View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF5907_low_24 (Length: 359)

Name: NF5907_low_24
Description: NF5907
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF5907_low_24
NF5907_low_24
[»] chr4 (23 HSPs)
chr4 (1-350)||(2390965-2391314)
chr4 (1-350)||(2381337-2381686)
chr4 (11-350)||(2380082-2380412)
chr4 (11-234)||(2382562-2382786)
chr4 (251-308)||(2367678-2367735)
chr4 (5-60)||(2621399-2621454)
chr4 (5-42)||(2486064-2486101)
chr4 (81-118)||(2525588-2525625)
chr4 (90-122)||(2376407-2376439)
chr4 (179-279)||(2621192-2621292)
chr4 (5-37)||(12124602-12124634)
chr4 (254-297)||(1547469-1547512)
chr4 (251-294)||(2373256-2373299)
chr4 (243-318)||(2460589-2460664)
chr4 (11-126)||(2467308-2467423)
chr4 (250-297)||(12126879-12126926)
chr4 (5-59)||(2534070-2534124)
chr4 (5-42)||(2361217-2361254)
chr4 (5-50)||(2547301-2547346)
chr4 (254-299)||(6007668-6007713)
chr4 (5-60)||(2393829-2393885)
chr4 (83-127)||(2477421-2477465)
chr4 (5-37)||(12126658-12126690)
[»] chr1 (3 HSPs)
chr1 (194-318)||(15837955-15838079)
chr1 (268-315)||(9581951-9581998)
chr1 (269-315)||(9587510-9587556)
[»] chr3 (1 HSPs)
chr3 (254-298)||(513446-513490)
[»] chr8 (2 HSPs)
chr8 (254-299)||(32152209-32152254)
chr8 (253-318)||(39516859-39516924)
[»] chr6 (1 HSPs)
chr6 (254-309)||(10578802-10578857)
[»] chr5 (2 HSPs)
chr5 (254-300)||(32268773-32268819)
chr5 (254-299)||(41900267-41900312)


Alignment Details
Target: chr4 (Bit Score: 318; Significance: 1e-179; HSPs: 23)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 318; E-Value: 1e-179
Query Start/End: Original strand, 1 - 350
Target Start/End: Complemental strand, 2391314 - 2390965
Alignment:
Q  1 agtaagagaggtcaaatttttcatctttttggacaaagctcggaacccatctttaggaattttgtagaagttggaaagaatgagcgatctgaggtctaaa 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||    
T  2391314 agtaagagaggtcaaatttttcatctttttggacaaagctcggaacccatctttagggattttgtagaagttggaaagaatgagcgatctgaggactaaa 2391215  T
Q  101 gggaaagtggagatttgggtaagaagcgtgttggggtgattgtgttgagagaagtaattgaggttggtggatgtgagattgagggatgtgacattagaga 200  Q
    |||||||||||||||||||||||||||||||||||| |||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2391214 gggaaagtggagatttgggtaagaagcgtgttggggcgattgcattgagagaagtaattgaggttggtggatgtgagattgagggatgtgacattagaga 2391115  T
Q  201 accgttggaagatttgaggaatgaaagggatggtttgttgggtgattttgatggagaatcggagattgttggtgatggagagtaattgtttggagacgat 300  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  2391114 accgttggaagatttgaggaatgaaagggatggtttgttgggtgattttgatggagaatcggagattgttggtgatggagagtaattgtttcgagacgat 2391015  T
Q  301 agaaagagacttgaaagtatagtgatctccatcaaggaatttgatgatgt 350  Q
    |||||||||||||||||||||||| ||| |||||||||||||||||||||    
T  2391014 agaaagagacttgaaagtatagtggtcttcatcaaggaatttgatgatgt 2390965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 234; E-Value: 1e-129
Query Start/End: Original strand, 1 - 350
Target Start/End: Complemental strand, 2381686 - 2381337
Alignment:
Q  1 agtaagagaggtcaaatttttcatctttttggacaaagctcggaacccatctttaggaattttgtagaagttggaaagaatgagcgatctgaggtctaaa 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||  | || ||||| | |||||||||| |||||||||||    
T  2381686 agtaagagaggtcaaatttttcatctttttggacaaagctcggaacccatctttagggattttaaaaaacttggagaaaatgagcgatttgaggtctaaa 2381587  T
Q  101 gggaaagtggagatttgggtaagaagcgtgttggggtgattgtgttgagagaagtaattgaggttggtggatgtgagattgagggatgtgacattagaga 200  Q
    ||||||| ||||||||||||||||||| ||||||||||||||||| |||| |||||| |||||||| |||||| ||||||||||||||||||| ||||||    
T  2381586 gggaaagcggagatttgggtaagaagcatgttggggtgattgtgtagagaaaagtaagtgaggttgctggatgcgagattgagggatgtgacactagaga 2381487  T
Q  201 accgttggaagatttgaggaatgaaagggatggtttgttgggtgattttgatggagaatcggagattgttggtgatggagagtaattgtttggagacgat 300  Q
    | |||||||||| ||||||||||||||||||||||||| |||||||||||| ||||||||||||| |||||||||| |||||||| ||||||||||||||    
T  2381486 agcgttggaagagttgaggaatgaaagggatggtttgtagggtgattttgacggagaatcggagactgttggtgatcgagagtaactgtttggagacgat 2381387  T
Q  301 agaaagagacttgaaagtatagtgatctccatcaaggaatttgatgatgt 350  Q
     |||||||||||||||||  |||| |||||||  ||||||||||||||||    
T  2381386 ggaaagagacttgaaagtgcagtggtctccattgaggaatttgatgatgt 2381337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 144; E-Value: 1e-75
Query Start/End: Original strand, 11 - 350
Target Start/End: Complemental strand, 2380412 - 2380082
Alignment:
Q  11 gtcaaatttttcatctttttggacaaagctcggaacccatctttaggaattttgtagaagttggaaagaatgagcgatctgaggtctaaagggaaagtgg 110  Q
    |||||||||||||||||||||||||||| ||| || |||| ||| || |||||| ||| |||||| |||||||||||| |||| |||||||| |||| ||    
T  2380412 gtcaaatttttcatctttttggacaaaggtcgcaatccatttttcgggattttgaagaggttggagagaatgagcgatttgagatctaaaggtaaagcgg 2380313  T
Q  111 agatttgggtaagaagcgtgttggggtgattgtgttgagagaagtaattgaggttggtggatgtgagattgagggatgtgacattagagaaccgttggaa 210  Q
    ||||||| ||||||||||||||| ||||||||| ||||| ||         ||||| ||||||||||||||||||||||||  |||    ||| ||| ||    
T  2380312 agatttgtgtaagaagcgtgttgaggtgattgtattgaggga---------ggttgatggatgtgagattgagggatgtgatgttacgacacctttgcaa 2380222  T
Q  211 gatttgaggaatgaaagggatggtttgttgggtgattttgatggagaatcggagattgttggtgatggagagtaattgtttggagacgatagaaagagac 310  Q
    ||   ||||||| |||||||||||||||||||||||||||| || |||||||| | ||| |||||| |||||||| |||||||||||||| |||||||||    
T  2380221 gaggcgaggaataaaagggatggtttgttgggtgattttgagggtgaatcggaaactgtaggtgatcgagagtaactgtttggagacgatggaaagagac 2380122  T
Q  311 ttgaaagtatagtgatctccatcaaggaatttgatgatgt 350  Q
    |||| |||| |||| |||||||||||||||||||||||||    
T  2380121 ttgacagtacagtggtctccatcaaggaatttgatgatgt 2380082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 11 - 234
Target Start/End: Complemental strand, 2382786 - 2382562
Alignment:
Q  11 gtcaaatttttcatctttttggacaaagctcggaacccatctttaggaattttgtagaagttggaaagaatgagcgatctgaggtctaaagggaaagtgg 110  Q
    ||||| |||||||||||||||||||||||||| || |||| | || | |||||| ||| |||||| |||||||| ||| |||| ||||||||  ||   |    
T  2382786 gtcaattttttcatctttttggacaaagctcgcaatccatttatatggattttgaagaggttggagagaatgagtgatttgagatctaaaggtgaaacag 2382687  T
Q  111 agatttggg-taagaagcgtgttggggtgattgtgttgagagaagtaattgaggttggtggatgtgagattgagggatgtgacattagagaaccgttgga 209  Q
    |||||| |  |||||||||||||| ||| ||||| ||||||||||| | ||||||||  |||||||| |||||||||||||||||||| || || | |||    
T  2382686 agattttgcataagaagcgtgttgaggtaattgtattgagagaagtgagtgaggttgagggatgtgatattgagggatgtgacattagggagccttcgga 2382587  T
Q  210 agatttgaggaatgaaagggatggt 234  Q
    |||   |||||||||||||||||||    
T  2382586 agaggcgaggaatgaaagggatggt 2382562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 251 - 308
Target Start/End: Complemental strand, 2367735 - 2367678
Alignment:
Q  251 atggagaatcggagattgttggtgatggagagtaattgtttggagacgatagaaagag 308  Q
    |||||||||||||||  ||||||||||||||| ||||||||||||||||| |||||||    
T  2367735 atggagaatcggagacggttggtgatggagagaaattgtttggagacgatggaaagag 2367678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 5 - 60
Target Start/End: Complemental strand, 2621454 - 2621399
Alignment:
Q  5 agagaggtcaaatttttcatctttttggacaaagctcggaacccatctttaggaat 60  Q
    ||||| |||||||||||||| |||||||| |||||||| ||||||||| |||||||    
T  2621454 agagatgtcaaatttttcatatttttggagaaagctcgcaacccatctgtaggaat 2621399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 5 - 42
Target Start/End: Original strand, 2486064 - 2486101
Alignment:
Q  5 agagaggtcaaatttttcatctttttggacaaagctcg 42  Q
    ||||| ||||||||||||||||||||||||||||||||    
T  2486064 agagatgtcaaatttttcatctttttggacaaagctcg 2486101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 81 - 118
Target Start/End: Original strand, 2525588 - 2525625
Alignment:
Q  81 tgagcgatctgaggtctaaagggaaagtggagatttgg 118  Q
    |||||||| |||||||||||||||||||||||||||||    
T  2525588 tgagcgatttgaggtctaaagggaaagtggagatttgg 2525625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 90 - 122
Target Start/End: Complemental strand, 2376439 - 2376407
Alignment:
Q  90 tgaggtctaaagggaaagtggagatttgggtaa 122  Q
    |||||||||||||||||||||||||||||||||    
T  2376439 tgaggtctaaagggaaagtggagatttgggtaa 2376407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 179 - 279
Target Start/End: Complemental strand, 2621292 - 2621192
Alignment:
Q  179 ttgagggatgtgacattagagaaccgttggaagatttgaggaatgaaagggatggtttgttgggtgattttgatggagaatcggagattgttggtgatgg 278  Q
    ||||||||||||| ||||| |||||  | |||||   |||||||||||||||||||||  | || |||| |||||||||| || |||  |||||||||||    
T  2621292 ttgagggatgtgatattagggaacctgtcgaagaggcgaggaatgaaagggatggttttatcggagattgtgatggagaaccgtagacggttggtgatgg 2621193  T
Q  279 a 279  Q
    |    
T  2621192 a 2621192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 5 - 37
Target Start/End: Original strand, 12124602 - 12124634
Alignment:
Q  5 agagaggtcaaatttttcatctttttggacaaa 37  Q
    |||||||||||||||||||||||||||||||||    
T  12124602 agagaggtcaaatttttcatctttttggacaaa 12124634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 254 - 297
Target Start/End: Complemental strand, 1547512 - 1547469
Alignment:
Q  254 gagaatcggagattgttggtgatggagagtaattgtttggagac 297  Q
    ||||||||||||  ||||||||||||||| ||||||||||||||    
T  1547512 gagaatcggagacggttggtgatggagaggaattgtttggagac 1547469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 251 - 294
Target Start/End: Complemental strand, 2373299 - 2373256
Alignment:
Q  251 atggagaatcggagattgttggtgatggagagtaattgtttgga 294  Q
    ||||||||||||||||  |||||||||||||| |||||||||||    
T  2373299 atggagaatcggagatgattggtgatggagagaaattgtttgga 2373256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 243 - 318
Target Start/End: Original strand, 2460589 - 2460664
Alignment:
Q  243 tgattttgatggagaatcggagattgttggtgatggagagtaattgtttggagacgatagaaagagacttgaaagt 318  Q
    |||||||||  ||||||||||||   |||||||||||||| || ||||||||||| || || ||||| ||||||||    
T  2460589 tgattttgagagagaatcggagacgattggtgatggagaggaactgtttggagaccatggagagagatttgaaagt 2460664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 11 - 126
Target Start/End: Original strand, 2467308 - 2467423
Alignment:
Q  11 gtcaaatttttcatctttttggacaaagctcggaacccatctttaggaattttgtagaagttggaaagaatgagcgatctgaggtctaaagggaaagtgg 110  Q
    |||||||||||||||| |||||| |||||||| |||||||||  |||||   |   |  || | | ||| |||| ||| ||||||| |||||||||||||    
T  2467308 gtcaaatttttcatctctttggagaaagctcgcaacccatctgcaggaaccgttatggggtggtagagagtgagggatttgaggtccaaagggaaagtgg 2467407  T
Q  111 agatttgggtaagaag 126  Q
    |||||| |||||||||    
T  2467408 agattttggtaagaag 2467423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 250 - 297
Target Start/End: Original strand, 12126879 - 12126926
Alignment:
Q  250 gatggagaatcggagattgttggtgatggagagtaattgtttggagac 297  Q
    |||||||||| |||||  ||||||||||||||| ||||||||||||||    
T  12126879 gatggagaataggagacggttggtgatggagagaaattgtttggagac 12126926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 5 - 59
Target Start/End: Original strand, 2534070 - 2534124
Alignment:
Q  5 agagaggtcaaatttttcatctttttggacaaagctcggaacccatctttaggaa 59  Q
    ||||| || |||||||||||||| |||||||||||||||||| ||| || |||||    
T  2534070 agagatgttaaatttttcatcttcttggacaaagctcggaactcattttcaggaa 2534124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 5 - 42
Target Start/End: Complemental strand, 2361254 - 2361217
Alignment:
Q  5 agagaggtcaaatttttcatctttttggacaaagctcg 42  Q
    ||||| |||||||||||||| |||||||||||||||||    
T  2361254 agagatgtcaaatttttcatttttttggacaaagctcg 2361217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 5 - 50
Target Start/End: Original strand, 2547301 - 2547346
Alignment:
Q  5 agagaggtcaaatttttcatctttttggacaaagctcggaacccat 50  Q
    ||||| |||||||||||||||||||  ||||||||||| |||||||    
T  2547301 agagacgtcaaatttttcatcttttcagacaaagctcgcaacccat 2547346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 254 - 299
Target Start/End: Original strand, 6007668 - 6007713
Alignment:
Q  254 gagaatcggagattgttggtgatggagagtaattgtttggagacga 299  Q
    |||||||||||| |||||||||||||||| || ||||| |||||||    
T  6007668 gagaatcggagactgttggtgatggagaggaactgtttcgagacga 6007713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 5 - 60
Target Start/End: Complemental strand, 2393885 - 2393829
Alignment:
Q  5 agagaggtcaaattttt-catctttttggacaaagctcggaacccatctttaggaat 60  Q
    ||||| ||||||||||| |||||||| |||||||||||| ||||||| |||| ||||    
T  2393885 agagatgtcaaattttttcatcttttgggacaaagctcgcaacccatttttatgaat 2393829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 83 - 127
Target Start/End: Original strand, 2477421 - 2477465
Alignment:
Q  83 agcgatctgaggtctaaagggaaagtggagatttgggtaagaagc 127  Q
    |||||||||||||||| ||  |||||||| |||||||||||||||    
T  2477421 agcgatctgaggtctatagctaaagtggatatttgggtaagaagc 2477465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 5 - 37
Target Start/End: Original strand, 12126658 - 12126690
Alignment:
Q  5 agagaggtcaaatttttcatctttttggacaaa 37  Q
    |||||||||||||||||||||| ||||||||||    
T  12126658 agagaggtcaaatttttcatctgtttggacaaa 12126690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 49; Significance: 6e-19; HSPs: 3)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 194 - 318
Target Start/End: Complemental strand, 15838079 - 15837955
Alignment:
Q  194 ttagagaaccgttggaagatttgaggaatgaaagggatggtttgttgggtgattttgatggagaatcggagattgttggtgatggagagtaattgtttgg 293  Q
    |||| ||||| ||||||||  | ||||||||||||||| ||||| |   ||||||||| |||||||||||||  ||||||||||||||| || |||||||    
T  15838079 ttagggaacctttggaagaggttaggaatgaaagggattgtttgatctatgattttgagggagaatcggagacggttggtgatggagagaaactgtttgg 15837980  T
Q  294 agacgatagaaagagacttgaaagt 318  Q
    |||| || || || |||||||||||    
T  15837979 agaccatcgagagggacttgaaagt 15837955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 268 - 315
Target Start/End: Original strand, 9581951 - 9581998
Alignment:
Q  268 gttggtgatggagagtaattgtttggagacgatagaaagagacttgaa 315  Q
    ||||||||| ||||| || ||||||||||||| |||||||||||||||    
T  9581951 gttggtgatagagagaaactgtttggagacgacagaaagagacttgaa 9581998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 269 - 315
Target Start/End: Original strand, 9587510 - 9587556
Alignment:
Q  269 ttggtgatggagagtaattgtttggagacgatagaaagagacttgaa 315  Q
    ||||||| |||||| || ||||||||||||| |||||||||||||||    
T  9587510 ttggtgacggagagaaactgtttggagacgacagaaagagacttgaa 9587556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 37; Significance: 0.000000000008; HSPs: 1)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 254 - 298
Target Start/End: Complemental strand, 513490 - 513446
Alignment:
Q  254 gagaatcggagattgttggtgatggagagtaattgtttggagacg 298  Q
    |||||||||||||||||||||||||||||||| ||||| ||||||    
T  513490 gagaatcggagattgttggtgatggagagtaactgttttgagacg 513446  T

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Target: chr8 (Bit Score: 34; Significance: 0.0000000005; HSPs: 2)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 254 - 299
Target Start/End: Original strand, 32152209 - 32152254
Alignment:
Q  254 gagaatcggagattgttggtgatggagagtaattgtttggagacga 299  Q
    |||||||||||| |||||||||||||||| || |||||||||||||    
T  32152209 gagaatcggagactgttggtgatggagaggaactgtttggagacga 32152254  T

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Target: chr8; HSP #2
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 253 - 318
Target Start/End: Original strand, 39516859 - 39516924
Alignment:
Q  253 ggagaatcggagattgttggtgatggagagtaattgtttggagacgatagaaagagacttgaaagt 318  Q
    |||||||| ||||  ||||||||||| ||| |||||| |||||||||| || ||||||||||||||    
T  39516859 ggagaatctgagacggttggtgatggcgagaaattgtctggagacgatggagagagacttgaaagt 39516924  T

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Target: chr6 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 254 - 309
Target Start/End: Complemental strand, 10578857 - 10578802
Alignment:
Q  254 gagaatcggagattgttggtgatggagagtaattgtttggagacgatagaaagaga 309  Q
    |||||| ||||| ||||||| |||||||| |||||||||||||||| ||| |||||    
T  10578857 gagaataggagactgttggttatggagaggaattgtttggagacgagagatagaga 10578802  T

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Target: chr5 (Bit Score: 31; Significance: 0.00000003; HSPs: 2)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 254 - 300
Target Start/End: Original strand, 32268773 - 32268819
Alignment:
Q  254 gagaatcggagattgttggtgatggagagtaattgtttggagacgat 300  Q
    |||||||| |||  |||||||||||||||||| ||||||||||||||    
T  32268773 gagaatcgaagacggttggtgatggagagtaactgtttggagacgat 32268819  T

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Target: chr5; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 254 - 299
Target Start/End: Complemental strand, 41900312 - 41900267
Alignment:
Q  254 gagaatcggagattgttggtgatggagagtaattgtttggagacga 299  Q
    |||||||| ||| |||||||||||||||| || |||||||||||||    
T  41900312 gagaatcgaagagtgttggtgatggagagaaactgtttggagacga 41900267  T

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