103878 - 44103951
Alignment:
Q  321 ccaataaaaagagagagaaaagaa-gttgttaaaaaagttgtctcaaatggatgttcaaatatcactactcttt 393  Q
    ||||| ||||||||||||||| || ||| | | || |||| ||| |||||| ||||||||||||||||||||||    
T  44103878 ccaatgaaaagagagagaaaaaaaagttatcacaatagttatcttaaatggttgttcaaatatcactactcttt 44103951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 67; Significance: 3e-29; HSPs: 55)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 321 - 391
Target Start/End: Complemental strand, 41112030 - 41111960
Alignment:
Q  321 ccaataaaaagagagagaaaagaagttgttaaaaaagttgtctcaaatggatgttcaaatatcactactct 391  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41112030 ccaatgaaaagagagagaaaagaagttgttaaaaaagttgtctcaaatggatgttcaaatatcactactct 41111960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 323 - 393
Target Start/End: Original strand, 31997917 - 31997988
Alignment:
Q  323 aataaaaagagagagaaaagaagttgttaa-aaaagttgtctcaaatggatgttcaaatatcactactcttt 393  Q
    ||||||||||||||||||||||||||| |  |||||||||||||||||| ||||||||||||||||||||||    
T  31997917 aataaaaagagagagaaaagaagttgtcatcaaaagttgtctcaaatggttgttcaaatatcactactcttt 31997988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 321 - 390
Target Start/End: Complemental strand, 19418118 - 19418049
Alignment:
Q  321 ccaataaaaagagagagaaaagaagttgttaaaaaagttgtctcaaatggatgttcaaatatcactactc 390  Q
    ||||| ||||||||||||||||||||||| | || |||||||||||||||||||||||||||||| ||||    
T  19418118 ccaatgaaaagagagagaaaagaagttgtcacaagagttgtctcaaatggatgttcaaatatcaccactc 19418049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 327 - 387
Target Start/End: Original strand, 49130973 - 49131033
Alignment:
Q  327 aaaagagagagaaaagaagttgttaaaaaagttgtctcaaatggatgttcaaatatcacta 387  Q
    ||||||||||||||||||||||| | |||| ||||||||||||||||||||||||||||||    
T  49130973 aaaagagagagaaaagaagttgtcacaaaaattgtctcaaatggatgttcaaatatcacta 49131033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 321 - 392
Target Start/End: Original strand, 46473241 - 46473312
Alignment:
Q  321 ccaataaaaagagagagaaaagaagttgttaaaaaagttgtctcaaatggatgttcaaatatcactactctt 392  Q
    ||||| |||||||||| |||||||||||| | ||||||||| |||||||| ||||||||||||| |||||||    
T  46473241 ccaatgaaaagagagaaaaaagaagttgtcataaaagttgtatcaaatggttgttcaaatatcattactctt 46473312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 321 - 395
Target Start/End: Original strand, 11173563 - 11173637
Alignment:
Q  321 ccaataaaaagagagagaaaagaagttgttaaaaaagttgtctcaaatggatgttcaaatatcactactctttta 395  Q
    ||||| |||||||||| |||||||||||| | ||||||||| |||||||| ||||||||||| | ||||||||||    
T  11173563 ccaatgaaaagagagaaaaaagaagttgtcacaaaagttgtatcaaatggttgttcaaatattattactctttta 11173637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 678 - 720
Target Start/End: Original strand, 15018504 - 15018546
Alignment:
Q  678 gaagaagatggaagagaaatgagtttttaatttgaatttttct 720  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  15018504 gaagaagatggaagagaaatgagtttttaatttgaatttttct 15018546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 321 - 390
Target Start/End: Original strand, 29706016 - 29706085
Alignment:
Q  321 ccaataaaaagagagagaaaagaagttgttaaaaaagttgtctcaaatggatgttcaaatatcactactc 390  Q
    ||||| |||||||||| |||||||||||| | ||||||||| |||||| | |||||||||||||||||||    
T  29706016 ccaatgaaaagagagaaaaaagaagttgtcacaaaagttgtatcaaatagttgttcaaatatcactactc 29706085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 336 - 390
Target Start/End: Complemental strand, 20162636 - 20162584
Alignment:
Q  336 agaaaagaagttgttaaaaaagttgtctcaaatggatgttcaaatatcactactc 390  Q
    |||||| ||||||||||||  ||||||||||||||||||||||||||||||||||    
T  20162636 agaaaaaaagttgttaaaa--gttgtctcaaatggatgttcaaatatcactactc 20162584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 321 - 392
Target Start/End: Complemental strand, 20380847 - 20380776
Alignment:
Q  321 ccaataaaaagagagagaaaagaagttgttaaaaaagttgtctcaaatggatgttcaaatatcactactctt 392  Q
    ||||| ||||| |||| |||||||||||| | ||||||||| | |||||| |||||||||||||||||||||    
T  20380847 ccaatgaaaagtgagaaaaaagaagttgtcacaaaagttgtttaaaatggttgttcaaatatcactactctt 20380776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 321 - 391
Target Start/End: Complemental strand, 7231964 - 7231894
Alignment:
Q  321 ccaataaaaagagagagaaaagaagttgttaaaaaagttgtctcaaatggatgttcaaatatcactactct 391  Q
    ||||| |||||||||| |||| || |||| | ||||||||| |||||||| ||||||||||||||||||||    
T  7231964 ccaatgaaaagagagaaaaaataaattgtcacaaaagttgtatcaaatggttgttcaaatatcactactct 7231894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 321 - 390
Target Start/End: Original strand, 35272140 - 35272210
Alignment:
Q  321 ccaataaaaagagagagaaaagaagttgttaaaaaagttgtctcaaatgga-tgttcaaatatcactactc 390  Q
    |||||||||||||||| |||||||||||| | | ||||||||| ||||| | |||||||||||||||||||    
T  35272140 ccaataaaaagagagaaaaaagaagttgtcacataagttgtctaaaatgaattgttcaaatatcactactc 35272210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 321 - 391
Target Start/End: Original strand, 6126567 - 6126638
Alignment:
Q  321 ccaataaaaagagagagaaaagaagttgttaa-aaaagttgtctcaaatggatgttcaaatatcactactct 391  Q
    ||||| |||||||||| |||||||||||| |  ||||||||| | |||||| ||||||||||||||||||||    
T  6126567 ccaatgaaaagagagaaaaaagaagttgtaaccaaaagttgtatgaaatggttgttcaaatatcactactct 6126638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 321 - 392
Target Start/End: Original strand, 9027986 - 9028057
Alignment:
Q  321 ccaataaaaagagagagaaaagaagttgttaaaaaagttgtctcaaatggatgttcaaatatcactactctt 392  Q
    |||||||||| ||||||||| |||||||| | |||| | || |||||||| ||||||||||||||| |||||    
T  9027986 ccaataaaaatagagagaaacgaagttgtcacaaaaatcgtatcaaatggttgttcaaatatcacttctctt 9028057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 321 - 395
Target Start/End: Complemental strand, 44365250 - 44365175
Alignment:
Q  321 ccaataaaaagagagagaaaagaagttgtta-aaaaagttgtctcaaatggatgttcaaatatcactactctttta 395  Q
    ||||| ||||||||||||||||||||||| |  |||| |||| | |||||| |||||||||||||| |||||||||    
T  44365250 ccaatgaaaagagagagaaaagaagttgtcaccaaaaattgtataaaatggttgttcaaatatcaccactctttta 44365175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 321 - 391
Target Start/End: Original strand, 47849783 - 47849853
Alignment:
Q  321 ccaataaaaagagagagaaaagaagttgttaaaaaagttgtctcaaatggatgttcaaatatcactactct 391  Q
    ||||| |||||||||| |||||| | ||| | || |||||| |||||| ||||||||||||||||||||||    
T  47849783 ccaatgaaaagagagaaaaaagaggctgtcacaagagttgtttcaaatagatgttcaaatatcactactct 47849853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 338 - 391
Target Start/End: Complemental strand, 7294040 - 7293987
Alignment:
Q  338 aaaagaagttgttaaaaaagttgtctcaaatggatgttcaaatatcactactct 391  Q
    ||||||||||||   ||||||||||| |||||| ||||||||||||||||||||    
T  7294040 aaaagaagttgtatcaaaagttgtctaaaatggttgttcaaatatcactactct 7293987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 321 - 390
Target Start/End: Complemental strand, 37303032 - 37302963
Alignment:
Q  321 ccaataaaaagagagagaaaagaagttgttaaaaaagttgtctcaaatggatgttcaaatatcactactc 390  Q
    ||||| |||||||||| ||||||| |||| | ||||||||||||| |||  |||||||||| ||||||||    
T  37303032 ccaatgaaaagagagaaaaaagaaattgtcacaaaagttgtctcatatgcttgttcaaataacactactc 37302963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 321 - 390
Target Start/End: Complemental strand, 46315913 - 46315844
Alignment:
Q  321 ccaataaaaagagagagaaaagaagttgttaaaaaagttgtctcaaatggatgttcaaatatcactactc 390  Q
    ||||| |||||| ||| |||| ||||||| | || ||||||||| ||||||||||||||||||| |||||    
T  46315913 ccaatgaaaagaaagataaaaaaagttgtcacaagagttgtctcgaatggatgttcaaatatcaatactc 46315844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 746 - 815
Target Start/End: Complemental strand, 51252839 - 51252770
Alignment:
Q  746 agtccctctggtaatttccgtttttggatttggcccattaaacctggtgactggtcacatggatagacac 815  Q
    ||||||||||  ||||| | ||||||||| |||  | |||||||||||||||||||||||||||| ||||    
T  51252839 agtccctctgagaattttcatttttggatgtggttccttaaacctggtgactggtcacatggatatacac 51252770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 338 - 391
Target Start/End: Original strand, 51672993 - 51673046
Alignment:
Q  338 aaaagaagttgttaaaaaagttgtctcaaatggatgttcaaatatcactactct 391  Q
    ||||||||||||   ||||||||||| |||||| ||||||||||||||||||||    
T  51672993 aaaagaagttgtaccaaaagttgtctaaaatggttgttcaaatatcactactct 51673046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 216 - 252
Target Start/End: Complemental strand, 3958092 - 3958056
Alignment:
Q  216 atagagaaatgatatttgtacaatcactttgtgacaa 252  Q
    |||||||||||||||||||||||||| ||||||||||    
T  3958092 atagagaaatgatatttgtacaatcaatttgtgacaa 3958056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 678 - 777
Target Start/End: Complemental strand, 15017737 - 15017641
Alignment:
Q  678 gaagaagatggaagagaaatgagtttttaatttgaatttttcttgattaccagccttttttaaaattcagtccctctggtaatttccgtttttggatttg 777  Q
    |||||||| ||| | |||||| ||||||||||| ||||||||||||||||| |  ||||||  |||| |||||||||| |||||| | ||| ||||||||    
T  15017737 gaagaagaaggacgtgaaatgggtttttaatttaaatttttcttgattacc-gattttttt--aatttagtccctctgataattttcatttatggatttg 15017641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 733 - 821
Target Start/End: Original strand, 15018563 - 15018651
Alignment:
Q  733 ttttttaaaattcagtccctctggtaatttccgtttttggatttggcccattaaacctggtgactggtcacatggatagacacgtcagc 821  Q
    ||||||  |||| |||||||  | ||||||  |||||||||||||| || ||||||||||||||| |||||||| || ||||| |||||    
T  15018563 ttttttgtaatttagtcccttagataattttggtttttggatttggtcccttaaacctggtgactagtcacatgaatggacacatcagc 15018651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 321 - 389
Target Start/End: Original strand, 28269919 - 28269987
Alignment:
Q  321 ccaataaaaagagagagaaaagaagttgttaaaaaagttgtctcaaatggatgttcaaatatcactact 389  Q
    ||||| |||||| ||| ||||||||||||   ||||||||||||| |||| |||||||||| |||||||    
T  28269919 ccaatgaaaagatagaaaaaagaagttgtcgcaaaagttgtctcatatggttgttcaaataacactact 28269987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 321 - 390
Target Start/End: Complemental strand, 32457713 - 32457642
Alignment:
Q  321 ccaataaaaagagagagaaaagaagttgttaaaaaag--ttgtctcaaatggatgttcaaatatcactactc 390  Q
    ||||| |||||||||| |||||||||||| ||||||   |||| |||||| | |||||||||||||||||||    
T  32457713 ccaatgaaaagagagaaaaaagaagttgtcaaaaaaaaattgtatcaaatagttgttcaaatatcactactc 32457642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 353 - 401
Target Start/End: Complemental strand, 34733220 - 34733172
Alignment:
Q  353 aaaagttgtctcaaatggatgttcaaatatcactactcttttagatatt 401  Q
    ||||||||| |||||| ||||||||||||||||||||| || |||||||    
T  34733220 aaaagttgtttcaaatagatgttcaaatatcactactcattaagatatt 34733172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 321 - 381
Target Start/End: Complemental strand, 37215189 - 37215129
Alignment:
Q  321 ccaataaaaagagagagaaaagaagttgttaaaaaagttgtctcaaatggatgttcaaata 381  Q
    ||||| |||||||||| |||| ||||||| | ||||||||||||| |||| ||||||||||    
T  37215189 ccaatgaaaagagagaaaaaataagttgtcacaaaagttgtctcatatggttgttcaaata 37215129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 217 - 252
Target Start/End: Complemental strand, 34021536 - 34021501
Alignment:
Q  217 tagagaaatgatatttgtacaatcactttgtgacaa 252  Q
    ||||||||||||||||||||||||| ||||||||||    
T  34021536 tagagaaatgatatttgtacaatcaatttgtgacaa 34021501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 217 - 252
Target Start/End: Complemental strand, 34607993 - 34607958
Alignment:
Q  217 tagagaaatgatatttgtacaatcactttgtgacaa 252  Q
    |||||||||||||||||||||| |||||||||||||    
T  34607993 tagagaaatgatatttgtacaaccactttgtgacaa 34607958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 218 - 252
Target Start/End: Original strand, 108430 - 108464
Alignment:
Q  218 agagaaatgatatttgtacaatcactttgtgacaa 252  Q
    ||||||||||||||||||||| |||||||||||||    
T  108430 agagaaatgatatttgtacaaccactttgtgacaa 108464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 218 - 252
Target Start/End: Complemental strand, 1901998 - 1901964
Alignment:
Q  218 agagaaatgatatttgtacaatcactttgtgacaa 252  Q
    ||||||||||||||||||||| |||||||||||||    
T  1901998 agagaaatgatatttgtacaaccactttgtgacaa 1901964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 218 - 252
Target Start/End: Complemental strand, 1911444 - 1911410
Alignment:
Q  218 agagaaatgatatttgtacaatcactttgtgacaa 252  Q
    ||||||||||||||||||||| |||||||||||||    
T  1911444 agagaaatgatatttgtacaaccactttgtgacaa 1911410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 218 - 252
Target Start/End: Original strand, 5398917 - 5398951
Alignment:
Q  218 agagaaatgatatttgtacaatcactttgtgacaa 252  Q
    ||||||||||||||||||||| |||||||||||||    
T  5398917 agagaaatgatatttgtacaaccactttgtgacaa 5398951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 218 - 252
Target Start/End: Original strand, 12792637 - 12792671
Alignment:
Q  218 agagaaatgatatttgtacaatcactttgtgacaa 252  Q
    ||||||||||||||||||||| |||||||||||||    
T  12792637 agagaaatgatatttgtacaaccactttgtgacaa 12792671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 218 - 252
Target Start/End: Original strand, 18169156 - 18169190
Alignment:
Q  218 agagaaatgatatttgtacaatcactttgtgacaa 252  Q
    ||||||||||||||||||||| |||||||||||||    
T  18169156 agagaaatgatatttgtacaaccactttgtgacaa 18169190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 218 - 252
Target Start/End: Original strand, 20215947 - 20215981
Alignment:
Q  218 agagaaatgatatttgtacaatcactttgtgacaa 252  Q
    ||||||||||||||||||||| |||||||||||||    
T  20215947 agagaaatgatatttgtacaaccactttgtgacaa 20215981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 321 - 390
Target Start/End: Original strand, 33007473 - 33007543
Alignment:
Q  321 ccaataaaaagagagagaaaa-gaagttgttaaaaaagttgtctcaaatggatgttcaaatatcactactc 390  Q
    ||||| |||||||||| |||| |||||||| | |||| |||||||| |||| |||||||||| ||||||||    
T  33007473 ccaatgaaaagagagaaaaaaagaagttgtcacaaaaattgtctcatatggttgttcaaataacactactc 33007543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 214 - 252
Target Start/End: Complemental strand, 34733367 - 34733329
Alignment:
Q  214 agatagagaaatgatatttgtacaatcactttgtgacaa 252  Q
    ||||||| ||||||||||||||||| |||||||||||||    
T  34733367 agatagataaatgatatttgtacaaccactttgtgacaa 34733329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 218 - 252
Target Start/End: Original strand, 35272026 - 35272060
Alignment:
Q  218 agagaaatgatatttgtacaatcactttgtgacaa 252  Q
    ||||||||||||||||||||| |||||||||||||    
T  35272026 agagaaatgatatttgtacaaccactttgtgacaa 35272060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 322 - 392
Target Start/End: Original strand, 37303497 - 37303567
Alignment:
Q  322 caataaaaagagagagaaaagaagttgttaaaaaagttgtctcaaatggatgttcaaatatcactactctt 392  Q
    |||| |||||||||| |||| || |||| | ||||||||||||| || | |||||||||| ||||||||||    
T  37303497 caatgaaaagagagaaaaaataaattgtcacaaaagttgtctcatatagttgttcaaataacactactctt 37303567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 217 - 251
Target Start/End: Complemental strand, 41877684 - 41877650
Alignment:
Q  217 tagagaaatgatatttgtacaatcactttgtgaca 251  Q
    |||||||||||||||||||||| ||||||||||||    
T  41877684 tagagaaatgatatttgtacaaccactttgtgaca 41877650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 321 - 395
Target Start/End: Complemental strand, 42475935 - 42475861
Alignment:
Q  321 ccaataaaaagagagagaaaagaagttgttaaaaaagttgtctcaaatggatgttcaaatatcactactctttta 395  Q
    ||||| |||||||||| |||| ||||| | | ||||||||||| | |||| |||||||||| |||||||| ||||    
T  42475935 ccaatgaaaagagagaaaaaataagttttcacaaaagttgtcttatatggttgttcaaataacactactcattta 42475861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 218 - 252
Target Start/End: Original strand, 48945846 - 48945880
Alignment:
Q  218 agagaaatgatatttgtacaatcactttgtgacaa 252  Q
    ||||||||||||||||||||| |||||||||||||    
T  48945846 agagaaatgatatttgtacaaccactttgtgacaa 48945880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 218 - 252
Target Start/End: Complemental strand, 52454166 - 52454132
Alignment:
Q  218 agagaaatgatatttgtacaatcactttgtgacaa 252  Q
    |||||||||||||||||||||||| ||||||||||    
T  52454166 agagaaatgatatttgtacaatcaatttgtgacaa 52454132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 219 - 252
Target Start/End: Original strand, 14957836 - 14957869
Alignment:
Q  219 gagaaatgatatttgtacaatcactttgtgacaa 252  Q
    |||||||||||||||||||| |||||||||||||    
T  14957836 gagaaatgatatttgtacaaccactttgtgacaa 14957869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 219 - 252
Target Start/End: Complemental strand, 20380960 - 20380927
Alignment:
Q  219 gagaaatgatatttgtacaatcactttgtgacaa 252  Q
    |||||||||||||||||||| |||||||||||||    
T  20380960 gagaaatgatatttgtacaaccactttgtgacaa 20380927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 353 - 390
Target Start/End: Complemental strand, 20893168 - 20893131
Alignment:
Q  353 aaaagttgtctcaaatggatgttcaaatatcactactc 390  Q
    |||||||||||||||||| |||| ||||||||||||||    
T  20893168 aaaagttgtctcaaatggttgttaaaatatcactactc 20893131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 358 - 387
Target Start/End: Original strand, 23592387 - 23592416
Alignment:
Q  358 ttgtctcaaatggatgttcaaatatcacta 387  Q
    ||||||||||||||||||||||||||||||    
T  23592387 ttgtctcaaatggatgttcaaatatcacta 23592416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 321 - 394
Target Start/End: Complemental strand, 24551185 - 24551112
Alignment:
Q  321 ccaataaaaagagagagaaaagaagttgttaaaaaagttgtctcaaatggatgttcaaatatcactactctttt 394  Q
    ||||| |||||||||| |||||||||||| | | || ||||||||  ||  |||||||||| ||||||||||||    
T  24551185 ccaatgaaaagagagaaaaaagaagttgtcacataaattgtctcatttgattgttcaaataacactactctttt 24551112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 219 - 252
Target Start/End: Original strand, 26669028 - 26669061
Alignment:
Q  219 gagaaatgatatttgtacaatcactttgtgacaa 252  Q
    ||||||||||||||||||||||||||||| ||||    
T  26669028 gagaaatgatatttgtacaatcactttgttacaa 26669061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 321 - 390
Target Start/End: Complemental strand, 28300604 - 28300535
Alignment:
Q  321 ccaataaaaagagagagaaaagaagttgttaaaaaagttgtctcaaatggatgttcaaatatcactactc 390  Q
    ||||| |||||||||| || | ||||||| | || |||||| ||| |||| |||||||||||||||||||    
T  28300604 ccaatgaaaagagagaaaataaaagttgtcacaagagttgtatcatatggttgttcaaatatcactactc 28300535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 216 - 249
Target Start/End: Complemental strand, 43409436 - 43409403
Alignment:
Q  216 atagagaaatgatatttgtacaatcactttgtga 249  Q
    ||||||||||||||||||||||| ||||||||||    
T  43409436 atagagaaatgatatttgtacaaccactttgtga 43409403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 219 - 252
Target Start/End: Complemental strand, 51464343 - 51464310
Alignment:
Q  219 gagaaatgatatttgtacaatcactttgtgacaa 252  Q
    |||||||||||||||||||| |||||||||||||    
T  51464343 gagaaatgatatttgtacaaccactttgtgacaa 51464310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 321 - 394
Target Start/End: Complemental strand, 52727406 - 52727333
Alignment:
Q  321 ccaataaaaagagagagaaaagaagttgttaaaaaagttgtctcaaatggatgttcaaatatcactactctttt 394  Q
    ||||| |||| ||||| ||||||  |||| | |||| |||| |||||| |||||| ||||||||||||||||||    
T  52727406 ccaatgaaaatagagaaaaaagagattgtcacaaaaattgtttcaaatagatgtttaaatatcactactctttt 52727333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 63; Significance: 8e-27; HSPs: 59)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 63; E-Value: 8e-27
Query Start/End: Original strand, 678 - 815
Target Start/End: Original strand, 16288694 - 16288832
Alignment:
Q  678 gaagaagatggaagagaaatgagtttttaatttgaatttttcttgattaccagccttttttaaaattcagtccctctggtaa-tttccgtttttggattt 776  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||    ||||||||   ||| ||||||||| |||| ||| |||||||||||||    
T  16288694 gaagacgatggaagagaaatgagtttttaatttgaatttttcttgattagtgccctttttttttatttagtccctctcgtaatttttcgtttttggattt 16288793  T
Q  777 ggcccattaaacctggtgactggtcacatggatagacac 815  Q
    || || || |||||||||| |||||| |||||| |||||    
T  16288794 ggtcccttgaacctggtgattggtcatatggatggacac 16288832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 322 - 390
Target Start/End: Original strand, 14714100 - 14714168
Alignment:
Q  322 caataaaaagagagagaaaagaagttgttaaaaaagttgtctcaaatggatgttcaaatatcactactc 390  Q
    |||| ||||||||||||||||||||||| | |||| |||||||||||||||||||||||||||||||||    
T  14714100 caatgaaaagagagagaaaagaagttgtcacaaaaattgtctcaaatggatgttcaaatatcactactc 14714168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 321 - 393
Target Start/End: Original strand, 22390265 - 22390337
Alignment:
Q  321 ccaataaaaagagagagaaaagaagttgttaaaaaagttgtctcaaatggatgttcaaatatcactactcttt 393  Q
    ||||| ||||||||||||||||||||||| | || |||||||||||||||||||||||||||| |||||||||    
T  22390265 ccaatgaaaagagagagaaaagaagttgtcacaagagttgtctcaaatggatgttcaaatatctctactcttt 22390337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 321 - 390
Target Start/End: Complemental strand, 23344947 - 23344878
Alignment:
Q  321 ccaataaaaagagagagaaaagaagttgttaaaaaagttgtctcaaatggatgttcaaatatcactactc 390  Q
    ||||| ||||||||||||||||||||||| | || |||||||||||||| ||||||||||||||||||||    
T  23344947 ccaatgaaaagagagagaaaagaagttgtcagaagagttgtctcaaatgaatgttcaaatatcactactc 23344878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 321 - 391
Target Start/End: Complemental strand, 2013243 - 2013173
Alignment:
Q  321 ccaataaaaagagagagaaaagaagttgttaaaaaagttgtctcaaatggatgttcaaatatcactactct 391  Q
    ||||| ||||||||||||||| ||||||| | || |||||||||||||||||||| |||||||||||||||    
T  2013243 ccaatgaaaagagagagaaaataagttgtcacaagagttgtctcaaatggatgttaaaatatcactactct 2013173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 321 - 391
Target Start/End: Original strand, 42081150 - 42081220
Alignment:
Q  321 ccaataaaaagagagagaaaagaagttgttaaaaaagttgtctcaaatggatgttcaaatatcactactct 391  Q
    ||||| |||| ||||| ||||||||||||||||||| |||||||||||  |||||||||||||||||||||    
T  42081150 ccaatgaaaatagagaaaaaagaagttgttaaaaaaattgtctcaaattaatgttcaaatatcactactct 42081220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 321 - 390
Target Start/End: Original strand, 34442226 - 34442295
Alignment:
Q  321 ccaataaaaagagagagaaaagaagttgttaaaaaagttgtctcaaatggatgttcaaatatcactactc 390  Q
    ||||||||||||||||||||||| ||||| | |||| |||| |||||| |||||||||||||||||||||    
T  34442226 ccaataaaaagagagagaaaagaggttgtcagaaaaattgtttcaaatagatgttcaaatatcactactc 34442295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 321 - 393
Target Start/End: Complemental strand, 36376809 - 36376737
Alignment:
Q  321 ccaataaaaagagagagaaaagaagttgttaaaaaagttgtctcaaatggatgttcaaatatcactactcttt 393  Q
    ||||| |||||||||| ||||||||||||||||||| || |||||| | ||||||||||||||||| ||||||    
T  36376809 ccaatgaaaagagagaaaaaagaagttgttaaaaaaattatctcaattagatgttcaaatatcactcctcttt 36376737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 332 - 394
Target Start/End: Original strand, 44189949 - 44190011
Alignment:
Q  332 agagagaaaagaagttgttaaaaaagttgtctcaaatggatgttcaaatatcactactctttt 394  Q
    |||||||||||| ||||| | || ||||||||| |||||||||||||||||||||||||||||    
T  44189949 agagagaaaagatgttgtcacaagagttgtctcgaatggatgttcaaatatcactactctttt 44190011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 321 - 393
Target Start/End: Original strand, 3091854 - 3091926
Alignment:
Q  321 ccaataaaaagagagagaaaagaagttgttaaaaaagttgtctcaaatggatgttcaaatatcactactcttt 393  Q
    ||||| |||||||||| |||||||||||| | ||||||||| ||||||   ||||||||||||||||||||||    
T  3091854 ccaatgaaaagagagaaaaaagaagttgtcacaaaagttgtatcaaataattgttcaaatatcactactcttt 3091926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 321 - 393
Target Start/End: Original strand, 36133087 - 36133159
Alignment:
Q  321 ccaataaaaagagagagaaaagaagttgttaaaaaagttgtctcaaatggatgttcaaatatcactactcttt 393  Q
    ||||| |||||||||| |||||||||||| | ||||||||| | |||| | ||||||||||||||||||||||    
T  36133087 ccaatgaaaagagagaaaaaagaagttgtcacaaaagttgtatgaaatagttgttcaaatatcactactcttt 36133159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 321 - 391
Target Start/End: Complemental strand, 7086082 - 7086012
Alignment:
Q  321 ccaataaaaagagagagaaaagaagttgttaaaaaagttgtctcaaatggatgttcaaatatcactactct 391  Q
    ||||| ||||||||||||||| ||||||| | |||| |||||||| |||| |||||||||| |||||||||    
T  7086082 ccaatgaaaagagagagaaaataagttgtcacaaaaattgtctcatatggttgttcaaataacactactct 7086012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 321 - 391
Target Start/End: Complemental strand, 11164334 - 11164264
Alignment:
Q  321 ccaataaaaagagagagaaaagaagttgttaaaaaagttgtctcaaatggatgttcaaatatcactactct 391  Q
    ||||| |||||||||| |||||||||||| | ||||||||| |||||| | |||||||||||||| |||||    
T  11164334 ccaatgaaaagagagaaaaaagaagttgtcacaaaagttgtatcaaatagttgttcaaatatcaccactct 11164264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 321 - 391
Target Start/End: Original strand, 12962499 - 12962569
Alignment:
Q  321 ccaataaaaagagagagaaaagaagttgttaaaaaagttgtctcaaatggatgttcaaatatcactactct 391  Q
    ||||| |||||||||||||||||| |||||| |||| || | |||||| | ||||||||||||||||||||    
T  12962499 ccaattaaaagagagagaaaagaaattgttacaaaatttatatcaaatagttgttcaaatatcactactct 12962569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 321 - 386
Target Start/End: Original strand, 6365299 - 6365364
Alignment:
Q  321 ccaataaaaagagagagaaaagaagttgttaaaaaagttgtctcaaatggatgttcaaatatcact 386  Q
    |||||||||||||||| |||||| ||||| | ||||||||| | |||| |||||||||||||||||    
T  6365299 ccaataaaaagagagaaaaaagaggttgtcataaaagttgttttaaatagatgttcaaatatcact 6365364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 321 - 390
Target Start/End: Complemental strand, 11229279 - 11229210
Alignment:
Q  321 ccaataaaaagagagagaaaagaagttgttaaaaaagttgtctcaaatggatgttcaaatatcactactc 390  Q
    ||||| ||||| |||| ||||||||||||   ||||||||||| |||||| |||||||||||||||||||    
T  11229279 ccaatgaaaagtgagaaaaaagaagttgtaccaaaagttgtctaaaatggttgttcaaatatcactactc 11229210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 321 - 390
Target Start/End: Original strand, 29795549 - 29795618
Alignment:
Q  321 ccaataaaaagagagagaaaagaagttgttaaaaaagttgtctcaaatggatgttcaaatatcactactc 390  Q
    ||||| |||||||||| |||||  ||||| | ||||||||| |||||| |||||||||||||||||||||    
T  29795549 ccaatgaaaagagagaaaaaagtggttgtcacaaaagttgtttcaaattgatgttcaaatatcactactc 29795618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 323 - 395
Target Start/End: Complemental strand, 45693424 - 45693351
Alignment:
Q  323 aataaaaagagagagaaaagaagttgttaa-aaaagttgtctcaaatggatgttcaaatatcactactctttta 395  Q
    ||||||||||||||||||| ||| ||| |  |||||||||||||||||| |||| |||||||||||||| ||||    
T  45693424 aataaaaagagagagaaaaaaagctgtcattaaaagttgtctcaaatggttgtttaaatatcactactcattta 45693351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 321 - 393
Target Start/End: Original strand, 13711174 - 13711246
Alignment:
Q  321 ccaataaaaagagagagaaaagaagttgttaaaaaagttgtctcaaatggatgttcaaatatcactactcttt 393  Q
    ||||| |||||||||| |||||||||||| | |||||||||   |||| | ||||||||||||||||||||||    
T  13711174 ccaatgaaaagagagaaaaaagaagttgtcacaaaagttgtacaaaatagttgttcaaatatcactactcttt 13711246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 321 - 393
Target Start/End: Original strand, 32750111 - 32750183
Alignment:
Q  321 ccaataaaaagagagagaaaagaagttgttaaaaaagttgtctcaaatggatgttcaaatatcactactcttt 393  Q
    ||||| |||||||||| |||| ||||||| | |||| |||||||| |||| |||||||||| |||||||||||    
T  32750111 ccaatgaaaagagagaaaaaataagttgtcacaaaaattgtctcatatggttgttcaaataacactactcttt 32750183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 321 - 387
Target Start/End: Original strand, 12600161 - 12600227
Alignment:
Q  321 ccaataaaaagagagagaaaagaagttgttaaaaaagttgtctcaaatggatgttcaaatatcacta 387  Q
    ||||| |||||||||| |||||||||||| | ||||||||| | |||| | ||||||||||||||||    
T  12600161 ccaatgaaaagagagaaaaaagaagttgtcacaaaagttgtatgaaatagttgttcaaatatcacta 12600227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 322 - 384
Target Start/End: Original strand, 36435795 - 36435857
Alignment:
Q  322 caataaaaagagagagaaaagaagttgttaaaaaagttgtctcaaatggatgttcaaatatca 384  Q
    |||| ||||||||||||||||| ||||| | ||||||||| ||||||  ||||||||||||||    
T  36435795 caatgaaaagagagagaaaagaggttgtcacaaaagttgtttcaaataaatgttcaaatatca 36435857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 321 - 395
Target Start/End: Complemental strand, 43650505 - 43650431
Alignment:
Q  321 ccaataaaaagagagagaaaagaagttgttaaaaaagttgtctcaaatggatgttcaaatatcactactctttta 395  Q
    |||||||||||||||| ||||||| |||| | | ||||||| |||||||  |||| |||||||| ||||||||||    
T  43650505 ccaataaaaagagagaaaaaagaaattgtcacataagttgtatcaaatgattgtttaaatatcattactctttta 43650431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 321 - 394
Target Start/End: Original strand, 23045274 - 23045347
Alignment:
Q  321 ccaataaaaagagagagaaaagaagttgttaaaaaagttgtctcaaatggatgttcaaatatcactactctttt 394  Q
    ||||| |||| ||||| |||||||||||| | | |||||||||||  ||| |||||||||| ||||||||||||    
T  23045274 ccaatgaaaatagagaaaaaagaagttgtcacataagttgtctcatttggttgttcaaataacactactctttt 23045347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 321 - 386
Target Start/End: Complemental strand, 25801769 - 25801704
Alignment:
Q  321 ccaataaaaagagagagaaaagaagttgttaaaaaagttgtctcaaatggatgttcaaatatcact 386  Q
    ||||| |||||||||| |||||||||  | | |||||||||||||||| | |||||||||||||||    
T  25801769 ccaatgaaaagagagaaaaaagaagtgatcacaaaagttgtctcaaattgttgttcaaatatcact 25801704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 321 - 394
Target Start/End: Complemental strand, 31296801 - 31296728
Alignment:
Q  321 ccaataaaaagagagagaaaagaagttgttaaaaaagttgtctcaaatggatgttcaaatatcactactctttt 394  Q
    ||||| |||||||||| ||||||| |||| | | |||||||| || |||| | |||||||||||||||||||||    
T  31296801 ccaatgaaaagagagaaaaaagaaattgtcacataagttgtcccatatggttattcaaatatcactactctttt 31296728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 355 - 391
Target Start/End: Original strand, 15141597 - 15141633
Alignment:
Q  355 aagttgtctcaaatggatgttcaaatatcactactct 391  Q
    |||||||||||||||||||||||||| ||||||||||    
T  15141597 aagttgtctcaaatggatgttcaaatgtcactactct 15141633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 216 - 252
Target Start/End: Complemental strand, 22353238 - 22353202
Alignment:
Q  216 atagagaaatgatatttgtacaatcactttgtgacaa 252  Q
    |||||||||||||||||||||||||| ||||||||||    
T  22353238 atagagaaatgatatttgtacaatcattttgtgacaa 22353202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 321 - 385
Target Start/End: Original strand, 43725318 - 43725382
Alignment:
Q  321 ccaataaaaagagagagaaaagaagttgttaaaaaagttgtctcaaatggatgttcaaatatcac 385  Q
    ||||| ||||| |||| ||||||||||||   ||||||||||| |||||| ||||||||||||||    
T  43725318 ccaatgaaaagtgagaaaaaagaagttgtaccaaaagttgtctaaaatggttgttcaaatatcac 43725382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 217 - 252
Target Start/End: Original strand, 6365184 - 6365219
Alignment:
Q  217 tagagaaatgatatttgtacaatcactttgtgacaa 252  Q
    |||||||||||||||||||||| |||||||||||||    
T  6365184 tagagaaatgatatttgtacaaccactttgtgacaa 6365219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 321 - 391
Target Start/End: Complemental strand, 10550417 - 10550346
Alignment:
Q  321 ccaataaaaagagagagaaaagaagttgttaaaaaagttgtc-tcaaatggatgttcaaatatcactactct 391  Q
    |||||||||| ||||| |||  ||||||| || ||||||||| |||||||||||| ||||||||| ||||||    
T  10550417 ccaataaaaatagagaaaaacaaagttgtcaacaaagttgtcatcaaatggatgtccaaatatcattactct 10550346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 327 - 387
Target Start/End: Complemental strand, 25270743 - 25270691
Alignment:
Q  327 aaaagagagagaaaagaagttgttaaaaaagttgtctcaaatggatgttcaaatatcacta 387  Q
    ||||||||||||||||||||||||        |||||||||||||||||||||||||||||    
T  25270743 aaaagagagagaaaagaagttgtt--------tgtctcaaatggatgttcaaatatcacta 25270691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 321 - 392
Target Start/End: Complemental strand, 42251878 - 42251807
Alignment:
Q  321 ccaataaaaagagagagaaaagaagttgttaaaaaagttgtctcaaatggatgttcaaatatcactactctt 392  Q
    ||||| |||||||||| |||||||||||| | | |||||||  ||||||  |||| ||||||||||||||||    
T  42251878 ccaatgaaaagagagaaaaaagaagttgtcacataagttgttccaaatgattgtttaaatatcactactctt 42251807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 343 - 393
Target Start/End: Original strand, 2464272 - 2464322
Alignment:
Q  343 aagttgttaaaaaagttgtctcaaatggatgttcaaatatcactactcttt 393  Q
    ||||||| | ||||||||| |||||||||||||||||||||| | ||||||    
T  2464272 aagttgtcacaaaagttgtatcaaatggatgttcaaatatcatttctcttt 2464322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 218 - 252
Target Start/End: Complemental strand, 4738644 - 4738610
Alignment:
Q  218 agagaaatgatatttgtacaatcactttgtgacaa 252  Q
    ||||||||||||||||||||| |||||||||||||    
T  4738644 agagaaatgatatttgtacaaccactttgtgacaa 4738610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 218 - 252
Target Start/End: Complemental strand, 5167814 - 5167780
Alignment:
Q  218 agagaaatgatatttgtacaatcactttgtgacaa 252  Q
    ||||||||||||||||||||| |||||||||||||    
T  5167814 agagaaatgatatttgtacaaccactttgtgacaa 5167780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 321 - 387
Target Start/End: Complemental strand, 6639430 - 6639364
Alignment:
Q  321 ccaataaaaagagagagaaaagaagttgttaaaaaagttgtctcaaatggatgttcaaatatcacta 387  Q
    ||||| ||||||||||||||||||||||| | | ||||| |||||  ||| |||||||||| |||||    
T  6639430 ccaatgaaaagagagagaaaagaagttgtcacataagttatctcatttggttgttcaaataacacta 6639364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 321 - 386
Target Start/End: Complemental strand, 15019102 - 15019036
Alignment:
Q  321 ccaataaaaagagagagaaaagaagttgttaa-aaaagttgtctcaaatggatgttcaaatatcact 386  Q
    |||||||||| ||||| |||| ||||||| |  |||||||| ||||||||| |||||||||||||||    
T  15019102 ccaataaaaaaagagaaaaaaaaagttgtcatcaaaagttgcctcaaatggttgttcaaatatcact 15019036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 218 - 252
Target Start/End: Complemental strand, 15283322 - 15283288
Alignment:
Q  218 agagaaatgatatttgtacaatcactttgtgacaa 252  Q
    ||||||||||||||||||||| |||||||||||||    
T  15283322 agagaaatgatatttgtacaaccactttgtgacaa 15283288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 218 - 252
Target Start/End: Complemental strand, 19695752 - 19695718
Alignment:
Q  218 agagaaatgatatttgtacaatcactttgtgacaa 252  Q
    |||||||||||||||||||||||||||| ||||||    
T  19695752 agagaaatgatatttgtacaatcactttttgacaa 19695718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 218 - 252
Target Start/End: Complemental strand, 27307303 - 27307269
Alignment:
Q  218 agagaaatgatatttgtacaatcactttgtgacaa 252  Q
    |||||||||||||||||||||||| ||||||||||    
T  27307303 agagaaatgatatttgtacaatcaatttgtgacaa 27307269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 218 - 252
Target Start/End: Complemental strand, 33296143 - 33296109
Alignment:
Q  218 agagaaatgatatttgtacaatcactttgtgacaa 252  Q
    ||||||||||||||||||||| |||||||||||||    
T  33296143 agagaaatgatatttgtacaaccactttgtgacaa 33296109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 218 - 252
Target Start/End: Original strand, 36132973 - 36133007
Alignment:
Q  218 agagaaatgatatttgtacaatcactttgtgacaa 252  Q
    ||||||||||||||||||||| |||||||||||||    
T  36132973 agagaaatgatatttgtacaaccactttgtgacaa 36133007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 321 - 391
Target Start/End: Complemental strand, 39454205 - 39454135
Alignment:
Q  321 ccaataaaaagagagagaaaagaagttgttaaaaaagttgtctcaaatggatgttcaaatatcactactct 391  Q
    ||||| |||||||||| ||||||  ||||   |||| |||| |||||| ||||||||||||||||||||||    
T  39454205 ccaatgaaaagagagaaaaaagagattgtctcaaaacttgtttcaaatagatgttcaaatatcactactct 39454135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 218 - 252
Target Start/End: Complemental strand, 42283311 - 42283277
Alignment:
Q  218 agagaaatgatatttgtacaatcactttgtgacaa 252  Q
    ||||||||||||||||||||| |||||||||||||    
T  42283311 agagaaatgatatttgtacaaccactttgtgacaa 42283277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 329 - 390
Target Start/End: Complemental strand, 1876302 - 1876241
Alignment:
Q  329 aagagagagaaaagaagttgttaaaaaagttgtctcaaatggatgttcaaatatcactactc 390  Q
    |||| ||| |||||||||||| | ||||||||||||| |||| |||| ||||| ||||||||    
T  1876302 aagatagaaaaaagaagttgtcacaaaagttgtctcatatggttgttgaaataacactactc 1876241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 219 - 252
Target Start/End: Complemental strand, 3196158 - 3196125
Alignment:
Q  219 gagaaatgatatttgtacaatcactttgtgacaa 252  Q
    ||||||||||||||||||||||| ||||||||||    
T  3196158 gagaaatgatatttgtacaatcaatttgtgacaa 3196125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 321 - 390
Target Start/End: Complemental strand, 5067599 - 5067531
Alignment:
Q  321 ccaataaaaagagagagaaaagaagttgttaaaaaagttgtctcaaatggatgttcaaatatcactactc 390  Q
    ||||| ||||| |||| ||||||||||| | |||| ||||||| |||||  |||||||||||||||||||    
T  5067599 ccaatgaaaagtgagaaaaaagaagttgatcaaaa-gttgtctaaaatgattgttcaaatatcactactc 5067531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 219 - 252
Target Start/End: Original strand, 10216864 - 10216897
Alignment:
Q  219 gagaaatgatatttgtacaatcactttgtgacaa 252  Q
    ||||||||||||||||||||||||||| ||||||    
T  10216864 gagaaatgatatttgtacaatcactttttgacaa 10216897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 216 - 249
Target Start/End: Original strand, 13553144 - 13553177
Alignment:
Q  216 atagagaaatgatatttgtacaatcactttgtga 249  Q
    ||||||||||||||||||||||| ||||||||||    
T  13553144 atagagaaatgatatttgtacaaccactttgtga 13553177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 321 - 390
Target Start/End: Complemental strand, 14140297 - 14140228
Alignment:
Q  321 ccaataaaaagagagagaaaagaagttgttaaaaaagttgtctcaaatggatgttcaaatatcactactc 390  Q
    ||||| |||||||||| ||||||| |||| | ||||||| | | |||||  |||||||||||||||||||    
T  14140297 ccaatgaaaagagagaaaaaagaaattgtcacaaaagttattttaaatgattgttcaaatatcactactc 14140228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 321 - 390
Target Start/End: Original strand, 23880208 - 23880277
Alignment:
Q  321 ccaataaaaagagagagaaaagaagttgttaaaaaagttgtctcaaatggatgttcaaatatcactactc 390  Q
    ||||| |||||||||| |||| || |||| | ||||||||||||| |||| |||||||||| || |||||    
T  23880208 ccaatgaaaagagagaaaaaataaattgtcataaaagttgtctcatatggttgttcaaataacattactc 23880277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 219 - 252
Target Start/End: Original strand, 30856807 - 30856840
Alignment:
Q  219 gagaaatgatatttgtacaatcactttgtgacaa 252  Q
    |||||||||||||||||||| |||||||||||||    
T  30856807 gagaaatgatatttgtacaaccactttgtgacaa 30856840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 211 - 252
Target Start/End: Complemental strand, 31227629 - 31227588
Alignment:
Q  211 tttagatagagaaatgatatttgtacaatcactttgtgacaa 252  Q
    ||||| |||||||||||||| |||||||||||||| ||||||    
T  31227629 tttagttagagaaatgatatgtgtacaatcactttttgacaa 31227588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 211 - 252
Target Start/End: Complemental strand, 34144630 - 34144589
Alignment:
Q  211 tttagatagagaaatgatatttgtacaatcactttgtgacaa 252  Q
    |||||| ||||||||||||||||||||| || ||||||||||    
T  34144630 tttagaaagagaaatgatatttgtacaaccaatttgtgacaa 34144589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 219 - 252
Target Start/End: Original strand, 36435681 - 36435714
Alignment:
Q  219 gagaaatgatatttgtacaatcactttgtgacaa 252  Q
    |||||||||||||||||||| |||||||||||||    
T  36435681 gagaaatgatatttgtacaaccactttgtgacaa 36435714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 321 - 390
Target Start/End: Complemental strand, 36909801 - 36909732
Alignment:
Q  321 ccaataaaaagagagagaaaagaagttgttaaaaaagttgtctcaaatggatgttcaaatatcactactc 390  Q
    ||||||| |||||||| |||  ||||||| |  |||||||| | |||||||||| |||||||||||||||    
T  36909801 ccaataagaagagagaaaaacaaagttgtcatcaaagttgtatgaaatggatgtacaaatatcactactc 36909732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 211 - 252
Target Start/End: Complemental strand, 36909922 - 36909881
Alignment:
Q  211 tttagatagagaaatgatatttgtacaatcactttgtgacaa 252  Q
    |||| ||||||||||||||||||||||| || ||||||||||    
T  36909922 tttatatagagaaatgatatttgtacaaccattttgtgacaa 36909881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 219 - 252
Target Start/End: Original strand, 41040266 - 41040299
Alignment:
Q  219 gagaaatgatatttgtacaatcactttgtgacaa 252  Q
    |||||||||||||||||||| |||||||||||||    
T  41040266 gagaaatgatatttgtacaaccactttgtgacaa 41040299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 58; Significance: 8e-24; HSPs: 44)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 58; E-Value: 8e-24
Query Start/End: Original strand, 321 - 390
Target Start/End: Original strand, 5378740 - 5378809
Alignment:
Q  321 ccaataaaaagagagagaaaagaagttgttaaaaaagttgtctcaaatggatgttcaaatatcactactc 390  Q
    ||||| |||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||    
T  5378740 ccaatgaaaagagagagaaaagaaattgttaaaaaagttgtctcaaatggatgtttaaatatcactactc 5378809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 321 - 392
Target Start/End: Complemental strand, 34348985 - 34348914
Alignment:
Q  321 ccaataaaaagagagagaaaagaagttgttaaaaaagttgtctcaaatggatgttcaaatatcactactctt 392  Q
    ||||| ||||||||||||||||||||||||||||||||||| | |||| |||||||||||||||||||||||    
T  34348985 ccaatgaaaagagagagaaaagaagttgttaaaaaagttgtatgaaatagatgttcaaatatcactactctt 34348914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 321 - 390
Target Start/End: Complemental strand, 44894432 - 44894363
Alignment:
Q  321 ccaataaaaagagagagaaaagaagttgttaaaaaagttgtctcaaatggatgttcaaatatcactactc 390  Q
    ||||| |||||||||| |||||||||||| | |||| || ||||||||||||||||||||||||||||||    
T  44894432 ccaatgaaaagagagataaaagaagttgtcacaaaaattatctcaaatggatgttcaaatatcactactc 44894363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 678 - 815
Target Start/End: Original strand, 24464374 - 24464507
Alignment:
Q  678 gaagaagatggaagagaaatgagtttttaatttgaatttttcttgattaccagccttttttaaaattcagtccctctggtaatttccgtttttggatttg 777  Q
    ||||||||||||||||||||| |||| |||||||||||||||||||||  |  || ||||  ||||| ||||| || ||||||||  |||||||||||||    
T  24464374 gaagaagatggaagagaaatgggtttctaatttgaatttttcttgatttgc--ccgtttt--aaatttagtccatccggtaatttttgtttttggatttg 24464469  T
Q  778 gcccattaaacctggtgactggtcacatggatagacac 815  Q
    | |  ||||||   | ||| ||||||||||||||||||    
T  24464470 gtcgcttaaacagagagaccggtcacatggatagacac 24464507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 327 - 394
Target Start/End: Complemental strand, 48866882 - 48866815
Alignment:
Q  327 aaaagagagagaaaagaagttgttaaaaaagttgtctcaaatggatgttcaaatatcactactctttt 394  Q
    |||||||||| |||||| ||||| | ||||||||| |||||| |||||||||||||||||||||||||    
T  48866882 aaaagagagaaaaaagaggttgtcacaaaagttgtttcaaatagatgttcaaatatcactactctttt 48866815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 328 - 390
Target Start/End: Original strand, 10591272 - 10591334
Alignment:
Q  328 aaagagagagaaaagaagttgttaaaaaagttgtctcaaatggatgttcaaatatcactactc 390  Q
    |||| |||| |||||||||||| | |||||||||||||||||| |||||||||||||||||||    
T  10591272 aaagtgagaaaaaagaagttgtcacaaaagttgtctcaaatggttgttcaaatatcactactc 10591334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 321 - 390
Target Start/End: Complemental strand, 40717197 - 40717127
Alignment:
Q  321 ccaataaaaagagagagaaaagaagttgtta-aaaaagttgtctcaaatggatgttcaaatatcactactc 390  Q
    |||||||||||||||| |||||||||||| | |||||||||| | |||||| |||||||||||||||||||    
T  40717197 ccaataaaaagagagaaaaaagaagttgtcacaaaaagttgtatgaaatggttgttcaaatatcactactc 40717127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 321 - 392
Target Start/End: Complemental strand, 37351948 - 37351877
Alignment:
Q  321 ccaataaaaagagagagaaaagaagttgttaaaaaagttgtctcaaatggatgttcaaatatcactactctt 392  Q
    |||||||||||||||| ||||||| |||| | ||||||| | |||||||  |||||||||||||||||||||    
T  37351948 ccaataaaaagagagaaaaaagaaattgtcacaaaagttatatcaaatgattgttcaaatatcactactctt 37351877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 321 - 390
Target Start/End: Original strand, 2790290 - 2790360
Alignment:
Q  321 ccaataaaaagagagagaaaagaagttgttaaaaaagttgtctcaaatg-gatgttcaaatatcactactc 390  Q
    ||||| ||||||||||||||||||||||| | | ||||||||| ||||| | |||||||||||||||||||    
T  2790290 ccaatgaaaagagagagaaaagaagttgtcacataagttgtctaaaatgagttgttcaaatatcactactc 2790360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 332 - 389
Target Start/End: Original strand, 7990197 - 7990254
Alignment:
Q  332 agagagaaaagaagttgttaaaaaagttgtctcaaatggatgttcaaatatcactact 389  Q
    ||||||| |||||||||| | || |||||||||||||| |||||||||||||||||||    
T  7990197 agagagagaagaagttgtcacaacagttgtctcaaatgaatgttcaaatatcactact 7990254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 321 - 390
Target Start/End: Original strand, 12141997 - 12142066
Alignment:
Q  321 ccaataaaaagagagagaaaagaagttgttaaaaaagttgtctcaaatggatgttcaaatatcactactc 390  Q
    ||||| |||||| ||| |||| ||||||| | ||||||||| |||||||| |||||||||||||||||||    
T  12141997 ccaatgaaaagaaagaaaaaaaaagttgtcacaaaagttgtatcaaatggttgttcaaatatcactactc 12142066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 321 - 390
Target Start/End: Original strand, 25887696 - 25887765
Alignment:
Q  321 ccaataaaaagagagagaaaagaagttgttaaaaaagttgtctcaaatggatgttcaaatatcactactc 390  Q
    ||||| ||||| |||| ||||||||||||   ||||||||||| |||||| |||||||||||||||||||    
T  25887696 ccaatgaaaagtgagaaaaaagaagttgtaccaaaagttgtctaaaatggttgttcaaatatcactactc 25887765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 321 - 393
Target Start/End: Original strand, 43445520 - 43445592
Alignment:
Q  321 ccaataaaaagagagagaaaagaagttgttaaaaaagttgtctcaaatggatgttcaaatatcactactcttt 393  Q
    |||||||||||| ||| ||||||| |||| | |||| |||| |||||||  ||||||||||||||||||||||    
T  43445520 ccaataaaaagaaagaaaaaagaaattgtcacaaaaattgtatcaaatgattgttcaaatatcactactcttt 43445592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 321 - 392
Target Start/End: Complemental strand, 155939 - 155868
Alignment:
Q  321 ccaataaaaagagagagaaaagaagttgttaaaaaagttgtctcaaatggatgttcaaatatcactactctt 392  Q
    ||||| |||||  ||| ||||||||||||   ||||||||||| |||||| |||||||||||||||||||||    
T  155939 ccaatgaaaagtaagaaaaaagaagttgtatcaaaagttgtctaaaatggttgttcaaatatcactactctt 155868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 332 - 393
Target Start/End: Original strand, 7807178 - 7807240
Alignment:
Q  332 agagagaaaagaagttgttaa-aaaagttgtctcaaatggatgttcaaatatcactactcttt 393  Q
    |||||||||||||||||| |  ||||||||| | |||||| ||||||||||||||||||||||    
T  7807178 agagagaaaagaagttgtcatcaaaagttgtatgaaatggttgttcaaatatcactactcttt 7807240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 332 - 394
Target Start/End: Complemental strand, 8792546 - 8792485
Alignment:
Q  332 agagagaaaagaagttgttaaaaaagttgtctcaaatggatgttcaaatatcactactctttt 394  Q
    |||||||||| ||||||| | ||||||||| |||||||| ||||||||||||| |||||||||    
T  8792546 agagagaaaa-aagttgtcacaaaagttgtatcaaatggttgttcaaatatcattactctttt 8792485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 322 - 392
Target Start/End: Complemental strand, 19510314 - 19510244
Alignment:
Q  322 caataaaaagagagagaaaagaagttgttaaaaaagttgtctcaaatggatgttcaaatatcactactctt 392  Q
    |||| |||||||||| |||| ||||||||| ||||||||||| | |||  |||||||||| ||||||||||    
T  19510314 caatgaaaagagagaaaaaataagttgttacaaaagttgtcttatatgattgttcaaataacactactctt 19510244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 321 - 390
Target Start/End: Original strand, 5978692 - 5978761
Alignment:
Q  321 ccaataaaaagagagagaaaagaagttgttaaaaaagttgtctcaaatggatgttcaaatatcactactc 390  Q
    ||||| |||||||||| || ||||||||| | || |||||| ||| |||| |||||||||||||||||||    
T  5978692 ccaatgaaaagagagaaaatagaagttgtcacaagagttgtatcatatggttgttcaaatatcactactc 5978761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 321 - 394
Target Start/End: Original strand, 46651785 - 46651858
Alignment:
Q  321 ccaataaaaagagagagaaaagaagttgttaaaaaagttgtctcaaatggatgttcaaatatcactactctttt 394  Q
    ||||| |||||||||| || ||||||||| | || | |||| ||| |||| |||||||||||||||||||||||    
T  46651785 ccaatgaaaagagagaaaatagaagttgtcacaagaattgtatcatatggttgttcaaatatcactactctttt 46651858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 327 - 391
Target Start/End: Original strand, 30180626 - 30180690
Alignment:
Q  327 aaaagagagagaaaagaagttgttaaaaaagttgtctcaaatggatgttcaaatatcactactct 391  Q
    |||||||||| |||||| |||||   |||| |||| |||||| ||||||||||||||||||||||    
T  30180626 aaaagagagaaaaaagaggttgtcgcaaaaattgtttcaaatagatgttcaaatatcactactct 30180690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 321 - 389
Target Start/End: Original strand, 47193040 - 47193108
Alignment:
Q  321 ccaataaaaagagagagaaaagaagttgttaaaaaagttgtctcaaatggatgttcaaatatcactact 389  Q
    ||||| ||||| |||| ||||||||||||   ||||||| ||| |||||| ||||||||||||||||||    
T  47193040 ccaatgaaaagtgagaaaaaagaagttgtaccaaaagttatctaaaatggttgttcaaatatcactact 47193108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 327 - 387
Target Start/End: Original strand, 7701441 - 7701493
Alignment:
Q  327 aaaagagagagaaaagaagttgttaaaaaagttgtctcaaatggatgttcaaatatcacta 387  Q
    ||||||||||||||||||||||||        |||||||||||||||||||||||||||||    
T  7701441 aaaagagagagaaaagaagttgtt--------tgtctcaaatggatgttcaaatatcacta 7701493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 217 - 252
Target Start/End: Complemental strand, 27164910 - 27164875
Alignment:
Q  217 tagagaaatgatatttgtacaatcactttgtgacaa 252  Q
    ||||||||||||||||||||||||| ||||||||||    
T  27164910 tagagaaatgatatttgtacaatcaatttgtgacaa 27164875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 321 - 392
Target Start/End: Original strand, 45607137 - 45607208
Alignment:
Q  321 ccaataaaaagagagagaaaagaagttgttaaaaaagttgtctcaaatggatgttcaaatatcactactctt 392  Q
    ||||| ||||| |||| ||||||||||||   ||||||| ||| |||| | |||||||||||||||||||||    
T  45607137 ccaatgaaaagtgagaaaaaagaagttgtaccaaaagttatctaaaatagttgttcaaatatcactactctt 45607208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 327 - 387
Target Start/End: Complemental strand, 46022428 - 46022376
Alignment:
Q  327 aaaagagagagaaaagaagttgttaaaaaagttgtctcaaatggatgttcaaatatcacta 387  Q
    ||||||||||||||||||||||||        |||||||||||||||||||||||||||||    
T  46022428 aaaagagagagaaaagaagttgtt--------tgtctcaaatggatgttcaaatatcacta 46022376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 218 - 252
Target Start/End: Original strand, 2469702 - 2469736
Alignment:
Q  218 agagaaatgatatttgtacaatcactttgtgacaa 252  Q
    ||||||||||||||||||||| |||||||||||||    
T  2469702 agagaaatgatatttgtacaaccactttgtgacaa 2469736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 218 - 252
Target Start/End: Complemental strand, 22330692 - 22330658
Alignment:
Q  218 agagaaatgatatttgtacaatcactttgtgacaa 252  Q
    ||||||||||||||||||||| |||||||||||||    
T  22330692 agagaaatgatatttgtacaaccactttgtgacaa 22330658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 321 - 391
Target Start/End: Original strand, 33684793 - 33684863
Alignment:
Q  321 ccaataaaaagagagagaaaagaagttgttaaaaaagttgtctcaaatggatgttcaaatatcactactct 391  Q
    ||||| |||||| ||| |||||||||||| | ||||||||| ||| || | |||||||||| |||||||||    
T  33684793 ccaatgaaaagatagaaaaaagaagttgtcacaaaagttgtttcatatagttgttcaaataacactactct 33684863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 218 - 252
Target Start/End: Complemental strand, 37352051 - 37352017
Alignment:
Q  218 agagaaatgatatttgtacaatcactttgtgacaa 252  Q
    ||||||||||||||||||||| |||||||||||||    
T  37352051 agagaaatgatatttgtacaaccactttgtgacaa 37352017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 218 - 252
Target Start/End: Original strand, 41966331 - 41966365
Alignment:
Q  218 agagaaatgatatttgtacaatcactttgtgacaa 252  Q
    ||||||||||||||||||||| |||||||||||||    
T  41966331 agagaaatgatatttgtacaaccactttgtgacaa 41966365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 321 - 391
Target Start/End: Original strand, 41966441 - 41966511
Alignment:
Q  321 ccaataaaaagagagagaaaagaagttgttaaaaaagttgtctcaaatggatgttcaaatatcactactct 391  Q
    ||||||||||  |||| |||||||||||| | |||| |||| | |||| | ||||||||||||||||||||    
T  41966441 ccaataaaaactgagaaaaaagaagttgtcataaaaattgtttaaaatagttgttcaaatatcactactct 41966511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 218 - 252
Target Start/End: Complemental strand, 41985161 - 41985127
Alignment:
Q  218 agagaaatgatatttgtacaatcactttgtgacaa 252  Q
    |||||||||||||||||||||||| ||||||||||    
T  41985161 agagaaatgatatttgtacaatcaatttgtgacaa 41985127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 321 - 389
Target Start/End: Original strand, 4182519 - 4182588
Alignment:
Q  321 ccaataaaaagagagagaaaagaagttgtta-aaaaagttgtctcaaatggatgttcaaatatcactact 389  Q
    ||||||||||||||||||||| ||||||| |  ||||||| ||| |||||| |||| |||||||| ||||    
T  4182519 ccaataaaaagagagagaaaataagttgtcaccaaaagttatcttaaatggttgttaaaatatcattact 4182588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 321 - 378
Target Start/End: Complemental strand, 12102667 - 12102610
Alignment:
Q  321 ccaataaaaagagagagaaaagaagttgttaaaaaagttgtctcaaatggatgttcaa 378  Q
    ||||| |||||||||| |||| ||||||| | ||||||||||| |||||| |||||||    
T  12102667 ccaatgaaaagagagaaaaaataagttgtcacaaaagttgtctgaaatggttgttcaa 12102610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 219 - 252
Target Start/End: Complemental strand, 29162350 - 29162317
Alignment:
Q  219 gagaaatgatatttgtacaatcactttgtgacaa 252  Q
    ||||||||||||||||||||||| ||||||||||    
T  29162350 gagaaatgatatttgtacaatcaatttgtgacaa 29162317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 355 - 392
Target Start/End: Original strand, 29355479 - 29355516
Alignment:
Q  355 aagttgtctcaaatggatgttcaaatatcactactctt 392  Q
    ||||||||| |||||| |||||||||||||||||||||    
T  29355479 aagttgtcttaaatggttgttcaaatatcactactctt 29355516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 219 - 252
Target Start/End: Original strand, 31982057 - 31982090
Alignment:
Q  219 gagaaatgatatttgtacaatcactttgtgacaa 252  Q
    |||||||||||||||||||| |||||||||||||    
T  31982057 gagaaatgatatttgtacaaccactttgtgacaa 31982090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 321 - 390
Target Start/End: Complemental strand, 37856139 - 37856070
Alignment:
Q  321 ccaataaaaagagagagaaaagaagttgttaaaaaagttgtctcaaatggatgttcaaatatcactactc 390  Q
    ||||| |||||||||| ||||||  || | | ||||||||| |||||| |||||| ||||||||||||||    
T  37856139 ccaatgaaaagagagaaaaaagagattatcacaaaagttgtttcaaatagatgtttaaatatcactactc 37856070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 219 - 252
Target Start/End: Original strand, 41080126 - 41080159
Alignment:
Q  219 gagaaatgatatttgtacaatcactttgtgacaa 252  Q
    ||||||||||||||||||||||| ||||||||||    
T  41080126 gagaaatgatatttgtacaatcattttgtgacaa 41080159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 327 - 368
Target Start/End: Original strand, 43025926 - 43025967
Alignment:
Q  327 aaaagagagagaaaagaagttgttaaaaaagttgtctcaaat 368  Q
    |||||||||| |||||||||||||| ||||||||| ||||||    
T  43025926 aaaagagagaaaaaagaagttgttacaaaagttgtatcaaat 43025967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 216 - 249
Target Start/End: Complemental strand, 43079706 - 43079673
Alignment:
Q  216 atagagaaatgatatttgtacaatcactttgtga 249  Q
    ||||||||||||||||||||||| ||||||||||    
T  43079706 atagagaaatgatatttgtacaaccactttgtga 43079673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 321 - 392
Target Start/End: Original strand, 43260102 - 43260175
Alignment:
Q  321 ccaataaaaagagagagaaaa-gaagttgttaa-aaaagttgtctcaaatggatgttcaaatatcactactctt 392  Q
    ||||| ||||||||||||||| |||||||| |  ||||||||| | |||||| ||||||||||| |||||||||    
T  43260102 ccaattaaaagagagagaaaaagaagttgtcatcaaaagttgtatgaaatggttgttcaaatatgactactctt 43260175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 351 - 392
Target Start/End: Original strand, 43657145 - 43657186
Alignment:
Q  351 aaaaaagttgtctcaaatggatgttcaaatatcactactctt 392  Q
    ||||||||||| | |||||| |||||||||||||||||||||    
T  43657145 aaaaaagttgtatgaaatggttgttcaaatatcactactctt 43657186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 321 - 389
Target Start/End: Original strand, 45432057 - 45432125
Alignment:
Q  321 ccaataaaaagagagagaaaagaagttgttaaaaaagttgtctcaaatg-gatgttcaaatatcactact 389  Q
    |||||||||| ||||| |||||||||||| | | ||||||||| ||||| | ||||||||||||||||||    
T  45432057 ccaataaaaa-agagaaaaaagaagttgtcacataagttgtctaaaatgagttgttcaaatatcactact 45432125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 58; Significance: 8e-24; HSPs: 46)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 58; E-Value: 8e-24
Query Start/End: Original strand, 321 - 390
Target Start/End: Original strand, 40610342 - 40610411
Alignment:
Q  321 ccaataaaaagagagagaaaagaagttgttaaaaaagttgtctcaaatggatgttcaaatatcactactc 390  Q
    ||||| ||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||    
T  40610342 ccaatgaaaagagagagaaaagaagttgtcacaaaagttgtctcaaatggatgttcaaatatcactactc 40610411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 58; E-Value: 8e-24
Query Start/End: Original strand, 678 - 815
Target Start/End: Original strand, 46605648 - 46605784
Alignment:
Q  678 gaagaagatggaagagaaatgagtttttaatttgaatttttcttgattaccagccttttttaaaattcagtccctctggtaatttccgtttttggatttg 777  Q
    ||||||||||||||||||||  ||||||||||| |||||||| ||| |||| | |||||||   ||| ||||||||| ||||||| ||||||||||||||    
T  46605648 gaagaagatggaagagaaattggtttttaatttaaatttttcgtgactacc-gtctttttttggatttagtccctctcgtaattttcgtttttggatttg 46605746  T
Q  778 gcccattaaacctggtgactggtcacatggatagacac 815  Q
    | || || ||  |||||||||||||||||||| |||||    
T  46605747 gtcctttgaatatggtgactggtcacatggatggacac 46605784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 55; E-Value: 5e-22
Query Start/End: Original strand, 332 - 390
Target Start/End: Complemental strand, 7645501 - 7645443
Alignment:
Q  332 agagagaaaagaagttgttaaaaaagttgtctcaaatggatgttcaaatatcactactc 390  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  7645501 agagagaaaagaagttgttaaaaaaattgtctcaaatggatgttcaaatatcactactc 7645443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 321 - 391
Target Start/End: Original strand, 46948092 - 46948162
Alignment:
Q  321 ccaataaaaagagagagaaaagaagttgttaaaaaagttgtctcaaatggatgttcaaatatcactactct 391  Q
    ||||| |||||| |||||||||||||||| | || ||||||||||||||||||||||||||||||||||||    
T  46948092 ccaatgaaaagatagagaaaagaagttgtcacaagagttgtctcaaatggatgttcaaatatcactactct 46948162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 321 - 392
Target Start/End: Original strand, 28253128 - 28253199
Alignment:
Q  321 ccaataaaaagagagagaaaagaagttgttaaaaaagttgtctcaaatggatgttcaaatatcactactctt 392  Q
    ||||| ||||||||||||||||||||||||| ||||||||||||| |||| |||||||||| ||| ||||||    
T  28253128 ccaatgaaaagagagagaaaagaagttgttacaaaagttgtctcatatggttgttcaaataacaccactctt 28253199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 321 - 385
Target Start/End: Complemental strand, 31817353 - 31817289
Alignment:
Q  321 ccaataaaaagagagagaaaagaagttgttaaaaaagttgtctcaaatggatgttcaaatatcac 385  Q
    ||||| |||| | ||| ||||||| ||||||||||| ||||||||||||||||||||||||||||    
T  31817353 ccaatgaaaataaagaaaaaagaaattgttaaaaaaattgtctcaaatggatgttcaaatatcac 31817289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 322 - 386
Target Start/End: Complemental strand, 50061933 - 50061869
Alignment:
Q  322 caataaaaagagagagaaaagaagttgttaaaaaagttgtctcaaatggatgttcaaatatcact 386  Q
    |||||||||||||||||||||||||||||| || | |||| ||||||  ||||||||||||||||    
T  50061933 caataaaaagagagagaaaagaagttgttataagaattgtttcaaataaatgttcaaatatcact 50061869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 321 - 392
Target Start/End: Complemental strand, 50659150 - 50659079
Alignment:
Q  321 ccaataaaaagagagagaaaagaagttgttaaaaaagttgtctcaaatggatgttcaaatatcactactctt 392  Q
    ||||| ||||||||||||||||||||||| | | ||||||| ||| |||| |||||||||| ||||||||||    
T  50659150 ccaatgaaaagagagagaaaagaagttgtcacataagttgtttcatatggttgttcaaataacactactctt 50659079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 321 - 391
Target Start/End: Complemental strand, 30631803 - 30631733
Alignment:
Q  321 ccaataaaaagagagagaaaagaagttgttaaaaaagttgtctcaaatggatgttcaaatatcactactct 391  Q
    ||||| ||||| |||| ||||||||||||   ||||||||||| |||||| ||||||||||||||||||||    
T  30631803 ccaatgaaaagtgagaaaaaagaagttgtaccaaaagttgtctaaaatggttgttcaaatatcactactct 30631733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 321 - 391
Target Start/End: Original strand, 39010927 - 39010997
Alignment:
Q  321 ccaataaaaagagagagaaaagaagttgttaaaaaagttgtctcaaatggatgttcaaatatcactactct 391  Q
    ||||| |||||||||| |||| ||||||| | ||||||||||||| |||| |||||||||| |||||||||    
T  39010927 ccaatgaaaagagagaaaaaataagttgtcacaaaagttgtctcatatggttgttcaaataacactactct 39010997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 321 - 390
Target Start/End: Original strand, 2362482 - 2362551
Alignment:
Q  321 ccaataaaaagagagagaaaagaagttgttaaaaaagttgtctcaaatggatgttcaaatatcactactc 390  Q
    ||||| |||| |||||||||||||||||| | |||| |||| |||||| | |||||||||||||||||||    
T  2362482 ccaatgaaaaaagagagaaaagaagttgtcacaaaaattgtatcaaatagttgttcaaatatcactactc 2362551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 321 - 394
Target Start/End: Complemental strand, 22389483 - 22389411
Alignment:
Q  321 ccaataaaaagagagagaaaagaagttgttaaaaaagttgtctcaaatggatgttcaaatatcactactctttt 394  Q
    ||||| |||||||||| |||||||||||| | ||||||||  |||||||| ||||||||||||| |||||||||    
T  22389483 ccaatgaaaagagagaaaaaagaagttgtcacaaaagttga-tcaaatggttgttcaaatatcattactctttt 22389411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 321 - 390
Target Start/End: Complemental strand, 36690530 - 36690461
Alignment:
Q  321 ccaataaaaagagagagaaaagaagttgttaaaaaagttgtctcaaatggatgttcaaatatcactactc 390  Q
    ||||| |||| |||||||||| ||||||| | ||||||||||||| |||| |||||||||| ||||||||    
T  36690530 ccaatgaaaatagagagaaaataagttgtcacaaaagttgtctcatatggttgttcaaataacactactc 36690461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 321 - 390
Target Start/End: Complemental strand, 36706631 - 36706562
Alignment:
Q  321 ccaataaaaagagagagaaaagaagttgttaaaaaagttgtctcaaatggatgttcaaatatcactactc 390  Q
    ||||| |||| |||||||||| ||||||| | ||||||||||||| |||| |||||||||| ||||||||    
T  36706631 ccaatgaaaatagagagaaaataagttgtcacaaaagttgtctcatatggttgttcaaataacactactc 36706562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 353 - 392
Target Start/End: Original strand, 28716288 - 28716327
Alignment:
Q  353 aaaagttgtctcaaatggatgttcaaatatcactactctt 392  Q
    |||||||||||||||||| |||||||||||||||||||||    
T  28716288 aaaagttgtctcaaatggttgttcaaatatcactactctt 28716327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 321 - 380
Target Start/End: Original strand, 36418192 - 36418251
Alignment:
Q  321 ccaataaaaagagagagaaaagaagttgttaaaaaagttgtctcaaatggatgttcaaat 380  Q
    ||||| ||||||||||||||||||||||| | ||||||||| |||||| | |||||||||    
T  36418192 ccaatgaaaagagagagaaaagaagttgtcacaaaagttgtatcaaatagttgttcaaat 36418251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 338 - 393
Target Start/End: Complemental strand, 43755627 - 43755572
Alignment:
Q  338 aaaagaagttgttaaaaaagttgtctcaaatggatgttcaaatatcactactcttt 393  Q
    |||| ||||||| | || ||||||||||||||||||||||||||||| ||||||||    
T  43755627 aaaaaaagttgtcacaagagttgtctcaaatggatgttcaaatatcattactcttt 43755572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 321 - 395
Target Start/End: Complemental strand, 48872909 - 48872835
Alignment:
Q  321 ccaataaaaagagagagaaaagaagttgttaa-aaaagttgtctcaaatggatgttcaaatatcactactctttta 395  Q
    ||||| ||||||||||||||| ||||||| |  ||||||||| | |||||| ||||||||||||||||||||||||    
T  48872909 ccaatgaaaagagagagaaaa-aagttgtcaccaaaagttgtatgaaatggttgttcaaatatcactactctttta 48872835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 332 - 393
Target Start/End: Original strand, 49453602 - 49453662
Alignment:
Q  332 agagagaaaagaagttgttaaaaaagttgtctcaaatggatgttcaaatatcactactcttt 393  Q
    |||||||||| ||||||| | ||||||||| |||||| | ||||||||||||||||||||||    
T  49453602 agagagaaaa-aagttgtcacaaaagttgtatcaaatagttgttcaaatatcactactcttt 49453662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 213 - 249
Target Start/End: Original strand, 586893 - 586929
Alignment:
Q  213 tagatagagaaatgatatttgtacaatcactttgtga 249  Q
    |||| ||||||||||||||||||||||||||||||||    
T  586893 tagagagagaaatgatatttgtacaatcactttgtga 586929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 321 - 392
Target Start/End: Original strand, 15061958 - 15062030
Alignment:
Q  321 ccaataaaaagagagagaaaagaagttgttaa-aaaagttgtctcaaatggatgttcaaatatcactactctt 392  Q
    |||||||||||||||| |||| ||||||| |  ||||||| | | |||||| |||||||||||||||||||||    
T  15061958 ccaataaaaagagagaaaaaaaaagttgtcaccaaaagttatatgaaatggttgttcaaatatcactactctt 15062030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 216 - 252
Target Start/End: Complemental strand, 31428031 - 31427995
Alignment:
Q  216 atagagaaatgatatttgtacaatcactttgtgacaa 252  Q
    ||||||||||||||||||||||| |||||||||||||    
T  31428031 atagagaaatgatatttgtacaaccactttgtgacaa 31427995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 321 - 389
Target Start/End: Complemental strand, 35846277 - 35846209
Alignment:
Q  321 ccaataaaaagagagagaaaagaagttgttaaaaaagttgtctcaaatggatgttcaaatatcactact 389  Q
    ||||| ||||| |||| ||||||||||||   ||||||||||| |||||| ||||||||||| ||||||    
T  35846277 ccaatgaaaagtgagaaaaaagaagttgtaccaaaagttgtctaaaatggttgttcaaatatgactact 35846209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 321 - 368
Target Start/End: Complemental strand, 5477121 - 5477074
Alignment:
Q  321 ccaataaaaagagagagaaaagaagttgttaaaaaagttgtctcaaat 368  Q
    |||||||||||||||| |||||||||||| | ||||||||| ||||||    
T  5477121 ccaataaaaagagagaaaaaagaagttgtcacaaaagttgtatcaaat 5477074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 321 - 384
Target Start/End: Original strand, 11460907 - 11460970
Alignment:
Q  321 ccaataaaaagagagagaaaagaagttgttaaaaaagttgtctcaaatggatgttcaaatatca 384  Q
    |||||||||||| |||||||  | ||||| ||||||||||| |||||| | |||||||||||||    
T  11460907 ccaataaaaagaaagagaaagaaggttgtcaaaaaagttgtatcaaattgttgttcaaatatca 11460970  T

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Target: chr1; HSP #26
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 322 - 393
Target Start/End: Complemental strand, 20288296 - 20288225
Alignment:
Q  322 caataaaaagagagagaaaagaagttgttaaaaaagttgtctcaaatggatgttcaaatatcactactcttt 393  Q
    |||||||||| |||| ||||||||||||   ||||||||||| |||||| |||||| ||||| ||| |||||    
T  20288296 caataaaaagtgagaaaaaagaagttgtatcaaaagttgtctaaaatggttgttcatatatctctaatcttt 20288225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 321 - 392
Target Start/End: Original strand, 34187377 - 34187448
Alignment:
Q  321 ccaataaaaagagagagaaaagaagttgttaaaaaagttgtctcaaatggatgttcaaatatcactactctt 392  Q
    ||||| |||||||||| || ||||||||| | | || |||||||| |||| ||||||||||||||| |||||    
T  34187377 ccaatgaaaagagagaaaagagaagttgtcacataaattgtctcacatggttgttcaaatatcactcctctt 34187448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 321 - 368
Target Start/End: Original strand, 37690528 - 37690575
Alignment:
Q  321 ccaataaaaagagagagaaaagaagttgttaaaaaagttgtctcaaat 368  Q
    ||||| ||||||||||||||||||||||| | ||||||||| ||||||    
T  37690528 ccaatgaaaagagagagaaaagaagttgtcacaaaagttgtatcaaat 37690575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 327 - 387
Target Start/End: Original strand, 46907103 - 46907155
Alignment:
Q  327 aaaagagagagaaaagaagttgttaaaaaagttgtctcaaatggatgttcaaatatcacta 387  Q
    ||||||||||||||||||||||||        |||||||||||||||||||||||||||||    
T  46907103 aaaagagagagaaaagaagttgtt--------tgtctcaaatggatgttcaaatatcacta 46907155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 217 - 252
Target Start/End: Original strand, 49425736 - 49425771
Alignment:
Q  217 tagagaaatgatatttgtacaatcactttgtgacaa 252  Q
    |||||||||||||||||||||| |||||||||||||    
T  49425736 tagagaaatgatatttgtacaaccactttgtgacaa 49425771  T

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Target: chr1; HSP #31
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 332 - 391
Target Start/End: Original strand, 51571550 - 51571609
Alignment:
Q  332 agagagaaaagaagttgttaaaaaagttgtctcaaatggatgttcaaatatcactactct 391  Q
    ||||| |||||||||||| | ||||||||| | |||||| |||||||||||||| |||||    
T  51571550 agagaaaaaagaagttgtcacaaaagttgtattaaatggttgttcaaatatcacaactct 51571609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 218 - 252
Target Start/End: Complemental strand, 25302715 - 25302681
Alignment:
Q  218 agagaaatgatatttgtacaatcactttgtgacaa 252  Q
    ||||||||||||||||||||| |||||||||||||    
T  25302715 agagaaatgatatttgtacaaccactttgtgacaa 25302681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 321 - 390
Target Start/End: Complemental strand, 28703083 - 28703013
Alignment:
Q  321 ccaataaaaagagagagaaaagaagttgtta-aaaaagttgtctcaaatggatgttcaaatatcactactc 390  Q
    ||||| ||||||||||||||| ||||||| | ||||| || |||||||||| |||| || |||||||||||    
T  28703083 ccaatgaaaagagagagaaaataagttgtcacaaaaaattatctcaaatggttgttaaattatcactactc 28703013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 218 - 252
Target Start/End: Original strand, 49453490 - 49453524
Alignment:
Q  218 agagaaatgatatttgtacaatcactttgtgacaa 252  Q
    ||||||||||||||||||||| |||||||||||||    
T  49453490 agagaaatgatatttgtacaaccactttgtgacaa 49453524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 321 - 387
Target Start/End: Complemental strand, 50141893 - 50141827
Alignment:
Q  321 ccaataaaaagagagagaaaagaagttgttaaaaaagttgtctcaaatggatgttcaaatatcacta 387  Q
    ||||| ||||||||||||||| || |||| | ||||||||||||| || | |||||||||| |||||    
T  50141893 ccaatgaaaagagagagaaaataaattgtcacaaaagttgtctcatatagttgttcaaataacacta 50141827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 218 - 252
Target Start/End: Complemental strand, 50226951 - 50226917
Alignment:
Q  218 agagaaatgatatttgtacaatcactttgtgacaa 252  Q
    ||||||||||||||||||||| |||||||||||||    
T  50226951 agagaaatgatatttgtacaaccactttgtgacaa 50226917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 218 - 252
Target Start/End: Original strand, 50797790 - 50797824
Alignment:
Q  218 agagaaatgatatttgtacaatcactttgtgacaa 252  Q
    |||||||||||||||||||||||| ||||||||||    
T  50797790 agagaaatgatatttgtacaatcattttgtgacaa 50797824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 219 - 252
Target Start/End: Complemental strand, 5309111 - 5309078
Alignment:
Q  219 gagaaatgatatttgtacaatcactttgtgacaa 252  Q
    |||||||||||||||||||| |||||||||||||    
T  5309111 gagaaatgatatttgtacaaccactttgtgacaa 5309078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 219 - 252
Target Start/End: Complemental strand, 16836175 - 16836142
Alignment:
Q  219 gagaaatgatatttgtacaatcactttgtgacaa 252  Q
    ||||||||||||||||||||||| ||||||||||    
T  16836175 gagaaatgatatttgtacaatcattttgtgacaa 16836142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 358 - 387
Target Start/End: Complemental strand, 24981707 - 24981678
Alignment:
Q  358 ttgtctcaaatggatgttcaaatatcacta 387  Q
    ||||||||||||||||||||||||||||||    
T  24981707 ttgtctcaaatggatgttcaaatatcacta 24981678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 219 - 252
Target Start/End: Original strand, 25995460 - 25995493
Alignment:
Q  219 gagaaatgatatttgtacaatcactttgtgacaa 252  Q
    ||||||||||||||||||||||| ||||||||||    
T  25995460 gagaaatgatatttgtacaatcaatttgtgacaa 25995493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 321 - 390
Target Start/End: Complemental strand, 31290166 - 31290097
Alignment:
Q  321 ccaataaaaagagagagaaaagaagttgttaaaaaagttgtctcaaatggatgttcaaatatcactactc 390  Q
    ||||| |||| ||||| |||| ||||||| | ||||||||| | |||||| |||||||||||||| ||||    
T  31290166 ccaatgaaaaaagagaaaaaataagttgtcacaaaagttgtgtgaaatggttgttcaaatatcaccactc 31290097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 219 - 252
Target Start/End: Original strand, 32821635 - 32821668
Alignment:
Q  219 gagaaatgatatttgtacaatcactttgtgacaa 252  Q
    |||||||||||||||||||| |||||||||||||    
T  32821635 gagaaatgatatttgtacaaccactttgtgacaa 32821668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 219 - 252
Target Start/End: Original strand, 37690429 - 37690462
Alignment:
Q  219 gagaaatgatatttgtacaatcactttgtgacaa 252  Q
    ||||||||||||||||||||||||||| ||||||    
T  37690429 gagaaatgatatttgtacaatcactttatgacaa 37690462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 219 - 252
Target Start/End: Complemental strand, 45740615 - 45740582
Alignment:
Q  219 gagaaatgatatttgtacaatcactttgtgacaa 252  Q
    |||||||||||||||||||| |||||||||||||    
T  45740615 gagaaatgatatttgtacaaccactttgtgacaa 45740582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 219 - 252
Target Start/End: Complemental strand, 50528128 - 50528095
Alignment:
Q  219 gagaaatgatatttgtacaatcactttgtgacaa 252  Q
    ||||||||||||||||||||||| ||||||||||    
T  50528128 gagaaatgatatttgtacaatcaatttgtgacaa 50528095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0501 (Bit Score: 39; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0501
Description:

Target: scaffold0501; HSP #1
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 321 - 395
Target Start/End: Complemental strand, 10474 - 10400
Alignment:
Q  321 ccaataaaaagagagagaaaagaagttgttaaaaaagttgtctcaaatggatgttcaaatatcactactctttta 395  Q
    ||||| ||||||||||||||| ||||||| | ||||||||||||| |||| |||||||||| |||| ||| ||||    
T  10474 ccaatgaaaagagagagaaaataagttgtcacaaaagttgtctcatatggttgttcaaataacactgctcattta 10400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057 (Bit Score: 38; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 321 - 390
Target Start/End: Original strand, 38992 - 39061
Alignment:
Q  321 ccaataaaaagagagagaaaagaagttgttaaaaaagttgtctcaaatggatgttcaaatatcactactc 390  Q
    ||||| |||||||||| ||||||  |||| | ||||||||| |||||| |||||||||||||||||||||    
T  38992 ccaatgaaaagagagaaaaaagagattgtcacaaaagttgtttcaaatagatgttcaaatatcactactc 39061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 36; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 321 - 392
Target Start/End: Original strand, 18117 - 18187
Alignment:
Q  321 ccaataaaaagagagagaaaagaagttgttaaaaaagttgtctcaaatggatgttcaaatatcactactctt 392  Q
    ||||| |||||||||| |||| ||||||| | ||||||||| |||||| | |||||||||||||||||||||    
T  18117 ccaatgaaaagagagaaaaaa-aagttgtcataaaagttgtatcaaatagttgttcaaatatcactactctt 18187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 34; Significance: 0.000000002; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 322 - 383
Target Start/End: Original strand, 6541 - 6602
Alignment:
Q  322 caataaaaagagagagaaaagaagttgttaaaaaagttgtctcaaatggatgttcaaatatc 383  Q
    |||| |||||||||| |||||||||| | |  | ||||||||||||||||||||||||||||    
T  6541 caatgaaaagagagaaaaaagaagttatcacgagagttgtctcaaatggatgttcaaatatc 6602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 33; Significance: 0.000000006; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 352 - 392
Target Start/End: Original strand, 36146 - 36186
Alignment:
Q  352 aaaaagttgtctcaaatggatgttcaaatatcactactctt 392  Q
    |||||||||| |||||||| |||||||||||||||||||||    
T  36146 aaaaagttgtatcaaatggttgttcaaatatcactactctt 36186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0115 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold0115
Description:

Target: scaffold0115; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 321 - 392
Target Start/End: Complemental strand, 15146 - 15076
Alignment:
Q  321 ccaataaaaagagagagaaaagaagttgttaaaaaagttgtctcaaatggatgttcaaatatcactactctt 392  Q
    ||||| |||| ||||| |||||||||||| | |||||||||  ||||| | |||||||||||||||||||||    
T  15146 ccaatgaaaaaagaga-aaaagaagttgtcacaaaagttgtaccaaatagttgttcaaatatcactactctt 15076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 31; Significance: 0.0000001; HSPs: 2)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 321 - 391
Target Start/End: Original strand, 113738 - 113808
Alignment:
Q  321 ccaataaaaagagagagaaaagaagttgttaaaaaagttgtctcaaatggatgttcaaatatcactactct 391  Q
    ||||| |||||||||| || ||| ||||| | |||| |||| |||||| |||||| |||||||||||||||    
T  113738 ccaatgaaaagagagaaaagagaggttgtcacaaaaattgtttcaaatagatgtttaaatatcactactct 113808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #2
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 219 - 252
Target Start/End: Original strand, 113625 - 113658
Alignment:
Q  219 gagaaatgatatttgtacaatcactttgtgacaa 252  Q
    |||||||||||||||||||| |||||||||||||    
T  113625 gagaaatgatatttgtacaaccactttgtgacaa 113658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 31; Significance: 0.0000001; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 218 - 252
Target Start/End: Complemental strand, 219736 - 219702
Alignment:
Q  218 agagaaatgatatttgtacaatcactttgtgacaa 252  Q
    ||||||||||||||||||||| |||||||||||||    
T  219736 agagaaatgatatttgtacaaccactttgtgacaa 219702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0508 (Bit Score: 30; Significance: 0.0000004; HSPs: 1)
Name: scaffold0508
Description:

Target: scaffold0508; HSP #1
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 353 - 394
Target Start/End: Complemental strand, 11462 - 11421
Alignment:
Q  353 aaaagttgtctcaaatggatgttcaaatatcactactctttt 394  Q
    ||||||||||| |||| | |||||||||||||||||||||||    
T  11462 aaaagttgtctaaaatagttgttcaaatatcactactctttt 11421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0286 (Bit Score: 30; Significance: 0.0000004; HSPs: 1)
Name: scaffold0286
Description:

Target: scaffold0286; HSP #1
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 219 - 252
Target Start/End: Complemental strand, 18707 - 18674
Alignment:
Q  219 gagaaatgatatttgtacaatcactttgtgacaa 252  Q
    ||||||||||||||||||||||| ||||||||||    
T  18707 gagaaatgatatttgtacaatcaatttgtgacaa 18674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0204 (Bit Score: 30; Significance: 0.0000004; HSPs: 1)
Name: scaffold0204
Description:

Target: scaffold0204; HSP #1
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 321 - 393
Target Start/End: Original strand, 27452 - 27525
Alignment:
Q  321 ccaataaaaagagagagaaaagaagttgttaa-aaaagttgtctcaaatggatgttcaaatatcactactcttt 393  Q
    |||||| ||||||||| ||||||| |||| |  |||| |||| | |||||| ||||||||||||||||||||||    
T  27452 ccaatagaaagagagaaaaaagaaattgtcactaaaaattgtatgaaatggttgttcaaatatcactactcttt 27525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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