View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5907_high_72 (Length: 238)
Name: NF5907_high_72
Description: NF5907
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5907_high_72 |
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Alignment Details
Target: chr8 (Bit Score: 202; Significance: 1e-110; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 202; E-Value: 1e-110
Query Start/End: Original strand, 1 - 229
Target Start/End: Complemental strand, 22772736 - 22772507
Alignment:
| Q |
1 |
caagacctcatgttaaataatattgtttacatctaaaagtaattgtcttgttatccaattaaaatttatgcgaaaaacctcacattgaaaacaattaaga |
100 |
Q |
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| T |
22772736 |
caagacctcatgttaaataatattgtttacatttaaaagtaattatcttgttatccaattaaaatttatgcaaaaaacctcacattgaaaacaaataaga |
22772637 |
T |
|
| Q |
101 |
tttatggaaaacaaaccattctcattgaaaagaagaggaataaaaattccaacaaagttgag-ataaattattgtgtaactactcattattatctcattg |
199 |
Q |
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|||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |
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| T |
22772636 |
tttatggaaaacaaaccattctcattgaaaagaagagggataaaaattccaacaaagttgagaataaattattgtgtaactactcattattatctcattg |
22772537 |
T |
|
| Q |
200 |
aaaagaagaagaaactacatttttctctgc |
229 |
Q |
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|||||||||||||||||||||||||||||| |
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| T |
22772536 |
aaaagaagaagaaactacatttttctctgc |
22772507 |
T |
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