View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5907-Insertion-15 (Length: 370)
Name: NF5907-Insertion-15
Description: NF5907
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5907-Insertion-15 |
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Alignment Details
Target: chr2 (Bit Score: 337; Significance: 0; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 337; E-Value: 0
Query Start/End: Original strand, 9 - 365
Target Start/End: Original strand, 36521267 - 36521623
Alignment:
| Q |
9 |
tgtcgtttagttttctttctgaccattggattttttaaacatcaaaatccagtgatgacttcctcaatgttgagcttgtttgcatgggccctacctcgtg |
108 |
Q |
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| T |
36521267 |
tgtcgtttagttttctttctgaccattggatttgttaaacatcaaaatccagtgatgacttcctcaatgttgagcttgcttgcatgggccctacctcgtg |
36521366 |
T |
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| Q |
109 |
cccttctggataaatgattaatttgaattttggatgtagtacactacaatgtttttaaggtaaactctttagtaatgaaaagaattttatcagcttataa |
208 |
Q |
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| T |
36521367 |
cccttctggataaatgattaattggaattttggatgtagtacactacaatgtttttaaggtaaactctttagtaatgaaaagaattttatcagcttataa |
36521466 |
T |
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| Q |
209 |
gggtaaatattggacgtcattgtattcatattgtggtcactaataaattctttttcatcatcaaatagtataccaaatgtatgacatggtaaaagaatga |
308 |
Q |
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| T |
36521467 |
gggtaaatattggtcgtcattgtattcatattgtggtcactaataaattctttttcatcatcaaatagtataccaaatgtatgacatggtaaaagaatga |
36521566 |
T |
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| Q |
309 |
aatcataatttttatcaagtacgaatcaaacacataatagaatttatatcataatat |
365 |
Q |
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| T |
36521567 |
aatcataatttttatcaagtacgaatcaaacacataatataatttatatcataatat |
36521623 |
T |
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