View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF5907_low_69 (Length: 245)

Name: NF5907_low_69
Description: NF5907
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF5907_low_69
NF5907_low_69
[»] chr5 (32 HSPs)
chr5 (54-245)||(34065989-34066177)
chr5 (1-62)||(2795651-2795712)
chr5 (1-55)||(4047540-4047594)
chr5 (8-57)||(3398355-3398404)
chr5 (1-54)||(8103577-8103630)
chr5 (1-54)||(11636859-11636912)
chr5 (1-60)||(30839909-30839968)
chr5 (1-44)||(41350330-41350373)
chr5 (1-55)||(36597707-36597761)
chr5 (1-45)||(30893757-30893801)
chr5 (1-60)||(34578139-34578198)
chr5 (1-51)||(31365950-31366000)
chr5 (1-54)||(6863684-6863737)
chr5 (1-50)||(14466495-14466544)
chr5 (8-51)||(12641993-12642036)
chr5 (1-44)||(15191001-15191044)
chr5 (8-51)||(32019984-32020027)
chr5 (1-51)||(23995416-23995466)
chr5 (1-59)||(35151347-35151405)
chr5 (8-56)||(14695108-14695156)
chr5 (1-33)||(30328345-30328377)
chr5 (6-53)||(13515924-13515971)
chr5 (5-59)||(28630010-28630065)
chr5 (11-50)||(29855898-29855937)
chr5 (8-51)||(40980508-40980551)
chr5 (8-55)||(42239588-42239634)
chr5 (1-55)||(16174618-16174672)
chr5 (1-51)||(35469682-35469732)
chr5 (15-52)||(29766309-29766346)
chr5 (1-29)||(9184335-9184363)
chr5 (17-57)||(40454056-40454096)
chr5 (1-45)||(40513079-40513123)
[»] chr3 (44 HSPs)
chr3 (1-65)||(38389575-38389639)
chr3 (1-62)||(11611104-11611165)
chr3 (1-53)||(3863457-3863509)
chr3 (1-64)||(16875012-16875075)
chr3 (1-55)||(23523074-23523128)
chr3 (1-58)||(2571396-2571453)
chr3 (1-61)||(10307894-10307954)
chr3 (1-53)||(29686448-29686500)
chr3 (8-55)||(50204538-50204585)
chr3 (1-51)||(20938185-20938235)
chr3 (1-50)||(40497175-40497224)
chr3 (1-45)||(11611042-11611086)
chr3 (10-61)||(33474463-33474514)
chr3 (8-51)||(40930186-40930229)
chr3 (11-54)||(51618185-51618228)
chr3 (8-50)||(8165781-8165823)
chr3 (1-51)||(13495422-13495472)
chr3 (1-50)||(41151761-41151810)
chr3 (115-170)||(3562324-3562379)
chr3 (1-52)||(36426408-36426459)
chr3 (8-55)||(45983641-45983688)
chr3 (1-52)||(49396508-49396559)
chr3 (1-55)||(12515470-12515524)
chr3 (1-51)||(35414809-35414859)
chr3 (8-50)||(42180187-42180229)
chr3 (1-51)||(46492343-46492393)
chr3 (8-54)||(51401575-51401621)
chr3 (8-45)||(23803052-23803089)
chr3 (1-54)||(25633126-25633179)
chr3 (9-50)||(31318777-31318818)
chr3 (8-53)||(32553501-32553546)
chr3 (1-34)||(36812386-36812419)
chr3 (1-50)||(37055367-37055416)
chr3 (3-51)||(24978776-24978824)
chr3 (17-64)||(13495281-13495328)
chr3 (8-55)||(54527702-54527749)
chr3 (1-51)||(15862902-15862952)
chr3 (12-50)||(46845144-46845182)
chr3 (10-51)||(15269160-15269201)
chr3 (1-50)||(27549672-27549721)
chr3 (17-50)||(51567821-51567854)
chr3 (8-44)||(23638056-23638092)
chr3 (8-40)||(38277468-38277500)
chr3 (21-53)||(38757852-38757884)
[»] chr2 (47 HSPs)
chr2 (1-56)||(16126554-16126609)
chr2 (1-56)||(12016794-12016849)
chr2 (1-55)||(27665040-27665094)
chr2 (12-62)||(43388470-43388520)
chr2 (1-54)||(19228553-19228605)
chr2 (7-54)||(6109523-6109570)
chr2 (8-55)||(8065258-8065305)
chr2 (1-44)||(8770893-8770936)
chr2 (1-56)||(24729572-24729627)
chr2 (1-55)||(4821404-4821458)
chr2 (1-55)||(38248416-38248470)
chr2 (2-55)||(9450386-9450439)
chr2 (1-53)||(9747445-9747497)
chr2 (8-56)||(26003342-26003389)
chr2 (1-56)||(5583553-5583608)
chr2 (1-56)||(16123406-16123461)
chr2 (5-56)||(20566012-20566063)
chr2 (1-55)||(14377552-14377606)
chr2 (1-51)||(15231959-15232009)
chr2 (1-55)||(29157825-29157879)
chr2 (10-51)||(5853463-5853504)
chr2 (1-54)||(7757783-7757836)
chr2 (1-54)||(15411619-15411672)
chr2 (10-51)||(16493532-16493573)
chr2 (1-45)||(16919160-16919204)
chr2 (1-57)||(23932693-23932749)
chr2 (12-51)||(11660894-11660933)
chr2 (1-36)||(13351226-13351261)
chr2 (1-40)||(22705582-22705621)
chr2 (8-59)||(36731315-36731366)
chr2 (4-54)||(35729248-35729298)
chr2 (8-62)||(43806495-43806549)
chr2 (1-51)||(45062326-45062376)
chr2 (1-54)||(17265532-17265585)
chr2 (10-51)||(22704674-22704715)
chr2 (9-54)||(29142210-29142255)
chr2 (1-50)||(34213950-34213999)
chr2 (9-54)||(34817881-34817926)
chr2 (1-45)||(2060048-2060092)
chr2 (8-55)||(4576322-4576369)
chr2 (8-50)||(6765135-6765177)
chr2 (9-51)||(7720251-7720293)
chr2 (12-54)||(25295850-25295892)
chr2 (11-56)||(15749196-15749240)
chr2 (1-34)||(37471757-37471790)
chr2 (5-45)||(41492139-41492179)
chr2 (17-65)||(43941997-43942045)
[»] chr8 (54 HSPs)
chr8 (1-55)||(10129231-10129285)
chr8 (1-60)||(7140450-7140509)
chr8 (1-55)||(9801796-9801850)
chr8 (1-55)||(26682196-26682250)
chr8 (1-63)||(39701791-39701853)
chr8 (1-54)||(1203729-1203782)
chr8 (1-62)||(2161515-2161576)
chr8 (1-54)||(18567413-18567466)
chr8 (8-57)||(27874675-27874724)
chr8 (8-57)||(28014852-28014901)
chr8 (1-53)||(39024855-39024907)
chr8 (1-56)||(13327936-13327991)
chr8 (1-55)||(3306051-3306105)
chr8 (1-55)||(6818145-6818199)
chr8 (1-55)||(14961659-14961713)
chr8 (1-54)||(35678272-35678325)
chr8 (3-51)||(13496709-13496757)
chr8 (1-53)||(14816124-14816176)
chr8 (1-53)||(14829564-14829616)
chr8 (8-51)||(22838360-22838403)
chr8 (1-60)||(26363981-26364040)
chr8 (8-55)||(31812248-31812295)
chr8 (8-51)||(38212944-38212987)
chr8 (1-55)||(4080390-4080444)
chr8 (1-55)||(4084539-4084593)
chr8 (1-55)||(4102846-4102900)
chr8 (8-54)||(8284565-8284611)
chr8 (1-55)||(12132111-12132165)
chr8 (8-53)||(5573421-5573466)
chr8 (8-61)||(12189578-12189631)
chr8 (8-61)||(12434006-12434059)
chr8 (1-54)||(19343833-19343886)
chr8 (10-51)||(40225987-40226028)
chr8 (8-44)||(36967077-36967113)
chr8 (8-55)||(9580105-9580152)
chr8 (8-55)||(38843839-38843886)
chr8 (8-58)||(26834696-26834746)
chr8 (1-55)||(32089462-32089516)
chr8 (8-54)||(45006104-45006150)
chr8 (1-55)||(45519559-45519612)
chr8 (15-56)||(43717547-43717588)
chr8 (1-53)||(15198898-15198950)
chr8 (1-53)||(31451452-31451504)
chr8 (1-45)||(44091446-44091490)
chr8 (8-55)||(14391573-14391620)
chr8 (8-51)||(16445736-16445779)
chr8 (8-51)||(31263034-31263077)
chr8 (5-53)||(34405060-34405112)
chr8 (8-54)||(7978013-7978059)
chr8 (1-55)||(45518080-45518134)
chr8 (1-58)||(10543622-10543679)
chr8 (8-53)||(12958635-12958680)
chr8 (8-36)||(297230-297258)
chr8 (1-37)||(40210835-40210871)
[»] chr4 (48 HSPs)
chr4 (1-59)||(54495629-54495687)
chr4 (1-53)||(35999945-35999997)
chr4 (1-59)||(23051374-23051432)
chr4 (1-54)||(27362519-27362572)
chr4 (8-56)||(18882262-18882310)
chr4 (1-52)||(29190815-29190866)
chr4 (1-55)||(23553698-23553752)
chr4 (1-51)||(47326892-47326942)
chr4 (1-51)||(47341688-47341738)
chr4 (1-66)||(39876958-39877023)
chr4 (1-53)||(4329722-4329774)
chr4 (1-53)||(49228782-49228834)
chr4 (8-55)||(19468329-19468376)
chr4 (1-56)||(41415552-41415607)
chr4 (1-56)||(50352430-50352485)
chr4 (8-54)||(3085805-3085851)
chr4 (1-55)||(7349816-7349870)
chr4 (8-50)||(16667385-16667427)
chr4 (8-58)||(17409959-17410009)
chr4 (8-58)||(23545611-23545661)
chr4 (1-55)||(40049686-40049740)
chr4 (8-58)||(53376401-53376451)
chr4 (1-51)||(53961450-53961500)
chr4 (10-51)||(4779436-4779477)
chr4 (1-58)||(10813487-10813544)
chr4 (8-53)||(19450898-19450943)
chr4 (8-45)||(24684972-24685009)
chr4 (9-58)||(42479885-42479934)
chr4 (1-50)||(48910803-48910852)
chr4 (1-53)||(9759140-9759192)
chr4 (1-53)||(34941406-34941458)
chr4 (1-53)||(49181200-49181252)
chr4 (8-55)||(27019395-27019442)
chr4 (1-55)||(8736807-8736861)
chr4 (8-50)||(52391433-52391475)
chr4 (1-54)||(23438283-23438336)
chr4 (1-62)||(32279199-32279260)
chr4 (8-53)||(33632201-33632246)
chr4 (12-52)||(13214415-13214455)
chr4 (1-53)||(51691469-51691521)
chr4 (1-52)||(25843422-25843473)
chr4 (8-55)||(44916639-44916686)
chr4 (8-51)||(46803934-46803977)
chr4 (1-51)||(40682560-40682609)
chr4 (4-50)||(49250336-49250382)
chr4 (12-44)||(12499371-12499403)
chr4 (22-54)||(20098619-20098651)
chr4 (8-44)||(55813999-55814035)
[»] scaffold0061 (1 HSPs)
scaffold0061 (1-53)||(52777-52829)
[»] scaffold0017 (1 HSPs)
scaffold0017 (1-53)||(145805-145857)
[»] chr7 (44 HSPs)
chr7 (1-53)||(3561876-3561928)
chr7 (1-56)||(9332089-9332144)
chr7 (1-56)||(19889468-19889523)
chr7 (1-55)||(7170130-7170184)
chr7 (1-53)||(39757108-39757160)
chr7 (8-54)||(4969908-4969954)
chr7 (5-55)||(7040248-7040298)
chr7 (1-51)||(25709399-25709449)
chr7 (1-55)||(46290138-46290192)
chr7 (8-53)||(820539-820584)
chr7 (6-55)||(32117947-32117996)
chr7 (1-53)||(5909280-5909332)
chr7 (1-53)||(23982753-23982805)
chr7 (1-53)||(33343116-33343168)
chr7 (1-53)||(34270389-34270441)
chr7 (1-53)||(47457459-47457511)
chr7 (1-52)||(8091311-8091362)
chr7 (8-63)||(12085919-12085974)
chr7 (1-44)||(36548467-36548510)
chr7 (1-51)||(384431-384480)
chr7 (1-43)||(22334029-22334071)
chr7 (8-54)||(24462952-24462998)
chr7 (1-50)||(5833483-5833532)
chr7 (8-45)||(18102236-18102273)
chr7 (1-53)||(33072109-33072161)
chr7 (1-45)||(41331462-41331506)
chr7 (2-54)||(42750412-42750464)
chr7 (8-51)||(8595032-8595075)
chr7 (8-51)||(29398134-29398177)
chr7 (8-51)||(29692540-29692583)
chr7 (8-51)||(45501594-45501637)
chr7 (1-51)||(24250626-24250676)
chr7 (8-50)||(26050462-26050504)
chr7 (8-50)||(26059821-26059863)
chr7 (8-45)||(26037228-26037265)
chr7 (12-52)||(22041725-22041765)
chr7 (8-44)||(44473519-44473555)
chr7 (1-44)||(8170649-8170692)
chr7 (8-50)||(7899487-7899529)
chr7 (1-43)||(26300699-26300741)
chr7 (11-52)||(6587924-6587965)
chr7 (8-57)||(8561589-8561637)
chr7 (7-44)||(27300563-27300600)
chr7 (8-64)||(2443893-2443947)
[»] chr1 (49 HSPs)
chr1 (1-53)||(313877-313929)
chr1 (1-53)||(6569983-6570035)
chr1 (1-57)||(39150321-39150377)
chr1 (1-56)||(30172007-30172062)
chr1 (1-56)||(30187548-30187603)
chr1 (8-61)||(6180321-6180374)
chr1 (1-53)||(6754599-6754651)
chr1 (8-56)||(35512860-35512908)
chr1 (1-52)||(30288863-30288914)
chr1 (5-55)||(6307634-6307684)
chr1 (1-55)||(17919581-17919635)
chr1 (1-55)||(23576410-23576464)
chr1 (1-55)||(44918152-44918206)
chr1 (8-58)||(51382449-51382499)
chr1 (8-57)||(22167470-22167519)
chr1 (1-54)||(25465286-25465339)
chr1 (8-53)||(34802102-34802147)
chr1 (1-54)||(41624957-41625010)
chr1 (1-53)||(1502718-1502770)
chr1 (8-60)||(5875206-5875258)
chr1 (1-53)||(36490907-36490959)
chr1 (12-64)||(38812879-38812931)
chr1 (1-52)||(10896481-10896532)
chr1 (8-54)||(39310783-39310829)
chr1 (8-56)||(3168063-3168111)
chr1 (6-58)||(4249339-4249391)
chr1 (6-58)||(4249663-4249715)
chr1 (6-58)||(4249987-4250039)
chr1 (8-52)||(13322011-13322055)
chr1 (1-56)||(19066626-19066681)
chr1 (1-56)||(19114516-19114571)
chr1 (1-40)||(39930812-39930851)
chr1 (1-39)||(8062332-8062370)
chr1 (8-50)||(35438850-35438892)
chr1 (11-52)||(5879102-5879143)
chr1 (5-57)||(3096341-3096393)
chr1 (15-51)||(23591840-23591876)
chr1 (1-53)||(30362993-30363045)
chr1 (1-56)||(1366175-1366230)
chr1 (15-50)||(41676561-41676596)
chr1 (8-51)||(51920431-51920474)
chr1 (8-50)||(9516716-9516758)
chr1 (8-50)||(13241892-13241934)
chr1 (8-50)||(32201759-32201801)
chr1 (4-34)||(44007547-44007577)
chr1 (1-34)||(24669055-24669088)
chr1 (8-51)||(7519996-7520040)
chr1 (8-40)||(28016315-28016347)
chr1 (12-44)||(32543057-32543089)
[»] chr6 (37 HSPs)
chr6 (1-59)||(17552579-17552637)
chr6 (1-53)||(3853071-3853123)
chr6 (1-57)||(10887157-10887213)
chr6 (1-52)||(29863301-29863352)
chr6 (1-52)||(31568237-31568288)
chr6 (8-58)||(34692489-34692539)
chr6 (1-54)||(28943766-28943819)
chr6 (1-53)||(14228124-14228176)
chr6 (1-53)||(17596469-17596521)
chr6 (8-55)||(13391810-13391857)
chr6 (6-53)||(18332686-18332733)
chr6 (5-52)||(32614943-32614990)
chr6 (8-53)||(2830679-2830724)
chr6 (1-50)||(6016984-6017033)
chr6 (8-45)||(20979107-20979144)
chr6 (1-50)||(31069583-31069632)
chr6 (1-53)||(31169761-31169813)
chr6 (10-61)||(8467790-8467841)
chr6 (8-51)||(24979149-24979192)
chr6 (8-51)||(27819627-27819670)
chr6 (1-52)||(29065424-29065475)
chr6 (1-52)||(29120277-29120328)
chr6 (1-40)||(31503870-31503909)
chr6 (8-54)||(3261213-3261259)
chr6 (1-54)||(33017852-33017905)
chr6 (1-41)||(1017788-1017828)
chr6 (11-51)||(30591163-30591203)
chr6 (8-51)||(4371974-4372017)
chr6 (9-44)||(23936383-23936418)
chr6 (1-52)||(28469985-28470036)
chr6 (8-51)||(29074438-29074481)
chr6 (8-51)||(29079202-29079245)
chr6 (8-51)||(29107011-29107054)
chr6 (1-50)||(8977467-8977516)
chr6 (15-56)||(22284749-22284790)
chr6 (1-58)||(34733694-34733751)
chr6 (22-54)||(28247139-28247171)
[»] scaffold0111 (1 HSPs)
scaffold0111 (6-55)||(37110-37159)
[»] scaffold0011 (1 HSPs)
scaffold0011 (1-52)||(13213-13264)
[»] scaffold0727 (1 HSPs)
scaffold0727 (1-55)||(5819-5873)
[»] scaffold0073 (1 HSPs)
scaffold0073 (5-55)||(16531-16581)
[»] scaffold0018 (1 HSPs)
scaffold0018 (2-56)||(182171-182225)
[»] scaffold0155 (1 HSPs)
scaffold0155 (3-53)||(3411-3461)
[»] scaffold0136 (1 HSPs)
scaffold0136 (8-44)||(1450-1486)
[»] scaffold0192 (1 HSPs)
scaffold0192 (1-40)||(13574-13613)
[»] scaffold0618 (1 HSPs)
scaffold0618 (1-45)||(8420-8464)
[»] scaffold0128 (1 HSPs)
scaffold0128 (8-52)||(44293-44337)
[»] scaffold0036 (1 HSPs)
scaffold0036 (11-51)||(94018-94058)
[»] scaffold0229 (1 HSPs)
scaffold0229 (1-56)||(24522-24577)
[»] scaffold0074 (1 HSPs)
scaffold0074 (1-51)||(45497-45547)
[»] scaffold0157 (1 HSPs)
scaffold0157 (12-44)||(21074-21106)
[»] scaffold0038 (1 HSPs)
scaffold0038 (22-54)||(47301-47333)
[»] scaffold0009 (1 HSPs)
scaffold0009 (8-40)||(191326-191358)


Alignment Details
Target: chr5 (Bit Score: 158; Significance: 3e-84; HSPs: 32)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 158; E-Value: 3e-84
Query Start/End: Original strand, 54 - 245
Target Start/End: Complemental strand, 34066177 - 34065989
Alignment:
Q  54 ttattaaaataaggccttacaataatttggaccgttttgcctgtttgtttaaatcaataccatgttaagaatagacttggtacgcctaattacaggttta 153  Q
    |||||||||||||||||||||||   |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||    
T  34066177 ttattaaaataaggccttacaat---ttggaccgttttgcctgtttgtttaaatcaataccatgttaagaatagacttggtatgcctaattataggttta 34066081  T
Q  154 gcaatttctaggaggttttggctatttgtccccctctttgtatatgtttcattttttaatgatattttgagatagtggccctttgctactcc 245  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||    
T  34066080 gcaatttctaggaggttttggctatttgtctccctctttgtatatgtttctttttttaatgatattttgagatagtggccctttgctgctcc 34065989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 2795651 - 2795712
Alignment:
Q  1 ttactactttaaacttcttaacatgtgcaaatttgcacatgatagtaaaacccttattaaaa 62  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||    
T  2795651 ttactactttaaacttcttaacatgtgcaaatttgcacatgatagaaaaacccatattaaaa 2795712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 4047540 - 4047594
Alignment:
Q  1 ttactactttaaacttcttaacatgtgcaaatttgcacatgatagtaaaaccctt 55  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  4047540 ttactactttaaacttcttaacatgtgcaaatttgcacatgatagaaaaaccctt 4047594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 8 - 57
Target Start/End: Original strand, 3398355 - 3398404
Alignment:
Q  8 tttaaacttcttaacatgtgcaaatttgcacatgatagtaaaacccttat 57  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||    
T  3398355 tttaaacttcttaacatgtgcaaatttgcacatgatagaaaaacccttat 3398404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 8103630 - 8103577
Alignment:
Q  1 ttactactttaaacttcttaacatgtgcaaatttgcacatgatagtaaaaccct 54  Q
    |||||||||||||||||||| |||||||||||||||||||||||| ||||||||    
T  8103630 ttactactttaaacttcttatcatgtgcaaatttgcacatgatagaaaaaccct 8103577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 11636859 - 11636912
Alignment:
Q  1 ttactactttaaacttcttaacatgtgcaaatttgcacatgatagtaaaaccct 54  Q
    |||||||||||||||||||| |||||||||||||||||||||||| ||||||||    
T  11636859 ttactactttaaacttcttatcatgtgcaaatttgcacatgatagaaaaaccct 11636912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 30839909 - 30839968
Alignment:
Q  1 ttactactttaaacttcttaacatgtgcaaatttgcacatgatagtaaaacccttattaa 60  Q
    |||||| |||||| ||||||||||||||||||||||||||||||| ||||||||| ||||    
T  30839909 ttactattttaaatttcttaacatgtgcaaatttgcacatgatagaaaaaccctttttaa 30839968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 41350330 - 41350373
Alignment:
Q  1 ttactactttaaacttcttaacatgtgcaaatttgcacatgata 44  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  41350330 ttactactttaaacttcttaacatgtgcaaatttgcacatgata 41350373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 36597707 - 36597761
Alignment:
Q  1 ttactactttaaacttcttaacatgtgcaaatttgcacatgatagtaaaaccctt 55  Q
    |||||| |||||| ||||||||||||||||||||||||||||||| |||||||||    
T  36597707 ttactattttaaatttcttaacatgtgcaaatttgcacatgatagaaaaaccctt 36597761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 30893757 - 30893801
Alignment:
Q  1 ttactactttaaacttcttaacatgtgcaaatttgcacatgatag 45  Q
    |||||| ||||||||||||||||||||||||||||||||||||||    
T  30893757 ttactattttaaacttcttaacatgtgcaaatttgcacatgatag 30893801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 34578139 - 34578198
Alignment:
Q  1 ttactactttaaacttcttaacatgtgcaaatttgcacatgatagtaaaacccttattaa 60  Q
    |||||| ||||||||| |||||||||||||||||||||||||||  |||| |||||||||    
T  34578139 ttactattttaaactttttaacatgtgcaaatttgcacatgataaaaaaatccttattaa 34578198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 31366000 - 31365950
Alignment:
Q  1 ttactactttaaacttcttaacatgtgcaaatttgcacatgatagtaaaac 51  Q
    |||||| ||||||||||||||||||| |||||||||||||||||| |||||    
T  31366000 ttactaatttaaacttcttaacatgtacaaatttgcacatgatagaaaaac 31365950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 6863684 - 6863737
Alignment:
Q  1 ttactactttaaacttcttaacatgtgcaaatttgcacatgatagtaaaaccct 54  Q
    |||||| |||||| || |||||||||||||||||||||||||||| ||||||||    
T  6863684 ttactattttaaattttttaacatgtgcaaatttgcacatgatagaaaaaccct 6863737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 14466544 - 14466495
Alignment:
Q  1 ttactactttaaacttcttaacatgtgcaaatttgcacatgatagtaaaa 50  Q
    ||||||||||||||||||||||||||  ||||||||||||||||| ||||    
T  14466544 ttactactttaaacttcttaacatgtctaaatttgcacatgatagaaaaa 14466495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 8 - 51
Target Start/End: Complemental strand, 12642036 - 12641993
Alignment:
Q  8 tttaaacttcttaacatgtgcaaatttgcacatgatagtaaaac 51  Q
    ||||||||||||||||||||||||||||||||| |||| |||||    
T  12642036 tttaaacttcttaacatgtgcaaatttgcacattatagaaaaac 12641993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 15191001 - 15191044
Alignment:
Q  1 ttactactttaaacttcttaacatgtgcaaatttgcacatgata 44  Q
    ||||||||||||||||||||||||||||||||||  ||||||||    
T  15191001 ttactactttaaacttcttaacatgtgcaaatttatacatgata 15191044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 8 - 51
Target Start/End: Complemental strand, 32020027 - 32019984
Alignment:
Q  8 tttaaacttcttaacatgtgcaaatttgcacatgatagtaaaac 51  Q
    |||||| ||||||||||||||||||||||||||||||| |||||    
T  32020027 tttaaatttcttaacatgtgcaaatttgcacatgatagaaaaac 32019984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 23995466 - 23995416
Alignment:
Q  1 ttactactttaaacttcttaacatgtgcaaatttgcacatgatagtaaaac 51  Q
    |||||| ||||||||||||||||||| ||||||||||||| |||| |||||    
T  23995466 ttactattttaaacttcttaacatgtacaaatttgcacataatagaaaaac 23995416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 35151347 - 35151405
Alignment:
Q  1 ttactactttaaacttcttaacatgtgcaaatttgcacatgatagtaaaacccttatta 59  Q
    |||||| ||||||||| ||||||| |||||||||||||||||| | |||||| ||||||    
T  35151347 ttactattttaaactttttaacatatgcaaatttgcacatgattgaaaaaccattatta 35151405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 8 - 56
Target Start/End: Complemental strand, 14695156 - 14695108
Alignment:
Q  8 tttaaacttcttaacatgtgcaaatttgcacatgatagtaaaaccctta 56  Q
    ||||||||||||||||||||| ||||| |||||||||  ||||||||||    
T  14695156 tttaaacttcttaacatgtgcgaattttcacatgatataaaaaccctta 14695108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 30328377 - 30328345
Alignment:
Q  1 ttactactttaaacttcttaacatgtgcaaatt 33  Q
    |||||||||||||||||||||||||||||||||    
T  30328377 ttactactttaaacttcttaacatgtgcaaatt 30328345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 6 - 53
Target Start/End: Complemental strand, 13515971 - 13515924
Alignment:
Q  6 actttaaacttcttaacatgtgcaaatttgcacatgatagtaaaaccc 53  Q
    |||||||| || ||||||||||||||||| |||||||||| |||||||    
T  13515971 actttaaatttgttaacatgtgcaaatttacacatgatagaaaaaccc 13515924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 5 - 59
Target Start/End: Original strand, 28630010 - 28630065
Alignment:
Q  5 tactttaaacttcttaacatgtgcaaatttgcac-atgatagtaaaacccttatta 59  Q
    |||||||||||||||| ||||||||||||||||| ||||||| |||| || |||||    
T  28630010 tactttaaacttcttatcatgtgcaaatttgcacgatgatagaaaaatccatatta 28630065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 11 - 50
Target Start/End: Complemental strand, 29855937 - 29855898
Alignment:
Q  11 aaacttcttaacatgtgcaaatttgcacatgatagtaaaa 50  Q
    |||||||||||||||||||||||| |||||||||| ||||    
T  29855937 aaacttcttaacatgtgcaaatttacacatgatagaaaaa 29855898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 8 - 51
Target Start/End: Original strand, 40980508 - 40980551
Alignment:
Q  8 tttaaacttcttaacatgtgcaaatttgcacatgatagtaaaac 51  Q
    ||||||||| |||| ||||||||||||||||||||||| |||||    
T  40980508 tttaaactttttaatatgtgcaaatttgcacatgatagaaaaac 40980551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 8 - 55
Target Start/End: Original strand, 42239588 - 42239634
Alignment:
Q  8 tttaaacttcttaacatgtgcaaatttgcacatgatagtaaaaccctt 55  Q
    ||||||||||| |||||| ||||||||||||||||||| |||||||||    
T  42239588 tttaaacttct-aacatgcgcaaatttgcacatgatagaaaaaccctt 42239634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 16174672 - 16174618
Alignment:
Q  1 ttactactttaaacttcttaacatgtgcaaatttgcacatgatagtaaaaccctt 55  Q
    ||||||||||||| ||||||  ||||||||||||||| ||||||| |||| ||||    
T  16174672 ttactactttaaatttcttatgatgtgcaaatttgcaaatgatagaaaaatcctt 16174618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 35469682 - 35469732
Alignment:
Q  1 ttactactttaaacttcttaacatgtgcaaatttgcacatgatagtaaaac 51  Q
    |||||| |||||| || ||||||||||||||||| |||||||||| |||||    
T  35469682 ttactattttaaattttttaacatgtgcaaatttacacatgatagaaaaac 35469732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 15 - 52
Target Start/End: Original strand, 29766309 - 29766346
Alignment:
Q  15 ttcttaacatgtgcaaatttgcacatgatagtaaaacc 52  Q
    ||||||||||||||||| ||||||||||||| ||||||    
T  29766309 ttcttaacatgtgcaaacttgcacatgatagaaaaacc 29766346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 29
Target Start/End: Original strand, 9184335 - 9184363
Alignment:
Q  1 ttactactttaaacttcttaacatgtgca 29  Q
    |||||||||||||||||||||||||||||    
T  9184335 ttactactttaaacttcttaacatgtgca 9184363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 17 - 57
Target Start/End: Complemental strand, 40454096 - 40454056
Alignment:
Q  17 cttaacatgtgcaaatttgcacatgatagtaaaacccttat 57  Q
    ||||||||||||||||||||||||| ||| |||| ||||||    
T  40454096 cttaacatgtgcaaatttgcacatgttagaaaaatccttat 40454056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 40513079 - 40513123
Alignment:
Q  1 ttactactttaaacttcttaacatgtgcaaatttgcacatgatag 45  Q
    |||||| |||||| || |||||||||||||||||| |||||||||    
T  40513079 ttactattttaaattttttaacatgtgcaaatttgtacatgatag 40513123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 53; Significance: 2e-21; HSPs: 44)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 38389575 - 38389639
Alignment:
Q  1 ttactactttaaacttcttaacatgtgcaaatttgcacatgatagtaaaacccttattaaaataa 65  Q
    |||| |||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||    
T  38389575 ttaccactttaaacttcttaacatgtgcaaatttgcacatgatagaaaaacccttaataaaataa 38389639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 11611104 - 11611165
Alignment:
Q  1 ttactactttaaacttcttaacatgtgcaaatttgcacatgatagtaaaacccttattaaaa 62  Q
    |||||||||||||||||||| |||||||||||||||||||||||| ||||||||| ||||||    
T  11611104 ttactactttaaacttcttatcatgtgcaaatttgcacatgatagaaaaaccctttttaaaa 11611165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 3863457 - 3863509
Alignment:
Q  1 ttactactttaaacttcttaacatgtgcaaatttgcacatgatagtaaaaccc 53  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  3863457 ttactactttaaacttcttaacatgtgcaaatttgcacatgatagaaaaaccc 3863509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 16875075 - 16875012
Alignment:
Q  1 ttactactttaaacttcttaacatgtgcaaatttgcacatgatagtaaaacccttattaaaata 64  Q
    ||||||||||||||||||||||||||||||||||||||| ||||| ||||||||| || |||||    
T  16875075 ttactactttaaacttcttaacatgtgcaaatttgcacacgatagaaaaacccttttttaaata 16875012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 23523074 - 23523128
Alignment:
Q  1 ttactactttaaacttcttaacatgtgcaaatttgcacatgatagtaaaaccctt 55  Q
    |||| |||||||||||||||||||||||||||||||||||||||| |||||||||    
T  23523074 ttaccactttaaacttcttaacatgtgcaaatttgcacatgatagaaaaaccctt 23523128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 2571396 - 2571453
Alignment:
Q  1 ttactactttaaacttcttaacatgtgcaaatttgcacatgatagtaaaacccttatt 58  Q
    |||||| |||||| ||||||||||||||||||||||||||||||| ||||||||||||    
T  2571396 ttactattttaaatttcttaacatgtgcaaatttgcacatgatagaaaaacccttatt 2571453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 10307894 - 10307954
Alignment:
Q  1 ttactactttaaacttcttaacatgtgcaaatttgcacatgatagtaaaacccttattaaa 61  Q
    |||||| |||||| ||||||||||||||||||||||||||||||| ||||||||| |||||    
T  10307894 ttactattttaaatttcttaacatgtgcaaatttgcacatgatagaaaaaccctttttaaa 10307954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 29686448 - 29686500
Alignment:
Q  1 ttactactttaaacttcttaacatgtgcaaatttgcacatgatagtaaaaccc 53  Q
    |||||||||||||||||||| |||||||||||||||||||||||| |||||||    
T  29686448 ttactactttaaacttcttatcatgtgcaaatttgcacatgatagaaaaaccc 29686500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 8 - 55
Target Start/End: Original strand, 50204538 - 50204585
Alignment:
Q  8 tttaaacttcttaacatgtgcaaatttgcacatgatagtaaaaccctt 55  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||    
T  50204538 tttaaacttcttaacatgtgcaaatttgcacatgatagaaaaaccctt 50204585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 20938185 - 20938235
Alignment:
Q  1 ttactactttaaacttcttaacatgtgcaaatttgcacatgatagtaaaac 51  Q
    |||||||||||||||||||| |||||||||||||||||||||||| |||||    
T  20938185 ttactactttaaacttcttatcatgtgcaaatttgcacatgatagaaaaac 20938235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 40497175 - 40497224
Alignment:
Q  1 ttactactttaaacttcttaacatgtgcaaatttgcacatgatagtaaaa 50  Q
    |||||||||||||||||||| |||||||||||||||||||||||| ||||    
T  40497175 ttactactttaaacttcttatcatgtgcaaatttgcacatgatagaaaaa 40497224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 11611042 - 11611086
Alignment:
Q  1 ttactactttaaacttcttaacatgtgcaaatttgcacatgatag 45  Q
    |||||||||||||||||||| ||||||||||||||||||||||||    
T  11611042 ttactactttaaacttcttatcatgtgcaaatttgcacatgatag 11611086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 10 - 61
Target Start/End: Complemental strand, 33474514 - 33474463
Alignment:
Q  10 taaacttcttaacatgtgcaaatttgcacatgatagtaaaacccttattaaa 61  Q
    |||||||||||||||||||||||||||||||||||| ||||| | |||||||    
T  33474514 taaacttcttaacatgtgcaaatttgcacatgatagaaaaactcatattaaa 33474463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 8 - 51
Target Start/End: Original strand, 40930186 - 40930229
Alignment:
Q  8 tttaaacttcttaacatgtgcaaatttgcacatgatagtaaaac 51  Q
    |||||||||||||||||||||||||||||||||||||| |||||    
T  40930186 tttaaacttcttaacatgtgcaaatttgcacatgatagaaaaac 40930229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 11 - 54
Target Start/End: Original strand, 51618185 - 51618228
Alignment:
Q  11 aaacttcttaacatgtgcaaatttgcacatgatagtaaaaccct 54  Q
    ||||||||||||||||||||||||||||||||||| ||||||||    
T  51618185 aaacttcttaacatgtgcaaatttgcacatgatagaaaaaccct 51618228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 8 - 50
Target Start/End: Original strand, 8165781 - 8165823
Alignment:
Q  8 tttaaacttcttaacatgtgcaaatttgcacatgatagtaaaa 50  Q
    |||||||||||||||||||||||||||||||||||||| ||||    
T  8165781 tttaaacttcttaacatgtgcaaatttgcacatgatagaaaaa 8165823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 13495422 - 13495472
Alignment:
Q  1 ttactactttaaacttcttaacatgtgcaaatttgcacatgatagtaaaac 51  Q
    |||||||||||||||||||| ||||||||||||| |||||||||| |||||    
T  13495422 ttactactttaaacttcttatcatgtgcaaattttcacatgatagaaaaac 13495472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 41151761 - 41151810
Alignment:
Q  1 ttactactttaaacttcttaacatgtgcaaatttgcacatgatagtaaaa 50  Q
    |||||||||||||||||||| |||||| ||||||||||||||||| ||||    
T  41151761 ttactactttaaacttcttatcatgtgtaaatttgcacatgatagaaaaa 41151810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 115 - 170
Target Start/End: Complemental strand, 3562379 - 3562324
Alignment:
Q  115 atgttaagaatagacttggtacgcctaattacaggtttagcaatttctaggaggtt 170  Q
    ||||||||||||||||||||| ||||||||  ||||||| ||| ||||||||||||    
T  3562379 atgttaagaatagacttggtatgcctaattttaggtttatcaacttctaggaggtt 3562324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 36426459 - 36426408
Alignment:
Q  1 ttactactttaaacttcttaacatgtgcaaatttgcacatgatagtaaaacc 52  Q
    |||| |||||||||||||||||||||| |||||| |||||||||| ||||||    
T  36426459 ttaccactttaaacttcttaacatgtgtaaatttacacatgatagaaaaacc 36426408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 8 - 55
Target Start/End: Original strand, 45983641 - 45983688
Alignment:
Q  8 tttaaacttcttaacatgtgcaaatttgcacatgatagtaaaaccctt 55  Q
    ||||||||||||||| |||||||||||||||||||||  |||||||||    
T  45983641 tttaaacttcttaacctgtgcaaatttgcacatgataaaaaaaccctt 45983688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 49396508 - 49396559
Alignment:
Q  1 ttactactttaaacttcttaacatgtgcaaatttgcacatgatagtaaaacc 52  Q
    ||||||||||||||||||||| |||| |||||||||||||| ||| ||||||    
T  49396508 ttactactttaaacttcttaatatgtacaaatttgcacatggtagaaaaacc 49396559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 12515524 - 12515470
Alignment:
Q  1 ttactactttaaacttcttaacatgtgcaaatttgcacatgatagtaaaaccctt 55  Q
    |||||| |||||| || ||||||||||||||||| |||||||||| |||||||||    
T  12515524 ttactattttaaattttttaacatgtgcaaatttacacatgatagaaaaaccctt 12515470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 35414859 - 35414809
Alignment:
Q  1 ttactactttaaacttcttaacatgtgcaaatttgcacatgatagtaaaac 51  Q
    |||||| ||| |||||||||||||||| ||||||||||||||||| |||||    
T  35414859 ttactattttgaacttcttaacatgtgtaaatttgcacatgatagaaaaac 35414809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 8 - 50
Target Start/End: Original strand, 42180187 - 42180229
Alignment:
Q  8 tttaaacttcttaacatgtgcaaatttgcacatgatagtaaaa 50  Q
    ||||||||||||||||||||||||||| |||||||||| ||||    
T  42180187 tttaaacttcttaacatgtgcaaatttacacatgatagaaaaa 42180229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 46492393 - 46492343
Alignment:
Q  1 ttactactttaaacttcttaacatgtgcaaatttgcacatgatagtaaaac 51  Q
    ||||||||||||| |||||||| |||| ||||||||||||||||| |||||    
T  46492393 ttactactttaaatttcttaacgtgtgaaaatttgcacatgatagaaaaac 46492343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 8 - 54
Target Start/End: Original strand, 51401575 - 51401621
Alignment:
Q  8 tttaaacttcttaacatgtgcaaatttgcacatgatagtaaaaccct 54  Q
    |||||||||||||||||||||||||||| |||| |||| ||||||||    
T  51401575 tttaaacttcttaacatgtgcaaatttgtacataatagaaaaaccct 51401621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 8 - 45
Target Start/End: Complemental strand, 23803089 - 23803052
Alignment:
Q  8 tttaaacttcttaacatgtgcaaatttgcacatgatag 45  Q
    |||||||||||||||||||||||||||||| |||||||    
T  23803089 tttaaacttcttaacatgtgcaaatttgcatatgatag 23803052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 25633126 - 25633179
Alignment:
Q  1 ttactactttaaacttcttaacatgtgcaaatttgcacatgatagtaaaaccct 54  Q
    |||||| ||| |||||||||||| || |||||||||||||||||| ||||||||    
T  25633126 ttactattttgaacttcttaacaagttcaaatttgcacatgatagaaaaaccct 25633179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 9 - 50
Target Start/End: Original strand, 31318777 - 31318818
Alignment:
Q  9 ttaaacttcttaacatgtgcaaatttgcacatgatagtaaaa 50  Q
    |||||||||||||||||||||||||| |||||||||| ||||    
T  31318777 ttaaacttcttaacatgtgcaaattttcacatgatagaaaaa 31318818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 8 - 53
Target Start/End: Original strand, 32553501 - 32553546
Alignment:
Q  8 tttaaacttcttaacatgtgcaaatttgcacatgatagtaaaaccc 53  Q
    |||||||||||||||||||| |||||| |||||||||| |||||||    
T  32553501 tttaaacttcttaacatgtgtaaatttacacatgatagaaaaaccc 32553546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 36812386 - 36812419
Alignment:
Q  1 ttactactttaaacttcttaacatgtgcaaattt 34  Q
    ||||||||||||||||||||||||||||||||||    
T  36812386 ttactactttaaacttcttaacatgtgcaaattt 36812419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 37055416 - 37055367
Alignment:
Q  1 ttactactttaaacttcttaacatgtgcaaatttgcacatgatagtaaaa 50  Q
    |||||| |||||||||||||| |||||||||||| |||||||||| ||||    
T  37055416 ttactattttaaacttcttaatatgtgcaaattttcacatgatagaaaaa 37055367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 3 - 51
Target Start/End: Original strand, 24978776 - 24978824
Alignment:
Q  3 actactttaaacttcttaacatgtgcaaatttgcacatgatagtaaaac 51  Q
    |||||||||||||| |||||||||||||| ||| ||||||||| |||||    
T  24978776 actactttaaacttgttaacatgtgcaaacttgtacatgatagaaaaac 24978824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 17 - 64
Target Start/End: Complemental strand, 13495328 - 13495281
Alignment:
Q  17 cttaacatgtgcaaatttgcacatgatagtaaaacccttattaaaata 64  Q
    ||||||||||||||||||||||||| |||  |||||||| ||||||||    
T  13495328 cttaacatgtgcaaatttgcacatgttagacaaaccctttttaaaata 13495281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 8 - 55
Target Start/End: Complemental strand, 54527749 - 54527702
Alignment:
Q  8 tttaaacttcttaacatgtgcaaatttgcacatgatagtaaaaccctt 55  Q
    |||||| |||||||||||||||||||||||||| |||| |||| ||||    
T  54527749 tttaaatttcttaacatgtgcaaatttgcacataatagaaaaatcctt 54527702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 15862952 - 15862902
Alignment:
Q  1 ttactactttaaacttcttaacatgtgcaaatttgcacatgatagtaaaac 51  Q
    |||||| |||||||| |||||||||||| ||||| |||||||||| |||||    
T  15862952 ttactattttaaactccttaacatgtgcgaatttacacatgatagaaaaac 15862902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 50
Target Start/End: Complemental strand, 46845182 - 46845144
Alignment:
Q  12 aacttcttaacatgtgcaaatttgcacatgatagtaaaa 50  Q
    ||||||||||||||| |||||||||||||||||| ||||    
T  46845182 aacttcttaacatgtacaaatttgcacatgatagaaaaa 46845144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 10 - 51
Target Start/End: Complemental strand, 15269201 - 15269160
Alignment:
Q  10 taaacttcttaacatgtgcaaatttgcacatgatagtaaaac 51  Q
    ||||||||||||||||||||||||| || ||||||| |||||    
T  15269201 taaacttcttaacatgtgcaaatttacatatgatagaaaaac 15269160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 27549672 - 27549721
Alignment:
Q  1 ttactactttaaacttcttaacatgtgcaaatttgcacatgatagtaaaa 50  Q
    |||||||| |||| || ||||||||||||||||||||||| |||| ||||    
T  27549672 ttactactctaaattttttaacatgtgcaaatttgcacataatagaaaaa 27549721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 17 - 50
Target Start/End: Complemental strand, 51567854 - 51567821
Alignment:
Q  17 cttaacatgtgcaaatttgcacatgatagtaaaa 50  Q
    ||||||||||||||||||||||||||||| ||||    
T  51567854 cttaacatgtgcaaatttgcacatgatagaaaaa 51567821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 8 - 44
Target Start/End: Complemental strand, 23638092 - 23638056
Alignment:
Q  8 tttaaacttcttaacatgtgcaaatttgcacatgata 44  Q
    |||||| |||||||||||||||||||||| |||||||    
T  23638092 tttaaatttcttaacatgtgcaaatttgctcatgata 23638056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 8 - 40
Target Start/End: Original strand, 38277468 - 38277500
Alignment:
Q  8 tttaaacttcttaacatgtgcaaatttgcacat 40  Q
    ||||||||||||||||||||||||||| |||||    
T  38277468 tttaaacttcttaacatgtgcaaatttacacat 38277500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 21 - 53
Target Start/End: Original strand, 38757852 - 38757884
Alignment:
Q  21 acatgtgcaaatttgcacatgatagtaaaaccc 53  Q
    ||||||||||||||||||||||||| |||||||    
T  38757852 acatgtgcaaatttgcacatgatagaaaaaccc 38757884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 52; Significance: 6e-21; HSPs: 47)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 16126609 - 16126554
Alignment:
Q  1 ttactactttaaacttcttaacatgtgcaaatttgcacatgatagtaaaaccctta 56  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  16126609 ttactactttaaacttcttaacatgtgcaaatttgcacatgatagaaaaaccctta 16126554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 12016794 - 12016849
Alignment:
Q  1 ttactactttaaacttcttaacatgtgcaaatttgcacatgatagtaaaaccctta 56  Q
    ||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||    
T  12016794 ttactactttaaacttcttaatatgtgcaaatttgcacatgatagaaaaaccctta 12016849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 27665094 - 27665040
Alignment:
Q  1 ttactactttaaacttcttaacatgtgcaaatttgcacatgatagtaaaaccctt 55  Q
    |||||||||||||||||||| |||||||||||||||||||||||| |||||||||    
T  27665094 ttactactttaaacttcttatcatgtgcaaatttgcacatgatagaaaaaccctt 27665040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 12 - 62
Target Start/End: Complemental strand, 43388520 - 43388470
Alignment:
Q  12 aacttcttaacatgtgcaaatttgcacatgatagtaaaacccttattaaaa 62  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  43388520 aacttcttaacatgtgcaaatttgcacatgatagaaaaacccttattaaaa 43388470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 19228553 - 19228605
Alignment:
Q  1 ttactactttaaacttcttaacatgtgcaaatttgcacatgatagtaaaaccct 54  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  19228553 ttactactttaaacttcttaacatgtgcaaatttgcacatgatag-aaaaccct 19228605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 7 - 54
Target Start/End: Original strand, 6109523 - 6109570
Alignment:
Q  7 ctttaaacttcttaacatgtgcaaatttgcacatgatagtaaaaccct 54  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||    
T  6109523 ctttaaacttcttaacatgtgcaaatttgcacatgatagaaaaaccct 6109570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 8 - 55
Target Start/End: Original strand, 8065258 - 8065305
Alignment:
Q  8 tttaaacttcttaacatgtgcaaatttgcacatgatagtaaaaccctt 55  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||    
T  8065258 tttaaacttcttaacatgtgcaaatttgcacatgatagaaaaaccctt 8065305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 8770936 - 8770893
Alignment:
Q  1 ttactactttaaacttcttaacatgtgcaaatttgcacatgata 44  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  8770936 ttactactttaaacttcttaacatgtgcaaatttgcacatgata 8770893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 24729627 - 24729572
Alignment:
Q  1 ttactactttaaacttcttaacatgtgcaaatttgcacatgatagtaaaaccctta 56  Q
    |||||| |||||| ||||||||||||||||||||||||||||||| ||||||||||    
T  24729627 ttactattttaaatttcttaacatgtgcaaatttgcacatgatagaaaaaccctta 24729572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 4821404 - 4821458
Alignment:
Q  1 ttactactttaaacttcttaacatgtgcaaatttgcacatgatagtaaaaccctt 55  Q
    |||||||||||||||||||| ||||||||||||||||||| |||| |||||||||    
T  4821404 ttactactttaaacttcttatcatgtgcaaatttgcacataatagaaaaaccctt 4821458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 38248470 - 38248416
Alignment:
Q  1 ttactactttaaacttcttaacatgtgcaaatttgcacatgatagtaaaaccctt 55  Q
    |||||| |||||| ||||||||||||||||||||||||||||||| |||||||||    
T  38248470 ttactattttaaatttcttaacatgtgcaaatttgcacatgatagaaaaaccctt 38248416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 2 - 55
Target Start/End: Original strand, 9450386 - 9450439
Alignment:
Q  2 tactactttaaacttcttaacatgtgcaaatttgcacatgatagtaaaaccctt 55  Q
    |||||||||||| ||||||||||||||| ||||||||||||||| |||||||||    
T  9450386 tactactttaaatttcttaacatgtgcagatttgcacatgatagaaaaaccctt 9450439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 9747445 - 9747497
Alignment:
Q  1 ttactactttaaacttcttaacatgtgcaaatttgcacatgatagtaaaaccc 53  Q
    |||||| |||||||||||||||||||| ||||||||||||||||| |||||||    
T  9747445 ttactattttaaacttcttaacatgtgaaaatttgcacatgatagaaaaaccc 9747497  T

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Target: chr2; HSP #14
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 8 - 56
Target Start/End: Complemental strand, 26003389 - 26003342
Alignment:
Q  8 tttaaacttcttaacatgtgcaaatttgcacatgatagtaaaaccctta 56  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||    
T  26003389 tttaaacttcttaacatgtgcaaatttgcacatgatag-aaaaccctta 26003342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 5583608 - 5583553
Alignment:
Q  1 ttactactttaaacttcttaacatgtgcaaatttgcacatgatagtaaaaccctta 56  Q
    |||||| |||||| |||||||||||||||||||||| |||||||| ||||||||||    
T  5583608 ttactattttaaatttcttaacatgtgcaaatttgcgcatgatagaaaaaccctta 5583553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 16123406 - 16123461
Alignment:
Q  1 ttactactttaaacttcttaacatgtgcaaatttgcacatgatagtaaaaccctta 56  Q
    |||||| ||||||||||||| |||||||||||||||||||||||| |||| |||||    
T  16123406 ttactaatttaaacttcttatcatgtgcaaatttgcacatgatagaaaaatcctta 16123461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 5 - 56
Target Start/End: Complemental strand, 20566063 - 20566012
Alignment:
Q  5 tactttaaacttcttaacatgtgcaaatttgcacatgatagtaaaaccctta 56  Q
    ||||||||||||||||||||||| ||||||||||||||||| ||||| ||||    
T  20566063 tactttaaacttcttaacatgtgtaaatttgcacatgatagaaaaactctta 20566012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 14377552 - 14377606
Alignment:
Q  1 ttactactttaaacttcttaacatgtgcaaatttgcacatgatagtaaaaccctt 55  Q
    |||||||||||||||||||| ||||| |||||||||||||||||| ||| |||||    
T  14377552 ttactactttaaacttcttatcatgtacaaatttgcacatgatagaaaatccctt 14377606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 15231959 - 15232009
Alignment:
Q  1 ttactactttaaacttcttaacatgtgcaaatttgcacatgatagtaaaac 51  Q
    |||| ||||||||||||||||||||||||||||||||||| |||| |||||    
T  15231959 ttaccactttaaacttcttaacatgtgcaaatttgcacataatagaaaaac 15232009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 29157879 - 29157825
Alignment:
Q  1 ttactactttaaacttcttaacatgtgcaaatttgcacatgatagtaaaaccctt 55  Q
    |||||| || ||| ||||||||||||||||||||||||||||||| |||||||||    
T  29157879 ttactatttaaaatttcttaacatgtgcaaatttgcacatgatagaaaaaccctt 29157825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 10 - 51
Target Start/End: Complemental strand, 5853504 - 5853463
Alignment:
Q  10 taaacttcttaacatgtgcaaatttgcacatgatagtaaaac 51  Q
    |||||||||||||||||||||||||||||||||||| |||||    
T  5853504 taaacttcttaacatgtgcaaatttgcacatgatagaaaaac 5853463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 7757836 - 7757783
Alignment:
Q  1 ttactactttaaacttcttaacatgtgcaaatttgcacatgatagtaaaaccct 54  Q
    |||||| |||||| ||||||||||||| ||||||||||||||||| ||||||||    
T  7757836 ttactattttaaatttcttaacatgtgtaaatttgcacatgatagaaaaaccct 7757783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 15411672 - 15411619
Alignment:
Q  1 ttactactttaaacttcttaacatgtgcaaatttgcacatgatagtaaaaccct 54  Q
    |||||| |||||||||||||||||||||||||||||||||| ||| ||| ||||    
T  15411672 ttactattttaaacttcttaacatgtgcaaatttgcacatgttagaaaacccct 15411619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 10 - 51
Target Start/End: Complemental strand, 16493573 - 16493532
Alignment:
Q  10 taaacttcttaacatgtgcaaatttgcacatgatagtaaaac 51  Q
    |||||||||||||||||||||||||||||||||||| |||||    
T  16493573 taaacttcttaacatgtgcaaatttgcacatgatagaaaaac 16493532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 16919204 - 16919160
Alignment:
Q  1 ttactactttaaacttcttaacatgtgcaaatttgcacatgatag 45  Q
    |||||||||||||||| |||| |||||||||||||||||||||||    
T  16919204 ttactactttaaacttgttaatatgtgcaaatttgcacatgatag 16919160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 23932693 - 23932749
Alignment:
Q  1 ttactactttaaacttcttaacatgtgcaaatttgcacatgatagtaaaacccttat 57  Q
    |||||| |||||||||||||| || |||||||||||||||||||| ||||| |||||    
T  23932693 ttactattttaaacttcttaatatatgcaaatttgcacatgatagaaaaactcttat 23932749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 12 - 51
Target Start/End: Complemental strand, 11660933 - 11660894
Alignment:
Q  12 aacttcttaacatgtgcaaatttgcacatgatagtaaaac 51  Q
    |||||||||||||||||||||||||||||||||| |||||    
T  11660933 aacttcttaacatgtgcaaatttgcacatgatagaaaaac 11660894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 36
Target Start/End: Complemental strand, 13351261 - 13351226
Alignment:
Q  1 ttactactttaaacttcttaacatgtgcaaatttgc 36  Q
    ||||||||||||||||||||||||||||||||||||    
T  13351261 ttactactttaaacttcttaacatgtgcaaatttgc 13351226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 22705582 - 22705621
Alignment:
Q  1 ttactactttaaacttcttaacatgtgcaaatttgcacat 40  Q
    ||||||||||||||||||||| ||||||||||||||||||    
T  22705582 ttactactttaaacttcttaaaatgtgcaaatttgcacat 22705621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 8 - 59
Target Start/End: Original strand, 36731315 - 36731366
Alignment:
Q  8 tttaaacttcttaacatgtgcaaatttgcacatgatagtaaaacccttatta 59  Q
    |||||| ||||||||||||| |||||| |||||||||| |||||||||||||    
T  36731315 tttaaatttcttaacatgtgtaaatttacacatgatagaaaaacccttatta 36731366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 4 - 54
Target Start/End: Original strand, 35729248 - 35729298
Alignment:
Q  4 ctactttaaacttcttaacatgtgcaaatttgcacatgatagtaaaaccct 54  Q
    ||||||||||||||| |||||||||||||||| ||||| ||| ||||||||    
T  35729248 ctactttaaacttctcaacatgtgcaaatttgtacatgttagaaaaaccct 35729298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 8 - 62
Target Start/End: Original strand, 43806495 - 43806549
Alignment:
Q  8 tttaaacttcttaacatgtgcaaatttgcacatgatagtaaaacccttattaaaa 62  Q
    ||||||||| ||||||||||||||||| |||| ||||| ||||||| ||||||||    
T  43806495 tttaaactttttaacatgtgcaaatttacacacgatagaaaaacccatattaaaa 43806549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 45062326 - 45062376
Alignment:
Q  1 ttactactttaaacttcttaacatgtgcaaatttgcacatgatagtaaaac 51  Q
    |||||| ||| |||||||||| ||||||||||||||||||||||| |||||    
T  45062326 ttactattttgaacttcttaatatgtgcaaatttgcacatgatagaaaaac 45062376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 17265532 - 17265585
Alignment:
Q  1 ttactactttaaacttcttaacatgtgcaaatttgcacatgatagtaaaaccct 54  Q
    |||||| |||||| ||||||||| ||||||||||| ||||||||| ||||||||    
T  17265532 ttactattttaaatttcttaacaagtgcaaatttggacatgatagaaaaaccct 17265585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 10 - 51
Target Start/End: Original strand, 22704674 - 22704715
Alignment:
Q  10 taaacttcttaacatgtgcaaatttgcacatgatagtaaaac 51  Q
    |||||||||||| ||||||||||||||||||||||| |||||    
T  22704674 taaacttcttaagatgtgcaaatttgcacatgatagaaaaac 22704715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 9 - 54
Target Start/End: Original strand, 29142210 - 29142255
Alignment:
Q  9 ttaaacttcttaacatgtgcaaatttgcacatgatagtaaaaccct 54  Q
    |||||||||| |||||||| ||||||||||||||||| ||||||||    
T  29142210 ttaaacttctaaacatgtgtaaatttgcacatgatagaaaaaccct 29142255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 34213999 - 34213950
Alignment:
Q  1 ttactactttaaacttcttaacatgtgcaaatttgcacatgatagtaaaa 50  Q
    |||||| |||||| ||||||||||||||||||||||||| ||||| ||||    
T  34213999 ttactattttaaatttcttaacatgtgcaaatttgcacacgatagaaaaa 34213950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 9 - 54
Target Start/End: Original strand, 34817881 - 34817926
Alignment:
Q  9 ttaaacttcttaacatgtgcaaatttgcacatgatagtaaaaccct 54  Q
    ||||||||||||||||||| || |||||||||||||| ||||||||    
T  34817881 ttaaacttcttaacatgtgtaagtttgcacatgatagaaaaaccct 34817926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 2060092 - 2060048
Alignment:
Q  1 ttactactttaaacttcttaacatgtgcaaatttgcacatgatag 45  Q
    ||||||||||||| ||||||||||||| |||||||||||| ||||    
T  2060092 ttactactttaaatttcttaacatgtgtaaatttgcacatcatag 2060048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 8 - 55
Target Start/End: Complemental strand, 4576369 - 4576322
Alignment:
Q  8 tttaaacttcttaacatgtgcaaatttgcacatgatagtaaaaccctt 55  Q
    |||||| |||||||||| ||| |||||||||||||||| |||||||||    
T  4576369 tttaaatttcttaacatatgcgaatttgcacatgatagaaaaaccctt 4576322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 8 - 50
Target Start/End: Original strand, 6765135 - 6765177
Alignment:
Q  8 tttaaacttcttaacatgtgcaaatttgcacatgatagtaaaa 50  Q
    ||||||||||||||||||||||||| | |||||||||| ||||    
T  6765135 tttaaacttcttaacatgtgcaaatctacacatgatagaaaaa 6765177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 9 - 51
Target Start/End: Original strand, 7720251 - 7720293
Alignment:
Q  9 ttaaacttcttaacatgtgcaaatttgcacatgatagtaaaac 51  Q
    |||||||| |||||| ||||||||||||||||||||| |||||    
T  7720251 ttaaactttttaacacgtgcaaatttgcacatgatagaaaaac 7720293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 54
Target Start/End: Complemental strand, 25295892 - 25295850
Alignment:
Q  12 aacttcttaacatgtgcaaatttgcacatgatagtaaaaccct 54  Q
    |||||| ||||||||||||||||||| ||||||| ||||||||    
T  25295892 aacttcctaacatgtgcaaatttgcaaatgatagaaaaaccct 25295850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 11 - 56
Target Start/End: Complemental strand, 15749240 - 15749196
Alignment:
Q  11 aaacttcttaacatgtgcaaatttgcacatgatagtaaaaccctta 56  Q
    |||||||||||||||||||||||||||||  |||| ||||||||||    
T  15749240 aaacttcttaacatgtgcaaatttgcacaaaatag-aaaaccctta 15749196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 37471790 - 37471757
Alignment:
Q  1 ttactactttaaacttcttaacatgtgcaaattt 34  Q
    |||||| |||||||||||||||||||||||||||    
T  37471790 ttactattttaaacttcttaacatgtgcaaattt 37471757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 45
Target Start/End: Complemental strand, 41492179 - 41492139
Alignment:
Q  5 tactttaaacttcttaacatgtgcaaatttgcacatgatag 45  Q
    |||||||||||||||| |||||||||||||  |||||||||    
T  41492179 tactttaaacttcttatcatgtgcaaatttatacatgatag 41492139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 17 - 65
Target Start/End: Original strand, 43941997 - 43942045
Alignment:
Q  17 cttaacatgtgcaaatttgcacatgatagtaaaacccttattaaaataa 65  Q
    ||||||||||||||||||||||||| ||| |||| || |||| ||||||    
T  43941997 cttaacatgtgcaaatttgcacatgttagaaaaatccatatttaaataa 43942045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 51; Significance: 2e-20; HSPs: 54)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 10129231 - 10129285
Alignment:
Q  1 ttactactttaaacttcttaacatgtgcaaatttgcacatgatagtaaaaccctt 55  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  10129231 ttactactttaaacttcttaacatgtgcaaatttgcacatgatagaaaaaccctt 10129285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 7140509 - 7140450
Alignment:
Q  1 ttactactttaaacttcttaacatgtgcaaatttgcacatgatagtaaaacccttattaa 60  Q
    ||||||||||||||||||||| ||||||||||||||||||||||| ||||||||| ||||    
T  7140509 ttactactttaaacttcttaatatgtgcaaatttgcacatgatagaaaaaccctttttaa 7140450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 9801796 - 9801850
Alignment:
Q  1 ttactactttaaacttcttaacatgtgcaaatttgcacatgatagtaaaaccctt 55  Q
    ||||||||||||||||||||||||||||||||||||||||||| | |||||||||    
T  9801796 ttactactttaaacttcttaacatgtgcaaatttgcacatgattgaaaaaccctt 9801850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 26682196 - 26682250
Alignment:
Q  1 ttactactttaaacttcttaacatgtgcaaatttgcacatgatagtaaaaccctt 55  Q
    ||||||||||||| ||||||||||||||||||||||||||||||| |||||||||    
T  26682196 ttactactttaaatttcttaacatgtgcaaatttgcacatgatagaaaaaccctt 26682250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 39701853 - 39701791
Alignment:
Q  1 ttactactttaaacttcttaacatgtgcaaatttgcacatgatagtaaaacccttattaaaat 63  Q
    |||||||||||||||| |||||||||||||||||||||||||||| |||||| ||||| ||||    
T  39701853 ttactactttaaacttgttaacatgtgcaaatttgcacatgatagaaaaacctttatttaaat 39701791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 1203729 - 1203782
Alignment:
Q  1 ttactactttaaacttcttaacatgtgcaaatttgcacatgatagtaaaaccct 54  Q
    |||||||||||||||||||| |||||||||||||||||||||||| ||||||||    
T  1203729 ttactactttaaacttcttatcatgtgcaaatttgcacatgatagaaaaaccct 1203782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 2161515 - 2161576
Alignment:
Q  1 ttactactttaaacttcttaacatgtgcaaatttgcacatgatagtaaaacccttattaaaa 62  Q
    |||||| |||||| ||||||||||||||||||||||||||||||| ||||||| ||||||||    
T  2161515 ttactattttaaatttcttaacatgtgcaaatttgcacatgatagaaaaacccatattaaaa 2161576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 18567466 - 18567413
Alignment:
Q  1 ttactactttaaacttcttaacatgtgcaaatttgcacatgatagtaaaaccct 54  Q
    |||||| |||||||||||||||||||||||||||||||||||||| ||||||||    
T  18567466 ttactaatttaaacttcttaacatgtgcaaatttgcacatgatagaaaaaccct 18567413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 8 - 57
Target Start/End: Complemental strand, 27874724 - 27874675
Alignment:
Q  8 tttaaacttcttaacatgtgcaaatttgcacatgatagtaaaacccttat 57  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||    
T  27874724 tttaaacttcttaacatgtgcaaatttgcacatgatagaaaaacccttat 27874675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 8 - 57
Target Start/End: Complemental strand, 28014901 - 28014852
Alignment:
Q  8 tttaaacttcttaacatgtgcaaatttgcacatgatagtaaaacccttat 57  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||    
T  28014901 tttaaacttcttaacatgtgcaaatttgcacatgatagaaaaacccttat 28014852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 39024907 - 39024855
Alignment:
Q  1 ttactactttaaacttcttaacatgtgcaaatttgcacatgatagtaaaaccc 53  Q
    |||||||||||||||||||| |||||||||||||||||||||||| |||||||    
T  39024907 ttactactttaaacttcttatcatgtgcaaatttgcacatgatagaaaaaccc 39024855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 13327991 - 13327936
Alignment:
Q  1 ttactactttaaacttcttaacatgtgcaaatttgcacatgatagtaaaaccctta 56  Q
    |||||| |||||||||||||||||||||||||||||||||||||| |||| |||||    
T  13327991 ttactaatttaaacttcttaacatgtgcaaatttgcacatgatagaaaaatcctta 13327936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 3306105 - 3306051
Alignment:
Q  1 ttactactttaaacttcttaacatgtgcaaatttgcacatgatagtaaaaccctt 55  Q
    |||||| |||||| ||||||||||||||||||||||||||||||| |||||||||    
T  3306105 ttactattttaaatttcttaacatgtgcaaatttgcacatgatagaaaaaccctt 3306051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 6818145 - 6818199
Alignment:
Q  1 ttactactttaaacttcttaacatgtgcaaatttgcacatgatagtaaaaccctt 55  Q
    |||||| ||||||||||||||||||| |||||||||||||||||| |||||||||    
T  6818145 ttactattttaaacttcttaacatgtacaaatttgcacatgatagaaaaaccctt 6818199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 14961713 - 14961659
Alignment:
Q  1 ttactactttaaacttcttaacatgtgcaaatttgcacatgatagtaaaaccctt 55  Q
    |||||| ||||||||||||| |||||||||||||||||||||||| |||||||||    
T  14961713 ttactattttaaacttcttagcatgtgcaaatttgcacatgatagaaaaaccctt 14961659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 35678325 - 35678272
Alignment:
Q  1 ttactactttaaacttcttaacatgtgcaaatttgcacatgatagtaaaaccct 54  Q
    |||||||||||||||||||| |||||||||||||||||||||||  ||||||||    
T  35678325 ttactactttaaacttcttatcatgtgcaaatttgcacatgataaaaaaaccct 35678272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 3 - 51
Target Start/End: Complemental strand, 13496757 - 13496709
Alignment:
Q  3 actactttaaacttcttaacatgtgcaaatttgcacatgatagtaaaac 51  Q
    |||| |||||||||||||||||||||||||||||||||||||| |||||    
T  13496757 actattttaaacttcttaacatgtgcaaatttgcacatgatagaaaaac 13496709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 14816176 - 14816124
Alignment:
Q  1 ttactactttaaacttcttaacatgtgcaaatttgcacatgatagtaaaaccc 53  Q
    ||||||||||||| |||||| |||||||||||||||||||||||| |||||||    
T  14816176 ttactactttaaatttcttatcatgtgcaaatttgcacatgatagaaaaaccc 14816124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 14829564 - 14829616
Alignment:
Q  1 ttactactttaaacttcttaacatgtgcaaatttgcacatgatagtaaaaccc 53  Q
    ||||||||||||| |||||| |||||||||||||||||||||||| |||||||    
T  14829564 ttactactttaaatttcttatcatgtgcaaatttgcacatgatagaaaaaccc 14829616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 8 - 51
Target Start/End: Original strand, 22838360 - 22838403
Alignment:
Q  8 tttaaacttcttaacatgtgcaaatttgcacatgatagtaaaac 51  Q
    |||||||||||||||||||||||||||||||||||||| |||||    
T  22838360 tttaaacttcttaacatgtgcaaatttgcacatgatagaaaaac 22838403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 26364040 - 26363981
Alignment:
Q  1 ttactactttaaacttcttaacatgtgcaaatttgcacatgatagtaaaacccttattaa 60  Q
    |||||| |||||| ||||||||||| ||||||||||||||||||| ||||||||| ||||    
T  26364040 ttactattttaaatttcttaacatgcgcaaatttgcacatgatagaaaaacccttgttaa 26363981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 8 - 55
Target Start/End: Original strand, 31812248 - 31812295
Alignment:
Q  8 tttaaacttcttaacatgtgcaaatttgcacatgatagtaaaaccctt 55  Q
    |||||||||||||| ||||||||||||||||||||||| |||||||||    
T  31812248 tttaaacttcttaatatgtgcaaatttgcacatgatagaaaaaccctt 31812295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 8 - 51
Target Start/End: Complemental strand, 38212987 - 38212944
Alignment:
Q  8 tttaaacttcttaacatgtgcaaatttgcacatgatagtaaaac 51  Q
    |||||||||||||||||||||||||||||||||||||| |||||    
T  38212987 tttaaacttcttaacatgtgcaaatttgcacatgatagaaaaac 38212944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 4080444 - 4080390
Alignment:
Q  1 ttactactttaaacttcttaacatgtgcaaatttgcacatgatagtaaaaccctt 55  Q
    ||||||||||||| |||||| |||||||||||||||||||||||| |||| ||||    
T  4080444 ttactactttaaatttcttatcatgtgcaaatttgcacatgatagaaaaatcctt 4080390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 4084593 - 4084539
Alignment:
Q  1 ttactactttaaacttcttaacatgtgcaaatttgcacatgatagtaaaaccctt 55  Q
    ||||||||||||| |||||| |||||||||||||||||||||||| |||| ||||    
T  4084593 ttactactttaaatttcttatcatgtgcaaatttgcacatgatagaaaaatcctt 4084539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 4102900 - 4102846
Alignment:
Q  1 ttactactttaaacttcttaacatgtgcaaatttgcacatgatagtaaaaccctt 55  Q
    ||||||||||||| |||||| |||||||||||||||||||||||| |||| ||||    
T  4102900 ttactactttaaatttcttatcatgtgcaaatttgcacatgatagaaaaatcctt 4102846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 8 - 54
Target Start/End: Complemental strand, 8284611 - 8284565
Alignment:
Q  8 tttaaacttcttaacatgtgcaaatttgcacatgatagtaaaaccct 54  Q
    ||||||||||||||||||| |||||||||||||||||| ||||||||    
T  8284611 tttaaacttcttaacatgtacaaatttgcacatgatagaaaaaccct 8284565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 12132111 - 12132165
Alignment:
Q  1 ttactactttaaacttcttaacatgtgcaaatttgcacatgatagtaaaaccctt 55  Q
    ||||||||||||| |||||||||||||||| |||||| ||||||| |||||||||    
T  12132111 ttactactttaaatttcttaacatgtgcaagtttgcagatgatagaaaaaccctt 12132165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 8 - 53
Target Start/End: Original strand, 5573421 - 5573466
Alignment:
Q  8 tttaaacttcttaacatgtgcaaatttgcacatgatagtaaaaccc 53  Q
    ||||||||||||||||||| |||||||||||||||||| |||||||    
T  5573421 tttaaacttcttaacatgtacaaatttgcacatgatagaaaaaccc 5573466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 8 - 61
Target Start/End: Complemental strand, 12189631 - 12189578
Alignment:
Q  8 tttaaacttcttaacatgtgcaaatttgcacatgatagtaaaacccttattaaa 61  Q
    ||||||||||||| |||||||||||||||||||||||| |||||| | ||||||    
T  12189631 tttaaacttcttatcatgtgcaaatttgcacatgatagaaaaaccttaattaaa 12189578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 8 - 61
Target Start/End: Complemental strand, 12434059 - 12434006
Alignment:
Q  8 tttaaacttcttaacatgtgcaaatttgcacatgatagtaaaacccttattaaa 61  Q
    ||||||||||||| |||||||||||||||||||||||| |||||| | ||||||    
T  12434059 tttaaacttcttatcatgtgcaaatttgcacatgatagaaaaaccttaattaaa 12434006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 19343886 - 19343833
Alignment:
Q  1 ttactactttaaacttcttaacatgtgcaaatttgcacatgatagtaaaaccct 54  Q
    |||||||||||||| | |||||||||||||||||||||||||||  ||||||||    
T  19343886 ttactactttaaacgtgttaacatgtgcaaatttgcacatgataaaaaaaccct 19343833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 10 - 51
Target Start/End: Complemental strand, 40226028 - 40225987
Alignment:
Q  10 taaacttcttaacatgtgcaaatttgcacatgatagtaaaac 51  Q
    |||||||||||||||||||||||||||||||||||| |||||    
T  40226028 taaacttcttaacatgtgcaaatttgcacatgatagaaaaac 40225987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 8 - 44
Target Start/End: Complemental strand, 36967113 - 36967077
Alignment:
Q  8 tttaaacttcttaacatgtgcaaatttgcacatgata 44  Q
    |||||||||||||||||||||||||||||||||||||    
T  36967113 tttaaacttcttaacatgtgcaaatttgcacatgata 36967077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 8 - 55
Target Start/End: Complemental strand, 9580152 - 9580105
Alignment:
Q  8 tttaaacttcttaacatgtgcaaatttgcacatgatagtaaaaccctt 55  Q
    |||||||||||||||||||| ||||||||||||||||  |||||||||    
T  9580152 tttaaacttcttaacatgtgtaaatttgcacatgataaaaaaaccctt 9580105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 8 - 55
Target Start/End: Original strand, 38843839 - 38843886
Alignment:
Q  8 tttaaacttcttaacatgtgcaaatttgcacatgatagtaaaaccctt 55  Q
    ||||||||||||| ||||||||||||| |||||||||| |||||||||    
T  38843839 tttaaacttcttagcatgtgcaaatttacacatgatagaaaaaccctt 38843886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 8 - 58
Target Start/End: Original strand, 26834696 - 26834746
Alignment:
Q  8 tttaaacttcttaacatgtgcaaatttgcacatgatagtaaaacccttatt 58  Q
    |||||| ||||||| || |||||||||||||||||||| ||||||||||||    
T  26834696 tttaaatttcttaatatatgcaaatttgcacatgatagaaaaacccttatt 26834746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 32089516 - 32089462
Alignment:
Q  1 ttactactttaaacttcttaacatgtgcaaatttgcacatgatagtaaaaccctt 55  Q
    |||||| |||||||| ||||||||||||||||||||| || |||| |||||||||    
T  32089516 ttactattttaaactgcttaacatgtgcaaatttgcatataatagaaaaaccctt 32089462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 8 - 54
Target Start/End: Original strand, 45006104 - 45006150
Alignment:
Q  8 tttaaacttcttaacatgtgcaaatttgcacatgatagtaaaaccct 54  Q
    |||||||||||||||||||||||||||||  ||||||| ||||||||    
T  45006104 tttaaacttcttaacatgtgcaaatttgcttatgatagaaaaaccct 45006150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 45519612 - 45519559
Alignment:
Q  1 ttactactttaaacttcttaacatgtgcaaatttgcacatgatagtaaaaccctt 55  Q
    |||||||||||||||||||| ||||||||||||||  |||||||| |||||||||    
T  45519612 ttactactttaaacttcttatcatgtgcaaatttgtgcatgatag-aaaaccctt 45519559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 15 - 56
Target Start/End: Complemental strand, 43717588 - 43717547
Alignment:
Q  15 ttcttaacatgtgcaaatttgcacatgatagtaaaaccctta 56  Q
    ||||||||||||| ||||||||||||||||| ||||||||||    
T  43717588 ttcttaacatgtgtaaatttgcacatgatagaaaaaccctta 43717547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 15198950 - 15198898
Alignment:
Q  1 ttactactttaaacttcttaacatgtgcaaatttgcacatgatagtaaaaccc 53  Q
    |||||| || ||| || |||||||||||||||||||||||||||| |||||||    
T  15198950 ttactatttaaaattttttaacatgtgcaaatttgcacatgatagaaaaaccc 15198898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 31451452 - 31451504
Alignment:
Q  1 ttactactttaaacttcttaacatgtgcaaatttgcacatgatagtaaaaccc 53  Q
    ||||||||||||||||||||||| ||||||||||   |||||||| |||||||    
T  31451452 ttactactttaaacttcttaacacgtgcaaatttatccatgatagaaaaaccc 31451504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 44091446 - 44091490
Alignment:
Q  1 ttactactttaaacttcttaacatgtgcaaatttgcacatgatag 45  Q
    ||||||||||||| |||||||||| ||||||||| ||||||||||    
T  44091446 ttactactttaaatttcttaacatatgcaaatttacacatgatag 44091490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 8 - 55
Target Start/End: Complemental strand, 14391620 - 14391573
Alignment:
Q  8 tttaaacttcttaacatgtgcaaatttgcacatgatagtaaaaccctt 55  Q
    |||||||||||||||||||||||||||| |||| |||| |||| ||||    
T  14391620 tttaaacttcttaacatgtgcaaatttggacatcatagaaaaatcctt 14391573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 8 - 51
Target Start/End: Complemental strand, 16445779 - 16445736
Alignment:
Q  8 tttaaacttcttaacatgtgcaaatttgcacatgatagtaaaac 51  Q
    |||||||||||||| |||||||||||||||||| |||| |||||    
T  16445779 tttaaacttcttaatatgtgcaaatttgcacataatagaaaaac 16445736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 8 - 51
Target Start/End: Original strand, 31263034 - 31263077
Alignment:
Q  8 tttaaacttcttaacatgtgcaaatttgcacatgatagtaaaac 51  Q
    |||||||| ||||||||||||||||||||| ||||||| |||||    
T  31263034 tttaaactacttaacatgtgcaaatttgcatatgatagaaaaac 31263077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 5 - 53
Target Start/End: Complemental strand, 34405112 - 34405060
Alignment:
Q  5 tactttaaacttcttaacatgtgc----aaatttgcacatgatagtaaaaccc 53  Q
    ||||||||||||||||||||||||    ||||||||||||||||| |||||||    
T  34405112 tactttaaacttcttaacatgtgcaaataaatttgcacatgatagaaaaaccc 34405060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 8 - 54
Target Start/End: Original strand, 7978013 - 7978059
Alignment:
Q  8 tttaaacttcttaacatgtgcaaatttgcacatgatagtaaaaccct 54  Q
    ||||||||| ||||||| |||||||||||| ||||||| ||||||||    
T  7978013 tttaaactttttaacatttgcaaatttgcatatgatagaaaaaccct 7978059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 45518080 - 45518134
Alignment:
Q  1 ttactactttaaacttcttaacatgtgcaaatttgcacatgatagtaaaaccctt 55  Q
    |||||| |||||||||||||  |||| |||||||||||||||||| ||| |||||    
T  45518080 ttactagtttaaacttcttattatgtacaaatttgcacatgatagaaaacccctt 45518134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 10543679 - 10543622
Alignment:
Q  1 ttactactttaaacttcttaacatgtgcaaatttgcacatgatagtaaaacccttatt 58  Q
    |||||||||||   | ||||||||||||||||||||||||| ||| |||| |||||||    
T  10543679 ttactactttagtatccttaacatgtgcaaatttgcacatgttagaaaaatccttatt 10543622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 8 - 53
Target Start/End: Original strand, 12958635 - 12958680
Alignment:
Q  8 tttaaacttcttaacatgtgcaaatttgcacatgatagtaaaaccc 53  Q
    ||||| |||||||| |||| |||||||||||||||||| |||||||    
T  12958635 tttaagcttcttaatatgtacaaatttgcacatgatagaaaaaccc 12958680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 8 - 36
Target Start/End: Original strand, 297230 - 297258
Alignment:
Q  8 tttaaacttcttaacatgtgcaaatttgc 36  Q
    |||||||||||||||||||||||||||||    
T  297230 tttaaacttcttaacatgtgcaaatttgc 297258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 40210871 - 40210835
Alignment:
Q  1 ttactactttaaacttcttaacatgtgcaaatttgca 37  Q
    |||||| ||||||| ||||||||||||||||||||||    
T  40210871 ttactaatttaaacgtcttaacatgtgcaaatttgca 40210835  T

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Target: chr4 (Bit Score: 51; Significance: 2e-20; HSPs: 48)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 54495687 - 54495629
Alignment:
Q  1 ttactactttaaacttcttaacatgtgcaaatttgcacatgatagtaaaacccttatta 59  Q
    |||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  54495687 ttaccactttaaacttcttaacatgtgcaaatttgcacatgatagaaaaacccttatta 54495629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 35999997 - 35999945
Alignment:
Q  1 ttactactttaaacttcttaacatgtgcaaatttgcacatgatagtaaaaccc 53  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  35999997 ttactactttaaacttcttaacatgtgcaaatttgcacatgatagaaaaaccc 35999945  T

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Target: chr4; HSP #3
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 23051432 - 23051374
Alignment:
Q  1 ttactactttaaacttcttaacatgtgcaaatttgcacatgatagtaaaacccttatta 59  Q
    ||||||||||||| |||||| |||||||||||||||||||||||| |||||||||||||    
T  23051432 ttactactttaaatttcttatcatgtgcaaatttgcacatgatagaaaaacccttatta 23051374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 27362519 - 27362572
Alignment:
Q  1 ttactactttaaacttcttaacatgtgcaaatttgcacatgatagtaaaaccct 54  Q
    |||| |||||||||||||||||||||||||||||||||||||||| ||||||||    
T  27362519 ttaccactttaaacttcttaacatgtgcaaatttgcacatgatagaaaaaccct 27362572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 8 - 56
Target Start/End: Complemental strand, 18882310 - 18882262
Alignment:
Q  8 tttaaacttcttaacatgtgcaaatttgcacatgatagtaaaaccctta 56  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||    
T  18882310 tttaaacttcttaacatgtgcaaatttgcacatgatagaaaaaccctta 18882262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 29190866 - 29190815
Alignment:
Q  1 ttactactttaaacttcttaacatgtgcaaatttgcacatgatagtaaaacc 52  Q
    |||||| |||||||||||||||||||||||||||||||||||||| ||||||    
T  29190866 ttactaatttaaacttcttaacatgtgcaaatttgcacatgatagaaaaacc 29190815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 23553698 - 23553752
Alignment:
Q  1 ttactactttaaacttcttaacatgtgcaaatttgcacatgatagtaaaaccctt 55  Q
    |||||||||||||||| |||||||||||||||||||||||||||| |||| ||||    
T  23553698 ttactactttaaactttttaacatgtgcaaatttgcacatgatagaaaaatcctt 23553752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 47326942 - 47326892
Alignment:
Q  1 ttactactttaaacttcttaacatgtgcaaatttgcacatgatagtaaaac 51  Q
    |||| |||||||||||||||||||||||||||||||||||||||| |||||    
T  47326942 ttaccactttaaacttcttaacatgtgcaaatttgcacatgatagaaaaac 47326892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 47341738 - 47341688
Alignment:
Q  1 ttactactttaaacttcttaacatgtgcaaatttgcacatgatagtaaaac 51  Q
    |||| |||||||||||||||||||||||||||||||||||||||| |||||    
T  47341738 ttaccactttaaacttcttaacatgtgcaaatttgcacatgatagaaaaac 47341688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 39876958 - 39877023
Alignment:
Q  1 ttactactttaaacttcttaacatgtgcaaatttgcacatgatagtaaaacccttattaaaataag 66  Q
    |||||| |||||| |||||||||||||||||||| |||||||||| ||||||||||| || |||||    
T  39876958 ttactattttaaatttcttaacatgtgcaaatttacacatgatagaaaaacccttatgaatataag 39877023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 4329722 - 4329774
Alignment:
Q  1 ttactactttaaacttcttaacatgtgcaaatttgcacatgatagtaaaaccc 53  Q
    |||||||||||||||| ||||||| |||||||||||||||||||| |||||||    
T  4329722 ttactactttaaactttttaacatatgcaaatttgcacatgatagaaaaaccc 4329774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 49228782 - 49228834
Alignment:
Q  1 ttactactttaaacttcttaacatgtgcaaatttgcacatgatagtaaaaccc 53  Q
    |||||| |||||||||||||||| ||||||||||||||||||||| |||||||    
T  49228782 ttactaatttaaacttcttaacacgtgcaaatttgcacatgatagaaaaaccc 49228834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 8 - 55
Target Start/End: Original strand, 19468329 - 19468376
Alignment:
Q  8 tttaaacttcttaacatgtgcaaatttgcacatgatagtaaaaccctt 55  Q
    ||||||||||||||||||||||||||||||||| |||| |||||||||    
T  19468329 tttaaacttcttaacatgtgcaaatttgcacataatagaaaaaccctt 19468376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 41415607 - 41415552
Alignment:
Q  1 ttactactttaaacttcttaacatgtgcaaatttgcacatgatagtaaaaccctta 56  Q
    |||||||||||||||| ||| |||||||||||||||||||||||  ||||||||||    
T  41415607 ttactactttaaacttattatcatgtgcaaatttgcacatgatataaaaaccctta 41415552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 50352430 - 50352485
Alignment:
Q  1 ttactactttaaacttcttaacatgtgcaaatttgcacatgatagtaaaaccctta 56  Q
    |||||| |||||| ||||||||||||||||||||||| ||||||| ||||||||||    
T  50352430 ttactattttaaatttcttaacatgtgcaaatttgcatatgatagaaaaaccctta 50352485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 8 - 54
Target Start/End: Original strand, 3085805 - 3085851
Alignment:
Q  8 tttaaacttcttaacatgtgcaaatttgcacatgatagtaaaaccct 54  Q
    |||||||||||||| ||||||||||||||||||||||| ||||||||    
T  3085805 tttaaacttcttaaaatgtgcaaatttgcacatgatagaaaaaccct 3085851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 7349816 - 7349870
Alignment:
Q  1 ttactactttaaacttcttaacatgtgcaaatttgcacatgatagtaaaaccctt 55  Q
    |||||||||||||||||||| ||||| ||||||| |||||||||| |||||||||    
T  7349816 ttactactttaaacttcttatcatgtacaaatttacacatgatagaaaaaccctt 7349870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 8 - 50
Target Start/End: Complemental strand, 16667427 - 16667385
Alignment:
Q  8 tttaaacttcttaacatgtgcaaatttgcacatgatagtaaaa 50  Q
    |||||||||||||||||||||||||||||||||||||| ||||    
T  16667427 tttaaacttcttaacatgtgcaaatttgcacatgatagaaaaa 16667385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 8 - 58
Target Start/End: Original strand, 17409959 - 17410009
Alignment:
Q  8 tttaaacttcttaacatgtgcaaatttgcacatgatagtaaaacccttatt 58  Q
    ||||||||||||| |||||||||||||||||||||||| ||||||| ||||    
T  17409959 tttaaacttcttatcatgtgcaaatttgcacatgatagaaaaacccatatt 17410009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 8 - 58
Target Start/End: Original strand, 23545611 - 23545661
Alignment:
Q  8 tttaaacttcttaacatgtgcaaatttgcacatgatagtaaaacccttatt 58  Q
    ||||||||| |||||||||||||||||||||||||||| ||||| ||||||    
T  23545611 tttaaacttattaacatgtgcaaatttgcacatgatagaaaaactcttatt 23545661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 40049686 - 40049740
Alignment:
Q  1 ttactactttaaacttcttaacatgtgcaaatttgcacatgatagtaaaaccctt 55  Q
    |||||| |||||| |||||||||||||||||||||||||| |||| |||||||||    
T  40049686 ttactattttaaatttcttaacatgtgcaaatttgcacataatagaaaaaccctt 40049740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 8 - 58
Target Start/End: Complemental strand, 53376451 - 53376401
Alignment:
Q  8 tttaaacttcttaacatgtgcaaatttgcacatgatagtaaaacccttatt 58  Q
    ||||||||||||||||||||||||||| |||||||||  ||||||||||||    
T  53376451 tttaaacttcttaacatgtgcaaattttcacatgataaaaaaacccttatt 53376401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 53961450 - 53961500
Alignment:
Q  1 ttactactttaaacttcttaacatgtgcaaatttgcacatgatagtaaaac 51  Q
    |||||| |||||||||||||||||||||||||||||||| ||||| |||||    
T  53961450 ttactaatttaaacttcttaacatgtgcaaatttgcacacgatagaaaaac 53961500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 10 - 51
Target Start/End: Complemental strand, 4779477 - 4779436
Alignment:
Q  10 taaacttcttaacatgtgcaaatttgcacatgatagtaaaac 51  Q
    |||||||||||||||||||||||||||||||||||| |||||    
T  4779477 taaacttcttaacatgtgcaaatttgcacatgatagaaaaac 4779436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 10813544 - 10813487
Alignment:
Q  1 ttactactttaaacttcttaacatgtgcaaatttgcacatgatagtaaaacccttatt 58  Q
    |||||||||||||||| ||| ||| ||||||| |||||||||||| ||||||||||||    
T  10813544 ttactactttaaacttattatcatatgcaaatctgcacatgatagaaaaacccttatt 10813487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 8 - 53
Target Start/End: Complemental strand, 19450943 - 19450898
Alignment:
Q  8 tttaaacttcttaacatgtgcaaatttgcacatgatagtaaaaccc 53  Q
    ||||||||||||||||||||||||||||||||| |||| |||||||    
T  19450943 tttaaacttcttaacatgtgcaaatttgcacataatagaaaaaccc 19450898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 8 - 45
Target Start/End: Original strand, 24684972 - 24685009
Alignment:
Q  8 tttaaacttcttaacatgtgcaaatttgcacatgatag 45  Q
    ||||||||||||||||||||||||||||||||||||||    
T  24684972 tttaaacttcttaacatgtgcaaatttgcacatgatag 24685009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 9 - 58
Target Start/End: Complemental strand, 42479934 - 42479885
Alignment:
Q  9 ttaaacttcttaacatgtgcaaatttgcacatgatagtaaaacccttatt 58  Q
    ||||| ||||||||||||||||||||||||||||||| ||| ||||||||    
T  42479934 ttaaatttcttaacatgtgcaaatttgcacatgatagaaaatcccttatt 42479885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 48910852 - 48910803
Alignment:
Q  1 ttactactttaaacttcttaacatgtgcaaatttgcacatgatagtaaaa 50  Q
    |||||||||||||||||||||||| |||||||||||| ||||||| ||||    
T  48910852 ttactactttaaacttcttaacatatgcaaatttgcatatgatagaaaaa 48910803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 9759192 - 9759140
Alignment:
Q  1 ttactactttaaacttcttaacatgtgcaaatttgcacatgatagtaaaaccc 53  Q
    |||||| |||||| ||||||||||||||||||||| ||||||||| |||||||    
T  9759192 ttactattttaaatttcttaacatgtgcaaatttgtacatgatagaaaaaccc 9759140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 34941406 - 34941458
Alignment:
Q  1 ttactactttaaacttcttaacatgtgcaaatttgcacatgatagtaaaaccc 53  Q
    |||||| ||||||||||||| |||||||||||| ||||||||||| |||||||    
T  34941406 ttactattttaaacttcttatcatgtgcaaattcgcacatgatagaaaaaccc 34941458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 49181200 - 49181252
Alignment:
Q  1 ttactactttaaacttcttaacatgtgcaaatttgcacatgatagtaaaaccc 53  Q
    |||||| ||| |||||||||||| ||||||||||||||||||||| |||||||    
T  49181200 ttactattttgaacttcttaacaggtgcaaatttgcacatgatagaaaaaccc 49181252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 8 - 55
Target Start/End: Original strand, 27019395 - 27019442
Alignment:
Q  8 tttaaacttcttaacatgtgcaaatttgcacatgatagtaaaaccctt 55  Q
    ||||||||| ||||||| |||||||||||||||||||| |||||||||    
T  27019395 tttaaactttttaacatatgcaaatttgcacatgatagaaaaaccctt 27019442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 8736861 - 8736807
Alignment:
Q  1 ttactactttaaacttcttaacatgtgcaaatttgcacatgatagtaaaaccctt 55  Q
    |||| |||||||| |||||||||||||||||||| |||| ||||| |||||||||    
T  8736861 ttaccactttaaatttcttaacatgtgcaaatttacacacgatagaaaaaccctt 8736807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 8 - 50
Target Start/End: Original strand, 52391433 - 52391475
Alignment:
Q  8 tttaaacttcttaacatgtgcaaatttgcacatgatagtaaaa 50  Q
    ||||||||||||||||||||||||||| |||||||||| ||||    
T  52391433 tttaaacttcttaacatgtgcaaatttacacatgatagaaaaa 52391475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 23438283 - 23438336
Alignment:
Q  1 ttactactttaaacttcttaacatgtgcaaatttgcacatgatagtaaaaccct 54  Q
    |||||| |||||| |||| ||||||||||||||||||||| |||| ||||||||    
T  23438283 ttactattttaaaattctcaacatgtgcaaatttgcacataatagaaaaaccct 23438336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 32279199 - 32279260
Alignment:
Q  1 ttactactttaaacttcttaacatgtgcaaatttgcacatgatagtaaaacccttattaaaa 62  Q
    |||||| ||||||||| ||||||||||||||||| |||||||||  ||||| ||||| ||||    
T  32279199 ttactattttaaactttttaacatgtgcaaatttacacatgataaaaaaactcttataaaaa 32279260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 8 - 53
Target Start/End: Complemental strand, 33632246 - 33632201
Alignment:
Q  8 tttaaacttcttaacatgtgcaaatttgcacatgatagtaaaaccc 53  Q
    ||||||||| |||||||||||||||| ||||||||||| |||||||    
T  33632246 tttaaactttttaacatgtgcaaattcgcacatgatagaaaaaccc 33632201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 12 - 52
Target Start/End: Complemental strand, 13214455 - 13214415
Alignment:
Q  12 aacttcttaacatgtgcaaatttgcacatgatagtaaaacc 52  Q
    ||||||||||||||||||||||||||||| |||| ||||||    
T  13214455 aacttcttaacatgtgcaaatttgcacataatagaaaaacc 13214415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 51691469 - 51691521
Alignment:
Q  1 ttactactttaaacttcttaacatgtgcaaatttgcacatgatagtaaaaccc 53  Q
    |||||| || ||| |||||||||||||||||||| |||||||||| |||||||    
T  51691469 ttactatttaaaatttcttaacatgtgcaaatttacacatgatagaaaaaccc 51691521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 25843422 - 25843473
Alignment:
Q  1 ttactactttaaacttcttaacatgtgcaaatttgcacatgatagtaaaacc 52  Q
    |||||||||||||||| ||||||| | ||||||||||| |||||| ||||||    
T  25843422 ttactactttaaactttttaacatctacaaatttgcacgtgatagaaaaacc 25843473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 8 - 55
Target Start/End: Complemental strand, 44916686 - 44916639
Alignment:
Q  8 tttaaacttcttaacatgtgcaaatttgcacatgatagtaaaaccctt 55  Q
    |||||| || |||| ||||||||||||||||||||||| |||||||||    
T  44916686 tttaaattttttaatatgtgcaaatttgcacatgatagaaaaaccctt 44916639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 8 - 51
Target Start/End: Original strand, 46803934 - 46803977
Alignment:
Q  8 tttaaacttcttaacatgtgcaaatttgcacatgatagtaaaac 51  Q
    ||||||||| |||| ||||||||||||||||||||||| |||||    
T  46803934 tttaaactttttaatatgtgcaaatttgcacatgatagaaaaac 46803977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 40682560 - 40682609
Alignment:
Q  1 ttactactttaaacttcttaacatgtgcaaatttgcacatgatagtaaaac 51  Q
    |||||| |||||| ||||||||||||||||| ||||||||||||| |||||    
T  40682560 ttactattttaaatttcttaacatgtgcaaa-ttgcacatgatagaaaaac 40682609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 50
Target Start/End: Complemental strand, 49250382 - 49250336
Alignment:
Q  4 ctactttaaacttcttaacatgtgcaaatttgcacatgatagtaaaa 50  Q
    |||||||||| |||||||||| |||||||||||||||| ||| ||||    
T  49250382 ctactttaaatttcttaacatatgcaaatttgcacatgttagaaaaa 49250336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 44
Target Start/End: Original strand, 12499371 - 12499403
Alignment:
Q  12 aacttcttaacatgtgcaaatttgcacatgata 44  Q
    ||||||||||||||||||||||| |||||||||    
T  12499371 aacttcttaacatgtgcaaatttacacatgata 12499403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 22 - 54
Target Start/End: Original strand, 20098619 - 20098651
Alignment:
Q  22 catgtgcaaatttgcacatgatagtaaaaccct 54  Q
    |||||||||||||||||||||||| ||||||||    
T  20098619 catgtgcaaatttgcacatgatagaaaaaccct 20098651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 8 - 44
Target Start/End: Original strand, 55813999 - 55814035
Alignment:
Q  8 tttaaacttcttaacatgtgcaaatttgcacatgata 44  Q
    ||||||||| |||||||||||||||||||| ||||||    
T  55813999 tttaaactttttaacatgtgcaaatttgcatatgata 55814035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0061 (Bit Score: 49; Significance: 4e-19; HSPs: 1)
Name: scaffold0061
Description:

Target: scaffold0061; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 52829 - 52777
Alignment:
Q  1 ttactactttaaacttcttaacatgtgcaaatttgcacatgatagtaaaaccc 53  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  52829 ttactactttaaacttcttaacatgtgcaaatttgcacatgatagaaaaaccc 52777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 49; Significance: 4e-19; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 145805 - 145857
Alignment:
Q  1 ttactactttaaacttcttaacatgtgcaaatttgcacatgatagtaaaaccc 53  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  145805 ttactactttaaacttcttaacatgtgcaaatttgcacatgatagaaaaaccc 145857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 49; Significance: 4e-19; HSPs: 44)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 3561928 - 3561876
Alignment:
Q  1 ttactactttaaacttcttaacatgtgcaaatttgcacatgatagtaaaaccc 53  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  3561928 ttactactttaaacttcttaacatgtgcaaatttgcacatgatagaaaaaccc 3561876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 9332089 - 9332144
Alignment:
Q  1 ttactactttaaacttcttaacatgtgcaaatttgcacatgatagtaaaaccctta 56  Q
    |||||| |||||||||||||||||||||||||||||||||||||| ||||||||||    
T  9332089 ttactaatttaaacttcttaacatgtgcaaatttgcacatgatagaaaaaccctta 9332144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 19889468 - 19889523
Alignment:
Q  1 ttactactttaaacttcttaacatgtgcaaatttgcacatgatagtaaaaccctta 56  Q
    |||||||||||||||||||| |||||||||||||||||||||||| ||||||||||    
T  19889468 ttactactttaaacttcttatcatgtgcaaatttgcacatgatagaaaaaccctta 19889523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 7170130 - 7170184
Alignment:
Q  1 ttactactttaaacttcttaacatgtgcaaatttgcacatgatagtaaaaccctt 55  Q
    |||||||||||||||||||| |||||||||||||||||||||||| |||||||||    
T  7170130 ttactactttaaacttcttatcatgtgcaaatttgcacatgatagaaaaaccctt 7170184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 39757160 - 39757108
Alignment:
Q  1 ttactactttaaacttcttaacatgtgcaaatttgcacatgatagtaaaaccc 53  Q
    |||||| |||||||||||||||||||||||||||||||||||||| |||||||    
T  39757160 ttactattttaaacttcttaacatgtgcaaatttgcacatgatagaaaaaccc 39757108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 8 - 54
Target Start/End: Original strand, 4969908 - 4969954
Alignment:
Q  8 tttaaacttcttaacatgtgcaaatttgcacatgatagtaaaaccct 54  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||    
T  4969908 tttaaacttcttaacatgtgcaaatttgcacatgatagaaaaaccct 4969954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 5 - 55
Target Start/End: Complemental strand, 7040298 - 7040248
Alignment:
Q  5 tactttaaacttcttaacatgtgcaaatttgcacatgatagtaaaaccctt 55  Q
    ||||||||||||||||||||||||||||||||||||||||  |||||||||    
T  7040298 tactttaaacttcttaacatgtgcaaatttgcacatgatataaaaaccctt 7040248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 25709449 - 25709399
Alignment:
Q  1 ttactactttaaacttcttaacatgtgcaaatttgcacatgatagtaaaac 51  Q
    |||||| |||||||||||||||||||||||||||||||||||||| |||||    
T  25709449 ttactattttaaacttcttaacatgtgcaaatttgcacatgatagaaaaac 25709399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 46290138 - 46290192
Alignment:
Q  1 ttactactttaaacttcttaacatgtgcaaatttgcacatgatagtaaaaccctt 55  Q
    |||||| |||||| ||||||||||||||||||||||||||||||| |||||||||    
T  46290138 ttactattttaaatttcttaacatgtgcaaatttgcacatgatagaaaaaccctt 46290192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 8 - 53
Target Start/End: Complemental strand, 820584 - 820539
Alignment:
Q  8 tttaaacttcttaacatgtgcaaatttgcacatgatagtaaaaccc 53  Q
    |||||||||||||||||||||||||||||||||||||| |||||||    
T  820584 tttaaacttcttaacatgtgcaaatttgcacatgatagaaaaaccc 820539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 6 - 55
Target Start/End: Original strand, 32117947 - 32117996
Alignment:
Q  6 actttaaacttcttaacatgtgcaaatttgcacatgatagtaaaaccctt 55  Q
    |||||||| ||||||||||||||||||||||||||||||| |||||||||    
T  32117947 actttaaatttcttaacatgtgcaaatttgcacatgatagaaaaaccctt 32117996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 5909332 - 5909280
Alignment:
Q  1 ttactactttaaacttcttaacatgtgcaaatttgcacatgatagtaaaaccc 53  Q
    |||||||||||||||||||| ||||||||||||| |||||||||| |||||||    
T  5909332 ttactactttaaacttcttatcatgtgcaaatttacacatgatagaaaaaccc 5909280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 23982805 - 23982753
Alignment:
Q  1 ttactactttaaacttcttaacatgtgcaaatttgcacatgatagtaaaaccc 53  Q
    ||||||||||||| |||||||| |||||||||||||||||||||| |||||||    
T  23982805 ttactactttaaatttcttaacgtgtgcaaatttgcacatgatagaaaaaccc 23982753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 33343116 - 33343168
Alignment:
Q  1 ttactactttaaacttcttaacatgtgcaaatttgcacatgatagtaaaaccc 53  Q
    |||||| |||||| ||||||||||||||||||||||||||||||| |||||||    
T  33343116 ttactattttaaatttcttaacatgtgcaaatttgcacatgatagaaaaaccc 33343168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 34270389 - 34270441
Alignment:
Q  1 ttactactttaaacttcttaacatgtgcaaatttgcacatgatagtaaaaccc 53  Q
    |||||| |||||| ||||||||||||||||||||||||||||||| |||||||    
T  34270389 ttactattttaaatttcttaacatgtgcaaatttgcacatgatagaaaaaccc 34270441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 47457511 - 47457459
Alignment:
Q  1 ttactactttaaacttcttaacatgtgcaaatttgcacatgatagtaaaaccc 53  Q
    ||||||||||||| || |||||||||||||||||||||||||||| |||||||    
T  47457511 ttactactttaaattttttaacatgtgcaaatttgcacatgatagaaaaaccc 47457459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 8091362 - 8091311
Alignment:
Q  1 ttactactttaaacttcttaacatgtgcaaatttgcacatgatagtaaaacc 52  Q
    |||||| |||||||||||||||||||| ||||||||||||||||| ||||||    
T  8091362 ttactattttaaacttcttaacatgtgtaaatttgcacatgatagaaaaacc 8091311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 8 - 63
Target Start/End: Complemental strand, 12085974 - 12085919
Alignment:
Q  8 tttaaacttcttaacatgtgcaaatttgcacatgatagtaaaacccttattaaaat 63  Q
    |||||||||||||  ||||||||||||||||||||||| ||||||||| |||||||    
T  12085974 tttaaacttcttattatgtgcaaatttgcacatgatagaaaaaccctttttaaaat 12085919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 36548510 - 36548467
Alignment:
Q  1 ttactactttaaacttcttaacatgtgcaaatttgcacatgata 44  Q
    |||||| |||||||||||||||||||||||||||||||||||||    
T  36548510 ttactaatttaaacttcttaacatgtgcaaatttgcacatgata 36548467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 384480 - 384431
Alignment:
Q  1 ttactactttaaacttcttaacatgtgcaaatttgcacatgatagtaaaac 51  Q
    ||||||||||||||||||||||||||||||||||||| ||||||| |||||    
T  384480 ttactactttaaacttcttaacatgtgcaaatttgca-atgatagaaaaac 384431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 22334071 - 22334029
Alignment:
Q  1 ttactactttaaacttcttaacatgtgcaaatttgcacatgat 43  Q
    |||||||||||||||||||||||||| ||||||||||||||||    
T  22334071 ttactactttaaacttcttaacatgtacaaatttgcacatgat 22334029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 8 - 54
Target Start/End: Complemental strand, 24462998 - 24462952
Alignment:
Q  8 tttaaacttcttaacatgtgcaaatttgcacatgatagtaaaaccct 54  Q
    |||||||||||||||||||||||||||||||||||||| || |||||    
T  24462998 tttaaacttcttaacatgtgcaaatttgcacatgatagaaataccct 24462952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 5833483 - 5833532
Alignment:
Q  1 ttactactttaaacttcttaacatgtgcaaatttgcacatgatagtaaaa 50  Q
    ||||| |||||||||| |||||||||||||||||||||||||||| ||||    
T  5833483 ttactgctttaaactttttaacatgtgcaaatttgcacatgatagaaaaa 5833532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 8 - 45
Target Start/End: Complemental strand, 18102273 - 18102236
Alignment:
Q  8 tttaaacttcttaacatgtgcaaatttgcacatgatag 45  Q
    ||||||||||||||||||||||||||||||||||||||    
T  18102273 tttaaacttcttaacatgtgcaaatttgcacatgatag 18102236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 33072109 - 33072161
Alignment:
Q  1 ttactactttaaacttcttaacatgtgcaaatttgcacatgatagtaaaaccc 53  Q
    |||||| |||||| |||||||||||| |||||||||||||||||| |||||||    
T  33072109 ttactattttaaatttcttaacatgtacaaatttgcacatgatagaaaaaccc 33072161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 41331506 - 41331462
Alignment:
Q  1 ttactactttaaacttcttaacatgtgcaaatttgcacatgatag 45  Q
    ||||||||||||| |||||| ||||||||||||||||||||||||    
T  41331506 ttactactttaaatttcttatcatgtgcaaatttgcacatgatag 41331462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 2 - 54
Target Start/End: Original strand, 42750412 - 42750464
Alignment:
Q  2 tactactttaaacttcttaacatgtgcaaatttgcacatgatagtaaaaccct 54  Q
    ||||||||||||||||||||||| |||||||||||| ||||||| ||| ||||    
T  42750412 tactactttaaacttcttaacatatgcaaatttgcatatgatagaaaacccct 42750464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 8 - 51
Target Start/End: Original strand, 8595032 - 8595075
Alignment:
Q  8 tttaaacttcttaacatgtgcaaatttgcacatgatagtaaaac 51  Q
    |||||||||||||||||||| ||||||||||||||||| |||||    
T  8595032 tttaaacttcttaacatgtgtaaatttgcacatgatagaaaaac 8595075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 8 - 51
Target Start/End: Complemental strand, 29398177 - 29398134
Alignment:
Q  8 tttaaacttcttaacatgtgcaaatttgcacatgatagtaaaac 51  Q
    |||||||||||||||||||||||||||| ||||||||| |||||    
T  29398177 tttaaacttcttaacatgtgcaaatttgaacatgatagaaaaac 29398134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 8 - 51
Target Start/End: Complemental strand, 29692583 - 29692540
Alignment:
Q  8 tttaaacttcttaacatgtgcaaatttgcacatgatagtaaaac 51  Q
    ||||||||||||||||||| |||||||||||||||||| |||||    
T  29692583 tttaaacttcttaacatgtacaaatttgcacatgatagaaaaac 29692540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 8 - 51
Target Start/End: Original strand, 45501594 - 45501637
Alignment:
Q  8 tttaaacttcttaacatgtgcaaatttgcacatgatagtaaaac 51  Q
    |||||||||||||| ||||||||||||||||||||||| |||||    
T  45501594 tttaaacttcttaagatgtgcaaatttgcacatgatagaaaaac 45501637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 24250626 - 24250676
Alignment:
Q  1 ttactactttaaacttcttaacatgtgcaaatttgcacatgatagtaaaac 51  Q
    |||||||||||||||||||| ||||| ||||||| |||||||||| |||||    
T  24250626 ttactactttaaacttcttatcatgttcaaatttccacatgatagaaaaac 24250676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 8 - 50
Target Start/End: Complemental strand, 26050504 - 26050462
Alignment:
Q  8 tttaaacttcttaacatgtgcaaatttgcacatgatagtaaaa 50  Q
    |||||| ||||||||||||||||||||||||||||||| ||||    
T  26050504 tttaaatttcttaacatgtgcaaatttgcacatgatagaaaaa 26050462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 8 - 50
Target Start/End: Complemental strand, 26059863 - 26059821
Alignment:
Q  8 tttaaacttcttaacatgtgcaaatttgcacatgatagtaaaa 50  Q
    |||||| ||||||||||||||||||||||||||||||| ||||    
T  26059863 tttaaatttcttaacatgtgcaaatttgcacatgatagaaaaa 26059821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 8 - 45
Target Start/End: Original strand, 26037228 - 26037265
Alignment:
Q  8 tttaaacttcttaacatgtgcaaatttgcacatgatag 45  Q
    ||||||||||||||||| ||||||||||||||||||||    
T  26037228 tttaaacttcttaacatctgcaaatttgcacatgatag 26037265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 12 - 52
Target Start/End: Complemental strand, 22041765 - 22041725
Alignment:
Q  12 aacttcttaacatgtgcaaatttgcacatgatagtaaaacc 52  Q
    |||||||||||| ||||||||||||||||||||| ||||||    
T  22041765 aacttcttaacaagtgcaaatttgcacatgatagaaaaacc 22041725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 8 - 44
Target Start/End: Complemental strand, 44473555 - 44473519
Alignment:
Q  8 tttaaacttcttaacatgtgcaaatttgcacatgata 44  Q
    ||||||||||||||||||| |||||||||||||||||    
T  44473555 tttaaacttcttaacatgttcaaatttgcacatgata 44473519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 8170649 - 8170692
Alignment:
Q  1 ttactactttaaacttcttaacatgtgcaaatttgcacatgata 44  Q
    |||||||||||||||| |||||||||| ||||||| ||||||||    
T  8170649 ttactactttaaactttttaacatgtgtaaatttgtacatgata 8170692  T

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Target: chr7; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 8 - 50
Target Start/End: Complemental strand, 7899529 - 7899487
Alignment:
Q  8 tttaaacttcttaacatgtgcaaatttgcacatgatagtaaaa 50  Q
    |||||| || |||||||||||||||||||||||||||| ||||    
T  7899529 tttaaattttttaacatgtgcaaatttgcacatgatagaaaaa 7899487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 26300699 - 26300741
Alignment:
Q  1 ttactactttaaacttcttaacatgtgcaaatttgcacatgat 43  Q
    |||||| ||||||||| |||||||||||||||||| |||||||    
T  26300699 ttactattttaaactttttaacatgtgcaaatttgtacatgat 26300741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 11 - 52
Target Start/End: Original strand, 6587924 - 6587965
Alignment:
Q  11 aaacttcttaacatgtgcaaatttgcacatgatagtaaaacc 52  Q
    |||||| |||| ||||||||||||||||||||||| ||||||    
T  6587924 aaactttttaatatgtgcaaatttgcacatgatagaaaaacc 6587965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 8 - 57
Target Start/End: Original strand, 8561589 - 8561637
Alignment:
Q  8 tttaaacttcttaacatgtgcaaatttgcacatgatagtaaaacccttat 57  Q
    ||||||| ||||||||||| |||||||||||||||||  |||||||||||    
T  8561589 tttaaacgtcttaacatgt-caaatttgcacatgataaaaaaacccttat 8561637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 7 - 44
Target Start/End: Original strand, 27300563 - 27300600
Alignment:
Q  7 ctttaaacttcttaacatgtgcaaatttgcacatgata 44  Q
    ||||||||||||||| ||||||||||||| ||||||||    
T  27300563 ctttaaacttcttaatatgtgcaaatttgtacatgata 27300600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 8 - 64
Target Start/End: Complemental strand, 2443947 - 2443893
Alignment:
Q  8 tttaaacttcttaacatgtgcaaatttgcacatgatagtaaaacccttattaaaata 64  Q
    |||||||||||||||||||| ||||||| | ||||||| ||||||| ||||||||||    
T  2443947 tttaaacttcttaacatgtgtaaatttgaatatgatag-aaaaccc-tattaaaata 2443893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 49; Significance: 4e-19; HSPs: 49)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 313877 - 313929
Alignment:
Q  1 ttactactttaaacttcttaacatgtgcaaatttgcacatgatagtaaaaccc 53  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  313877 ttactactttaaacttcttaacatgtgcaaatttgcacatgatagaaaaaccc 313929  T

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Target: chr1; HSP #2
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 6570035 - 6569983
Alignment:
Q  1 ttactactttaaacttcttaacatgtgcaaatttgcacatgatagtaaaaccc 53  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  6570035 ttactactttaaacttcttaacatgtgcaaatttgcacatgatagaaaaaccc 6569983  T

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Target: chr1; HSP #3
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 39150377 - 39150321
Alignment:
Q  1 ttactactttaaacttcttaacatgtgcaaatttgcacatgatagtaaaacccttat 57  Q
    |||||||||||||||||||| |||||||||||||||||||||||| |||||||||||    
T  39150377 ttactactttaaacttcttatcatgtgcaaatttgcacatgatagaaaaacccttat 39150321  T

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Target: chr1; HSP #4
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 30172007 - 30172062
Alignment:
Q  1 ttactactttaaacttcttaacatgtgcaaatttgcacatgatagtaaaaccctta 56  Q
    |||| |||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  30172007 ttaccactttaaacttcttaacatgtgcaaatttgcacatgatagaaaaaccctta 30172062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 30187548 - 30187603
Alignment:
Q  1 ttactactttaaacttcttaacatgtgcaaatttgcacatgatagtaaaaccctta 56  Q
    |||| |||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  30187548 ttaccactttaaacttcttaacatgtgcaaatttgcacatgatagaaaaaccctta 30187603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 8 - 61
Target Start/End: Original strand, 6180321 - 6180374
Alignment:
Q  8 tttaaacttcttaacatgtgcaaatttgcacatgatagtaaaacccttattaaa 61  Q
    |||||||||||||||||||||||||||||||||||||| |||||||| ||||||    
T  6180321 tttaaacttcttaacatgtgcaaatttgcacatgatagaaaaaccctaattaaa 6180374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 6754599 - 6754651
Alignment:
Q  1 ttactactttaaacttcttaacatgtgcaaatttgcacatgatagtaaaaccc 53  Q
    |||||||||||||||||||| |||||||||||||||||||||||| |||||||    
T  6754599 ttactactttaaacttcttatcatgtgcaaatttgcacatgatagaaaaaccc 6754651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 8 - 56
Target Start/End: Original strand, 35512860 - 35512908
Alignment:
Q  8 tttaaacttcttaacatgtgcaaatttgcacatgatagtaaaaccctta 56  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||    
T  35512860 tttaaacttcttaacatgtgcaaatttgcacatgatagaaaaaccctta 35512908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 30288914 - 30288863
Alignment:
Q  1 ttactactttaaacttcttaacatgtgcaaatttgcacatgatagtaaaacc 52  Q
    ||||||||||||||||||||||||||| ||||||||||||||||| ||||||    
T  30288914 ttactactttaaacttcttaacatgtgtaaatttgcacatgatagaaaaacc 30288863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 5 - 55
Target Start/End: Original strand, 6307634 - 6307684
Alignment:
Q  5 tactttaaacttcttaacatgtgcaaatttgcacatgatagtaaaaccctt 55  Q
    ||||||||||||||||||||||||||||||||||||||||  |||||||||    
T  6307634 tactttaaacttcttaacatgtgcaaatttgcacatgatataaaaaccctt 6307684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 17919581 - 17919635
Alignment:
Q  1 ttactactttaaacttcttaacatgtgcaaatttgcacatgatagtaaaaccctt 55  Q
    ||||||||||||||||||||  ||||||||||||||||||||||| |||||||||    
T  17919581 ttactactttaaacttcttattatgtgcaaatttgcacatgatagaaaaaccctt 17919635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 23576464 - 23576410
Alignment:
Q  1 ttactactttaaacttcttaacatgtgcaaatttgcacatgatagtaaaaccctt 55  Q
    |||||| |||||| ||||||||||||||||||||||||||||||| |||||||||    
T  23576464 ttactattttaaatttcttaacatgtgcaaatttgcacatgatagaaaaaccctt 23576410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 44918152 - 44918206
Alignment:
Q  1 ttactactttaaacttcttaacatgtgcaaatttgcacatgatagtaaaaccctt 55  Q
    ||||||||||||| ||||||||||||| ||||||||||||||||| |||||||||    
T  44918152 ttactactttaaatttcttaacatgtgtaaatttgcacatgatagaaaaaccctt 44918206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 8 - 58
Target Start/End: Original strand, 51382449 - 51382499
Alignment:
Q  8 tttaaacttcttaacatgtgcaaatttgcacatgatagtaaaacccttatt 58  Q
    |||||||||||||||||||||||| ||||||||||||| ||||||||||||    
T  51382449 tttaaacttcttaacatgtgcaaagttgcacatgatagaaaaacccttatt 51382499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 8 - 57
Target Start/End: Original strand, 22167470 - 22167519
Alignment:
Q  8 tttaaacttcttaacatgtgcaaatttgcacatgatagtaaaacccttat 57  Q
    ||||||||||||| |||||||||||||||||||||||| |||||||||||    
T  22167470 tttaaacttcttatcatgtgcaaatttgcacatgataggaaaacccttat 22167519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 25465286 - 25465339
Alignment:
Q  1 ttactactttaaacttcttaacatgtgcaaatttgcacatgatagtaaaaccct 54  Q
    |||||| ||| |||||||||||||||||||||||||||||||||| ||||||||    
T  25465286 ttactattttgaacttcttaacatgtgcaaatttgcacatgatagaaaaaccct 25465339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 8 - 53
Target Start/End: Original strand, 34802102 - 34802147
Alignment:
Q  8 tttaaacttcttaacatgtgcaaatttgcacatgatagtaaaaccc 53  Q
    |||||||||||||||||||||||||||||||||||||| |||||||    
T  34802102 tttaaacttcttaacatgtgcaaatttgcacatgatagaaaaaccc 34802147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 41624957 - 41625010
Alignment:
Q  1 ttactactttaaacttcttaacatgtgcaaatttgcacatgatagtaaaaccct 54  Q
    |||||||||||||||||||| ||| |||||||||||||||||||| ||||||||    
T  41624957 ttactactttaaacttcttatcatatgcaaatttgcacatgatagaaaaaccct 41625010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 1502770 - 1502718
Alignment:
Q  1 ttactactttaaacttcttaacatgtgcaaatttgcacatgatagtaaaaccc 53  Q
    |||||| |||||| ||||||||||||||||||||||||||||||| |||||||    
T  1502770 ttactattttaaatttcttaacatgtgcaaatttgcacatgatagaaaaaccc 1502718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 8 - 60
Target Start/End: Complemental strand, 5875258 - 5875206
Alignment:
Q  8 tttaaacttcttaacatgtgcaaatttgcacatgatagtaaaacccttattaa 60  Q
    |||||||||||||||||||||||||||||||||||||| |||| ||| |||||    
T  5875258 tttaaacttcttaacatgtgcaaatttgcacatgatagaaaaatcctaattaa 5875206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 36490907 - 36490959
Alignment:
Q  1 ttactactttaaacttcttaacatgtgcaaatttgcacatgatagtaaaaccc 53  Q
    |||||| ||||||||||||||||||||||||||||| |||||||| |||||||    
T  36490907 ttactattttaaacttcttaacatgtgcaaatttgctcatgatagaaaaaccc 36490959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 12 - 64
Target Start/End: Original strand, 38812879 - 38812931
Alignment:
Q  12 aacttcttaacatgtgcaaatttgcacatgatagtaaaacccttattaaaata 64  Q
    |||||||||||||||||||||||||||||||||| ||||||| || |||||||    
T  38812879 aacttcttaacatgtgcaaatttgcacatgatagaaaaacccataataaaata 38812931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 10896481 - 10896532
Alignment:
Q  1 ttactactttaaacttcttaacatgtgcaaatttgcacatgatagtaaaacc 52  Q
    |||||||||||||||||||||||||||||| ||| |||||||||| ||||||    
T  10896481 ttactactttaaacttcttaacatgtgcaattttacacatgatagaaaaacc 10896532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 8 - 54
Target Start/End: Complemental strand, 39310829 - 39310783
Alignment:
Q  8 tttaaacttcttaacatgtgcaaatttgcacatgatagtaaaaccct 54  Q
    ||||||||| |||||||||||||||||||||||||||| ||||||||    
T  39310829 tttaaactttttaacatgtgcaaatttgcacatgatagaaaaaccct 39310783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 8 - 56
Target Start/End: Complemental strand, 3168111 - 3168063
Alignment:
Q  8 tttaaacttcttaacatgtgcaaatttgcacatgatagtaaaaccctta 56  Q
    ||||||||| ||||| |||||||||||||||||||||| ||||||||||    
T  3168111 tttaaactttttaacgtgtgcaaatttgcacatgatagaaaaaccctta 3168063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 6 - 58
Target Start/End: Original strand, 4249339 - 4249391
Alignment:
Q  6 actttaaacttcttaacatgtgcaaatttgcacatgatagtaaaacccttatt 58  Q
    ||||||||||| ||||||||||| |||||||||||| ||| ||||||||||||    
T  4249339 actttaaacttattaacatgtgcgaatttgcacatgttagaaaaacccttatt 4249391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 6 - 58
Target Start/End: Original strand, 4249663 - 4249715
Alignment:
Q  6 actttaaacttcttaacatgtgcaaatttgcacatgatagtaaaacccttatt 58  Q
    ||||||||||| ||||||||||| |||||||||||| ||| ||||||||||||    
T  4249663 actttaaacttattaacatgtgcgaatttgcacatgttagaaaaacccttatt 4249715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 6 - 58
Target Start/End: Original strand, 4249987 - 4250039
Alignment:
Q  6 actttaaacttcttaacatgtgcaaatttgcacatgatagtaaaacccttatt 58  Q
    ||||||||||| ||||||||||| |||||||||||| ||| ||||||||||||    
T  4249987 actttaaacttattaacatgtgcgaatttgcacatgttagaaaaacccttatt 4250039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 8 - 52
Target Start/End: Original strand, 13322011 - 13322055
Alignment:
Q  8 tttaaacttcttaacatgtgcaaatttgcacatgatagtaaaacc 52  Q
    ||||||||||||||||| |||||||||||||||||||| ||||||    
T  13322011 tttaaacttcttaacatatgcaaatttgcacatgatagaaaaacc 13322055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 19066626 - 19066681
Alignment:
Q  1 ttactactttaaacttcttaacatgtgcaaatttgcacatgatagtaaaaccctta 56  Q
    ||||| |||||||||| |||||||||||||||||  ||||||||| ||||||||||    
T  19066626 ttactgctttaaactttttaacatgtgcaaatttatacatgatagaaaaaccctta 19066681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 19114516 - 19114571
Alignment:
Q  1 ttactactttaaacttcttaacatgtgcaaatttgcacatgatagtaaaaccctta 56  Q
    ||||| |||||||||| |||||||||||||||||  ||||||||| ||||||||||    
T  19114516 ttactgctttaaactttttaacatgtgcaaatttatacatgatagaaaaaccctta 19114571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 39930851 - 39930812
Alignment:
Q  1 ttactactttaaacttcttaacatgtgcaaatttgcacat 40  Q
    |||||||||||||||||||| |||||||||||||||||||    
T  39930851 ttactactttaaacttcttatcatgtgcaaatttgcacat 39930812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 8062332 - 8062370
Alignment:
Q  1 ttactactttaaacttcttaacatgtgcaaatttgcaca 39  Q
    |||||||||||||||| ||||||||||||||||||||||    
T  8062332 ttactactttaaactttttaacatgtgcaaatttgcaca 8062370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 8 - 50
Target Start/End: Original strand, 35438850 - 35438892
Alignment:
Q  8 tttaaacttcttaacatgtgcaaatttgcacatgatagtaaaa 50  Q
    |||||| ||||||||||||||||||||||||||||||| ||||    
T  35438850 tttaaatttcttaacatgtgcaaatttgcacatgatagaaaaa 35438892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 11 - 52
Target Start/End: Complemental strand, 5879143 - 5879102
Alignment:
Q  11 aaacttcttaacatgtgcaaatttgcacatgatagtaaaacc 52  Q
    |||||||||||||||||||||||| |||||||||| ||||||    
T  5879143 aaacttcttaacatgtgcaaatttacacatgatagaaaaacc 5879102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 57
Target Start/End: Original strand, 3096341 - 3096393
Alignment:
Q  5 tactttaaacttcttaacatgtgcaaatttgcacatgatagtaaaacccttat 57  Q
    ||||||||| || ||| ||||||||||||||||||| |||| |||||||||||    
T  3096341 tactttaaattttttatcatgtgcaaatttgcacataatagaaaaacccttat 3096393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 15 - 51
Target Start/End: Original strand, 23591840 - 23591876
Alignment:
Q  15 ttcttaacatgtgcaaatttgcacatgatagtaaaac 51  Q
    ||||||||||||||||||||||||||||||| |||||    
T  23591840 ttcttaacatgtgcaaatttgcacatgatagaaaaac 23591876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 30363045 - 30362993
Alignment:
Q  1 ttactactttaaacttcttaacatgtgcaaatttgcacatgatagtaaaaccc 53  Q
    |||||| |||||| || ||| |||||||||||||||||||||||| |||||||    
T  30363045 ttactattttaaatttgttatcatgtgcaaatttgcacatgatagaaaaaccc 30362993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 1366175 - 1366230
Alignment:
Q  1 ttactactttaaacttcttaacatgtgcaaatttgcacatgatagtaaaaccctta 56  Q
    |||||| |||||| ||||| ||||||| ||||||||||||||||| ||||| ||||    
T  1366175 ttactattttaaatttctttacatgtgtaaatttgcacatgatagaaaaactctta 1366230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 15 - 50
Target Start/End: Complemental strand, 41676596 - 41676561
Alignment:
Q  15 ttcttaacatgtgcaaatttgcacatgatagtaaaa 50  Q
    ||||||||||||||||||||||||||||||| ||||    
T  41676596 ttcttaacatgtgcaaatttgcacatgatagaaaaa 41676561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 8 - 51
Target Start/End: Complemental strand, 51920474 - 51920431
Alignment:
Q  8 tttaaacttcttaacatgtgcaaatttgcacatgatagtaaaac 51  Q
    |||||| || |||||||||||||||||||||||||||| |||||    
T  51920474 tttaaatttattaacatgtgcaaatttgcacatgatagaaaaac 51920431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 8 - 50
Target Start/End: Original strand, 9516716 - 9516758
Alignment:
Q  8 tttaaacttcttaacatgtgcaaatttgcacatgatagtaaaa 50  Q
    |||||| |||||||||||||||||||| |||||||||| ||||    
T  9516716 tttaaatttcttaacatgtgcaaatttacacatgatagaaaaa 9516758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 8 - 50
Target Start/End: Original strand, 13241892 - 13241934
Alignment:
Q  8 tttaaacttcttaacatgtgcaaatttgcacatgatagtaaaa 50  Q
    |||||| |||||||||||||||||||| |||||||||| ||||    
T  13241892 tttaaatttcttaacatgtgcaaattttcacatgatagaaaaa 13241934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 8 - 50
Target Start/End: Original strand, 32201759 - 32201801
Alignment:
Q  8 tttaaacttcttaacatgtgcaaatttgcacatgatagtaaaa 50  Q
    |||||||||||||| |||||||||||||||||| |||| ||||    
T  32201759 tttaaacttcttaatatgtgcaaatttgcacataatagaaaaa 32201801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 34
Target Start/End: Complemental strand, 44007577 - 44007547
Alignment:
Q  4 ctactttaaacttcttaacatgtgcaaattt 34  Q
    |||||||||||||||||||||||||||||||    
T  44007577 ctactttaaacttcttaacatgtgcaaattt 44007547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 24669055 - 24669088
Alignment:
Q  1 ttactactttaaacttcttaacatgtgcaaattt 34  Q
    |||||| |||||||||||||||||||||||||||    
T  24669055 ttactattttaaacttcttaacatgtgcaaattt 24669088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 8 - 51
Target Start/End: Complemental strand, 7520040 - 7519996
Alignment:
Q  8 tttaaacttcttaacatgtgcaaa-tttgcacatgatagtaaaac 51  Q
    |||||||||||||||||||| ||| |||||||||||||| |||||    
T  7520040 tttaaacttcttaacatgtgaaaattttgcacatgatagaaaaac 7519996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 8 - 40
Target Start/End: Original strand, 28016315 - 28016347
Alignment:
Q  8 tttaaacttcttaacatgtgcaaatttgcacat 40  Q
    |||||| ||||||||||||||||||||||||||    
T  28016315 tttaaaattcttaacatgtgcaaatttgcacat 28016347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 44
Target Start/End: Complemental strand, 32543089 - 32543057
Alignment:
Q  12 aacttcttaacatgtgcaaatttgcacatgata 44  Q
    |||||||||||||||||||||||||| ||||||    
T  32543089 aacttcttaacatgtgcaaatttgcatatgata 32543057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 47; Significance: 6e-18; HSPs: 37)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 17552637 - 17552579
Alignment:
Q  1 ttactactttaaacttcttaacatgtgcaaatttgcacatgatagtaaaacccttatta 59  Q
    |||||| |||||| ||||||||||||||||||||||||||||||| |||||||||||||    
T  17552637 ttactattttaaatttcttaacatgtgcaaatttgcacatgatagaaaaacccttatta 17552579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 3853071 - 3853123
Alignment:
Q  1 ttactactttaaacttcttaacatgtgcaaatttgcacatgatagtaaaaccc 53  Q
    ||||||||||||| ||||||||||||||||||||||||||||||| |||||||    
T  3853071 ttactactttaaatttcttaacatgtgcaaatttgcacatgatagaaaaaccc 3853123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 10887157 - 10887213
Alignment:
Q  1 ttactactttaaacttcttaacatgtgcaaatttgcacatgatagtaaaacccttat 57  Q
    |||| |||||||||||||||||||||||||||||||||||||||| ||||| |||||    
T  10887157 ttaccactttaaacttcttaacatgtgcaaatttgcacatgatagaaaaactcttat 10887213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 29863352 - 29863301
Alignment:
Q  1 ttactactttaaacttcttaacatgtgcaaatttgcacatgatagtaaaacc 52  Q
    |||||| |||||||||||||||||||||||||||||||||||||| ||||||    
T  29863352 ttactattttaaacttcttaacatgtgcaaatttgcacatgatagaaaaacc 29863301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 31568237 - 31568288
Alignment:
Q  1 ttactactttaaacttcttaacatgtgcaaatttgcacatgatagtaaaacc 52  Q
    |||||||||||||||| |||||||||||||||||||||||||||| ||||||    
T  31568237 ttactactttaaactttttaacatgtgcaaatttgcacatgatagaaaaacc 31568288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 8 - 58
Target Start/End: Original strand, 34692489 - 34692539
Alignment:
Q  8 tttaaacttcttaacatgtgcaaatttgcacatgatagtaaaacccttatt 58  Q
    |||||||||||||||||||||||||||||||||||||| ||||||| ||||    
T  34692489 tttaaacttcttaacatgtgcaaatttgcacatgatagaaaaacccatatt 34692539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 28943819 - 28943766
Alignment:
Q  1 ttactactttaaacttcttaacatgtgcaaatttgcacatgatagtaaaaccct 54  Q
    |||||| |||||| ||||||||||||||||||||||||||||||| ||||||||    
T  28943819 ttactattttaaatttcttaacatgtgcaaatttgcacatgatagaaaaaccct 28943766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 14228176 - 14228124
Alignment:
Q  1 ttactactttaaacttcttaacatgtgcaaatttgcacatgatagtaaaaccc 53  Q
    |||||| |||||| ||||||||||||||||||||||||||||||| |||||||    
T  14228176 ttactattttaaatttcttaacatgtgcaaatttgcacatgatagaaaaaccc 14228124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 17596469 - 17596521
Alignment:
Q  1 ttactactttaaacttcttaacatgtgcaaatttgcacatgatagtaaaaccc 53  Q
    |||||||||||||||||||| ||||| |||||||||||||||||| |||||||    
T  17596469 ttactactttaaacttcttatcatgtacaaatttgcacatgatagaaaaaccc 17596521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 8 - 55
Target Start/End: Original strand, 13391810 - 13391857
Alignment:
Q  8 tttaaacttcttaacatgtgcaaatttgcacatgatagtaaaaccctt 55  Q
    |||||||||||||||||| ||||||||||||||||||| |||||||||    
T  13391810 tttaaacttcttaacatgcgcaaatttgcacatgatagaaaaaccctt 13391857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 6 - 53
Target Start/End: Complemental strand, 18332733 - 18332686
Alignment:
Q  6 actttaaacttcttaacatgtgcaaatttgcacatgatagtaaaaccc 53  Q
    |||||||||||||||||||||| ||||||||||||||||| |||||||    
T  18332733 actttaaacttcttaacatgtgaaaatttgcacatgatagaaaaaccc 18332686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 5 - 52
Target Start/End: Complemental strand, 32614990 - 32614943
Alignment:
Q  5 tactttaaacttcttaacatgtgcaaatttgcacatgatagtaaaacc 52  Q
    ||||||||||||||||||||||||||||||| ||||||||| ||||||    
T  32614990 tactttaaacttcttaacatgtgcaaatttgtacatgatagaaaaacc 32614943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 8 - 53
Target Start/End: Complemental strand, 2830724 - 2830679
Alignment:
Q  8 tttaaacttcttaacatgtgcaaatttgcacatgatagtaaaaccc 53  Q
    |||||||||||||||||||||||||||| ||||||||| |||||||    
T  2830724 tttaaacttcttaacatgtgcaaatttgtacatgatagaaaaaccc 2830679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 6016984 - 6017033
Alignment:
Q  1 ttactactttaaacttcttaacatgtgcaaatttgcacatgatagtaaaa 50  Q
    |||| ||||||||||| |||||||||||||||||||||||||||| ||||    
T  6016984 ttaccactttaaactttttaacatgtgcaaatttgcacatgatagaaaaa 6017033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 8 - 45
Target Start/End: Original strand, 20979107 - 20979144
Alignment:
Q  8 tttaaacttcttaacatgtgcaaatttgcacatgatag 45  Q
    ||||||||||||||||||||||||||||||||||||||    
T  20979107 tttaaacttcttaacatgtgcaaatttgcacatgatag 20979144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 31069632 - 31069583
Alignment:
Q  1 ttactactttaaacttcttaacatgtgcaaatttgcacatgatagtaaaa 50  Q
    |||||| |||||||||||||||||||| ||||||||||||||||| ||||    
T  31069632 ttactaatttaaacttcttaacatgtgtaaatttgcacatgatagaaaaa 31069583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 31169813 - 31169761
Alignment:
Q  1 ttactactttaaacttcttaacatgtgcaaatttgcacatgatagtaaaaccc 53  Q
    ||||||||||||| || ||||||||||||||||| |||||||||| |||||||    
T  31169813 ttactactttaaatttgttaacatgtgcaaatttacacatgatagaaaaaccc 31169761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 10 - 61
Target Start/End: Original strand, 8467790 - 8467841
Alignment:
Q  10 taaacttcttaacatgtgcaaatttgcacatgatagtaaaacccttattaaa 61  Q
    ||||||||||||||||| |||||||||| ||||||| ||||||||| |||||    
T  8467790 taaacttcttaacatgtacaaatttgcatatgatagaaaaaccctttttaaa 8467841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 8 - 51
Target Start/End: Complemental strand, 24979192 - 24979149
Alignment:
Q  8 tttaaacttcttaacatgtgcaaatttgcacatgatagtaaaac 51  Q
    ||||||| |||||||||||||||||||||||||||||| |||||    
T  24979192 tttaaacatcttaacatgtgcaaatttgcacatgatagaaaaac 24979149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 8 - 51
Target Start/End: Complemental strand, 27819670 - 27819627
Alignment:
Q  8 tttaaacttcttaacatgtgcaaatttgcacatgatagtaaaac 51  Q
    |||||||||||||||||||||||||||| ||||||||| |||||    
T  27819670 tttaaacttcttaacatgtgcaaatttgtacatgatagaaaaac 27819627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 29065475 - 29065424
Alignment:
Q  1 ttactactttaaacttcttaacatgtgcaaatttgcacatgatagtaaaacc 52  Q
    |||||| ||||||||| ||||||||||||| |||||||||||||| ||||||    
T  29065475 ttactattttaaactttttaacatgtgcaagtttgcacatgatagaaaaacc 29065424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 29120328 - 29120277
Alignment:
Q  1 ttactactttaaacttcttaacatgtgcaaatttgcacatgatagtaaaacc 52  Q
    |||||| ||||||||| ||||||||||||| |||||||||||||| ||||||    
T  29120328 ttactattttaaactttttaacatgtgcaagtttgcacatgatagaaaaacc 29120277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 31503870 - 31503909
Alignment:
Q  1 ttactactttaaacttcttaacatgtgcaaatttgcacat 40  Q
    ||||||||||||| ||||||||||||||||||||||||||    
T  31503870 ttactactttaaatttcttaacatgtgcaaatttgcacat 31503909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 8 - 54
Target Start/End: Original strand, 3261213 - 3261259
Alignment:
Q  8 tttaaacttcttaacatgtgcaaatttgcacatgatagtaaaaccct 54  Q
    ||||||||| |||||||||| ||||||||||||||||| ||||||||    
T  3261213 tttaaactttttaacatgtgtaaatttgcacatgatagaaaaaccct 3261259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 33017852 - 33017905
Alignment:
Q  1 ttactactttaaacttcttaacatgtgcaaatttgcacatgatagtaaaaccct 54  Q
    |||||| |||||| || ||||||||||||||||||||||| |||| ||||||||    
T  33017852 ttactattttaaattttttaacatgtgcaaatttgcacataatagaaaaaccct 33017905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 1017828 - 1017788
Alignment:
Q  1 ttactactttaaacttcttaacatgtgcaaatttgcacatg 41  Q
    ||||||||||||||||||||||||||| |||||| ||||||    
T  1017828 ttactactttaaacttcttaacatgtgtaaatttacacatg 1017788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 11 - 51
Target Start/End: Complemental strand, 30591203 - 30591163
Alignment:
Q  11 aaacttcttaacatgtgcaaatttgcacatgatagtaaaac 51  Q
    ||||||||||||||||| ||||||||||||||||| |||||    
T  30591203 aaacttcttaacatgtgtaaatttgcacatgatagaaaaac 30591163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 8 - 51
Target Start/End: Original strand, 4371974 - 4372017
Alignment:
Q  8 tttaaacttcttaacatgtgcaaatttgcacatgatagtaaaac 51  Q
    |||||||||||||||||||| |||||||| |||||||| |||||    
T  4371974 tttaaacttcttaacatgtgtaaatttgcgcatgatagaaaaac 4372017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 9 - 44
Target Start/End: Complemental strand, 23936418 - 23936383
Alignment:
Q  9 ttaaacttcttaacatgtgcaaatttgcacatgata 44  Q
    |||||||| |||||||||||||||||||||||||||    
T  23936418 ttaaacttgttaacatgtgcaaatttgcacatgata 23936383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 28469985 - 28470036
Alignment:
Q  1 ttactactttaaacttcttaacatgtgcaaatttgcacatgatagtaaaacc 52  Q
    |||||||||||   | ||||||||||||||||||||||||||||| ||||||    
T  28469985 ttactactttagtatccttaacatgtgcaaatttgcacatgatagaaaaacc 28470036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 8 - 51
Target Start/End: Complemental strand, 29074481 - 29074438
Alignment:
Q  8 tttaaacttcttaacatgtgcaaatttgcacatgatagtaaaac 51  Q
    ||||||||| ||||||||||||| |||||||||||||| |||||    
T  29074481 tttaaactttttaacatgtgcaagtttgcacatgatagaaaaac 29074438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 8 - 51
Target Start/End: Complemental strand, 29079245 - 29079202
Alignment:
Q  8 tttaaacttcttaacatgtgcaaatttgcacatgatagtaaaac 51  Q
    ||||||||| ||||||||||||| |||||||||||||| |||||    
T  29079245 tttaaactttttaacatgtgcaagtttgcacatgatagaaaaac 29079202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 8 - 51
Target Start/End: Complemental strand, 29107054 - 29107011
Alignment:
Q  8 tttaaacttcttaacatgtgcaaatttgcacatgatagtaaaac 51  Q
    ||||||||| ||||||||||||| |||||||||||||| |||||    
T  29107054 tttaaactttttaacatgtgcaagtttgcacatgatagaaaaac 29107011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 8977516 - 8977467
Alignment:
Q  1 ttactactttaaacttcttaacatgtgcaaatttgcacatgatagtaaaa 50  Q
    |||||| ||| |||||||||||| |||||||||| |||||||||| ||||    
T  8977516 ttactattttgaacttcttaacaagtgcaaatttacacatgatagaaaaa 8977467  T

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Target: chr6; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 15 - 56
Target Start/End: Original strand, 22284749 - 22284790
Alignment:
Q  15 ttcttaacatgtgcaaatttgcacatgatagtaaaaccctta 56  Q
    ||||| ||||||||||||||||||||||||| ||||| ||||    
T  22284749 ttcttgacatgtgcaaatttgcacatgatagaaaaactctta 22284790  T

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Target: chr6; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 34733751 - 34733694
Alignment:
Q  1 ttactactttaaacttcttaacatgtgcaaatttgcacatgatagtaaaacccttatt 58  Q
    |||||||||||   | ||||||||||||||||||||||||| ||| |||| |||||||    
T  34733751 ttactactttagtatccttaacatgtgcaaatttgcacatgttagaaaaatccttatt 34733694  T

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Target: chr6; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 22 - 54
Target Start/End: Complemental strand, 28247171 - 28247139
Alignment:
Q  22 catgtgcaaatttgcacatgatagtaaaaccct 54  Q
    |||||||||||||||||||||||| ||||||||    
T  28247171 catgtgcaaatttgcacatgatagaaaaaccct 28247139  T

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Target: scaffold0111 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0111
Description:

Target: scaffold0111; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 6 - 55
Target Start/End: Complemental strand, 37159 - 37110
Alignment:
Q  6 actttaaacttcttaacatgtgcaaatttgcacatgatagtaaaaccctt 55  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||    
T  37159 actttaaacttcttaacatgtgcaaatttgcacatgatagaaaaaccctt 37110  T

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Target: scaffold0011 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 13213 - 13264
Alignment:
Q  1 ttactactttaaacttcttaacatgtgcaaatttgcacatgatagtaaaacc 52  Q
    |||||| |||||||||||||||||||||||||||||||||||||| ||||||    
T  13213 ttactattttaaacttcttaacatgtgcaaatttgcacatgatagaaaaacc 13264  T

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Target: scaffold0727 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0727
Description:

Target: scaffold0727; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 5819 - 5873
Alignment:
Q  1 ttactactttaaacttcttaacatgtgcaaatttgcacatgatagtaaaaccctt 55  Q
    |||||||||||||||| |||||||||||||||||||||||||||| |||| ||||    
T  5819 ttactactttaaactttttaacatgtgcaaatttgcacatgatagaaaaatcctt 5873  T

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Target: scaffold0073 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0073
Description:

Target: scaffold0073; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 5 - 55
Target Start/End: Complemental strand, 16581 - 16531
Alignment:
Q  5 tactttaaacttcttaacatgtgcaaatttgcacatgatagtaaaaccctt 55  Q
    ||||||||||||||||||||||||||||||||||||||||  |||||||||    
T  16581 tactttaaacttcttaacatgtgcaaatttgcacatgatataaaaaccctt 16531  T

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Target: scaffold0018 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 2 - 56
Target Start/End: Original strand, 182171 - 182225
Alignment:
Q  2 tactactttaaacttcttaacatgtgcaaatttgcacatgatagtaaaaccctta 56  Q
    ||||||||||||||||||||||||| ||||||| |||||||||| ||||||||||    
T  182171 tactactttaaacttcttaacatgtacaaatttacacatgatagaaaaaccctta 182225  T

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Target: scaffold0155 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0155
Description:

Target: scaffold0155; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 3 - 53
Target Start/End: Complemental strand, 3461 - 3411
Alignment:
Q  3 actactttaaacttcttaacatgtgcaaatttgcacatgatagtaaaaccc 53  Q
    ||||||||||||||||||| |||||||||||| |||||||||| |||||||    
T  3461 actactttaaacttcttaatatgtgcaaatttacacatgatagaaaaaccc 3411  T

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Target: scaffold0136 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0136
Description:

Target: scaffold0136; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 8 - 44
Target Start/End: Complemental strand, 1486 - 1450
Alignment:
Q  8 tttaaacttcttaacatgtgcaaatttgcacatgata 44  Q
    |||||||||||||||||||||||||||||||||||||    
T  1486 tttaaacttcttaacatgtgcaaatttgcacatgata 1450  T

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Target: scaffold0192 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0192
Description:

Target: scaffold0192; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 13613 - 13574
Alignment:
Q  1 ttactactttaaacttcttaacatgtgcaaatttgcacat 40  Q
    |||||| |||||||||||||||||||||||||||||||||    
T  13613 ttactaatttaaacttcttaacatgtgcaaatttgcacat 13574  T

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Target: scaffold0618 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0618
Description:

Target: scaffold0618; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 8464 - 8420
Alignment:
Q  1 ttactactttaaacttcttaacatgtgcaaatttgcacatgatag 45  Q
    ||||||||||||| |||||||||| ||||||||| ||||||||||    
T  8464 ttactactttaaatttcttaacatatgcaaatttacacatgatag 8420  T

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Target: scaffold0128 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0128
Description:

Target: scaffold0128; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 8 - 52
Target Start/End: Complemental strand, 44337 - 44293
Alignment:
Q  8 tttaaacttcttaacatgtgcaaatttgcacatgatagtaaaacc 52  Q
    ||||||||| |||| ||||||||||||||||||||||| ||||||    
T  44337 tttaaactttttaatatgtgcaaatttgcacatgatagaaaaacc 44293  T

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Target: scaffold0036 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 11 - 51
Target Start/End: Complemental strand, 94058 - 94018
Alignment:
Q  11 aaacttcttaacatgtgcaaatttgcacatgatagtaaaac 51  Q
    |||||||||||||| |||||||||||||||||||| |||||    
T  94058 aaacttcttaacatatgcaaatttgcacatgatagaaaaac 94018  T

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Target: scaffold0229 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0229
Description:

Target: scaffold0229; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 24577 - 24522
Alignment:
Q  1 ttactactttaaacttcttaacatgtgcaaatttgcacatgatagtaaaaccctta 56  Q
    |||||| |||||| ||||| ||||||| ||||||||||||||||| ||||| ||||    
T  24577 ttactattttaaatttctttacatgtgtaaatttgcacatgatagaaaaactctta 24522  T

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Target: scaffold0074 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0074
Description:

Target: scaffold0074; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 45547 - 45497
Alignment:
Q  1 ttactactttaaacttcttaacatgtgcaaatttgcacatgatagtaaaac 51  Q
    |||||| |||||||||||| |||| || ||||||||||||||||| |||||    
T  45547 ttactattttaaacttctttacatatgtaaatttgcacatgatagaaaaac 45497  T

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Target: scaffold0157 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0157
Description:

Target: scaffold0157; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 44
Target Start/End: Complemental strand, 21106 - 21074
Alignment:
Q  12 aacttcttaacatgtgcaaatttgcacatgata 44  Q
    ||||||||||||||||||||||| |||||||||    
T  21106 aacttcttaacatgtgcaaatttacacatgata 21074  T

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Target: scaffold0038 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0038
Description:

Target: scaffold0038; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 22 - 54
Target Start/End: Complemental strand, 47333 - 47301
Alignment:
Q  22 catgtgcaaatttgcacatgatagtaaaaccct 54  Q
    |||||||||||||||||||||||| ||||||||    
T  47333 catgtgcaaatttgcacatgatagaaaaaccct 47301  T

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Target: scaffold0009 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 8 - 40
Target Start/End: Complemental strand, 191358 - 191326
Alignment:
Q  8 tttaaacttcttaacatgtgcaaatttgcacat 40  Q
    |||||| ||||||||||||||||||||||||||    
T  191358 tttaaatttcttaacatgtgcaaatttgcacat 191326  T

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