View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF5907_high_44 (Length: 302)

Name: NF5907_high_44
Description: NF5907
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF5907_high_44
NF5907_high_44
[»] chr7 (22 HSPs)
chr7 (26-134)||(38826614-38826722)
chr7 (259-300)||(5835730-5835771)
chr7 (254-302)||(35097778-35097826)
chr7 (259-302)||(15108338-15108383)
chr7 (261-299)||(25622137-25622175)
chr7 (257-302)||(44412546-44412592)
chr7 (258-302)||(18655374-18655419)
chr7 (259-299)||(21852987-21853028)
chr7 (258-302)||(28000132-28000177)
chr7 (258-302)||(31417516-31417561)
chr7 (259-302)||(43596526-43596570)
chr7 (259-302)||(45639738-45639782)
chr7 (259-302)||(18656292-18656335)
chr7 (260-299)||(2248649-2248690)
chr7 (259-302)||(19336296-19336341)
chr7 (259-302)||(24374515-24374560)
chr7 (19-93)||(38814145-38814219)
chr7 (273-302)||(25622374-25622403)
chr7 (251-302)||(1263776-1263828)
chr7 (258-299)||(28157021-28157064)
chr7 (259-302)||(47973872-47973916)
chr7 (251-302)||(48848154-48848206)
[»] chr8 (29 HSPs)
chr8 (256-300)||(43888949-43888993)
chr8 (260-302)||(23566140-23566182)
chr8 (258-302)||(23564250-23564294)
chr8 (256-300)||(39302132-39302176)
chr8 (258-299)||(4923509-4923551)
chr8 (254-299)||(21692622-21692668)
chr8 (258-302)||(23565892-23565937)
chr8 (259-302)||(22686742-22686786)
chr8 (259-302)||(23564101-23564145)
chr8 (256-299)||(41708824-41708868)
chr8 (261-300)||(3521045-3521084)
chr8 (260-302)||(3785525-3785568)
chr8 (258-302)||(37611495-37611541)
chr8 (258-300)||(43383006-43383049)
chr8 (260-295)||(43889051-43889086)
chr8 (259-302)||(5160513-5160558)
chr8 (259-302)||(11105963-11106008)
chr8 (256-299)||(11424353-11424398)
chr8 (259-300)||(45530501-45530543)
chr8 (257-299)||(13759539-13759583)
chr8 (258-302)||(4105294-4105338)
chr8 (254-298)||(5422736-5422780)
chr8 (259-300)||(11424111-11424154)
chr8 (259-302)||(11961117-11961161)
chr8 (263-302)||(15152303-15152343)
chr8 (260-299)||(19158184-19158224)
chr8 (259-302)||(29346339-29346383)
chr8 (259-302)||(38132075-38132119)
chr8 (259-302)||(38687525-38687569)
[»] chr1 (31 HSPs)
chr1 (253-302)||(15710809-15710858)
chr1 (259-302)||(16555543-16555587)
chr1 (258-302)||(24004764-24004809)
chr1 (259-300)||(25170955-25170996)
chr1 (258-302)||(26399531-26399576)
chr1 (254-299)||(12277470-12277517)
chr1 (255-302)||(17724280-17724328)
chr1 (259-300)||(36454499-36454542)
chr1 (263-302)||(18653822-18653861)
chr1 (258-300)||(26486785-26486828)
chr1 (260-302)||(37847785-37847828)
chr1 (258-302)||(43413074-43413120)
chr1 (260-302)||(46583826-46583869)
chr1 (256-299)||(15961758-15961803)
chr1 (259-300)||(16555324-16555366)
chr1 (259-302)||(46208198-46208243)
chr1 (258-299)||(52413119-52413161)
chr1 (259-300)||(1632318-1632359)
chr1 (258-299)||(3149735-3149776)
chr1 (260-300)||(7454889-7454930)
chr1 (258-300)||(35384223-35384267)
chr1 (257-299)||(50721943-50721987)
chr1 (259-302)||(10176436-10176480)
chr1 (260-299)||(12277188-12277228)
chr1 (258-298)||(20158985-20159025)
chr1 (260-300)||(27142720-27142760)
chr1 (260-299)||(35384473-35384513)
chr1 (259-302)||(37847601-37847645)
chr1 (260-299)||(39160549-39160589)
chr1 (259-300)||(48954952-48954995)
chr1 (259-299)||(50956963-50957002)
[»] chr6 (25 HSPs)
chr6 (254-298)||(21226720-21226764)
chr6 (258-299)||(19376064-19376105)
chr6 (258-302)||(2181561-2181605)
chr6 (260-300)||(10790350-10790390)
chr6 (241-300)||(25562136-25562195)
chr6 (241-300)||(26101650-26101709)
chr6 (258-302)||(1310085-1310131)
chr6 (257-302)||(7017067-7017113)
chr6 (251-302)||(21604368-21604421)
chr6 (254-302)||(19376204-19376253)
chr6 (259-302)||(24602429-24602473)
chr6 (256-291)||(229547-229582)
chr6 (260-302)||(7017312-7017355)
chr6 (260-302)||(7313451-7313494)
chr6 (241-299)||(25567684-25567742)
chr6 (260-302)||(33352629-33352672)
chr6 (257-302)||(1309783-1309829)
chr6 (258-296)||(7998504-7998542)
chr6 (259-302)||(10366400-10366445)
chr6 (260-302)||(15881345-15881387)
chr6 (261-302)||(19417947-19417989)
chr6 (258-299)||(29239718-29239760)
chr6 (258-299)||(31656365-31656406)
chr6 (251-299)||(31826206-31826255)
chr6 (256-299)||(31733302-31733348)
[»] chr3 (49 HSPs)
chr3 (254-302)||(1421425-1421473)
chr3 (256-302)||(2680038-2680084)
chr3 (258-299)||(51102328-51102369)
chr3 (256-300)||(30908581-30908625)
chr3 (259-302)||(31341455-31341499)
chr3 (254-299)||(35434089-35434135)
chr3 (262-300)||(46550807-46550845)
chr3 (258-302)||(31341224-31341269)
chr3 (258-302)||(53523390-53523435)
chr3 (258-302)||(55090257-55090302)
chr3 (259-302)||(21549995-21550039)
chr3 (257-302)||(24286149-24286196)
chr3 (259-299)||(35359659-35359699)
chr3 (254-299)||(39846369-39846416)
chr3 (260-299)||(13468361-13468400)
chr3 (254-300)||(19301173-19301220)
chr3 (260-302)||(33898073-33898116)
chr3 (260-302)||(40066706-40066749)
chr3 (254-302)||(41747456-41747506)
chr3 (257-299)||(54012605-54012648)
chr3 (259-302)||(3820724-3820769)
chr3 (259-302)||(15096523-15096568)
chr3 (258-299)||(17261023-17261065)
chr3 (259-297)||(19598734-19598772)
chr3 (259-302)||(25924040-25924085)
chr3 (259-300)||(35359471-35359513)
chr3 (259-302)||(41747305-41747350)
chr3 (259-302)||(45333847-45333892)
chr3 (259-300)||(48418653-48418695)
chr3 (257-302)||(52491570-52491616)
chr3 (259-299)||(1351484-1351525)
chr3 (259-299)||(11761081-11761122)
chr3 (258-302)||(19757113-19757160)
chr3 (261-299)||(23526731-23526771)
chr3 (251-299)||(30271535-30271584)
chr3 (259-299)||(39846597-39846638)
chr3 (260-302)||(44512499-44512543)
chr3 (258-302)||(53667678-53667723)
chr3 (261-302)||(53667791-53667832)
chr3 (258-302)||(54012356-54012401)
chr3 (259-302)||(3820493-3820537)
chr3 (259-300)||(3841319-3841362)
chr3 (259-299)||(13468247-13468287)
chr3 (258-302)||(23388723-23388766)
chr3 (260-300)||(23388913-23388953)
chr3 (261-302)||(33887072-33887115)
chr3 (257-300)||(41301294-41301338)
chr3 (261-300)||(46993874-46993914)
chr3 (259-302)||(54087744-54087788)
[»] chr4 (39 HSPs)
chr4 (259-302)||(12144794-12144837)
chr4 (257-299)||(23981368-23981410)
chr4 (260-302)||(48613061-48613103)
chr4 (258-302)||(9884953-9884997)
chr4 (256-302)||(26144154-26144201)
chr4 (256-302)||(46360907-46360954)
chr4 (259-300)||(35904868-35904910)
chr4 (261-302)||(54097284-54097325)
chr4 (259-302)||(3475485-3475529)
chr4 (259-302)||(12878674-12878718)
chr4 (259-302)||(13033140-13033184)
chr4 (259-302)||(15782261-15782305)
chr4 (256-302)||(7086080-7086127)
chr4 (256-302)||(23981118-23981165)
chr4 (257-299)||(36405870-36405913)
chr4 (258-300)||(50084820-50084865)
chr4 (258-300)||(54097098-54097141)
chr4 (258-299)||(1952733-1952775)
chr4 (255-302)||(5419981-5420030)
chr4 (263-297)||(7309504-7309538)
chr4 (261-302)||(8974270-8974312)
chr4 (261-302)||(20514901-20514943)
chr4 (259-302)||(24670739-24670784)
chr4 (258-299)||(35370405-35370447)
chr4 (258-300)||(52439582-52439624)
chr4 (250-298)||(6439175-6439224)
chr4 (262-302)||(30961821-30961862)
chr4 (258-302)||(30966610-30966655)
chr4 (262-302)||(31592759-31592800)
chr4 (259-299)||(36405658-36405699)
chr4 (258-302)||(52439337-52439382)
chr4 (259-302)||(3475708-3475752)
chr4 (259-302)||(7085841-7085885)
chr4 (257-297)||(17696401-17696441)
chr4 (258-302)||(24560509-24560553)
chr4 (259-302)||(28292052-28292096)
chr4 (249-302)||(31110241-31110296)
chr4 (259-298)||(35804084-35804124)
chr4 (258-297)||(47858448-47858488)
[»] scaffold0334 (2 HSPs)
scaffold0334 (260-302)||(4315-4357)
scaffold0334 (254-299)||(4066-4111)
[»] scaffold0002 (1 HSPs)
scaffold0002 (256-302)||(342651-342697)
[»] chr2 (41 HSPs)
chr2 (251-302)||(8898446-8898498)
chr2 (259-299)||(43015218-43015258)
chr2 (260-302)||(8467207-8467250)
chr2 (249-299)||(14793472-14793523)
chr2 (253-302)||(7327761-7327811)
chr2 (257-299)||(18048814-18048856)
chr2 (251-299)||(16361151-16361200)
chr2 (261-302)||(24413611-24413652)
chr2 (258-302)||(28739406-28739451)
chr2 (258-302)||(32845455-32845500)
chr2 (255-302)||(16139130-16139178)
chr2 (259-302)||(32845676-32845720)
chr2 (259-302)||(36944244-36944288)
chr2 (258-302)||(493725-493771)
chr2 (260-302)||(5558466-5558509)
chr2 (259-302)||(5856114-5856157)
chr2 (258-302)||(13691742-13691788)
chr2 (258-300)||(32649852-32649895)
chr2 (257-302)||(18544020-18544066)
chr2 (257-302)||(22552502-22552548)
chr2 (257-299)||(30728940-30728981)
chr2 (259-300)||(35916382-35916424)
chr2 (256-302)||(2941360-2941408)
chr2 (259-299)||(8214576-8214617)
chr2 (259-299)||(8898298-8898339)
chr2 (259-299)||(24951903-24951944)
chr2 (259-299)||(24952072-24952113)
chr2 (261-302)||(33441781-33441822)
chr2 (261-302)||(38470731-38470772)
chr2 (262-302)||(40385245-40385286)
chr2 (259-299)||(43766498-43766539)
chr2 (260-302)||(44612503-44612547)
chr2 (258-302)||(45632541-45632586)
chr2 (258-302)||(45632739-45632784)
chr2 (259-302)||(13691989-13692033)
chr2 (260-299)||(17920245-17920285)
chr2 (260-299)||(23045167-23045207)
chr2 (259-302)||(25299330-25299374)
chr2 (260-299)||(29640763-29640803)
chr2 (258-298)||(36795154-36795194)
chr2 (259-302)||(41611574-41611618)
[»] scaffold1797 (1 HSPs)
scaffold1797 (254-302)||(466-516)
[»] chr5 (20 HSPs)
chr5 (260-299)||(28519644-28519683)
chr5 (259-302)||(31261229-31261271)
chr5 (260-298)||(13012643-13012681)
chr5 (256-302)||(24802025-24802071)
chr5 (251-302)||(18254382-18254434)
chr5 (259-302)||(28593538-28593582)
chr5 (260-302)||(4633954-4633997)
chr5 (260-302)||(9672897-9672940)
chr5 (260-302)||(10598319-10598362)
chr5 (260-302)||(13012435-13012478)
chr5 (260-302)||(13083845-13083888)
chr5 (259-302)||(34889715-34889757)
chr5 (260-302)||(36518873-36518916)
chr5 (260-297)||(13924365-13924403)
chr5 (260-302)||(24801778-24801820)
chr5 (254-302)||(5661888-5661937)
chr5 (256-302)||(12496530-12496578)
chr5 (256-297)||(1460683-1460726)
chr5 (261-300)||(4633761-4633801)
chr5 (263-299)||(39089649-39089685)
[»] scaffold0511 (1 HSPs)
scaffold0511 (257-299)||(5443-5486)
[»] scaffold0192 (1 HSPs)
scaffold0192 (257-299)||(14464-14507)
[»] scaffold0085 (1 HSPs)
scaffold0085 (256-300)||(25024-25070)
[»] scaffold0010 (1 HSPs)
scaffold0010 (258-302)||(145562-145608)
[»] scaffold0009 (1 HSPs)
scaffold0009 (251-299)||(149977-150027)
[»] scaffold0111 (1 HSPs)
scaffold0111 (257-302)||(29697-29743)
[»] scaffold0053 (1 HSPs)
scaffold0053 (259-300)||(29893-29935)
[»] scaffold0597 (1 HSPs)
scaffold0597 (258-302)||(6492-6537)
[»] scaffold0148 (1 HSPs)
scaffold0148 (256-302)||(34995-35043)
[»] scaffold0318 (1 HSPs)
scaffold0318 (259-302)||(12397-12441)
[»] scaffold0013 (1 HSPs)
scaffold0013 (259-302)||(149484-149528)


Alignment Details
Target: chr7 (Bit Score: 101; Significance: 4e-50; HSPs: 22)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 26 - 134
Target Start/End: Original strand, 38826614 - 38826722
Alignment:
Q  26 tgcccataattcttcaggaagatatgagtttgaacaatcctcgttcttattcatattcatcacattcacaacacacacttatttttcccttcaagtcacg 125  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  38826614 tgcccataattcttcagaaagatatgagtttgaacaatcctcgttcttattcatattcatcacattcacaacacgcacttatttttcccttcaagtcacg 38826713  T
Q  126 ttcttcaat 134  Q
    |||||||||    
T  38826714 ttcttcaat 38826722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 259 - 300
Target Start/End: Original strand, 5835730 - 5835771
Alignment:
Q  259 agggttaatggtgctttactcctgtaatataggtcatttttt 300  Q
    ||||||||||||| ||||||||||||||||||||||||||||    
T  5835730 agggttaatggtgttttactcctgtaatataggtcatttttt 5835771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 254 - 302
Target Start/End: Complemental strand, 35097826 - 35097778
Alignment:
Q  254 aattaagggttaatggtgctttactcctgtaatataggtcattttttgt 302  Q
    |||| ||||||||||||| ||||| ||||||||||||||||||||||||    
T  35097826 aatttagggttaatggtgttttacccctgtaatataggtcattttttgt 35097778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 259 - 302
Target Start/End: Complemental strand, 15108383 - 15108338
Alignment:
Q  259 agggttaatggtgctttac--tcctgtaatataggtcattttttgt 302  Q
    |||||||||||||||||||  |||||||||||||||||||||||||    
T  15108383 agggttaatggtgctttaccctcctgtaatataggtcattttttgt 15108338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 261 - 299
Target Start/End: Original strand, 25622137 - 25622175
Alignment:
Q  261 ggttaatggtgctttactcctgtaatataggtcattttt 299  Q
    ||||||||||||||||| |||||||||||||||||||||    
T  25622137 ggttaatggtgctttacccctgtaatataggtcattttt 25622175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 257 - 302
Target Start/End: Complemental strand, 44412592 - 44412546
Alignment:
Q  257 taagggttaatggtgctttactcc-tgtaatataggtcattttttgt 302  Q
    ||||||||||||||||||||| || ||||||||||||||||||||||    
T  44412592 taagggttaatggtgctttaccccctgtaatataggtcattttttgt 44412546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 258 - 302
Target Start/End: Original strand, 18655374 - 18655419
Alignment:
Q  258 aagggttaatggtgctttactcc-tgtaatataggtcattttttgt 302  Q
    |||||||||||||||||||| || ||||||||||||||||||||||    
T  18655374 aagggttaatggtgctttaccccctgtaatataggtcattttttgt 18655419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 259 - 299
Target Start/End: Complemental strand, 21853028 - 21852987
Alignment:
Q  259 agggttaatggtgctttac-tcctgtaatataggtcattttt 299  Q
    ||||||||||||||||||| ||||||||||||||||||||||    
T  21853028 agggttaatggtgctttacctcctgtaatataggtcattttt 21852987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 258 - 302
Target Start/End: Complemental strand, 28000177 - 28000132
Alignment:
Q  258 aagggttaatggtgctttactcc-tgtaatataggtcattttttgt 302  Q
    |||||||||||||||||||| || ||||||||||||||||||||||    
T  28000177 aagggttaatggtgctttaccccctgtaatataggtcattttttgt 28000132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 258 - 302
Target Start/End: Complemental strand, 31417561 - 31417516
Alignment:
Q  258 aagggttaatggtgctttactcc-tgtaatataggtcattttttgt 302  Q
    |||||||||||||||||||| || ||||||||||||||||||||||    
T  31417561 aagggttaatggtgctttaccccctgtaatataggtcattttttgt 31417516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 259 - 302
Target Start/End: Complemental strand, 43596570 - 43596526
Alignment:
Q  259 agggttaatggtgctttactcc-tgtaatataggtcattttttgt 302  Q
    ||||||||||||||||||| || ||||||||||||||||||||||    
T  43596570 agggttaatggtgctttaccccctgtaatataggtcattttttgt 43596526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 259 - 302
Target Start/End: Complemental strand, 45639782 - 45639738
Alignment:
Q  259 agggttaatggtgctttactcc-tgtaatataggtcattttttgt 302  Q
    ||||||||||||||||||| || ||||||||||||||||||||||    
T  45639782 agggttaatggtgctttaccccctgtaatataggtcattttttgt 45639738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 259 - 302
Target Start/End: Complemental strand, 18656335 - 18656292
Alignment:
Q  259 agggttaatggtgctttactcctgtaatataggtcattttttgt 302  Q
    ||||||||||||| ||||  ||||||||||||||||||||||||    
T  18656335 agggttaatggtgatttatccctgtaatataggtcattttttgt 18656292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 260 - 299
Target Start/End: Complemental strand, 2248690 - 2248649
Alignment:
Q  260 gggttaatggtgctttac--tcctgtaatataggtcattttt 299  Q
    ||||||||||||||||||  ||||||||||||||||||||||    
T  2248690 gggttaatggtgctttaccctcctgtaatataggtcattttt 2248649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 259 - 302
Target Start/End: Complemental strand, 19336341 - 19336296
Alignment:
Q  259 agggttaatggtgctttactcc--tgtaatataggtcattttttgt 302  Q
    ||||||||||||||||||| ||  ||||||||||||||||||||||    
T  19336341 agggttaatggtgctttacccccctgtaatataggtcattttttgt 19336296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 259 - 302
Target Start/End: Complemental strand, 24374560 - 24374515
Alignment:
Q  259 agggttaatggtgcttta--ctcctgtaatataggtcattttttgt 302  Q
    ||||||||||||||||||  | ||||||||||||||||||||||||    
T  24374560 agggttaatggtgctttatccccctgtaatataggtcattttttgt 24374515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 19 - 93
Target Start/End: Original strand, 38814145 - 38814219
Alignment:
Q  19 atataattgcccataattcttcaggaagatatgagtttgaacaatcctcgttcttattcatattcatcacattca 93  Q
    |||||||| |||| || |||||| |||||| |||||||||||| ||| |   ||||||||||| |||||||||||    
T  38814145 atataattacccacaaatcttcaagaagatttgagtttgaacactccactaccttattcatatccatcacattca 38814219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 273 - 302
Target Start/End: Complemental strand, 25622403 - 25622374
Alignment:
Q  273 tttactcctgtaatataggtcattttttgt 302  Q
    ||||||||||||||||||||||||||||||    
T  25622403 tttactcctgtaatataggtcattttttgt 25622374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 251 - 302
Target Start/End: Original strand, 1263776 - 1263828
Alignment:
Q  251 tataattaagggttaatggtgctttactcc-tgtaatataggtcattttttgt 302  Q
    |||| ||| |||||||||||||||||| || |||||||||| |||||||||||    
T  1263776 tatatttatgggttaatggtgctttaccccctgtaatatagatcattttttgt 1263828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 258 - 299
Target Start/End: Original strand, 28157021 - 28157064
Alignment:
Q  258 aagggttaatggtgctttactcc--tgtaatataggtcattttt 299  Q
    |||||||||||||||||||| ||  |||||||||||||||||||    
T  28157021 aagggttaatggtgctttacccccctgtaatataggtcattttt 28157064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 259 - 302
Target Start/End: Complemental strand, 47973916 - 47973872
Alignment:
Q  259 agggttaatggtgcttta-ctcctgtaatataggtcattttttgt 302  Q
    |||||||||||||||||| | |||||||||||||| |||||||||    
T  47973916 agggttaatggtgctttatcccctgtaatataggttattttttgt 47973872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 251 - 302
Target Start/End: Complemental strand, 48848206 - 48848154
Alignment:
Q  251 tataattaagggttaatggtgctttactcc-tgtaatataggtcattttttgt 302  Q
    |||| ||| |||||||||||||||||| || | ||||||||||||||||||||    
T  48848206 tatatttatgggttaatggtgctttaccccctataatataggtcattttttgt 48848154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 45; Significance: 1e-16; HSPs: 29)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 256 - 300
Target Start/End: Original strand, 43888949 - 43888993
Alignment:
Q  256 ttaagggttaatggtgctttactcctgtaatataggtcatttttt 300  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  43888949 ttaagggttaatggtgctttactcctgtaatataggtcatttttt 43888993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 260 - 302
Target Start/End: Complemental strand, 23566182 - 23566140
Alignment:
Q  260 gggttaatggtgctttactcctgtaatataggtcattttttgt 302  Q
    |||||||||||||||||| ||||||||||||||||||||||||    
T  23566182 gggttaatggtgctttacccctgtaatataggtcattttttgt 23566140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 258 - 302
Target Start/End: Complemental strand, 23564294 - 23564250
Alignment:
Q  258 aagggttaatggtgctttactcctgtaatataggtcattttttgt 302  Q
    |||| ||||||||||||||| ||||||||||||||||||||||||    
T  23564294 aaggattaatggtgctttacccctgtaatataggtcattttttgt 23564250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 256 - 300
Target Start/End: Complemental strand, 39302176 - 39302132
Alignment:
Q  256 ttaagggttaatggtgctttactcctgtaatataggtcatttttt 300  Q
    |||||||||||||||| ||||| ||||||||||||||||||||||    
T  39302176 ttaagggttaatggtgttttacccctgtaatataggtcatttttt 39302132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 258 - 299
Target Start/End: Complemental strand, 4923551 - 4923509
Alignment:
Q  258 aagggttaatggtgctttactcc-tgtaatataggtcattttt 299  Q
    ||||||||||||||||||||||| |||||||||||||||||||    
T  4923551 aagggttaatggtgctttactccttgtaatataggtcattttt 4923509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 254 - 299
Target Start/End: Complemental strand, 21692668 - 21692622
Alignment:
Q  254 aattaagggttaatggtgcttta-ctcctgtaatataggtcattttt 299  Q
    ||||||||||||||||||||||| | |||||||||||||||||||||    
T  21692668 aattaagggttaatggtgctttaccccctgtaatataggtcattttt 21692622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 258 - 302
Target Start/End: Original strand, 23565892 - 23565937
Alignment:
Q  258 aagggttaatggtgctttactc-ctgtaatataggtcattttttgt 302  Q
    |||||||||||||||||||| | |||||||||||||||||||||||    
T  23565892 aagggttaatggtgctttaccctctgtaatataggtcattttttgt 23565937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 259 - 302
Target Start/End: Original strand, 22686742 - 22686786
Alignment:
Q  259 agggttaatggtgctttactcc-tgtaatataggtcattttttgt 302  Q
    ||||||||||||||||||| || ||||||||||||||||||||||    
T  22686742 agggttaatggtgctttaccccctgtaatataggtcattttttgt 22686786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 259 - 302
Target Start/End: Original strand, 23564101 - 23564145
Alignment:
Q  259 agggttaatggtgctttactcc-tgtaatataggtcattttttgt 302  Q
    ||||||||||||||||||| || ||||||||||||||||||||||    
T  23564101 agggttaatggtgctttaccccctgtaatataggtcattttttgt 23564145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 256 - 299
Target Start/End: Original strand, 41708824 - 41708868
Alignment:
Q  256 ttaagggttaatggtgcttta-ctcctgtaatataggtcattttt 299  Q
    ||||||||||||||||||||| | |||||||||||||||||||||    
T  41708824 ttaagggttaatggtgctttaccccctgtaatataggtcattttt 41708868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 261 - 300
Target Start/End: Complemental strand, 3521084 - 3521045
Alignment:
Q  261 ggttaatggtgctttactcctgtaatataggtcatttttt 300  Q
    |||||||||||||||||||||||||||| | |||||||||    
T  3521084 ggttaatggtgctttactcctgtaatattgatcatttttt 3521045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 260 - 302
Target Start/End: Original strand, 3785525 - 3785568
Alignment:
Q  260 gggttaatggtgctttactcc-tgtaatataggtcattttttgt 302  Q
    |||||||||||||||||| || ||||||||||||||||||||||    
T  3785525 gggttaatggtgctttaccccctgtaatataggtcattttttgt 3785568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 258 - 302
Target Start/End: Complemental strand, 37611541 - 37611495
Alignment:
Q  258 aagggttaatggtgctttactcc--tgtaatataggtcattttttgt 302  Q
    |||||||||||||||||||| ||  ||||||||||||||||||||||    
T  37611541 aagggttaatggtgctttacccccctgtaatataggtcattttttgt 37611495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 258 - 300
Target Start/End: Complemental strand, 43383049 - 43383006
Alignment:
Q  258 aagggttaatggtgctttactcc-tgtaatataggtcatttttt 300  Q
    |||||||||||||||||||| || ||||||||||||||||||||    
T  43383049 aagggttaatggtgctttaccccctgtaatataggtcatttttt 43383006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 260 - 295
Target Start/End: Complemental strand, 43889086 - 43889051
Alignment:
Q  260 gggttaatggtgctttactcctgtaatataggtcat 295  Q
    |||||||||||||||||| |||||||||||||||||    
T  43889086 gggttaatggtgctttacccctgtaatataggtcat 43889051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 259 - 302
Target Start/End: Complemental strand, 5160558 - 5160513
Alignment:
Q  259 agggttaatggtgctttactcc--tgtaatataggtcattttttgt 302  Q
    ||||||||||||||||||| ||  ||||||||||||||||||||||    
T  5160558 agggttaatggtgctttacccccctgtaatataggtcattttttgt 5160513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 259 - 302
Target Start/End: Complemental strand, 11106008 - 11105963
Alignment:
Q  259 agggttaatggtgctttactcc--tgtaatataggtcattttttgt 302  Q
    ||||||||||||||||||| ||  ||||||||||||||||||||||    
T  11106008 agggttaatggtgctttacccccctgtaatataggtcattttttgt 11105963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 256 - 299
Target Start/End: Complemental strand, 11424398 - 11424353
Alignment:
Q  256 ttaagggttaatggtgcttta--ctcctgtaatataggtcattttt 299  Q
    |||||||||||||||||||||  | |||||||||||||||||||||    
T  11424398 ttaagggttaatggtgctttacccccctgtaatataggtcattttt 11424353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 259 - 300
Target Start/End: Original strand, 45530501 - 45530543
Alignment:
Q  259 agggttaatggtgctttactcc-tgtaatataggtcatttttt 300  Q
    ||||||||||||||||||| || ||||||||||||||||||||    
T  45530501 agggttaatggtgctttaccccctgtaatataggtcatttttt 45530543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 257 - 299
Target Start/End: Complemental strand, 13759583 - 13759539
Alignment:
Q  257 taagggttaatggtgcttta--ctcctgtaatataggtcattttt 299  Q
    ||||||||||||||||||||  |||||| ||||||||||||||||    
T  13759583 taagggttaatggtgctttactctcctggaatataggtcattttt 13759539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 258 - 302
Target Start/End: Complemental strand, 4105338 - 4105294
Alignment:
Q  258 aagggttaatggtgctttactcctgtaatataggtcattttttgt 302  Q
    |||||||||| |  |||||| ||||||||||||||||||||||||    
T  4105338 aagggttaataggtctttacccctgtaatataggtcattttttgt 4105294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 254 - 298
Target Start/End: Original strand, 5422736 - 5422780
Alignment:
Q  254 aattaagggttaatggtgctttactcctgtaatataggtcatttt 298  Q
    |||| ||||||||| ||| ||||| ||||||||||||||||||||    
T  5422736 aatttagggttaatagtgatttacccctgtaatataggtcatttt 5422780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 259 - 300
Target Start/End: Original strand, 11424111 - 11424154
Alignment:
Q  259 agggttaatggtgctttactcc--tgtaatataggtcatttttt 300  Q
    ||||||||||||||||||| ||  ||||||||||||||||||||    
T  11424111 agggttaatggtgctttacccccttgtaatataggtcatttttt 11424154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 259 - 302
Target Start/End: Complemental strand, 11961161 - 11961117
Alignment:
Q  259 agggttaatggtgctttactcc-tgtaatataggtcattttttgt 302  Q
    ||||||||||||| ||||| || ||||||||||||||||||||||    
T  11961161 agggttaatggtggtttaccccctgtaatataggtcattttttgt 11961117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 263 - 302
Target Start/End: Complemental strand, 15152343 - 15152303
Alignment:
Q  263 ttaatggtgctttactcc-tgtaatataggtcattttttgt 302  Q
    ||||||||||||||| || ||||||||||||||||||||||    
T  15152343 ttaatggtgctttaccccctgtaatataggtcattttttgt 15152303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 260 - 299
Target Start/End: Complemental strand, 19158224 - 19158184
Alignment:
Q  260 gggttaatggtgctttactcc-tgtaatataggtcattttt 299  Q
    |||||||||||||||||| || |||||||||||||||||||    
T  19158224 gggttaatggtgctttaccccctgtaatataggtcattttt 19158184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 259 - 302
Target Start/End: Complemental strand, 29346383 - 29346339
Alignment:
Q  259 agggttaatggtgctttac-tcctgtaatataggtcattttttgt 302  Q
    ||||||| ||||||||||| ||| |||||||||||||||||||||    
T  29346383 agggttagtggtgctttacctccggtaatataggtcattttttgt 29346339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 259 - 302
Target Start/End: Complemental strand, 38132119 - 38132075
Alignment:
Q  259 agggttaatggtgctttactcc-tgtaatataggtcattttttgt 302  Q
    ||||||||||||| ||||| || ||||||||||||||||||||||    
T  38132119 agggttaatggtgttttaccccctgtaatataggtcattttttgt 38132075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 259 - 302
Target Start/End: Complemental strand, 38687569 - 38687525
Alignment:
Q  259 agggttaatggtgcttta-ctcctgtaatataggtcattttttgt 302  Q
    ||||||||||||| |||| | ||||||||||||||||||||||||    
T  38687569 agggttaatggtgttttatcccctgtaatataggtcattttttgt 38687525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 42; Significance: 0.000000000000007; HSPs: 31)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 253 - 302
Target Start/End: Complemental strand, 15710858 - 15710809
Alignment:
Q  253 taattaagggttaatggtgctttactcctgtaatataggtcattttttgt 302  Q
    ||||||||||||||||||||||||| | ||||||||||||||||||||||    
T  15710858 taattaagggttaatggtgctttacccttgtaatataggtcattttttgt 15710809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 259 - 302
Target Start/End: Complemental strand, 16555587 - 16555543
Alignment:
Q  259 agggttaatggtgctttactcc-tgtaatataggtcattttttgt 302  Q
    |||||||||||||||||||||| ||||||||||||||||||||||    
T  16555587 agggttaatggtgctttactccctgtaatataggtcattttttgt 16555543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 258 - 302
Target Start/End: Complemental strand, 24004809 - 24004764
Alignment:
Q  258 aagggttaatggtgctttactcct-gtaatataggtcattttttgt 302  Q
    |||||||||||||||||||| ||| |||||||||||||||||||||    
T  24004809 aagggttaatggtgctttaccccttgtaatataggtcattttttgt 24004764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 259 - 300
Target Start/End: Original strand, 25170955 - 25170996
Alignment:
Q  259 agggttaatggtgctttactcctgtaatataggtcatttttt 300  Q
    ||||||||||||| ||||| ||||||||||||||||||||||    
T  25170955 agggttaatggtgttttacccctgtaatataggtcatttttt 25170996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 258 - 302
Target Start/End: Complemental strand, 26399576 - 26399531
Alignment:
Q  258 aagggttaatggtgctttac-tcctgtaatataggtcattttttgt 302  Q
    |||||||||||||||||||| ||||||||||||||| |||||||||    
T  26399576 aagggttaatggtgctttacctcctgtaatataggttattttttgt 26399531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 254 - 299
Target Start/End: Complemental strand, 12277517 - 12277470
Alignment:
Q  254 aattaagggttaatggtgcttta--ctcctgtaatataggtcattttt 299  Q
    |||||||||||||||||||||||  | |||||||||||||||||||||    
T  12277517 aattaagggttaatggtgctttacccccctgtaatataggtcattttt 12277470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 255 - 302
Target Start/End: Complemental strand, 17724328 - 17724280
Alignment:
Q  255 attaagggttaatggtgctttactcc-tgtaatataggtcattttttgt 302  Q
    ||||||||||||||||| ||||| || ||||||||||||||||||||||    
T  17724328 attaagggttaatggtgttttaccccctgtaatataggtcattttttgt 17724280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 259 - 300
Target Start/End: Complemental strand, 36454542 - 36454499
Alignment:
Q  259 agggttaatggtgcttta--ctcctgtaatataggtcatttttt 300  Q
    ||||||||||||||||||  ||||||||||||||||||||||||    
T  36454542 agggttaatggtgctttatcctcctgtaatataggtcatttttt 36454499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 263 - 302
Target Start/End: Original strand, 18653822 - 18653861
Alignment:
Q  263 ttaatggtgctttactcctgtaatataggtcattttttgt 302  Q
    ||||||||| ||||| ||||||||||||||||||||||||    
T  18653822 ttaatggtgttttacccctgtaatataggtcattttttgt 18653861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 258 - 300
Target Start/End: Complemental strand, 26486828 - 26486785
Alignment:
Q  258 aagggttaatggtgctttactcc-tgtaatataggtcatttttt 300  Q
    |||||||||||||||||||| || ||||||||||||||||||||    
T  26486828 aagggttaatggtgctttaccccctgtaatataggtcatttttt 26486785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 260 - 302
Target Start/End: Complemental strand, 37847828 - 37847785
Alignment:
Q  260 gggttaatggtgctttactcc-tgtaatataggtcattttttgt 302  Q
    |||||||||||||||||| || ||||||||||||||||||||||    
T  37847828 gggttaatggtgctttaccccctgtaatataggtcattttttgt 37847785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 258 - 302
Target Start/End: Complemental strand, 43413120 - 43413074
Alignment:
Q  258 aagggttaatggtgctttac--tcctgtaatataggtcattttttgt 302  Q
    |||||||||||||| |||||  |||||||||||||||||||||||||    
T  43413120 aagggttaatggtgttttaccctcctgtaatataggtcattttttgt 43413074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 260 - 302
Target Start/End: Original strand, 46583826 - 46583869
Alignment:
Q  260 gggttaatggtgctttactc-ctgtaatataggtcattttttgt 302  Q
    |||||||||||||||||| | |||||||||||||||||||||||    
T  46583826 gggttaatggtgctttaccctctgtaatataggtcattttttgt 46583869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 256 - 299
Target Start/End: Complemental strand, 15961803 - 15961758
Alignment:
Q  256 ttaagggttaatggtgcttta--ctcctgtaatataggtcattttt 299  Q
    |||||||||||||||||||||  | |||||||||||||||||||||    
T  15961803 ttaagggttaatggtgctttacccccctgtaatataggtcattttt 15961758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 259 - 300
Target Start/End: Original strand, 16555324 - 16555366
Alignment:
Q  259 agggttaatggtgctttactcc-tgtaatataggtcatttttt 300  Q
    ||||||||||||||||||| || ||||||||||||||||||||    
T  16555324 agggttaatggtgctttaccccctgtaatataggtcatttttt 16555366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 259 - 302
Target Start/End: Original strand, 46208198 - 46208243
Alignment:
Q  259 agggttaatggtgctttact--cctgtaatataggtcattttttgt 302  Q
    |||||||||||||||||||   ||||||||||||||||||||||||    
T  46208198 agggttaatggtgctttacctccctgtaatataggtcattttttgt 46208243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 258 - 299
Target Start/End: Original strand, 52413119 - 52413161
Alignment:
Q  258 aagggttaatggtgctttactcc-tgtaatataggtcattttt 299  Q
    |||||||||||||||||||| || |||||||||||||||||||    
T  52413119 aagggttaatggtgctttaccccctgtaatataggtcattttt 52413161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 259 - 300
Target Start/End: Original strand, 1632318 - 1632359
Alignment:
Q  259 agggttaatggtgctttactcctgtaatataggtcatttttt 300  Q
    ||||||||||||| ||||| | ||||||||||||||||||||    
T  1632318 agggttaatggtgttttacccgtgtaatataggtcatttttt 1632359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 258 - 299
Target Start/End: Original strand, 3149735 - 3149776
Alignment:
Q  258 aagggttaatggtgctttactcctgtaatataggtcattttt 299  Q
    ||||||||||||| |||||  |||||||||||||||||||||    
T  3149735 aagggttaatggtactttaaccctgtaatataggtcattttt 3149776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 260 - 300
Target Start/End: Original strand, 7454889 - 7454930
Alignment:
Q  260 gggttaatggtgctttactcc-tgtaatataggtcatttttt 300  Q
    |||||||||||||||||| || ||||||||||||||||||||    
T  7454889 gggttaatggtgctttaccccctgtaatataggtcatttttt 7454930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 258 - 300
Target Start/End: Original strand, 35384223 - 35384267
Alignment:
Q  258 aagggttaatggtgctttactcc--tgtaatataggtcatttttt 300  Q
    |||||||||||||||||||| ||  ||||||||||||||||||||    
T  35384223 aagggttaatggtgctttacccccctgtaatataggtcatttttt 35384267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 257 - 299
Target Start/End: Complemental strand, 50721987 - 50721943
Alignment:
Q  257 taagggttaatggtgctttactcc--tgtaatataggtcattttt 299  Q
    ||||||||||||||||||||| ||  |||||||||||||||||||    
T  50721987 taagggttaatggtgctttacccccctgtaatataggtcattttt 50721943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 259 - 302
Target Start/End: Original strand, 10176436 - 10176480
Alignment:
Q  259 agggttaatggtgctttactcct-gtaatataggtcattttttgt 302  Q
    ||||||||||||||||||| ||  |||||||||||||||||||||    
T  10176436 agggttaatggtgctttaccccccgtaatataggtcattttttgt 10176480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 260 - 299
Target Start/End: Original strand, 12277188 - 12277228
Alignment:
Q  260 gggttaatggtgctttac-tcctgtaatataggtcattttt 299  Q
    |||||||||||| ||||| ||||||||||||||||||||||    
T  12277188 gggttaatggtgttttacctcctgtaatataggtcattttt 12277228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 258 - 298
Target Start/End: Complemental strand, 20159025 - 20158985
Alignment:
Q  258 aagggttaatggtgctttactcctgtaatataggtcatttt 298  Q
    |||||||||| ||| ||||| ||||||||||||||||||||    
T  20159025 aagggttaatagtgttttacccctgtaatataggtcatttt 20158985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 260 - 300
Target Start/End: Original strand, 27142720 - 27142760
Alignment:
Q  260 gggttaatggtgctttactcctgtaatataggtcatttttt 300  Q
    ||||||| |||||||||  ||||||||||||||||||||||    
T  27142720 gggttaagggtgctttatccctgtaatataggtcatttttt 27142760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 260 - 299
Target Start/End: Complemental strand, 35384513 - 35384473
Alignment:
Q  260 gggttaatggtgctttactcc-tgtaatataggtcattttt 299  Q
    |||||||||||||||||| || |||||||||||||||||||    
T  35384513 gggttaatggtgctttaccccctgtaatataggtcattttt 35384473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 259 - 302
Target Start/End: Original strand, 37847601 - 37847645
Alignment:
Q  259 agggttaatggtgctttactcc-tgtaatataggtcattttttgt 302  Q
    ||||||||||||||||||| || |||||||||| |||||||||||    
T  37847601 agggttaatggtgctttaccccatgtaatatagttcattttttgt 37847645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 260 - 299
Target Start/End: Complemental strand, 39160589 - 39160549
Alignment:
Q  260 gggttaatggtgctttactcc-tgtaatataggtcattttt 299  Q
    |||||||||||||||||| || |||||||||||||||||||    
T  39160589 gggttaatggtgctttaccccctgtaatataggtcattttt 39160549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 259 - 300
Target Start/End: Original strand, 48954952 - 48954995
Alignment:
Q  259 agggttaatggtgctttactcc--tgtaatataggtcatttttt 300  Q
    |||||||||||||||| |||||  ||||||||||||||||||||    
T  48954952 agggttaatggtgcttgactcccctgtaatataggtcatttttt 48954995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 259 - 299
Target Start/End: Original strand, 50956963 - 50957002
Alignment:
Q  259 agggttaatggtgctttactcctgtaatataggtcattttt 299  Q
    |||||||||||||||||| ||||||||||||||| ||||||    
T  50956963 agggttaatggtgcttta-tcctgtaatataggttattttt 50957002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 25)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 254 - 298
Target Start/End: Original strand, 21226720 - 21226764
Alignment:
Q  254 aattaagggttaatggtgctttactcctgtaatataggtcatttt 298  Q
    |||||||||||||||||||||||| ||||||||||||||||||||    
T  21226720 aattaagggttaatggtgctttacccctgtaatataggtcatttt 21226764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 258 - 299
Target Start/End: Original strand, 19376064 - 19376105
Alignment:
Q  258 aagggttaatggtgctttactcctgtaatataggtcattttt 299  Q
    |||||||||||||||||||| |||||||||||||||||||||    
T  19376064 aagggttaatggtgctttacccctgtaatataggtcattttt 19376105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 258 - 302
Target Start/End: Complemental strand, 2181605 - 2181561
Alignment:
Q  258 aagggttaatggtgctttactcctgtaatataggtcattttttgt 302  Q
    |||||||||||||||||||| |||||||||||||| |||||||||    
T  2181605 aagggttaatggtgctttacccctgtaatataggttattttttgt 2181561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 260 - 300
Target Start/End: Complemental strand, 10790390 - 10790350
Alignment:
Q  260 gggttaatggtgctttactcctgtaatataggtcatttttt 300  Q
    |||||||||||||||||| ||||||||||||||||||||||    
T  10790390 gggttaatggtgctttacccctgtaatataggtcatttttt 10790350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 241 - 300
Target Start/End: Original strand, 25562136 - 25562195
Alignment:
Q  241 aaattagaattataattaagggttaatggtgcttta-ctcctgtaatataggtcatttttt 300  Q
    ||||||| |||| ||||||||||||||||||||||| | ||||||||||||||||||||||    
T  25562136 aaattagtatta-aattaagggttaatggtgctttaccccctgtaatataggtcatttttt 25562195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 241 - 300
Target Start/End: Original strand, 26101650 - 26101709
Alignment:
Q  241 aaattagaattataattaagggttaatggtgcttta-ctcctgtaatataggtcatttttt 300  Q
    ||||||| |||| ||||||||||||||||||||||| | ||||||||||||||||||||||    
T  26101650 aaattagtatta-aattaagggttaatggtgctttaccccctgtaatataggtcatttttt 26101709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 258 - 302
Target Start/End: Complemental strand, 1310131 - 1310085
Alignment:
Q  258 aagggttaatggtgctttactcc--tgtaatataggtcattttttgt 302  Q
    |||||||||||||||||||||||  ||||||||||||||||||||||    
T  1310131 aagggttaatggtgctttactcccctgtaatataggtcattttttgt 1310085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 257 - 302
Target Start/End: Original strand, 7017067 - 7017113
Alignment:
Q  257 taagggttaatggtgctttactcc-tgtaatataggtcattttttgt 302  Q
    ||||||||||||||||||||| || ||||||||||||||||||||||    
T  7017067 taagggttaatggtgctttaccccctgtaatataggtcattttttgt 7017113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 251 - 302
Target Start/End: Complemental strand, 21604421 - 21604368
Alignment:
Q  251 tataattaagggttaatggtgctttactcc--tgtaatataggtcattttttgt 302  Q
    ||||||| ||||||||||||||||||| ||  ||||||||||||||||||||||    
T  21604421 tataatttagggttaatggtgctttacccccctgtaatataggtcattttttgt 21604368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 254 - 302
Target Start/End: Complemental strand, 19376253 - 19376204
Alignment:
Q  254 aattaagggttaatggtgcttta-ctcctgtaatataggtcattttttgt 302  Q
    ||||||||||||||||||||||| | ||| ||||||||||||||||||||    
T  19376253 aattaagggttaatggtgctttaccccctataatataggtcattttttgt 19376204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 259 - 302
Target Start/End: Original strand, 24602429 - 24602473
Alignment:
Q  259 agggttaatggtgctttactcct-gtaatataggtcattttttgt 302  Q
    ||||||||||||||||||| ||| |||||||||||||||||||||    
T  24602429 agggttaatggtgctttaccccttgtaatataggtcattttttgt 24602473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 256 - 291
Target Start/End: Original strand, 229547 - 229582
Alignment:
Q  256 ttaagggttaatggtgctttactcctgtaatatagg 291  Q
    |||||||||||||||||||||| |||||||||||||    
T  229547 ttaagggttaatggtgctttacccctgtaatatagg 229582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 260 - 302
Target Start/End: Complemental strand, 7017355 - 7017312
Alignment:
Q  260 gggttaatggtgctttactcc-tgtaatataggtcattttttgt 302  Q
    |||||||||||||||||| || ||||||||||||||||||||||    
T  7017355 gggttaatggtgctttaccccctgtaatataggtcattttttgt 7017312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 260 - 302
Target Start/End: Original strand, 7313451 - 7313494
Alignment:
Q  260 gggttaatggtgctttactcc-tgtaatataggtcattttttgt 302  Q
    |||||||||||||||||| || ||||||||||||||||||||||    
T  7313451 gggttaatggtgctttaccccctgtaatataggtcattttttgt 7313494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 241 - 299
Target Start/End: Original strand, 25567684 - 25567742
Alignment:
Q  241 aaattagaattataattaagggttaatggtgctttactc-ctgtaatataggtcattttt 299  Q
    ||||||| |||| |||||||||||||||||||||||| |  |||||||||||||||||||    
T  25567684 aaattagtatta-aattaagggttaatggtgctttaccctatgtaatataggtcattttt 25567742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 260 - 302
Target Start/End: Complemental strand, 33352672 - 33352629
Alignment:
Q  260 gggttaatggtgctttactcc-tgtaatataggtcattttttgt 302  Q
    |||||||||||||||||| || ||||||||||||||||||||||    
T  33352672 gggttaatggtgctttaccccctgtaatataggtcattttttgt 33352629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 257 - 302
Target Start/End: Original strand, 1309783 - 1309829
Alignment:
Q  257 taagggttaatggtgctttactcc-tgtaatataggtcattttttgt 302  Q
    ||||||||||||||| ||||| || ||||||||||||||||||||||    
T  1309783 taagggttaatggtgatttaccccctgtaatataggtcattttttgt 1309829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 258 - 296
Target Start/End: Complemental strand, 7998542 - 7998504
Alignment:
Q  258 aagggttaatggtgctttactcctgtaatataggtcatt 296  Q
    ||||||||||||| |||||||||||||||||| ||||||    
T  7998542 aagggttaatggtactttactcctgtaatatatgtcatt 7998504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 259 - 302
Target Start/End: Original strand, 10366400 - 10366445
Alignment:
Q  259 agggttaatggtgctttactcc--tgtaatataggtcattttttgt 302  Q
    ||||||||||||||||||| ||  ||||||||||||||||||||||    
T  10366400 agggttaatggtgctttacccccctgtaatataggtcattttttgt 10366445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 260 - 302
Target Start/End: Complemental strand, 15881387 - 15881345
Alignment:
Q  260 gggttaatggtgctttactcctgtaatataggtcattttttgt 302  Q
    |||||||| |||||||||  |||||||||||||||||||||||    
T  15881387 gggttaatagtgctttacctctgtaatataggtcattttttgt 15881345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 261 - 302
Target Start/End: Original strand, 19417947 - 19417989
Alignment:
Q  261 ggttaatggtgctttactcc-tgtaatataggtcattttttgt 302  Q
    ||||||||||||||||| || ||||||||||||||||||||||    
T  19417947 ggttaatggtgctttaccccctgtaatataggtcattttttgt 19417989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 258 - 299
Target Start/End: Complemental strand, 29239760 - 29239718
Alignment:
Q  258 aagggttaatggtgctttactc-ctgtaatataggtcattttt 299  Q
    |||||||||||||||||||| | ||||||||||||||||||||    
T  29239760 aagggttaatggtgctttacccactgtaatataggtcattttt 29239718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 258 - 299
Target Start/End: Original strand, 31656365 - 31656406
Alignment:
Q  258 aagggttaatggtgctttactcctgtaatataggtcattttt 299  Q
    |||||||||| ||||||||| ||||||||||| |||||||||    
T  31656365 aagggttaatagtgctttacccctgtaatatatgtcattttt 31656406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 251 - 299
Target Start/End: Original strand, 31826206 - 31826255
Alignment:
Q  251 tataattaagggttaatggtgcttta-ctcctgtaatataggtcattttt 299  Q
    |||||| ||||||||||||||||||| | |||||||||||||| ||||||    
T  31826206 tataataaagggttaatggtgctttaccccctgtaatataggtgattttt 31826255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 256 - 299
Target Start/End: Complemental strand, 31733348 - 31733302
Alignment:
Q  256 ttaagggttaatggtgctttactcc---tgtaatataggtcattttt 299  Q
    |||||||||||||||||||||| ||   |||||||||||||||||||    
T  31733348 ttaagggttaatggtgctttaccccccttgtaatataggtcattttt 31733302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 49)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 254 - 302
Target Start/End: Original strand, 1421425 - 1421473
Alignment:
Q  254 aattaagggttaatggtgctttactcctgtaatataggtcattttttgt 302  Q
    |||||||||||||||||||||||| ||||||||||| ||||||||||||    
T  1421425 aattaagggttaatggtgctttacccctgtaatatatgtcattttttgt 1421473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 256 - 302
Target Start/End: Original strand, 2680038 - 2680084
Alignment:
Q  256 ttaagggttaatggtgctttactcctgtaatataggtcattttttgt 302  Q
    |||||||||||||||||||| | ||||||||||||||||||||||||    
T  2680038 ttaagggttaatggtgctttccccctgtaatataggtcattttttgt 2680084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 258 - 299
Target Start/End: Complemental strand, 51102369 - 51102328
Alignment:
Q  258 aagggttaatggtgctttactcctgtaatataggtcattttt 299  Q
    |||||||||||||||||||| |||||||||||||||||||||    
T  51102369 aagggttaatggtgctttacccctgtaatataggtcattttt 51102328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 256 - 300
Target Start/End: Original strand, 30908581 - 30908625
Alignment:
Q  256 ttaagggttaatggtgctttactcctgtaatataggtcatttttt 300  Q
    |||||||||||||||||||||| ||||||||||| ||||||||||    
T  30908581 ttaagggttaatggtgctttacccctgtaatatatgtcatttttt 30908625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 259 - 302
Target Start/End: Complemental strand, 31341499 - 31341455
Alignment:
Q  259 agggttaatggtgctttac-tcctgtaatataggtcattttttgt 302  Q
    ||||||||||||||||||| |||||||||||||||||||||||||    
T  31341499 agggttaatggtgctttacctcctgtaatataggtcattttttgt 31341455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 254 - 299
Target Start/End: Complemental strand, 35434135 - 35434089
Alignment:
Q  254 aattaagggttaatggtgcttta-ctcctgtaatataggtcattttt 299  Q
    ||||||||||||||||||||||| | |||||||||||||||||||||    
T  35434135 aattaagggttaatggtgctttaccccctgtaatataggtcattttt 35434089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 262 - 300
Target Start/End: Original strand, 46550807 - 46550845
Alignment:
Q  262 gttaatggtgctttactcctgtaatataggtcatttttt 300  Q
    |||||||||||||||| ||||||||||||||||||||||    
T  46550807 gttaatggtgctttacccctgtaatataggtcatttttt 46550845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 258 - 302
Target Start/End: Original strand, 31341224 - 31341269
Alignment:
Q  258 aagggttaatggtgcttta-ctcctgtaatataggtcattttttgt 302  Q
    ||||||||||||||||||| | ||||||||||||||||||||||||    
T  31341224 aagggttaatggtgctttatcccctgtaatataggtcattttttgt 31341269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 258 - 302
Target Start/End: Original strand, 53523390 - 53523435
Alignment:
Q  258 aagggttaatggtgctttac-tcctgtaatataggtcattttttgt 302  Q
    |||||||||||||||||||| || ||||||||||||||||||||||    
T  53523390 aagggttaatggtgctttacctcttgtaatataggtcattttttgt 53523435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 258 - 302
Target Start/End: Complemental strand, 55090302 - 55090257
Alignment:
Q  258 aagggttaatggtgctttactcc-tgtaatataggtcattttttgt 302  Q
    |||||||||||||||||||| || ||||||||||||||||||||||    
T  55090302 aagggttaatggtgctttaccccctgtaatataggtcattttttgt 55090257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 259 - 302
Target Start/End: Complemental strand, 21550039 - 21549995
Alignment:
Q  259 agggttaatggtgctttact-cctgtaatataggtcattttttgt 302  Q
    |||||||||||||||||||  ||||||||||||||||||||||||    
T  21550039 agggttaatggtgctttaccgcctgtaatataggtcattttttgt 21549995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 257 - 302
Target Start/End: Original strand, 24286149 - 24286196
Alignment:
Q  257 taagggttaatggtgctttactcc--tgtaatataggtcattttttgt 302  Q
    ||||||||||||||||||||| ||  ||||||||||||||||||||||    
T  24286149 taagggttaatggtgctttaccccactgtaatataggtcattttttgt 24286196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 259 - 299
Target Start/End: Complemental strand, 35359699 - 35359659
Alignment:
Q  259 agggttaatggtgctttactcctgtaatataggtcattttt 299  Q
    ||||||||||||| ||||| |||||||||||||||||||||    
T  35359699 agggttaatggtgttttacccctgtaatataggtcattttt 35359659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 254 - 299
Target Start/End: Original strand, 39846369 - 39846416
Alignment:
Q  254 aattaagggttaatggtgctttactcc--tgtaatataggtcattttt 299  Q
    |||||||||||||||||||||||| ||  |||||||||||||||||||    
T  39846369 aattaagggttaatggtgctttacccccttgtaatataggtcattttt 39846416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 260 - 299
Target Start/End: Complemental strand, 13468400 - 13468361
Alignment:
Q  260 gggttaatggtgctttactcctgtaatataggtcattttt 299  Q
    |||||||||||| ||||| |||||||||||||||||||||    
T  13468400 gggttaatggtgttttacccctgtaatataggtcattttt 13468361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 254 - 300
Target Start/End: Original strand, 19301173 - 19301220
Alignment:
Q  254 aattaagggttaatggtgctttactcc-tgtaatataggtcatttttt 300  Q
    |||||||||||||||||| ||||| || ||||||||||||||||||||    
T  19301173 aattaagggttaatggtgttttaccccctgtaatataggtcatttttt 19301220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 260 - 302
Target Start/End: Original strand, 33898073 - 33898116
Alignment:
Q  260 gggttaatggtgctttactcc-tgtaatataggtcattttttgt 302  Q
    |||||||||||||||||| || ||||||||||||||||||||||    
T  33898073 gggttaatggtgctttaccccctgtaatataggtcattttttgt 33898116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 260 - 302
Target Start/End: Original strand, 40066706 - 40066749
Alignment:
Q  260 gggttaatggtgctttactcc-tgtaatataggtcattttttgt 302  Q
    |||||||||||||||||| || ||||||||||||||||||||||    
T  40066706 gggttaatggtgctttaccccctgtaatataggtcattttttgt 40066749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 254 - 302
Target Start/End: Complemental strand, 41747506 - 41747456
Alignment:
Q  254 aattaagggttaatggtgctttactcc--tgtaatataggtcattttttgt 302  Q
    ||||||||||||||| |||||||| ||  ||||||||||||||||||||||    
T  41747506 aattaagggttaatgatgctttacccccctgtaatataggtcattttttgt 41747456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 257 - 299
Target Start/End: Complemental strand, 54012648 - 54012605
Alignment:
Q  257 taagggttaatggtgctttactcc-tgtaatataggtcattttt 299  Q
    ||||||||||||||||||||| || |||||||||||||||||||    
T  54012648 taagggttaatggtgctttaccccctgtaatataggtcattttt 54012605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 259 - 302
Target Start/End: Complemental strand, 3820769 - 3820724
Alignment:
Q  259 agggttaatggtgctttac--tcctgtaatataggtcattttttgt 302  Q
    ||||||||| |||||||||  |||||||||||||||||||||||||    
T  3820769 agggttaatagtgctttaccctcctgtaatataggtcattttttgt 3820724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 259 - 302
Target Start/End: Original strand, 15096523 - 15096568
Alignment:
Q  259 agggttaatggtgctttactcc--tgtaatataggtcattttttgt 302  Q
    ||||||||||||||||||| ||  ||||||||||||||||||||||    
T  15096523 agggttaatggtgctttacccccctgtaatataggtcattttttgt 15096568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 258 - 299
Target Start/End: Original strand, 17261023 - 17261065
Alignment:
Q  258 aagggttaatggtgctttactcc-tgtaatataggtcattttt 299  Q
    |||||||||||||||||||| || |||||||||||||||||||    
T  17261023 aagggttaatggtgctttaccccctgtaatataggtcattttt 17261065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 259 - 297
Target Start/End: Original strand, 19598734 - 19598772
Alignment:
Q  259 agggttaatggtgctttactcctgtaatataggtcattt 297  Q
    |||||||| |||||||||| |||||||||||||||||||    
T  19598734 agggttaaaggtgctttacccctgtaatataggtcattt 19598772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 259 - 302
Target Start/End: Original strand, 25924040 - 25924085
Alignment:
Q  259 agggttaatggtgctttactcc--tgtaatataggtcattttttgt 302  Q
    ||||||||||||||||||| ||  ||||||||||||||||||||||    
T  25924040 agggttaatggtgctttacccccctgtaatataggtcattttttgt 25924085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 259 - 300
Target Start/End: Original strand, 35359471 - 35359513
Alignment:
Q  259 agggttaatggtgctttactcc-tgtaatataggtcatttttt 300  Q
    ||||||||||||||||||| || ||||||||||||||||||||    
T  35359471 agggttaatggtgctttaccccctgtaatataggtcatttttt 35359513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 259 - 302
Target Start/End: Original strand, 41747305 - 41747350
Alignment:
Q  259 agggttaatggtgctttactcc--tgtaatataggtcattttttgt 302  Q
    ||||||||||||||||||| ||  ||||||||||||||||||||||    
T  41747305 agggttaatggtgctttacccccctgtaatataggtcattttttgt 41747350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 259 - 302
Target Start/End: Original strand, 45333847 - 45333892
Alignment:
Q  259 agggttaatggtgctttac--tcctgtaatataggtcattttttgt 302  Q
    ||||||||||||| |||||  |||||||||||||||||||||||||    
T  45333847 agggttaatggtgttttaccctcctgtaatataggtcattttttgt 45333892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 259 - 300
Target Start/End: Original strand, 48418653 - 48418695
Alignment:
Q  259 agggttaatggtgctttactcc-tgtaatataggtcatttttt 300  Q
    ||||||||||||||||||| || ||||||||||||||||||||    
T  48418653 agggttaatggtgctttaccccctgtaatataggtcatttttt 48418695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 257 - 302
Target Start/End: Original strand, 52491570 - 52491616
Alignment:
Q  257 taagggttaatggtgctttactcc-tgtaatataggtcattttttgt 302  Q
    ||||||||||||||| ||||| || ||||||||||||||||||||||    
T  52491570 taagggttaatggtgttttaccccatgtaatataggtcattttttgt 52491616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 259 - 299
Target Start/End: Complemental strand, 1351525 - 1351484
Alignment:
Q  259 agggttaatggtgctttactcc-tgtaatataggtcattttt 299  Q
    ||||||||||||||||||| || |||||||||||||||||||    
T  1351525 agggttaatggtgctttaccccctgtaatataggtcattttt 1351484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 259 - 299
Target Start/End: Original strand, 11761081 - 11761122
Alignment:
Q  259 agggttaatggtgctttactcc-tgtaatataggtcattttt 299  Q
    ||||||||||||||||||| || |||||||||||||||||||    
T  11761081 agggttaatggtgctttaccccctgtaatataggtcattttt 11761122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 258 - 302
Target Start/End: Complemental strand, 19757160 - 19757113
Alignment:
Q  258 aagggttaatggtgctttactcc---tgtaatataggtcattttttgt 302  Q
    |||||||||||||||||||| ||   ||||||||||||||||||||||    
T  19757160 aagggttaatggtgctttaccccccctgtaatataggtcattttttgt 19757113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 261 - 299
Target Start/End: Original strand, 23526731 - 23526771
Alignment:
Q  261 ggttaatggtgctttac--tcctgtaatataggtcattttt 299  Q
    |||||||||||||||||  ||||||||||||||||||||||    
T  23526731 ggttaatggtgctttaccctcctgtaatataggtcattttt 23526771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 251 - 299
Target Start/End: Original strand, 30271535 - 30271584
Alignment:
Q  251 tataattaagggttaatggtgctttactc-ctgtaatataggtcattttt 299  Q
    ||||||||||||||||| || |||||| | ||||||||||||||||||||    
T  30271535 tataattaagggttaatagttctttaccctctgtaatataggtcattttt 30271584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 259 - 299
Target Start/End: Complemental strand, 39846638 - 39846597
Alignment:
Q  259 agggttaatggtgctttactcc-tgtaatataggtcattttt 299  Q
    ||||||||||||||||||| || |||||||||||||||||||    
T  39846638 agggttaatggtgctttaccccctgtaatataggtcattttt 39846597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 260 - 302
Target Start/End: Complemental strand, 44512543 - 44512499
Alignment:
Q  260 gggttaatggtgctttactcc--tgtaatataggtcattttttgt 302  Q
    |||||||||||||||||| ||  ||||||||||||||||||||||    
T  44512543 gggttaatggtgctttacccccctgtaatataggtcattttttgt 44512499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 258 - 302
Target Start/End: Original strand, 53667678 - 53667723
Alignment:
Q  258 aagggttaatggtgctttactcc-tgtaatataggtcattttttgt 302  Q
    |||||||||||||| ||||| || ||||||||||||||||||||||    
T  53667678 aagggttaatggtgatttaccccctgtaatataggtcattttttgt 53667723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 261 - 302
Target Start/End: Complemental strand, 53667832 - 53667791
Alignment:
Q  261 ggttaatggtgctttactcctgtaatataggtcattttttgt 302  Q
    |||||| |||||||||| ||||||||||||||||| ||||||    
T  53667832 ggttaacggtgctttacccctgtaatataggtcatattttgt 53667791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 258 - 302
Target Start/End: Original strand, 54012356 - 54012401
Alignment:
Q  258 aagggttaatggtgctttactcc-tgtaatataggtcattttttgt 302  Q
    |||||||||||||| ||||| || ||||||||||||||||||||||    
T  54012356 aagggttaatggtgttttaccccatgtaatataggtcattttttgt 54012401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 259 - 302
Target Start/End: Original strand, 3820493 - 3820537
Alignment:
Q  259 agggttaatggtgctttactcc-tgtaatataggtcattttttgt 302  Q
    ||||||||||||| ||||| || ||||||||||||||||||||||    
T  3820493 agggttaatggtgttttaccccctgtaatataggtcattttttgt 3820537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 259 - 300
Target Start/End: Complemental strand, 3841362 - 3841319
Alignment:
Q  259 agggttaatggtgctttactcc--tgtaatataggtcatttttt 300  Q
    ||||||||||||||||||| ||  ||||||||||||||||||||    
T  3841362 agggttaatggtgctttacccccctgtaatataggtcatttttt 3841319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 259 - 299
Target Start/End: Original strand, 13468247 - 13468287
Alignment:
Q  259 agggttaatggtgctttactcctgtaatataggtcattttt 299  Q
    ||||||||||||||||||| || |||||||| |||||||||    
T  13468247 agggttaatggtgctttaccccagtaatatatgtcattttt 13468287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 258 - 302
Target Start/End: Original strand, 23388723 - 23388766
Alignment:
Q  258 aagggttaatggtgctttactcctgtaatataggtcattttttgt 302  Q
    |||||||||||||| ||||  ||||||||||||||||||||||||    
T  23388723 aagggttaatggtgttttag-cctgtaatataggtcattttttgt 23388766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 260 - 300
Target Start/End: Complemental strand, 23388953 - 23388913
Alignment:
Q  260 gggttaatggtgctttactcctgtaatataggtcatttttt 300  Q
    |||||||||||||||||| ||||||||| | ||||||||||    
T  23388953 gggttaatggtgctttacccctgtaatacatgtcatttttt 23388913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 261 - 302
Target Start/End: Original strand, 33887072 - 33887115
Alignment:
Q  261 ggttaatggtgctttactcc--tgtaatataggtcattttttgt 302  Q
    ||||||||||||||||| ||  ||||||||||||||||||||||    
T  33887072 ggttaatggtgctttacccccctgtaatataggtcattttttgt 33887115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 257 - 300
Target Start/End: Complemental strand, 41301338 - 41301294
Alignment:
Q  257 taagggttaatggtgcttta-ctcctgtaatataggtcatttttt 300  Q
    |||||||||||||||||||| | ||||||||||| ||||||||||    
T  41301338 taagggttaatggtgctttaccccctgtaatatatgtcatttttt 41301294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 261 - 300
Target Start/End: Original strand, 46993874 - 46993914
Alignment:
Q  261 ggttaatggtgctttac-tcctgtaatataggtcatttttt 300  Q
    ||||||||||| ||||| |||||||||||||||||||||||    
T  46993874 ggttaatggtgttttacctcctgtaatataggtcatttttt 46993914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 259 - 302
Target Start/End: Complemental strand, 54087788 - 54087744
Alignment:
Q  259 agggttaatggtgctttactcc-tgtaatataggtcattttttgt 302  Q
    ||||||||||||| ||||| || ||||||||||||||||||||||    
T  54087788 agggttaatggtgttttaccccctgtaatataggtcattttttgt 54087744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 39)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 259 - 302
Target Start/End: Complemental strand, 12144837 - 12144794
Alignment:
Q  259 agggttaatggtgctttactcctgtaatataggtcattttttgt 302  Q
    ||||||||||||||||||| ||||||||||||||||||||||||    
T  12144837 agggttaatggtgctttacccctgtaatataggtcattttttgt 12144794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 257 - 299
Target Start/End: Complemental strand, 23981410 - 23981368
Alignment:
Q  257 taagggttaatggtgctttactcctgtaatataggtcattttt 299  Q
    ||||||||||||||||||||| |||||||||||||||||||||    
T  23981410 taagggttaatggtgctttacccctgtaatataggtcattttt 23981368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 260 - 302
Target Start/End: Original strand, 48613061 - 48613103
Alignment:
Q  260 gggttaatggtgctttactcctgtaatataggtcattttttgt 302  Q
    |||||||||||||||||| ||||||||||||||||||||||||    
T  48613061 gggttaatggtgctttacccctgtaatataggtcattttttgt 48613103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 258 - 302
Target Start/End: Original strand, 9884953 - 9884997
Alignment:
Q  258 aagggttaatggtgctttactcctgtaatataggtcattttttgt 302  Q
    |||||||||||||| ||||| ||||||||||||||||||||||||    
T  9884953 aagggttaatggtgttttacccctgtaatataggtcattttttgt 9884997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 256 - 302
Target Start/End: Original strand, 26144154 - 26144201
Alignment:
Q  256 ttaagggttaatggtgctttactcc-tgtaatataggtcattttttgt 302  Q
    |||||||||||||||||||||| || ||||||||||||||||||||||    
T  26144154 ttaagggttaatggtgctttaccccctgtaatataggtcattttttgt 26144201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 256 - 302
Target Start/End: Complemental strand, 46360954 - 46360907
Alignment:
Q  256 ttaagggttaatggtgctttactcc-tgtaatataggtcattttttgt 302  Q
    |||||||||||||||||||||| || ||||||||||||||||||||||    
T  46360954 ttaagggttaatggtgctttaccccctgtaatataggtcattttttgt 46360907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 259 - 300
Target Start/End: Complemental strand, 35904910 - 35904868
Alignment:
Q  259 agggttaatggtgctttactcc-tgtaatataggtcatttttt 300  Q
    |||||||||||||||||||||| ||||||||||||||||||||    
T  35904910 agggttaatggtgctttactccctgtaatataggtcatttttt 35904868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 261 - 302
Target Start/End: Complemental strand, 54097325 - 54097284
Alignment:
Q  261 ggttaatggtgctttactcctgtaatataggtcattttttgt 302  Q
    ||||||||||| ||||| ||||||||||||||||||||||||    
T  54097325 ggttaatggtgttttacccctgtaatataggtcattttttgt 54097284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 259 - 302
Target Start/End: Original strand, 3475485 - 3475529
Alignment:
Q  259 agggttaatggtgctttactcc-tgtaatataggtcattttttgt 302  Q
    ||||||||||||||||||| || ||||||||||||||||||||||    
T  3475485 agggttaatggtgctttaccccctgtaatataggtcattttttgt 3475529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 259 - 302
Target Start/End: Original strand, 12878674 - 12878718
Alignment:
Q  259 agggttaatggtgctttactcc-tgtaatataggtcattttttgt 302  Q
    ||||||||||||||||||| || ||||||||||||||||||||||    
T  12878674 agggttaatggtgctttaccccctgtaatataggtcattttttgt 12878718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 259 - 302
Target Start/End: Complemental strand, 13033184 - 13033140
Alignment:
Q  259 agggttaatggtgctttactcc-tgtaatataggtcattttttgt 302  Q
    ||||||||||||||||||| || ||||||||||||||||||||||    
T  13033184 agggttaatggtgctttaccccctgtaatataggtcattttttgt 13033140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 259 - 302
Target Start/End: Original strand, 15782261 - 15782305
Alignment:
Q  259 agggttaatggtgctttactcct-gtaatataggtcattttttgt 302  Q
    ||||||||||||||||||| ||| |||||||||||||||||||||    
T  15782261 agggttaatggtgctttaccccttgtaatataggtcattttttgt 15782305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 256 - 302
Target Start/End: Complemental strand, 7086127 - 7086080
Alignment:
Q  256 ttaagggttaatggtgctttactcc-tgtaatataggtcattttttgt 302  Q
    |||||||||||||||| ||||| || ||||||||||||||||||||||    
T  7086127 ttaagggttaatggtgttttaccccctgtaatataggtcattttttgt 7086080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 256 - 302
Target Start/End: Original strand, 23981118 - 23981165
Alignment:
Q  256 ttaagggttaatggtgctttac-tcctgtaatataggtcattttttgt 302  Q
    |||||||||||||||| ||||| || ||||||||||||||||||||||    
T  23981118 ttaagggttaatggtgttttacctcatgtaatataggtcattttttgt 23981165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 257 - 299
Target Start/End: Complemental strand, 36405913 - 36405870
Alignment:
Q  257 taagggttaatggtgctttactcc-tgtaatataggtcattttt 299  Q
    ||||||||||||||||||||| || |||||||||||||||||||    
T  36405913 taagggttaatggtgctttaccccctgtaatataggtcattttt 36405870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 258 - 300
Target Start/End: Original strand, 50084820 - 50084865
Alignment:
Q  258 aagggttaatggtgctttac---tcctgtaatataggtcatttttt 300  Q
    ||||||||||||||||||||   |||||||||||||||||||||||    
T  50084820 aagggttaatggtgctttacccctcctgtaatataggtcatttttt 50084865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 258 - 300
Target Start/End: Original strand, 54097098 - 54097141
Alignment:
Q  258 aagggttaatggtgctttactcc-tgtaatataggtcatttttt 300  Q
    |||||||||||||||||||| || ||||||||||||||||||||    
T  54097098 aagggttaatggtgctttaccccctgtaatataggtcatttttt 54097141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 258 - 299
Target Start/End: Original strand, 1952733 - 1952775
Alignment:
Q  258 aagggttaatggtgctttactcc-tgtaatataggtcattttt 299  Q
    |||||||||||||||||||| || |||||||||||||||||||    
T  1952733 aagggttaatggtgctttaccccctgtaatataggtcattttt 1952775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 255 - 302
Target Start/End: Original strand, 5419981 - 5420030
Alignment:
Q  255 attaagggttaatggtgctttactcc--tgtaatataggtcattttttgt 302  Q
    |||| |||||||||||| ||||||||  ||||||||||||||||||||||    
T  5419981 attatgggttaatggtgttttactcccctgtaatataggtcattttttgt 5420030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 263 - 297
Target Start/End: Complemental strand, 7309538 - 7309504
Alignment:
Q  263 ttaatggtgctttactcctgtaatataggtcattt 297  Q
    ||||||||||||||| |||||||||||||||||||    
T  7309538 ttaatggtgctttacccctgtaatataggtcattt 7309504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 261 - 302
Target Start/End: Original strand, 8974270 - 8974312
Alignment:
Q  261 ggttaatggtgcttta-ctcctgtaatataggtcattttttgt 302  Q
    |||||||||||||||| | ||||||||||||||||||||||||    
T  8974270 ggttaatggtgctttatcccctgtaatataggtcattttttgt 8974312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 261 - 302
Target Start/End: Complemental strand, 20514943 - 20514901
Alignment:
Q  261 ggttaatggtgctttactcc-tgtaatataggtcattttttgt 302  Q
    ||||||||||||||||| || ||||||||||||||||||||||    
T  20514943 ggttaatggtgctttaccccctgtaatataggtcattttttgt 20514901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 259 - 302
Target Start/End: Complemental strand, 24670784 - 24670739
Alignment:
Q  259 agggttaatggtgctttactcc--tgtaatataggtcattttttgt 302  Q
    ||||||||||||||||||| ||  ||||||||||||||||||||||    
T  24670784 agggttaatggtgctttacccccctgtaatataggtcattttttgt 24670739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 258 - 299
Target Start/End: Complemental strand, 35370447 - 35370405
Alignment:
Q  258 aagggttaatggtgctttactcc-tgtaatataggtcattttt 299  Q
    |||||||||||||||||||| || |||||||||||||||||||    
T  35370447 aagggttaatggtgctttaccccctgtaatataggtcattttt 35370405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 258 - 300
Target Start/End: Complemental strand, 52439624 - 52439582
Alignment:
Q  258 aagggttaatggtgctttactcctgtaatataggtcatttttt 300  Q
    ||||||||||||||||||||  |||||||||| ||||||||||    
T  52439624 aagggttaatggtgctttacctctgtaatatatgtcatttttt 52439582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 250 - 298
Target Start/End: Original strand, 6439175 - 6439224
Alignment:
Q  250 ttataattaagggttaatggtgctttactcc-tgtaatataggtcatttt 298  Q
    |||||||| ||||||||| ||||||||| || ||||||||||||||||||    
T  6439175 ttataatttagggttaatagtgctttaccccctgtaatataggtcatttt 6439224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 262 - 302
Target Start/End: Complemental strand, 30961862 - 30961821
Alignment:
Q  262 gttaatggtgctttac-tcctgtaatataggtcattttttgt 302  Q
    ||||||| |||||||| |||||||||||||||||||||||||    
T  30961862 gttaatgatgctttacctcctgtaatataggtcattttttgt 30961821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 258 - 302
Target Start/End: Original strand, 30966610 - 30966655
Alignment:
Q  258 aagggttaatggtgcttta-ctcctgtaatataggtcattttttgt 302  Q
    ||||||||||||||||||| | ||| ||||||||||||||||||||    
T  30966610 aagggttaatggtgctttaccccctataatataggtcattttttgt 30966655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 262 - 302
Target Start/End: Complemental strand, 31592800 - 31592759
Alignment:
Q  262 gttaatggtgctttac-tcctgtaatataggtcattttttgt 302  Q
    |||||||||| ||||| |||||||||||||||||||||||||    
T  31592800 gttaatggtgttttacctcctgtaatataggtcattttttgt 31592759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 259 - 299
Target Start/End: Original strand, 36405658 - 36405699
Alignment:
Q  259 agggttaatggtgctttactcc-tgtaatataggtcattttt 299  Q
    ||||||||||||||||||| || |||||||||||||||||||    
T  36405658 agggttaatggtgctttaccccctgtaatataggtcattttt 36405699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 258 - 302
Target Start/End: Original strand, 52439337 - 52439382
Alignment:
Q  258 aagggttaatggtgctttactcc-tgtaatataggtcattttttgt 302  Q
    |||||||||||||| ||||| || ||||||||||||||||||||||    
T  52439337 aagggttaatggtgttttaccccctgtaatataggtcattttttgt 52439382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 259 - 302
Target Start/End: Complemental strand, 3475752 - 3475708
Alignment:
Q  259 agggttaatggtgctttactcc-tgtaatataggtcattttttgt 302  Q
    ||||||||||||||||| | || ||||||||||||||||||||||    
T  3475752 agggttaatggtgctttgccccctgtaatataggtcattttttgt 3475708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 259 - 302
Target Start/End: Original strand, 7085841 - 7085885
Alignment:
Q  259 agggttaatggtgctttactcc-tgtaatataggtcattttttgt 302  Q
    ||||||||| |||||||||||| ||||||||| ||||||||||||    
T  7085841 agggttaatagtgctttactccctgtaatatatgtcattttttgt 7085885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 257 - 297
Target Start/End: Complemental strand, 17696441 - 17696401
Alignment:
Q  257 taagggttaatggtgctttactcctgtaatataggtcattt 297  Q
    ||||||||||| ||| ||||| |||||||||||||||||||    
T  17696441 taagggttaatagtgttttacccctgtaatataggtcattt 17696401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 258 - 302
Target Start/End: Original strand, 24560509 - 24560553
Alignment:
Q  258 aagggttaatggtgctttactcctgtaatataggtcattttttgt 302  Q
    |||||||||||||| ||||  |||||||||||||| |||||||||    
T  24560509 aagggttaatggtgttttatccctgtaatataggttattttttgt 24560553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 259 - 302
Target Start/End: Original strand, 28292052 - 28292096
Alignment:
Q  259 agggttaatggtgctttactcc-tgtaatataggtcattttttgt 302  Q
    ||||||||||||| ||||| || ||||||||||||||||||||||    
T  28292052 agggttaatggtgttttaccccctgtaatataggtcattttttgt 28292096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 249 - 302
Target Start/End: Original strand, 31110241 - 31110296
Alignment:
Q  249 attataattaagggttaatggtgctttactcc--tgtaatataggtcattttttgt 302  Q
    |||| |||| ||||||||||||| ||||| ||  ||||||||||||||||||||||    
T  31110241 attaaaatttagggttaatggtgttttacccccctgtaatataggtcattttttgt 31110296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 259 - 298
Target Start/End: Complemental strand, 35804124 - 35804084
Alignment:
Q  259 agggttaatggtgctttactcc-tgtaatataggtcatttt 298  Q
    ||||||||||||||||||| || ||||||||||||||||||    
T  35804124 agggttaatggtgctttacaccctgtaatataggtcatttt 35804084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 258 - 297
Target Start/End: Complemental strand, 47858488 - 47858448
Alignment:
Q  258 aagggttaatggtgcttta-ctcctgtaatataggtcattt 297  Q
    ||||||||||||||||||| | |||||||||||||||||||    
T  47858488 aagggttaatggtgctttaccccctgtaatataggtcattt 47858448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0334 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 2)
Name: scaffold0334
Description:

Target: scaffold0334; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 260 - 302
Target Start/End: Complemental strand, 4357 - 4315
Alignment:
Q  260 gggttaatggtgctttactcctgtaatataggtcattttttgt 302  Q
    |||||||||||||||||| ||||||||||||||||||||||||    
T  4357 gggttaatggtgctttacccctgtaatataggtcattttttgt 4315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0334; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 254 - 299
Target Start/End: Original strand, 4066 - 4111
Alignment:
Q  254 aattaagggttaatggtgctttactcctgtaatataggtcattttt 299  Q
    |||||||||||||||||| ||||| ||||||||||| |||||||||    
T  4066 aattaagggttaatggtgatttacccctgtaatataagtcattttt 4111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 256 - 302
Target Start/End: Complemental strand, 342697 - 342651
Alignment:
Q  256 ttaagggttaatggtgctttactcctgtaatataggtcattttttgt 302  Q
    |||||||||||||||||||||| ||| ||||||||||||||||||||    
T  342697 ttaagggttaatggtgctttacccctctaatataggtcattttttgt 342651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 37; Significance: 0.000000000007; HSPs: 41)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 251 - 302
Target Start/End: Complemental strand, 8898498 - 8898446
Alignment:
Q  251 tataattaagggttaatggtgcttta-ctcctgtaatataggtcattttttgt 302  Q
    |||| ||||||||||||||||||||| ||||| ||||||||||||||||||||    
T  8898498 tatatttaagggttaatggtgctttacctcctataatataggtcattttttgt 8898446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 259 - 299
Target Start/End: Complemental strand, 43015258 - 43015218
Alignment:
Q  259 agggttaatggtgctttactcctgtaatataggtcattttt 299  Q
    ||||||||||||||||||| |||||||||||||||||||||    
T  43015258 agggttaatggtgctttacccctgtaatataggtcattttt 43015218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 260 - 302
Target Start/End: Original strand, 8467207 - 8467250
Alignment:
Q  260 gggttaatggtgctttactcc-tgtaatataggtcattttttgt 302  Q
    ||||||||||||||||||||| ||||||||||||||||||||||    
T  8467207 gggttaatggtgctttactccctgtaatataggtcattttttgt 8467250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 249 - 299
Target Start/End: Complemental strand, 14793523 - 14793472
Alignment:
Q  249 attataattaagggttaatggtgcttta-ctcctgtaatataggtcattttt 299  Q
    ||||||||| |||||||||||||||||| | |||||||||||||||||||||    
T  14793523 attataatttagggttaatggtgctttaccccctgtaatataggtcattttt 14793472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 253 - 302
Target Start/End: Original strand, 7327761 - 7327811
Alignment:
Q  253 taattaagggttaatggtgctttactcc-tgtaatataggtcattttttgt 302  Q
    |||| |||||||||||||||||||| || ||||||||||||||||||||||    
T  7327761 taataaagggttaatggtgctttaccccctgtaatataggtcattttttgt 7327811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 257 - 299
Target Start/End: Original strand, 18048814 - 18048856
Alignment:
Q  257 taagggttaatggtgctttactcctgtaatataggtcattttt 299  Q
    ||||||||||| ||||||||| |||||||||||||||||||||    
T  18048814 taagggttaatagtgctttacccctgtaatataggtcattttt 18048856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 251 - 299
Target Start/End: Complemental strand, 16361200 - 16361151
Alignment:
Q  251 tataattaagggttaatggtgcttta-ctcctgtaatataggtcattttt 299  Q
    |||||| ||||||||||||||||||| ||||||||||||||| |||||||    
T  16361200 tataataaagggttaatggtgctttacctcctgtaatataggccattttt 16361151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 261 - 302
Target Start/End: Original strand, 24413611 - 24413652
Alignment:
Q  261 ggttaatggtgctttactcctgtaatataggtcattttttgt 302  Q
    |||||||||||||||||  |||||||||||||||||||||||    
T  24413611 ggttaatggtgctttacctctgtaatataggtcattttttgt 24413652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 258 - 302
Target Start/End: Original strand, 28739406 - 28739451
Alignment:
Q  258 aagggttaatggtgctttactcc-tgtaatataggtcattttttgt 302  Q
    |||||||||||||||||||| || ||||||||||||||||||||||    
T  28739406 aagggttaatggtgctttaccccctgtaatataggtcattttttgt 28739451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 258 - 302
Target Start/End: Original strand, 32845455 - 32845500
Alignment:
Q  258 aagggttaatggtgctttactcc-tgtaatataggtcattttttgt 302  Q
    |||||||||||||||||||| || ||||||||||||||||||||||    
T  32845455 aagggttaatggtgctttaccccctgtaatataggtcattttttgt 32845500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 255 - 302
Target Start/End: Complemental strand, 16139178 - 16139130
Alignment:
Q  255 attaagggttaatggtgcttta-ctcctgtaatataggtcattttttgt 302  Q
    ||||||||||||| |||||||| | ||||||||||||||||||||||||    
T  16139178 attaagggttaatagtgctttatcccctgtaatataggtcattttttgt 16139130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 259 - 302
Target Start/End: Complemental strand, 32845720 - 32845676
Alignment:
Q  259 agggttaatggtgctttactcc-tgtaatataggtcattttttgt 302  Q
    ||||||||||||||||||| || ||||||||||||||||||||||    
T  32845720 agggttaatggtgctttaccccctgtaatataggtcattttttgt 32845676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 259 - 302
Target Start/End: Complemental strand, 36944288 - 36944244
Alignment:
Q  259 agggttaatggtgctttactcc-tgtaatataggtcattttttgt 302  Q
    ||||||||||||||||||| || ||||||||||||||||||||||    
T  36944288 agggttaatggtgctttaccccctgtaatataggtcattttttgt 36944244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 258 - 302
Target Start/End: Original strand, 493725 - 493771
Alignment:
Q  258 aagggttaatggtgctttactcc--tgtaatataggtcattttttgt 302  Q
    |||||||||||||||||||| ||  ||||||||||||||||||||||    
T  493725 aagggttaatggtgctttacccccctgtaatataggtcattttttgt 493771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 260 - 302
Target Start/End: Complemental strand, 5558509 - 5558466
Alignment:
Q  260 gggttaatggtgcttta-ctcctgtaatataggtcattttttgt 302  Q
    ||||||||||||||||| | ||||||||||||||||||||||||    
T  5558509 gggttaatggtgctttatcccctgtaatataggtcattttttgt 5558466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 259 - 302
Target Start/End: Original strand, 5856114 - 5856157
Alignment:
Q  259 agggttaatggtgctttactcctgtaatataggtcattttttgt 302  Q
    ||||||||||||| ||||| || |||||||||||||||||||||    
T  5856114 agggttaatggtgttttaccccagtaatataggtcattttttgt 5856157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 258 - 302
Target Start/End: Original strand, 13691742 - 13691788
Alignment:
Q  258 aagggttaatggtgctttactcc--tgtaatataggtcattttttgt 302  Q
    |||||||||||||||||||| ||  ||||||||||||||||||||||    
T  13691742 aagggttaatggtgctttacccccctgtaatataggtcattttttgt 13691788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 258 - 300
Target Start/End: Original strand, 32649852 - 32649895
Alignment:
Q  258 aagggttaatggtgctttact-cctgtaatataggtcatttttt 300  Q
    ||||||||||||||||||||| ||||||||||||||| ||||||    
T  32649852 aagggttaatggtgctttactccctgtaatataggtcttttttt 32649895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 257 - 302
Target Start/End: Complemental strand, 18544066 - 18544020
Alignment:
Q  257 taagggttaatggtgctttactc-ctgtaatataggtcattttttgt 302  Q
    ||||||||||||||| ||||| | |||||||||||||||||||||||    
T  18544066 taagggttaatggtgttttaccctctgtaatataggtcattttttgt 18544020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 257 - 302
Target Start/End: Original strand, 22552502 - 22552548
Alignment:
Q  257 taagggttaatggtgctttactcc-tgtaatataggtcattttttgt 302  Q
    ||||||||||||||| ||||| || ||||||||||||||||||||||    
T  22552502 taagggttaatggtgttttaccccctgtaatataggtcattttttgt 22552548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 257 - 299
Target Start/End: Complemental strand, 30728981 - 30728940
Alignment:
Q  257 taagggttaatggtgctttactcctgtaatataggtcattttt 299  Q
    ||||||||||||||||||||| ||||||||||| |||||||||    
T  30728981 taagggttaatggtgctttac-cctgtaatataagtcattttt 30728940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 259 - 300
Target Start/End: Original strand, 35916382 - 35916424
Alignment:
Q  259 agggttaatggtgctttact-cctgtaatataggtcatttttt 300  Q
    |||||||||||||||||||| ||||||||||| ||||||||||    
T  35916382 agggttaatggtgctttactccctgtaatatatgtcatttttt 35916424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 256 - 302
Target Start/End: Original strand, 2941360 - 2941408
Alignment:
Q  256 ttaagggttaatggtgcttta--ctcctgtaatataggtcattttttgt 302  Q
    |||||||||||||||||||||  | |||||||||||||| |||||||||    
T  2941360 ttaagggttaatggtgctttacccccctgtaatataggtaattttttgt 2941408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 259 - 299
Target Start/End: Complemental strand, 8214617 - 8214576
Alignment:
Q  259 agggttaatggtgctttactcc-tgtaatataggtcattttt 299  Q
    ||||||||||||||||||| || |||||||||||||||||||    
T  8214617 agggttaatggtgctttaccccctgtaatataggtcattttt 8214576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 259 - 299
Target Start/End: Original strand, 8898298 - 8898339
Alignment:
Q  259 agggttaatggtgctttactc-ctgtaatataggtcattttt 299  Q
    ||||||||||||||||||| | ||||||||||||||||||||    
T  8898298 agggttaatggtgctttaccctctgtaatataggtcattttt 8898339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 259 - 299
Target Start/End: Original strand, 24951903 - 24951944
Alignment:
Q  259 agggttaatggtgcttta-ctcctgtaatataggtcattttt 299  Q
    |||||||||||||||||| | |||||||||||||||||||||    
T  24951903 agggttaatggtgctttaacccctgtaatataggtcattttt 24951944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 259 - 299
Target Start/End: Complemental strand, 24952113 - 24952072
Alignment:
Q  259 agggttaatggtgctttactcc-tgtaatataggtcattttt 299  Q
    ||||||||||||||||||| || |||||||||||||||||||    
T  24952113 agggttaatggtgctttaccccctgtaatataggtcattttt 24952072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 261 - 302
Target Start/End: Complemental strand, 33441822 - 33441781
Alignment:
Q  261 ggttaatggtgctttactcctgtaatataggtcattttttgt 302  Q
    ||||||||||| ||||  ||||||||||||||||||||||||    
T  33441822 ggttaatggtgttttatccctgtaatataggtcattttttgt 33441781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 261 - 302
Target Start/End: Original strand, 38470731 - 38470772
Alignment:
Q  261 ggttaatggtgctttactcctgtaatataggtcattttttgt 302  Q
    ||||||||||||||||  ||||||||||||||||| ||||||    
T  38470731 ggttaatggtgctttatccctgtaatataggtcatcttttgt 38470772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 262 - 302
Target Start/End: Original strand, 40385245 - 40385286
Alignment:
Q  262 gttaatggtgctttactcc-tgtaatataggtcattttttgt 302  Q
    |||||||||||||||| || ||||||||||||||||||||||    
T  40385245 gttaatggtgctttaccccctgtaatataggtcattttttgt 40385286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 259 - 299
Target Start/End: Complemental strand, 43766539 - 43766498
Alignment:
Q  259 agggttaatggtgctttactcc-tgtaatataggtcattttt 299  Q
    ||||||||||||||||||| || |||||||||||||||||||    
T  43766539 agggttaatggtgctttaccccctgtaatataggtcattttt 43766498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 260 - 302
Target Start/End: Complemental strand, 44612547 - 44612503
Alignment:
Q  260 gggttaatggtgctttactcc--tgtaatataggtcattttttgt 302  Q
    |||||||||||||||||| ||  ||||||||||||||||||||||    
T  44612547 gggttaatggtgctttacccccctgtaatataggtcattttttgt 44612503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 258 - 302
Target Start/End: Original strand, 45632541 - 45632586
Alignment:
Q  258 aagggttaatggtgctttactcc-tgtaatataggtcattttttgt 302  Q
    |||||||||||||| ||||| || ||||||||||||||||||||||    
T  45632541 aagggttaatggtgttttaccccctgtaatataggtcattttttgt 45632586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 258 - 302
Target Start/End: Complemental strand, 45632784 - 45632739
Alignment:
Q  258 aagggttaatggtgcttta-ctcctgtaatataggtcattttttgt 302  Q
    ||||||||||||||||||| | ||| ||||||||||||||||||||    
T  45632784 aagggttaatggtgctttatcccctttaatataggtcattttttgt 45632739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 259 - 302
Target Start/End: Complemental strand, 13692033 - 13691989
Alignment:
Q  259 agggttaatggtgctttactcc-tgtaatataggtcattttttgt 302  Q
    ||||||||||||||||||| || ||||||||| ||||||||||||    
T  13692033 agggttaatggtgctttaccccctgtaatataagtcattttttgt 13691989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 260 - 299
Target Start/End: Complemental strand, 17920285 - 17920245
Alignment:
Q  260 gggttaatggtgctttactcc-tgtaatataggtcattttt 299  Q
    |||||||||||||||||| || |||||||||||||||||||    
T  17920285 gggttaatggtgctttaccccctgtaatataggtcattttt 17920245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 260 - 299
Target Start/End: Original strand, 23045167 - 23045207
Alignment:
Q  260 gggttaatggtgctttac-tcctgtaatataggtcattttt 299  Q
    |||||||||||| ||||| ||||||||||||||||||||||    
T  23045167 gggttaatggtgatttacctcctgtaatataggtcattttt 23045207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 259 - 302
Target Start/End: Original strand, 25299330 - 25299374
Alignment:
Q  259 agggttaatggtgcttta-ctcctgtaatataggtcattttttgt 302  Q
    |||||||| ||||||||| |||||||||||||| |||||||||||    
T  25299330 agggttaacggtgctttatctcctgtaatatagatcattttttgt 25299374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 260 - 299
Target Start/End: Original strand, 29640763 - 29640803
Alignment:
Q  260 gggttaatggtgctttactcc-tgtaatataggtcattttt 299  Q
    |||||||||||||||||| || |||||||||||||||||||    
T  29640763 gggttaatggtgctttaccccctgtaatataggtcattttt 29640803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 258 - 298
Target Start/End: Original strand, 36795154 - 36795194
Alignment:
Q  258 aagggttaatggtgctttactcctgtaatataggtcatttt 298  Q
    |||||||||| ||| ||||| ||||||||||||||||||||    
T  36795154 aagggttaatagtgttttacccctgtaatataggtcatttt 36795194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 259 - 302
Target Start/End: Complemental strand, 41611618 - 41611574
Alignment:
Q  259 agggttaatggtgctttactcc-tgtaatataggtcattttttgt 302  Q
    ||||||||||||| ||||| || ||||||||||||||||||||||    
T  41611618 agggttaatggtgttttaccccctgtaatataggtcattttttgt 41611574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1797 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold1797
Description:

Target: scaffold1797; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 254 - 302
Target Start/End: Original strand, 466 - 516
Alignment:
Q  254 aattaagggttaatggtgcttta--ctcctgtaatataggtcattttttgt 302  Q
    |||||||||||||||||||||||  | ||||||||||||||||||||||||    
T  466 aattaagggttaatggtgctttatccccctgtaatataggtcattttttgt 516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 36; Significance: 0.00000000003; HSPs: 20)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 260 - 299
Target Start/End: Complemental strand, 28519683 - 28519644
Alignment:
Q  260 gggttaatggtgctttactcctgtaatataggtcattttt 299  Q
    |||||||||||||||||| |||||||||||||||||||||    
T  28519683 gggttaatggtgctttacccctgtaatataggtcattttt 28519644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 259 - 302
Target Start/End: Complemental strand, 31261271 - 31261229
Alignment:
Q  259 agggttaatggtgctttactcctgtaatataggtcattttttgt 302  Q
    |||||||||||||||||| |||||||||||||||||||||||||    
T  31261271 agggttaatggtgcttta-tcctgtaatataggtcattttttgt 31261229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 260 - 298
Target Start/End: Complemental strand, 13012681 - 13012643
Alignment:
Q  260 gggttaatggtgctttactcctgtaatataggtcatttt 298  Q
    |||||||||||||||||| ||||||||||||||||||||    
T  13012681 gggttaatggtgctttacccctgtaatataggtcatttt 13012643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 256 - 302
Target Start/End: Complemental strand, 24802071 - 24802025
Alignment:
Q  256 ttaagggttaatggtgctttactcctgtaatataggtcattttttgt 302  Q
    |||||||||||| ||| ||||| ||||||||||||||||||||||||    
T  24802071 ttaagggttaatagtgttttacccctgtaatataggtcattttttgt 24802025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 251 - 302
Target Start/End: Complemental strand, 18254434 - 18254382
Alignment:
Q  251 tataattaagggttaatggtgctttactcc-tgtaatataggtcattttttgt 302  Q
    ||||| ||||||||||||||| ||||| || ||||||||||||||||||||||    
T  18254434 tataaataagggttaatggtgatttaccccctgtaatataggtcattttttgt 18254382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 259 - 302
Target Start/End: Complemental strand, 28593582 - 28593538
Alignment:
Q  259 agggttaatggtgcttta-ctcctgtaatataggtcattttttgt 302  Q
    |||||||||||||||||| | ||||||||||||||||||||||||    
T  28593582 agggttaatggtgctttaacccctgtaatataggtcattttttgt 28593538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 260 - 302
Target Start/End: Original strand, 4633954 - 4633997
Alignment:
Q  260 gggttaatggtgctttactcc-tgtaatataggtcattttttgt 302  Q
    |||||||||||||||||| || ||||||||||||||||||||||    
T  4633954 gggttaatggtgctttaccccctgtaatataggtcattttttgt 4633997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 260 - 302
Target Start/End: Original strand, 9672897 - 9672940
Alignment:
Q  260 gggttaatggtgctttactcc-tgtaatataggtcattttttgt 302  Q
    |||||||||||||||||| || ||||||||||||||||||||||    
T  9672897 gggttaatggtgctttaccccctgtaatataggtcattttttgt 9672940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 260 - 302
Target Start/End: Original strand, 10598319 - 10598362
Alignment:
Q  260 gggttaatggtgctttactcc-tgtaatataggtcattttttgt 302  Q
    |||||||||||||||||| || ||||||||||||||||||||||    
T  10598319 gggttaatggtgctttaccccctgtaatataggtcattttttgt 10598362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 260 - 302
Target Start/End: Original strand, 13012435 - 13012478
Alignment:
Q  260 gggttaatggtgctttactcc-tgtaatataggtcattttttgt 302  Q
    |||||||||||||||||| || ||||||||||||||||||||||    
T  13012435 gggttaatggtgctttaccccctgtaatataggtcattttttgt 13012478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 260 - 302
Target Start/End: Original strand, 13083845 - 13083888
Alignment:
Q  260 gggttaatggtgctttactcc-tgtaatataggtcattttttgt 302  Q
    |||||||||||||||||| || ||||||||||||||||||||||    
T  13083845 gggttaatggtgctttaccccctgtaatataggtcattttttgt 13083888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 259 - 302
Target Start/End: Complemental strand, 34889757 - 34889715
Alignment:
Q  259 agggttaatggtgctttactcctgtaatataggtcattttttgt 302  Q
    ||||||||||||||||||| |||||||||||||| |||||||||    
T  34889757 agggttaatggtgctttac-cctgtaatataggttattttttgt 34889715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 260 - 302
Target Start/End: Complemental strand, 36518916 - 36518873
Alignment:
Q  260 gggttaatggtgctttactcc-tgtaatataggtcattttttgt 302  Q
    |||||||||||||||||| || ||||||||||||||||||||||    
T  36518916 gggttaatggtgctttaccccctgtaatataggtcattttttgt 36518873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 260 - 297
Target Start/End: Complemental strand, 13924403 - 13924365
Alignment:
Q  260 gggttaatggtgctttac-tcctgtaatataggtcattt 297  Q
    |||||||||||||||||| ||||||||||||||||||||    
T  13924403 gggttaatggtgctttacctcctgtaatataggtcattt 13924365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 260 - 302
Target Start/End: Original strand, 24801778 - 24801820
Alignment:
Q  260 gggttaatggtgctttactcctgtaatataggtcattttttgt 302  Q
    |||||||||||||||||  | ||||||||||||||||||||||    
T  24801778 gggttaatggtgctttatccttgtaatataggtcattttttgt 24801820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 254 - 302
Target Start/End: Complemental strand, 5661937 - 5661888
Alignment:
Q  254 aattaagggttaatggtgctttactcc-tgtaatataggtcattttttgt 302  Q
    |||| ||||||||||||||||||| || |||||||||| |||||||||||    
T  5661937 aatttagggttaatggtgctttaccccctgtaatatagatcattttttgt 5661888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 256 - 302
Target Start/End: Original strand, 12496530 - 12496578
Alignment:
Q  256 ttaagggttaatggtgcttta--ctcctgtaatataggtcattttttgt 302  Q
    |||||||||||||||||||||  | |||||| |||||||||||||||||    
T  12496530 ttaagggttaatggtgctttacccccctgtagtataggtcattttttgt 12496578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 256 - 297
Target Start/End: Complemental strand, 1460726 - 1460683
Alignment:
Q  256 ttaagggttaatggtgcttt--actcctgtaatataggtcattt 297  Q
    |||||||||||| |||||||  ||||||||||||||||||||||    
T  1460726 ttaagggttaatagtgcttttcactcctgtaatataggtcattt 1460683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 261 - 300
Target Start/End: Original strand, 4633761 - 4633801
Alignment:
Q  261 ggttaatggtgctttactcc-tgtaatataggtcatttttt 300  Q
    ||||||||||||||||| || ||||||||||||||||||||    
T  4633761 ggttaatggtgctttaccccatgtaatataggtcatttttt 4633801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 263 - 299
Target Start/End: Original strand, 39089649 - 39089685
Alignment:
Q  263 ttaatggtgctttactcctgtaatataggtcattttt 299  Q
    ||||||||||||||| ||||||||||| |||||||||    
T  39089649 ttaatggtgctttacccctgtaatataagtcattttt 39089685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0511 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0511
Description:

Target: scaffold0511; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 257 - 299
Target Start/End: Complemental strand, 5486 - 5443
Alignment:
Q  257 taagggttaatggtgctttactcc-tgtaatataggtcattttt 299  Q
    ||||||||||||||||||||| || |||||||||||||||||||    
T  5486 taagggttaatggtgctttaccccttgtaatataggtcattttt 5443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0192 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0192
Description:

Target: scaffold0192; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 257 - 299
Target Start/End: Complemental strand, 14507 - 14464
Alignment:
Q  257 taagggttaatggtgctttactcc-tgtaatataggtcattttt 299  Q
    ||||||||||||||||||||| || |||||||||||||||||||    
T  14507 taagggttaatggtgctttaccccctgtaatataggtcattttt 14464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0085 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0085
Description:

Target: scaffold0085; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 256 - 300
Target Start/End: Original strand, 25024 - 25070
Alignment:
Q  256 ttaagggttaatggtgctttactcc--tgtaatataggtcatttttt 300  Q
    |||||||||||||||||||||| ||  ||||||||||||||||||||    
T  25024 ttaagggttaatggtgctttacccccttgtaatataggtcatttttt 25070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 258 - 302
Target Start/End: Complemental strand, 145608 - 145562
Alignment:
Q  258 aagggttaatggtgcttta--ctcctgtaatataggtcattttttgt 302  Q
    |||||||||||||||||||  | ||||||||||||||||||||||||    
T  145608 aagggttaatggtgctttatccccctgtaatataggtcattttttgt 145562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 251 - 299
Target Start/End: Original strand, 149977 - 150027
Alignment:
Q  251 tataattaagggttaatggtgcttta--ctcctgtaatataggtcattttt 299  Q
    |||||| |||||||||||||||||||  | |||||||||||||||||||||    
T  149977 tataataaagggttaatggtgctttacccccctgtaatataggtcattttt 150027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0111 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0111
Description:

Target: scaffold0111; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 257 - 302
Target Start/End: Complemental strand, 29743 - 29697
Alignment:
Q  257 taagggttaatggtgctttactcc-tgtaatataggtcattttttgt 302  Q
    ||||||||||||||| ||||| || ||||||||||||||||||||||    
T  29743 taagggttaatggtgttttaccccctgtaatataggtcattttttgt 29697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 259 - 300
Target Start/End: Complemental strand, 29935 - 29893
Alignment:
Q  259 agggttaatggtgctttactcc-tgtaatataggtcatttttt 300  Q
    ||||||||||||||||||| || ||||||||||||||||||||    
T  29935 agggttaatggtgctttaccccctgtaatataggtcatttttt 29893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0597 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0597
Description:

Target: scaffold0597; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 258 - 302
Target Start/End: Complemental strand, 6537 - 6492
Alignment:
Q  258 aagggttaatggtgctttactcc-tgtaatataggtcattttttgt 302  Q
    ||||||||||| |||||||| || ||||||||||||||||||||||    
T  6537 aagggttaatgttgctttaccccctgtaatataggtcattttttgt 6492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0148 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0148
Description:

Target: scaffold0148; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 256 - 302
Target Start/End: Complemental strand, 35043 - 34995
Alignment:
Q  256 ttaagggttaatggtgctttactcc--tgtaatataggtcattttttgt 302  Q
    ||||||||||||||| |||||| ||  ||||||||||||||||||||||    
T  35043 ttaagggttaatggtactttacccccctgtaatataggtcattttttgt 34995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0318 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0318
Description:

Target: scaffold0318; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 259 - 302
Target Start/End: Original strand, 12397 - 12441
Alignment:
Q  259 agggttaatggtgctttactcc-tgtaatataggtcattttttgt 302  Q
    |||||||||| |||||||| || ||||||||||||||||||||||    
T  12397 agggttaatgatgctttaccccctgtaatataggtcattttttgt 12441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 259 - 302
Target Start/End: Original strand, 149484 - 149528
Alignment:
Q  259 agggttaatggtgctttactcc-tgtaatataggtcattttttgt 302  Q
    ||||||||||||||||||| || || |||||||||||||||||||    
T  149484 agggttaatggtgctttaccccctgaaatataggtcattttttgt 149528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University