View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF5908-Insertion-4 (Length: 720)

Name: NF5908-Insertion-4
Description: NF5908
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF5908-Insertion-4
NF5908-Insertion-4
[»] scaffold0024 (1 HSPs)
scaffold0024 (8-720)||(89546-90261)
[»] scaffold0048 (1 HSPs)
scaffold0048 (628-708)||(81841-81921)
[»] chr8 (36 HSPs)
chr8 (596-708)||(5590373-5590485)
chr8 (596-708)||(11232434-11232546)
chr8 (594-708)||(11232199-11232313)
chr8 (629-708)||(4828293-4828372)
chr8 (629-703)||(4828068-4828142)
chr8 (634-712)||(16962247-16962325)
chr8 (628-702)||(18004107-18004181)
chr8 (628-714)||(19256585-19256671)
chr8 (596-702)||(24532432-24532538)
chr8 (628-712)||(5931950-5932034)
chr8 (628-716)||(24075303-24075391)
chr8 (628-708)||(37001463-37001543)
chr8 (634-717)||(6559445-6559528)
chr8 (628-715)||(17469817-17469904)
chr8 (628-715)||(19256818-19256905)
chr8 (628-714)||(17477064-17477150)
chr8 (600-678)||(29907761-29907839)
chr8 (668-712)||(7960943-7960987)
chr8 (628-708)||(35682786-35682866)
chr8 (628-692)||(38447448-38447512)
chr8 (628-692)||(39052950-39053014)
chr8 (637-681)||(40014666-40014710)
chr8 (628-708)||(41790658-41790737)
chr8 (629-708)||(20301261-20301340)
chr8 (629-708)||(21087893-21087972)
chr8 (628-715)||(34842677-34842764)
chr8 (627-694)||(39984812-39984879)
chr8 (634-701)||(45031373-45031440)
chr8 (629-715)||(7267463-7267549)
chr8 (611-681)||(28213353-28213423)
chr8 (595-708)||(39960157-39960271)
chr8 (631-712)||(5932185-5932266)
chr8 (627-692)||(12547097-12547161)
chr8 (631-688)||(20094819-20094876)
chr8 (596-708)||(35385816-35385929)
chr8 (628-708)||(42846610-42846691)
[»] chr6 (49 HSPs)
chr6 (596-708)||(9704987-9705099)
chr6 (599-692)||(12199826-12199919)
chr6 (594-714)||(12329943-12330063)
chr6 (603-715)||(12330177-12330289)
chr6 (628-708)||(13740915-13740995)
chr6 (628-708)||(13746415-13746495)
chr6 (630-708)||(11085582-11085660)
chr6 (596-714)||(12330290-12330407)
chr6 (594-708)||(17147665-17147779)
chr6 (598-715)||(30256782-30256898)
chr6 (628-708)||(13353200-13353280)
chr6 (596-692)||(24554084-24554180)
chr6 (628-708)||(33796325-33796405)
chr6 (628-715)||(8026388-8026475)
chr6 (628-715)||(27772713-27772800)
chr6 (594-708)||(4868582-4868696)
chr6 (594-708)||(6542714-6542827)
chr6 (598-692)||(25065115-25065209)
chr6 (628-714)||(27656457-27656543)
chr6 (595-692)||(6400641-6400738)
chr6 (596-708)||(2736407-2736519)
chr6 (627-715)||(13740679-13740767)
chr6 (627-715)||(13746179-13746267)
chr6 (596-708)||(33494506-33494618)
chr6 (596-703)||(2737180-2737287)
chr6 (628-715)||(27653216-27653303)
chr6 (637-700)||(32993516-32993579)
chr6 (595-681)||(3680212-3680298)
chr6 (595-717)||(19639109-19639231)
chr6 (628-714)||(27772945-27773031)
chr6 (631-700)||(7638861-7638930)
chr6 (626-702)||(2753255-2753331)
chr6 (596-708)||(3679979-3680091)
chr6 (632-708)||(4868818-4868894)
chr6 (628-708)||(5572389-5572469)
chr6 (632-708)||(5648677-5648753)
chr6 (596-692)||(6542964-6543060)
chr6 (636-708)||(8001555-8001627)
chr6 (628-708)||(19712951-19713031)
chr6 (595-715)||(21690688-21690808)
chr6 (627-690)||(15600934-15600997)
chr6 (627-712)||(6065975-6066058)
chr6 (594-692)||(9705219-9705317)
chr6 (628-702)||(16570158-16570232)
chr6 (594-652)||(33494739-33494797)
chr6 (596-681)||(6400878-6400963)
chr6 (627-708)||(8566964-8567044)
chr6 (631-708)||(11721907-11721984)
chr6 (675-712)||(26192414-26192451)
[»] chr4 (38 HSPs)
chr4 (596-708)||(400570-400682)
chr4 (593-708)||(22231078-22231193)
chr4 (629-708)||(35796747-35796826)
chr4 (628-715)||(53814927-53815014)
chr4 (595-708)||(22231313-22231426)
chr4 (631-715)||(9685400-9685484)
chr4 (628-714)||(21498794-21498880)
chr4 (594-708)||(39902568-39902682)
chr4 (596-702)||(52559534-52559640)
chr4 (628-716)||(20821972-20822060)
chr4 (596-708)||(21684965-21685077)
chr4 (596-708)||(22845452-22845564)
chr4 (594-714)||(28245525-28245645)
chr4 (596-715)||(14783185-14783304)
chr4 (628-715)||(21498353-21498440)
chr4 (628-714)||(53814673-53814759)
chr4 (631-692)||(6218206-6218267)
chr4 (595-708)||(35788860-35788973)
chr4 (595-700)||(35796990-35797095)
chr4 (628-712)||(11036747-11036831)
chr4 (628-692)||(12869050-12869114)
chr4 (627-707)||(13611755-13611835)
chr4 (628-708)||(17111767-17111847)
chr4 (628-708)||(22863473-22863553)
chr4 (644-712)||(32002338-32002406)
chr4 (596-708)||(35788626-35788738)
chr4 (628-712)||(35819129-35819213)
chr4 (628-708)||(40717446-40717526)
chr4 (628-708)||(53828528-53828608)
chr4 (631-714)||(9685634-9685717)
chr4 (629-708)||(12869268-12869347)
chr4 (593-684)||(31254436-31254527)
chr4 (628-714)||(2261752-2261838)
chr4 (594-708)||(50543335-50543449)
chr4 (668-702)||(55330117-55330151)
chr4 (628-701)||(9279226-9279299)
chr4 (637-690)||(35609513-35609566)
chr4 (639-708)||(37836090-37836159)
[»] chr3 (39 HSPs)
chr3 (596-708)||(22729067-22729179)
chr3 (594-708)||(16239792-16239906)
chr3 (594-712)||(23708225-23708343)
chr3 (594-712)||(23726681-23726799)
chr3 (594-712)||(23745137-23745255)
chr3 (598-712)||(29575891-29576005)
chr3 (627-712)||(24063662-24063747)
chr3 (627-712)||(23691425-23691510)
chr3 (596-708)||(12930133-12930245)
chr3 (593-708)||(8142652-8142767)
chr3 (594-713)||(9273160-9273279)
chr3 (628-715)||(11589784-11589871)
chr3 (594-712)||(20327615-20327733)
chr3 (628-708)||(34610559-34610640)
chr3 (628-708)||(1723081-1723161)
chr3 (628-715)||(9272960-9273047)
chr3 (628-715)||(20327847-20327934)
chr3 (594-689)||(23691216-23691311)
chr3 (594-689)||(23708016-23708111)
chr3 (594-689)||(23726472-23726567)
chr3 (594-689)||(23744928-23745023)
chr3 (594-689)||(24063453-24063548)
chr3 (596-703)||(38791460-38791567)
chr3 (596-702)||(17001432-17001538)
chr3 (594-708)||(35038199-35038313)
chr3 (634-708)||(45828024-45828098)
chr3 (595-708)||(16239557-16239670)
chr3 (666-715)||(20303383-20303432)
chr3 (639-708)||(21717354-21717423)
chr3 (596-708)||(7697403-7697514)
chr3 (628-708)||(8018967-8019047)
chr3 (628-708)||(43781582-43781662)
chr3 (596-708)||(54567859-54567971)
chr3 (637-716)||(31556308-31556387)
chr3 (628-703)||(35038438-35038513)
chr3 (637-715)||(13574919-13574997)
chr3 (594-712)||(20303065-20303183)
chr3 (594-708)||(31317431-31317545)
chr3 (595-652)||(3975419-3975476)
[»] chr7 (46 HSPs)
chr7 (628-715)||(2544445-2544532)
chr7 (627-712)||(2401358-2401443)
chr7 (596-708)||(28080632-28080743)
chr7 (596-704)||(41190981-41191089)
chr7 (627-714)||(2544214-2544301)
chr7 (593-708)||(26239921-26240036)
chr7 (628-715)||(29469604-29469691)
chr7 (594-715)||(29469805-29469926)
chr7 (628-708)||(21054958-21055038)
chr7 (628-715)||(17202178-17202265)
chr7 (628-715)||(34027392-34027479)
chr7 (594-708)||(48243066-48243178)
chr7 (627-692)||(32278906-32278971)
chr7 (628-708)||(21861528-21861608)
chr7 (628-708)||(25620135-25620215)
chr7 (628-692)||(34027626-34027690)
chr7 (596-692)||(42985144-42985240)
chr7 (637-712)||(8075867-8075942)
chr7 (628-715)||(26562071-26562158)
chr7 (629-708)||(31892387-31892466)
chr7 (596-702)||(3038095-3038201)
chr7 (594-707)||(1596793-1596906)
chr7 (595-708)||(3392948-3393061)
chr7 (639-708)||(33996316-33996385)
chr7 (595-692)||(36277247-36277344)
chr7 (627-712)||(5522877-5522964)
chr7 (627-707)||(9625411-9625491)
chr7 (628-708)||(21861293-21861373)
chr7 (627-715)||(31257265-31257353)
chr7 (628-708)||(31485664-31485744)
chr7 (628-692)||(48243458-48243522)
chr7 (633-680)||(4507169-4507216)
chr7 (628-715)||(40746264-40746351)
chr7 (637-712)||(40898716-40898791)
chr7 (637-708)||(43085542-43085613)
chr7 (597-708)||(44874351-44874462)
chr7 (596-715)||(48661553-48661672)
chr7 (594-656)||(6001492-6001554)
chr7 (594-656)||(36277048-36277110)
chr7 (637-686)||(10420880-10420928)
chr7 (631-692)||(23839098-23839159)
chr7 (627-692)||(31257052-31257117)
chr7 (628-709)||(31485429-31485509)
chr7 (596-681)||(31892118-31892203)
chr7 (631-708)||(47710445-47710522)
chr7 (631-708)||(47722101-47722178)
[»] chr5 (32 HSPs)
chr5 (628-715)||(21209919-21210006)
chr5 (594-702)||(95277-95385)
chr5 (627-715)||(24487643-24487731)
chr5 (596-708)||(2063739-2063850)
chr5 (596-712)||(6919430-6919544)
chr5 (628-712)||(33337239-33337323)
chr5 (612-692)||(38731859-38731939)
chr5 (628-715)||(8098317-8098403)
chr5 (594-705)||(18333473-18333584)
chr5 (594-708)||(41666762-41666876)
chr5 (595-708)||(19705869-19705982)
chr5 (628-717)||(27132989-27133078)
chr5 (628-708)||(41666998-41667078)
chr5 (596-715)||(6413655-6413773)
chr5 (629-708)||(9368830-9368909)
chr5 (627-702)||(24528538-24528613)
chr5 (594-692)||(17352456-17352553)
chr5 (594-708)||(24346506-24346620)
chr5 (631-693)||(25258321-25258383)
chr5 (631-693)||(25322111-25322173)
chr5 (594-708)||(15480522-15480638)
chr5 (630-702)||(7607595-7607667)
chr5 (598-714)||(8287771-8287886)
chr5 (596-708)||(9368562-9368674)
chr5 (628-712)||(24270107-24270190)
chr5 (596-712)||(24346738-24346854)
chr5 (628-708)||(24531598-24531678)
chr5 (628-690)||(2061961-2062023)
chr5 (629-699)||(13700603-13700673)
chr5 (594-708)||(24269876-24269989)
chr5 (672-705)||(9682324-9682357)
chr5 (627-708)||(15480320-15480401)
[»] chr2 (41 HSPs)
chr2 (594-708)||(16419467-16419581)
chr2 (594-715)||(2324205-2324326)
chr2 (597-712)||(36352160-36352275)
chr2 (628-717)||(19191606-19191695)
chr2 (628-692)||(16533546-16533610)
chr2 (596-712)||(37840304-37840420)
chr2 (594-717)||(17854688-17854811)
chr2 (594-708)||(2029969-2030083)
chr2 (594-708)||(5711444-5711558)
chr2 (594-708)||(5711680-5711794)
chr2 (594-708)||(25082542-25082656)
chr2 (628-714)||(36316050-36316136)
chr2 (630-715)||(5509314-5509399)
chr2 (629-714)||(37769942-37770027)
chr2 (596-708)||(2029736-2029848)
chr2 (628-708)||(14466415-14466495)
chr2 (628-708)||(27897611-27897690)
chr2 (594-702)||(40149014-40149122)
chr2 (628-702)||(5851692-5851767)
chr2 (593-712)||(15124549-15124668)
chr2 (596-690)||(17525361-17525455)
chr2 (594-692)||(24396065-24396163)
chr2 (594-680)||(37812301-37812387)
chr2 (594-708)||(40379214-40379328)
chr2 (600-717)||(14927073-14927190)
chr2 (667-708)||(30701130-30701171)
chr2 (595-680)||(37812531-37812616)
chr2 (628-692)||(2324473-2324537)
chr2 (596-656)||(4662198-4662258)
chr2 (634-690)||(5206703-5206759)
chr2 (628-708)||(17719399-17719479)
chr2 (628-692)||(32884106-32884170)
chr2 (628-708)||(40379449-40379529)
chr2 (596-692)||(42639635-42639731)
chr2 (637-692)||(15124804-15124859)
chr2 (636-703)||(45295948-45296014)
chr2 (627-708)||(21591779-21591861)
chr2 (598-715)||(5509048-5509165)
chr2 (590-715)||(17854927-17855052)
chr2 (631-708)||(28407798-28407875)
chr2 (596-681)||(40149260-40149343)
[»] scaffold0519 (2 HSPs)
scaffold0519 (596-708)||(1883-1995)
scaffold0519 (594-708)||(2116-2230)
[»] chr1 (39 HSPs)
chr1 (627-715)||(3169764-3169852)
chr1 (596-712)||(11924888-11925004)
chr1 (594-717)||(25145481-25145604)
chr1 (596-703)||(26173466-26173573)
chr1 (594-692)||(38668325-38668423)
chr1 (594-692)||(38733347-38733445)
chr1 (595-708)||(4098168-4098281)
chr1 (611-708)||(40079134-40079231)
chr1 (628-708)||(4113011-4113091)
chr1 (596-708)||(15986338-15986450)
chr1 (596-692)||(17452849-17452945)
chr1 (627-715)||(51588990-51589078)
chr1 (627-714)||(12244962-12245048)
chr1 (594-708)||(35772229-35772343)
chr1 (595-708)||(4098408-4098520)
chr1 (594-712)||(16163132-16163252)
chr1 (627-708)||(38733150-38733230)
chr1 (594-715)||(51589191-51589312)
chr1 (628-708)||(2859397-2859477)
chr1 (596-692)||(2859648-2859744)
chr1 (628-708)||(17452684-17452764)
chr1 (628-692)||(27413581-27413645)
chr1 (596-708)||(30369802-30369914)
chr1 (596-700)||(41035840-41035944)
chr1 (596-708)||(43409774-43409885)
chr1 (627-715)||(51589804-51589892)
chr1 (594-702)||(52961547-52961655)
chr1 (612-691)||(9499229-9499307)
chr1 (637-680)||(12376470-12376513)
chr1 (639-690)||(39544406-39544457)
chr1 (637-708)||(40316055-40316126)
chr1 (637-708)||(51460447-51460518)
chr1 (626-708)||(8870915-8870997)
chr1 (628-714)||(25137302-25137388)
chr1 (594-692)||(35892256-35892354)
chr1 (630-708)||(52650776-52650854)
chr1 (637-678)||(12325331-12325372)
chr1 (595-692)||(25713359-25713456)
chr1 (627-688)||(28408067-28408128)
[»] scaffold0766 (1 HSPs)
scaffold0766 (594-708)||(6239-6353)
[»] scaffold0129 (1 HSPs)
scaffold0129 (627-703)||(14301-14377)
[»] scaffold0692 (2 HSPs)
scaffold0692 (597-708)||(5759-5870)
scaffold0692 (629-708)||(5549-5628)
[»] scaffold0481 (1 HSPs)
scaffold0481 (629-692)||(3492-3555)
[»] scaffold0092 (1 HSPs)
scaffold0092 (629-700)||(5890-5961)
[»] scaffold0047 (1 HSPs)
scaffold0047 (629-712)||(12647-12730)
[»] scaffold0005 (1 HSPs)
scaffold0005 (596-715)||(56426-56545)
[»] scaffold0334 (1 HSPs)
scaffold0334 (628-692)||(4450-4514)
[»] scaffold0083 (1 HSPs)
scaffold0083 (629-692)||(51236-51299)
[»] scaffold0041 (1 HSPs)
scaffold0041 (637-712)||(67493-67568)


Alignment Details
Target: scaffold0024 (Bit Score: 650; Significance: 0; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 650; E-Value: 0
Query Start/End: Original strand, 8 - 720
Target Start/End: Complemental strand, 90261 - 89546
Alignment:
Q  8 aaaatttatcaattattttcatttttaaatccctatcaagtgtctttaactctaataaaatgagtgttagactgagttgtgttaacacttattttaaatg 107  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  90261 aaaatttatcaattattttcatttttaaatccctatcaagtgcctttaactctaataaaatgagtgttagactgagttgtgttaacacttattttaaatg 90162  T
Q  108 tttgattcattcaacacaatactgctcacgtaatgattcactgccaaacaaacaacacagtaactcattgaacaaaatgaaaaacaatgactttctgtgc 207  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  90161 tttgattcattcaacacaatactgctcacgtaatgattcactgccaaacaaacaacacagtaactcattgaacaaaatgaaaaacaatgactttctgtgc 90062  T
Q  208 tgttgacaaatgcaagtaatgagagggatcaaagtgtcacctaataaccaatctaattattaagagcaataaacagtgtcatacaccaccaaaatctgta 307  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  90061 tgttgacaaatgcaagcaatgagagggatcaaagtgtcacctaataaccaatctaattattaagagcaataaacggtgtcatacaccaccaaaatctgta 89962  T
Q  308 ---tactgtaaactccacgaccatcatgaacactgatctattttcattggccttgcatgtgaagtgcatgtgattctcaaatttagaaaaaagattaaaa 404  Q
       |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||    
T  89961 gtatactgtaaactccacgaccatcatgaacactgatctattttcattggccttgtatgtgaagtgcatgtgattctcaaatttagaaaaaagactaaaa 89862  T
Q  405 taaagtttgtaaaaggtggcagtccataaaattcatgttgccaactaaccatccaataggcattttctttatccattgttgtttgaattctcattattgt 504  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  89861 taaagtttgtaaaaggtggcagtccataaaattcatgttgccaactaaccatccaataggcattttctttatccattgttgtttgaattctcattattgt 89762  T
Q  505 tcatatagagtttttaagaaaccaaaaaatattaaattaagataaatagctaggtacaggtacataactttgaataaatgaaagaataatgtgttaagag 604  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  89761 tcatatagagtttttaagaaaccaaaaaatattaaattaagataaatagctaggtacaggtacataactttgaataaatgaaagaataatgtgttaagag 89662  T
Q  605 tcacagatcggatatgatataatctgacaatatgtttataagtggggacaatattcactttacaagtcggttttgtgaggttgtgttaagtccaaccaca 704  Q
    || | ||||||||| ||||| |||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||    
T  89661 tccccgatcggataagatatgatctgataatatgtttataagtggggacaatattcaccttacaagtcggttttgtgaggttgtgttaggtccaaccaca 89562  T
Q  705 atttttaatataatgt 720  Q
    |||||||| |||||||    
T  89561 atttttaagataatgt 89546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0048 (Bit Score: 57; Significance: 2e-23; HSPs: 1)
Name: scaffold0048
Description:

Target: scaffold0048; HSP #1
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 628 - 708
Target Start/End: Original strand, 81841 - 81921
Alignment:
Q  628 ctgacaatatgtttataagtggggacaatattcactttacaagtcggttttgtgaggttgtgttaagtccaaccacaattt 708  Q
    ||||||||||||||||||||||||||||| ||||| |||||||||||||||||| |||||||||| | |||||||| ||||    
T  81841 ctgacaatatgtttataagtggggacaattttcaccttacaagtcggttttgtggggttgtgttaggcccaaccacgattt 81921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 49; Significance: 1e-18; HSPs: 36)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 596 - 708
Target Start/End: Complemental strand, 5590485 - 5590373
Alignment:
Q  596 tgttaagagtcacagatcggatatgatataatctgacaatatgtttataagtggggacaatattcactttacaagtcggttttgtgaggttgtgttaagt 695  Q
    |||| |||||| || |||||||| || ||  ||||||||| |||||| |||||||| ||||  |||||| ||||| ||||||||||||||||||||| |     
T  5590485 tgttcagagtcccacatcggataggagatggtctgacaatgtgtttacaagtgggggcaatcctcacttcacaagccggttttgtgaggttgtgttaggc 5590386  T
Q  696 ccaaccacaattt 708  Q
    |||||||||||||    
T  5590385 ccaaccacaattt 5590373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 596 - 708
Target Start/End: Complemental strand, 11232546 - 11232434
Alignment:
Q  596 tgttaagagtcacagatcggatatgatataatctgacaatatgtttataagtggggacaatattcactttacaagtcggttttgtgaggttgtgttaagt 695  Q
    ||||||||||| || |||||| | || ||  ||||||||| ||||||||||||||| ||||  |||| ||||||| |||||||||| |||||||||| |     
T  11232546 tgttaagagtcccacatcggacaggacatggtctgacaatgtgtttataagtgggggcaatcctcaccttacaagccggttttgtggggttgtgttaggc 11232447  T
Q  696 ccaaccacaattt 708  Q
    |||||||| ||||    
T  11232446 ccaaccaccattt 11232434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 594 - 708
Target Start/End: Complemental strand, 11232313 - 11232199
Alignment:
Q  594 tgtgttaagagtcacagatcggatatgatataatctgacaatatgtttataagtggggacaatattcactttacaagtcggttttgtgaggttgtgttaa 693  Q
    ||||||||||||| || |||||| | || ||   |||||||| ||||||||||||||| ||||  |||| ||||||| |||||||||| ||||||||||     
T  11232313 tgtgttaagagtcccacatcggacaggacatggcctgacaatgtgtttataagtgggggcaatcctcaccttacaagccggttttgtggggttgtgttag 11232214  T
Q  694 gtccaaccacaattt 708  Q
    | |||||||| ||||    
T  11232213 gcccaaccaccattt 11232199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 629 - 708
Target Start/End: Original strand, 4828293 - 4828372
Alignment:
Q  629 tgacaatatgtttataagtggggacaatattcactttacaagtcggttttgtgaggttgtgttaagtccaaccacaattt 708  Q
    ||||||| ||||||||||||||| ||||  |||| | ||||| |||||||||| |||||||||| | |||||||||||||    
T  4828293 tgacaatttgtttataagtgggggcaatcctcacctcacaagccggttttgtggggttgtgttaggcccaaccacaattt 4828372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 629 - 703
Target Start/End: Original strand, 4828068 - 4828142
Alignment:
Q  629 tgacaatatgtttataagtggggacaatattcactttacaagtcggttttgtgaggttgtgttaagtccaaccac 703  Q
    ||||||| ||||||||||||||||||||  |||| | ||||| |||||||||| |||||||||| | ||||||||    
T  4828068 tgacaatttgtttataagtggggacaatcctcacctcacaagccggttttgtggggttgtgttaggcccaaccac 4828142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 634 - 712
Target Start/End: Complemental strand, 16962325 - 16962247
Alignment:
Q  634 atatgtttataagtggggacaatattcactttacaagtcggttttgtgaggttgtgttaagtccaaccacaatttttaa 712  Q
    ||||||||||||||||| |||||  |||| | ||||  |||||||||| | |||||||| |||||||||||||||||||    
T  16962325 atatgtttataagtgggaacaattctcacctcacaaaccggttttgtgggattgtgttaggtccaaccacaatttttaa 16962247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 628 - 702
Target Start/End: Complemental strand, 18004181 - 18004107
Alignment:
Q  628 ctgacaatatgtttataagtggggacaatattcactttacaagtcggttttgtgaggttgtgttaagtccaacca 702  Q
    |||||||||||||||||||||||| ||||  ||||   | ||||||||||||||||||||||||| | |||||||    
T  18004181 ctgacaatatgtttataagtgggggcaatcctcaccccataagtcggttttgtgaggttgtgttaggcccaacca 18004107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 628 - 714
Target Start/End: Complemental strand, 19256671 - 19256585
Alignment:
Q  628 ctgacaatatgtttataagtggggacaatattcactttacaagtcggttttgtgaggttgtgttaagtccaaccacaatttttaata 714  Q
    |||||||| ||||||||||||||| ||||  |||| | ||||| |||||||||| |||||||||| | |||||||| |||| |||||    
T  19256671 ctgacaatttgtttataagtgggggcaatcctcacctcacaagccggttttgtggggttgtgttaggcccaaccacgatttctaata 19256585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 596 - 702
Target Start/End: Complemental strand, 24532538 - 24532432
Alignment:
Q  596 tgttaagagtcacagatcggatatgatataatctgacaatatgtttataagtggggacaatattcactttacaagtcggttttgtgaggttgtgttaagt 695  Q
    ||||||||||| || |||||||| || ||   |||||||| ||||||||||||||| ||||  |||| | ||||| |||||||||| |||||||||| |     
T  24532538 tgttaagagtcccacatcggataggagatggcctgacaatgtgtttataagtgggggcaatcatcacctcacaagccggttttgtggggttgtgttaggc 24532439  T
Q  696 ccaacca 702  Q
    |||||||    
T  24532438 ccaacca 24532432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 628 - 712
Target Start/End: Complemental strand, 5932034 - 5931950
Alignment:
Q  628 ctgacaatatgtttataagtggggacaatattcactttacaagtcggttttgtgaggttgtgttaagtccaaccacaatttttaa 712  Q
    |||||||| ||||||||||||||| ||||  |||| | ||||| |||||||||| |||| ||||| | |||||||| ||||||||    
T  5932034 ctgacaatgtgtttataagtgggggcaatcctcacctcacaagccggttttgtggggttatgttaggcccaaccaccatttttaa 5931950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 628 - 716
Target Start/End: Complemental strand, 24075391 - 24075303
Alignment:
Q  628 ctgacaatatgtttataagtggggacaatattcactttacaagtcggttttgtgaggttgtgttaagtccaaccacaatttttaatata 716  Q
    |||||| | ||||||||||||||| ||||  |||| | ||||| |||||||||| |||||||||| | |||||||| |||| |||||||    
T  24075391 ctgacactttgtttataagtgggggcaatcctcacctcacaagccggttttgtggggttgtgttaggcccaaccacgatttctaatata 24075303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 628 - 708
Target Start/End: Original strand, 37001463 - 37001543
Alignment:
Q  628 ctgacaatatgtttataagtggggacaatattcactttacaagtcggttttgtgaggttgtgttaagtccaaccacaattt 708  Q
    |||||||  ||||||||||||||||||||  |||| | ||||| |||||||||| |||||||||| | |||||||| ||||    
T  37001463 ctgacaaagtgtttataagtggggacaatcctcacatcacaagccggttttgtggggttgtgttaggcccaaccacgattt 37001543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 634 - 717
Target Start/End: Complemental strand, 6559528 - 6559445
Alignment:
Q  634 atatgtttataagtggggacaatattcactttacaagtcggttttgtgaggttgtgttaagtccaaccacaatttttaatataa 717  Q
    |||||||||||||||||| ||||  |||| ||||||| ||||||||||||||| ||||    |||||||||| |||||| ||||    
T  6559528 atatgtttataagtgggggcaatcctcaccttacaagccggttttgtgaggttatgttcgtcccaaccacaaattttaagataa 6559445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 628 - 715
Target Start/End: Original strand, 17469817 - 17469904
Alignment:
Q  628 ctgacaatatgtttataagtggggacaatattcactttacaagtcggttttgtgaggttgtgttaagtccaaccacaatttttaatat 715  Q
    |||||||| ||||||||||||||| ||||  |||| | ||||| |||||||||| |||||||||| |  ||||||| |||| ||||||    
T  17469817 ctgacaatttgtttataagtgggggcaatcctcacctcacaagccggttttgtggggttgtgttaggctcaaccacgatttctaatat 17469904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 628 - 715
Target Start/End: Complemental strand, 19256905 - 19256818
Alignment:
Q  628 ctgacaatatgtttataagtggggacaatattcactttacaagtcggttttgtgaggttgtgttaagtccaaccacaatttttaatat 715  Q
    |||||||| ||||||||||||||| ||||  |||| | |||||  ||||||||| |||||||||| | |||||||| |||| ||||||    
T  19256905 ctgacaatttgtttataagtgggggcaatcctcacctcacaagcaggttttgtggggttgtgttaggcccaaccacgatttctaatat 19256818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 628 - 714
Target Start/End: Original strand, 17477064 - 17477150
Alignment:
Q  628 ctgacaatatgtttataagtggggacaatattcactttacaagtcggttttgtgaggttgtgttaagtccaaccacaatttttaata 714  Q
    |||||||| ||||||||||||||| ||||  |||| | ||||| |||||||||| |||||||||| |  ||||||| |||| |||||    
T  17477064 ctgacaatttgtttataagtgggggcaatcctcacctcacaagccggttttgtggggttgtgttaggctcaaccacgatttctaata 17477150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 600 - 678
Target Start/End: Complemental strand, 29907839 - 29907761
Alignment:
Q  600 aagagtcacagatcggatatgatataatctgacaatatgtttataagtggggacaatattcactttacaagtcggtttt 678  Q
    ||||||| || |||||||| || ||| ||||||||| ||||||||||||||| ||||  |||| | |||||||||||||    
T  29907839 aagagtcccacatcggataagagatagtctgacaatgtgtttataagtggggtcaatcctcacctcacaagtcggtttt 29907761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 668 - 712
Target Start/End: Original strand, 7960943 - 7960987
Alignment:
Q  668 aagtcggttttgtgaggttgtgttaagtccaaccacaatttttaa 712  Q
    |||||||||||| | ||||| ||||||||||||||||||||||||    
T  7960943 aagtcggttttgcggggttgcgttaagtccaaccacaatttttaa 7960987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 628 - 708
Target Start/End: Complemental strand, 35682866 - 35682786
Alignment:
Q  628 ctgacaatatgtttataagtggggacaatattcactttacaagtcggttttgtgaggttgtgttaagtccaaccacaattt 708  Q
    |||||||| ||||||||||||||| ||||  |||| |  |||| |||||||||| |||||||||| | |||||||| ||||    
T  35682866 ctgacaatgtgtttataagtgggggcaatcctcacctcgcaagccggttttgtggggttgtgttaggcccaaccacgattt 35682786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 628 - 692
Target Start/End: Complemental strand, 38447512 - 38447448
Alignment:
Q  628 ctgacaatatgtttataagtggggacaatattcactttacaagtcggttttgtgaggttgtgtta 692  Q
    |||||||| ||||||||||||||| ||||  |||| | ||||| |||||||||| ||||||||||    
T  38447512 ctgacaatgtgtttataagtgggggcaatcctcacctcacaagccggttttgtggggttgtgtta 38447448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 628 - 692
Target Start/End: Complemental strand, 39053014 - 39052950
Alignment:
Q  628 ctgacaatatgtttataagtggggacaatattcactttacaagtcggttttgtgaggttgtgtta 692  Q
    |||||||| ||||||||||||||| ||||  |||| | ||||| |||||||||| ||||||||||    
T  39053014 ctgacaatgtgtttataagtgggggcaatcctcacctcacaagccggttttgtggggttgtgtta 39052950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 637 - 681
Target Start/End: Original strand, 40014666 - 40014710
Alignment:
Q  637 tgtttataagtggggacaatattcactttacaagtcggttttgtg 681  Q
    ||||||||||||||| |||| ||||||| ||||||||||||||||    
T  40014666 tgtttataagtgggggcaatcttcacttcacaagtcggttttgtg 40014710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 628 - 708
Target Start/End: Original strand, 41790658 - 41790737
Alignment:
Q  628 ctgacaatatgtttataagtggggacaatattcactttacaagtcggttttgtgaggttgtgttaagtccaaccacaattt 708  Q
    |||||||| ||||||||||||||||||||  |||| | | ||| |||||||||| |||||||||| | |||||||| ||||    
T  41790658 ctgacaatgtgtttataagtggggacaatcctcacctcataagccggttttgtg-ggttgtgttaggcccaaccacgattt 41790737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 629 - 708
Target Start/End: Original strand, 20301261 - 20301340
Alignment:
Q  629 tgacaatatgtttataagtggggacaatattcactttacaagtcggttttgtgaggttgtgttaagtccaaccacaattt 708  Q
    ||||||| ||||||||||||||| ||||  | || | ||||| | ||||||||||||||||||| | |||||||| ||||    
T  20301261 tgacaatgtgtttataagtgggggcaatcctaacctcacaagcccgttttgtgaggttgtgttaggcccaaccacgattt 20301340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 629 - 708
Target Start/End: Original strand, 21087893 - 21087972
Alignment:
Q  629 tgacaatatgtttataagtggggacaatattcactttacaagtcggttttgtgaggttgtgttaagtccaaccacaattt 708  Q
    ||||||| ||||||||||||||| ||||  | || | ||||| | ||||||||||||||||||| | |||||||| ||||    
T  21087893 tgacaatgtgtttataagtgggggcaatcctaacctcacaagcccgttttgtgaggttgtgttaggcccaaccacgattt 21087972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 628 - 715
Target Start/End: Original strand, 34842677 - 34842764
Alignment:
Q  628 ctgacaatatgtttataagtggggacaatattcactttacaagtcggttttgtgaggttgtgttaagtccaaccacaatttttaatat 715  Q
    |||||||| ||||||||||||||| ||||  |||| | | | |||||||||||| |||||||||| |  ||||||| |||| ||||||    
T  34842677 ctgacaatttgtttataagtgggggcaatcctcacctcataggtcggttttgtggggttgtgttaggctcaaccacgatttctaatat 34842764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 627 - 694
Target Start/End: Original strand, 39984812 - 39984879
Alignment:
Q  627 tctgacaatatgtttataagtggggacaatattcactttacaagtcggttttgtgaggttgtgttaag 694  Q
    ||||||||| ||||||||||||||| ||||  |||| | ||||| | |||||||| ||||||||||||    
T  39984812 tctgacaatttgtttataagtgggggcaatcctcacctcacaagccagttttgtggggttgtgttaag 39984879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 634 - 701
Target Start/End: Complemental strand, 45031440 - 45031373
Alignment:
Q  634 atatgtttataagtggggacaatattcactttacaagtcggttttgtgaggttgtgttaagtccaacc 701  Q
    |||||||||||||| ||| ||||  |||| ||||||| ||||||||| ||||||||||| | ||||||    
T  45031440 atatgtttataagtcggggcaatcctcaccttacaagccggttttgtaaggttgtgttaggcccaacc 45031373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 629 - 715
Target Start/End: Complemental strand, 7267549 - 7267463
Alignment:
Q  629 tgacaatatgtttataagtggggacaatattcactttacaagtcggttttgtgaggttgtgttaagtccaaccacaatttttaatat 715  Q
    ||||||| ||||||||||||||| ||||  |||| | ||||| |||||||||  ||||||||||   |||||||| |||| ||||||    
T  7267549 tgacaatttgtttataagtgggggcaatcatcacctcacaagccggttttgtagggttgtgttagacccaaccaccatttctaatat 7267463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 611 - 681
Target Start/End: Complemental strand, 28213423 - 28213353
Alignment:
Q  611 atcggatatgatataatctgacaatatgtttataagtggggacaatattcactttacaagtcggttttgtg 681  Q
    |||||||| || ||| ||||||||| | |||||||||||||||| |  |||| | ||||||||||||||||    
T  28213423 atcggataagagatagtctgacaatgtatttataagtggggacatttctcacctcacaagtcggttttgtg 28213353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 595 - 708
Target Start/End: Original strand, 39960157 - 39960271
Alignment:
Q  595 gtgttaagagtcacagatcggatatgatataatctgacaatatgtttataagt-ggggacaatattcactttacaagtcggttttgtgaggttgtgttaa 693  Q
    |||||||||||| || |||||||| || ||   |||| ||| ||||||||||| |||| ||||  |||| | ||||| |||||||||| ||||||||||     
T  39960157 gtgttaagagtcccacatcggataggagatggcctgaaaatttgtttataagtggggggcaatcctcacctcacaagccggttttgtggggttgtgttag 39960256  T
Q  694 gtccaaccacaattt 708  Q
    | |||||||| ||||    
T  39960257 gcccaaccacgattt 39960271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 631 - 712
Target Start/End: Complemental strand, 5932266 - 5932185
Alignment:
Q  631 acaatatgtttataagtggggacaatattcactttacaagtcggttttgtgaggttgtgttaagtccaaccacaatttttaa 712  Q
    ||||| ||||||||||||||| |||   |||| | ||||| | |||||||| |||||||||| | |||||||| ||||||||    
T  5932266 acaatgtgtttataagtgggggcaagcctcacctcacaagcctgttttgtggggttgtgttaggcccaaccaccatttttaa 5932185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 627 - 692
Target Start/End: Original strand, 12547097 - 12547161
Alignment:
Q  627 tctgacaatatgtttataagtggggacaatattcactttacaagtcggttttgtgaggttgtgtta 692  Q
    ||||||||| | ||||||||||||| |||| ||||| | ||||| |||||||||| ||||||||||    
T  12547097 tctgacaatttatttataagtgggg-caatcttcacctcacaagccggttttgtggggttgtgtta 12547161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 631 - 688
Target Start/End: Complemental strand, 20094876 - 20094819
Alignment:
Q  631 acaatatgtttataagtggggacaatattcactttacaagtcggttttgtgaggttgt 688  Q
    |||||||||||||| |||||| ||||  |||| ||||||| |||||||||| ||||||    
T  20094876 acaatatgtttatatgtgggggcaatcctcaccttacaagccggttttgtggggttgt 20094819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 596 - 708
Target Start/End: Complemental strand, 35385929 - 35385816
Alignment:
Q  596 tgttaagagtcacagatcggatatgatataatctgacaatatgtttataagt-ggggacaatattcactttacaagtcggttttgtgaggttgtgttaag 694  Q
    ||||||||||| || ||||||||  | |||  |||| ||||||||||||||| |||| ||||  |||| | | ||| |||||||||| ||||||||||||    
T  35385929 tgttaagagtcccacatcggatagaagatagcctgataatatgtttataagtggggggcaatcctcacctcataagccggttttgtggggttgtgttaag 35385830  T
Q  695 tccaaccacaattt 708  Q
      ||||||| ||||    
T  35385829 ctcaaccaccattt 35385816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 628 - 708
Target Start/End: Complemental strand, 42846691 - 42846610
Alignment:
Q  628 ctgacaatatgtttataagtgg-ggacaatattcactttacaagtcggttttgtgaggttgtgttaagtccaaccacaattt 708  Q
    |||||||| ||||||||||||| || ||||  |||| | ||||| |||||||||| |||||||||| | |||||||| ||||    
T  42846691 ctgacaatttgtttataagtggagggcaatcctcacctcacaagccggttttgtggggttgtgttaggcccaaccacgattt 42846610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 49; Significance: 1e-18; HSPs: 49)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 596 - 708
Target Start/End: Original strand, 9704987 - 9705099
Alignment:
Q  596 tgttaagagtcacagatcggatatgatataatctgacaatatgtttataagtggggacaatattcactttacaagtcggttttgtgaggttgtgttaagt 695  Q
    ||||||||||| || |||||||| || |||  |||||||| ||||||||||||||| ||||  |||| | |||||||||||||||| |||||||||| |     
T  9704987 tgttaagagtctcacatcggataggacatagcctgacaatgtgtttataagtgggggcaatcatcacctcacaagtcggttttgtggggttgtgttaggc 9705086  T
Q  696 ccaaccacaattt 708  Q
    |||||||| ||||    
T  9705087 ccaaccaccattt 9705099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 599 - 692
Target Start/End: Complemental strand, 12199919 - 12199826
Alignment:
Q  599 taagagtcacagatcggatatgatataatctgacaatatgtttataagtggggacaatattcactttacaagtcggttttgtgaggttgtgtta 692  Q
    |||||||| || |||||||| |||||  ||||||||||||||||||||||||| ||||  |||| | ||||||| ||||||||| |||||||||    
T  12199919 taagagtcccacatcggataagatatggtctgacaatatgtttataagtgggggcaatcatcacctcacaagtccgttttgtgatgttgtgtta 12199826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 594 - 714
Target Start/End: Complemental strand, 12330063 - 12329943
Alignment:
Q  594 tgtgttaagagtcacagatcggatatgatataatctgacaatatgtttataagtggggacaatattcactttacaagtcggttttgtgaggttgtgttaa 693  Q
    ||||||||||||| || |||||||| ||||| || | ||||| ||||||||||||||| ||||  |||| | |||||  | ||||||||||||||||||     
T  12330063 tgtgttaagagtcccacatcggataagatatgatataacaatgtgtttataagtgggggcaatcctcacctcacaagctgattttgtgaggttgtgttag 12329964  T
Q  694 gtccaaccacaatttttaata 714  Q
    | |||||||| |||| |||||    
T  12329963 gcccaaccacgatttgtaata 12329943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 603 - 715
Target Start/End: Complemental strand, 12330289 - 12330177
Alignment:
Q  603 agtcacagatcggatatgatataatctgacaatatgtttataagtggggacaatattcactttacaagtcggttttgtgaggttgtgttaagtccaacca 702  Q
    |||| ||||||||||| || ||  ||||||||| ||||||||||||||| |||   |||| | ||||| ||||||||||||||||||||| | |||||||    
T  12330289 agtcccagatcggataggacatggtctgacaatgtgtttataagtgggggcaaccctcacctcacaagccggttttgtgaggttgtgttaggcccaacca 12330190  T
Q  703 caatttttaatat 715  Q
    | |||| ||||||    
T  12330189 cgatttctaatat 12330177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 628 - 708
Target Start/End: Original strand, 13740915 - 13740995
Alignment:
Q  628 ctgacaatatgtttataagtggggacaatattcactttacaagtcggttttgtgaggttgtgttaagtccaaccacaattt 708  Q
    |||||||| ||||||||||||||  ||||  |||||| |||||||||||||||| |||||||||| | |||||||||||||    
T  13740915 ctgacaatttgtttataagtgggagcaatcctcacttcacaagtcggttttgtggggttgtgttaggcccaaccacaattt 13740995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 628 - 708
Target Start/End: Original strand, 13746415 - 13746495
Alignment:
Q  628 ctgacaatatgtttataagtggggacaatattcactttacaagtcggttttgtgaggttgtgttaagtccaaccacaattt 708  Q
    |||||||| ||||||||||||||  ||||  |||||| |||||||||||||||| |||||||||| | |||||||||||||    
T  13746415 ctgacaatttgtttataagtgggagcaatcctcacttcacaagtcggttttgtggggttgtgttaggcccaaccacaattt 13746495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 630 - 708
Target Start/End: Original strand, 11085582 - 11085660
Alignment:
Q  630 gacaatatgtttataagtggggacaatattcactttacaagtcggttttgtgaggttgtgttaagtccaaccacaattt 708  Q
    |||||||||||||||||||||| ||||  |||||| ||||| |||||||||| |||||||||| |||||| ||| ||||    
T  11085582 gacaatatgtttataagtgggggcaattctcacttcacaagccggttttgtgcggttgtgttaggtccaatcacgattt 11085660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 596 - 714
Target Start/End: Complemental strand, 12330407 - 12330290
Alignment:
Q  596 tgttaagagtcacagatcggatatgatataatctgacaatatgtttataagtggggacaatattcactttacaagtcggttttgtgaggttgtgttaagt 695  Q
    ||||||||||| || |||||||| || ||  ||||||||| ||||||||||||||| ||||  |||  | ||||| ||||||||||||||||||||| |     
T  12330407 tgttaagagtcccacatcggataggacatggtctgacaatgtgtttataagtgggg-caatcctcatctcacaagccggttttgtgaggttgtgttaggc 12330309  T
Q  696 ccaaccacaatttttaata 714  Q
    |||||||| |||| |||||    
T  12330308 ccaaccacgatttctaata 12330290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 594 - 708
Target Start/End: Complemental strand, 17147779 - 17147665
Alignment:
Q  594 tgtgttaagagtcacagatcggatatgatataatctgacaatatgtttataagtggggacaatattcactttacaagtcggttttgtgaggttgtgttaa 693  Q
    ||||||||||||| || |||||||| || || | |||||||| | ||||||||||||| ||||  |||| | ||||| |||||||||| |||| |||||     
T  17147779 tgtgttaagagtcccacatcggataggacatgacctgacaatgtatttataagtgggggcaatcctcacctcacaagccggttttgtggggttatgttag 17147680  T
Q  694 gtccaaccacaattt 708  Q
    |||||||||| ||||    
T  17147679 gtccaaccaccattt 17147665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 598 - 715
Target Start/End: Original strand, 30256782 - 30256898
Alignment:
Q  598 ttaagagtcacagatcggatatgatataatctgacaatatgtttataagtggggacaatattcactttacaagtcggttttgtgaggttgtgttaagtcc 697  Q
    ||||||||| || |||||||| |  || | |||||||||||||||||||||||| ||||  |||| | ||||| |||||||||| |||||||||| | ||    
T  30256782 ttaagagtcccacatcggataggtgatgacctgacaatatgtttataagtgggg-caatcctcacctcacaagccggttttgtggggttgtgttaggccc 30256880  T
Q  698 aaccacaatttttaatat 715  Q
    |||||| |||| ||||||    
T  30256881 aaccacgatttctaatat 30256898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 628 - 708
Target Start/End: Original strand, 13353200 - 13353280
Alignment:
Q  628 ctgacaatatgtttataagtggggacaatattcactttacaagtcggttttgtgaggttgtgttaagtccaaccacaattt 708  Q
    |||||||| ||||||||||||||| ||||  |||| ||||||| |||||||||| |||||||||| | |||||||| ||||    
T  13353200 ctgacaatgtgtttataagtgggggcaatcctcaccttacaagccggttttgtggggttgtgttaggcccaaccaccattt 13353280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 596 - 692
Target Start/End: Original strand, 24554084 - 24554180
Alignment:
Q  596 tgttaagagtcacagatcggatatgatataatctgacaatatgtttataagtggggacaatattcactttacaagtcggttttgtgaggttgtgtta 692  Q
    ||||||||||| || |||||||| || ||  ||||||||||| ||||||||||||| |||| ||||| | ||||| ||||||||||  |||||||||    
T  24554084 tgttaagagtcccacatcggataggagatggtctgacaatatatttataagtgggggcaatcttcacctcacaagccggttttgtggagttgtgtta 24554180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 628 - 708
Target Start/End: Original strand, 33796325 - 33796405
Alignment:
Q  628 ctgacaatatgtttataagtggggacaatattcactttacaagtcggttttgtgaggttgtgttaagtccaaccacaattt 708  Q
    |||||||| ||||||||||||||| ||||  |||| ||||||| |||||||||| |||||||||| | |||||||| ||||    
T  33796325 ctgacaatgtgtttataagtgggggcaatcctcaccttacaagccggttttgtggggttgtgttaggcccaaccaccattt 33796405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 628 - 715
Target Start/End: Original strand, 8026388 - 8026475
Alignment:
Q  628 ctgacaatatgtttataagtggggacaatattcactttacaagtcggttttgtgaggttgtgttaagtccaaccacaatttttaatat 715  Q
    |||||||| ||||||||||||||| ||||  |||| | ||||| |||||||||| |||||||||| | |||||||| |||| ||||||    
T  8026388 ctgacaatttgtttataagtgggggcaatcctcacctcacaagccggttttgtggggttgtgttaggcccaaccacgatttctaatat 8026475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 628 - 715
Target Start/End: Original strand, 27772713 - 27772800
Alignment:
Q  628 ctgacaatatgtttataagtggggacaatattcactttacaagtcggttttgtgaggttgtgttaagtccaaccacaatttttaatat 715  Q
    |||||||| ||||||||||||||| ||||  |||| | ||||| ||||||||||  ||||||||| |||||||||| |||| ||||||    
T  27772713 ctgacaatttgtttataagtgggggcaatcctcacctcacaagccggttttgtggagttgtgttaggtccaaccacgatttctaatat 27772800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 594 - 708
Target Start/End: Complemental strand, 4868696 - 4868582
Alignment:
Q  594 tgtgttaagagtcacagatcggatatgatataatctgacaatatgtttataagtggggacaatattcactttacaagtcggttttgtgaggttgtgttaa 693  Q
    ||||||||||||| || |||||| | || ||   |||||||| ||||||||||||||| ||||  |||| | ||||| |||||||||| ||||||||||     
T  4868696 tgtgttaagagtcccacatcggacaggacatggcctgacaatgtgtttataagtgggggcaatcctcacctcacaagccggttttgtggggttgtgttag 4868597  T
Q  694 gtccaaccacaattt 708  Q
    | |||||||| ||||    
T  4868596 gcccaaccacgattt 4868582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 594 - 708
Target Start/End: Complemental strand, 6542827 - 6542714
Alignment:
Q  594 tgtgttaagagtcacagatcggatatgatataatctgacaatatgtttataagtggggacaatattcactttacaagtcggttttgtgaggttgtgttaa 693  Q
    ||||||||||||| || |||||||| || ||  ||||||||| ||||||||| ||||| ||||  |||| | ||||  |||||||||  |||||||||||    
T  6542827 tgtgttaagagtctcacatcggataggagatggtctgacaatctgtttataaatgggg-caatcatcacctcacaaaccggttttgtagggttgtgttaa 6542729  T
Q  694 gtccaaccacaattt 708  Q
    |||||||||| ||||    
T  6542728 gtccaaccacgattt 6542714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 598 - 692
Target Start/End: Complemental strand, 25065209 - 25065115
Alignment:
Q  598 ttaagagtcacagatcggatatgatataatctgacaatatgtttataagtggggacaatattcactttacaagtcggttttgtgaggttgtgtta 692  Q
    ||||||||| || |||||||| || ||  ||||||||||||||||||||| ||| ||||  |||| | ||||| |||||||||| ||||||||||    
T  25065209 ttaagagtcccacatcggataggacatggtctgacaatatgtttataagtaggggcaatcctcacctcacaagccggttttgtggggttgtgtta 25065115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 628 - 714
Target Start/End: Original strand, 27656457 - 27656543
Alignment:
Q  628 ctgacaatatgtttataagtggggacaatattcactttacaagtcggttttgtgaggttgtgttaagtccaaccacaatttttaata 714  Q
    |||||||| |||||||||||||||  |||  |||| | ||||| |||||||||| |||||||||| | ||||||||||||| |||||    
T  27656457 ctgacaatttgtttataagtgggggaaatcctcacctcacaagccggttttgtggggttgtgttaggcccaaccacaatttctaata 27656543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 595 - 692
Target Start/End: Complemental strand, 6400738 - 6400641
Alignment:
Q  595 gtgttaagagtcacagatcggatatgatataatctgacaatatgtttataagtggggacaatattcactttacaagtcggttttgtgaggttgtgtta 692  Q
    |||||||||||| || |||||| |||| ||   |||||||| ||||||||||||| | ||||  |||| | |||||||||||||||| ||||||||||    
T  6400738 gtgttaagagtctcacatcggacatgacatggcctgacaatgtgtttataagtggaggcaatcctcacatcacaagtcggttttgtggggttgtgtta 6400641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 596 - 708
Target Start/End: Complemental strand, 2736519 - 2736407
Alignment:
Q  596 tgttaagagtcacagatcggatatgatataatctgacaatatgtttataagtggggacaatattcactttacaagtcggttttgtgaggttgtgttaagt 695  Q
    ||||||||||  || ||||||||||| || | |||| ||| ||||||||||||||| ||||  |||| | |||||||||||||||  | ||||||||||     
T  2736519 tgttaagagttccacatcggatatgagatgacctgataatgtgtttataagtgggggcaattctcacatcacaagtcggttttgttggattgtgttaagc 2736420  T
Q  696 ccaaccacaattt 708  Q
    | |||||| ||||    
T  2736419 ctaaccacgattt 2736407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 627 - 715
Target Start/End: Original strand, 13740679 - 13740767
Alignment:
Q  627 tctgacaatatgtttataagtggggacaatattcactttacaagtcggttttgtgaggttgtgttaagtccaaccacaatttttaatat 715  Q
    ||||||||| ||||||||||||| ||||||  || | | | ||||||||||||||||||||||||| |  ||||||| |||| ||||||    
T  13740679 tctgacaatgtgtttataagtggagacaatcctcgcctcataagtcggttttgtgaggttgtgttaggctcaaccacgatttctaatat 13740767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 627 - 715
Target Start/End: Original strand, 13746179 - 13746267
Alignment:
Q  627 tctgacaatatgtttataagtggggacaatattcactttacaagtcggttttgtgaggttgtgttaagtccaaccacaatttttaatat 715  Q
    ||||||||| ||||||||||||| ||||||  || | | | ||||||||||||||||||||||||| |  ||||||| |||| ||||||    
T  13746179 tctgacaatgtgtttataagtggagacaatcctcgcctcataagtcggttttgtgaggttgtgttaggctcaaccacgatttctaatat 13746267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 596 - 708
Target Start/End: Original strand, 33494506 - 33494618
Alignment:
Q  596 tgttaagagtcacagatcggatatgatataatctgacaatatgtttataagtggggacaatattcactttacaagtcggttttgtgaggttgtgttaagt 695  Q
    ||||||||||| || |||||||| || ||    ||| ||||||||||||||||||| ||||  |||| | ||||| |||||||||| |||||||||| |     
T  33494506 tgttaagagtcccacatcggataggagatggcttgaaaatatgtttataagtgggggcaatcctcacctcacaagccggttttgtggggttgtgttaggc 33494605  T
Q  696 ccaaccacaattt 708  Q
    |||||||| ||||    
T  33494606 ccaaccaccattt 33494618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 596 - 703
Target Start/End: Complemental strand, 2737287 - 2737180
Alignment:
Q  596 tgttaagagtcacagatcggatatgatataatctgacaatatgtttataagtggggacaatattcactttacaagtcggttttgtgaggttgtgttaagt 695  Q
    ||||||||||  || ||||||||||| || | |||| ||| ||||||||||||||| ||||  |||| | |||||||||||||||  | ||||||||||     
T  2737287 tgttaagagttccacatcggatatgagatgacctgataatgtgtttataagtgggggcaattctcacatcacaagtcggttttgttggattgtgttaagc 2737188  T
Q  696 ccaaccac 703  Q
    | ||||||    
T  2737187 ctaaccac 2737180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 628 - 715
Target Start/End: Original strand, 27653216 - 27653303
Alignment:
Q  628 ctgacaatatgtttataagtggggacaatattcactttacaagtcggttttgtgaggttgtgttaagtccaaccacaatttttaatat 715  Q
    |||||||| |||||||||||||||  |||  |||| | |||||||||||||||| | |||||||| | |||||||| |||| ||||||    
T  27653216 ctgacaatttgtttataagtgggggaaatcctcacctcacaagtcggttttgtgggattgtgttaggcccaaccacgatttctaatat 27653303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 637 - 700
Target Start/End: Original strand, 32993516 - 32993579
Alignment:
Q  637 tgtttataagtggggacaatattcactttacaagtcggttttgtgaggttgtgttaagtccaac 700  Q
    |||||||||||||||||||| ||||| ||||||||| |||||||  |||| |||||||| ||||    
T  32993516 tgtttataagtggggacaatcttcaccttacaagtcagttttgtagggttatgttaagtgcaac 32993579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 595 - 681
Target Start/End: Original strand, 3680212 - 3680298
Alignment:
Q  595 gtgttaagagtcacagatcggatatgatataatctgacaatatgtttataagtggggacaatattcactttacaagtcggttttgtg 681  Q
    |||||||||||| || ||||||||||  ||  ||||||||| ||||||||||||||| ||||  |||| | |||||| |||||||||    
T  3680212 gtgttaagagtcccacatcggatatgtgatggtctgacaatgtgtttataagtgggggcaatcatcacctcacaagttggttttgtg 3680298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 595 - 717
Target Start/End: Complemental strand, 19639231 - 19639109
Alignment:
Q  595 gtgttaagagtcacagatcggatatgatataatctgacaatatgtttataagtggggacaatattcactttacaagtcggttttgtgaggttgtgttaag 694  Q
    ||||||||| || || || ||||| |||||   |||||||| ||||||||||||||||||||  |||| | ||||  |||||| ||| || ||||||| |    
T  19639231 gtgttaagaatcccacataggataagatatggcctgacaatgtgtttataagtggggacaatcctcacctcacaaaccggtttagtggggctgtgttagg 19639132  T
Q  695 tccaaccacaatttttaatataa 717  Q
    ||||||||| |||| ||| ||||    
T  19639131 tccaaccacgatttctaagataa 19639109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 628 - 714
Target Start/End: Original strand, 27772945 - 27773031
Alignment:
Q  628 ctgacaatatgtttataagtggggacaatattcactttacaagtcggttttgtgaggttgtgttaagtccaaccacaatttttaata 714  Q
    |||||||| ||||||||||||||| ||||  |||| | |||||  ||||||||| | |||||||||| ||||||| ||||| |||||    
T  27772945 ctgacaatttgtttataagtgggggcaatcctcacctcacaagctggttttgtgggattgtgttaagcccaaccataatttctaata 27773031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 631 - 700
Target Start/End: Complemental strand, 7638930 - 7638861
Alignment:
Q  631 acaatatgtttataagtggggacaatattcactttacaagtcggttttgtgaggttgtgttaagtccaac 700  Q
    ||||||||||||||| || ||||||| ||||| | |||||  ||||||||| |||||||||| |||||||    
T  7638930 acaatatgtttataaatgaggacaatcttcacctcacaagctggttttgtgcggttgtgttaggtccaac 7638861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 626 - 702
Target Start/End: Original strand, 2753255 - 2753331
Alignment:
Q  626 atctgacaatatgtttataagtggggacaatattcactttacaagtcggttttgtgaggttgtgttaagtccaacca 702  Q
    |||||||||| |||||||||||||||  |||  |||| | ||||| |||||||||| |||||||||| | |||||||    
T  2753255 atctgacaatgtgtttataagtgggggtaatcctcacctcacaaggcggttttgtggggttgtgttaggcccaacca 2753331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 596 - 708
Target Start/End: Original strand, 3679979 - 3680091
Alignment:
Q  596 tgttaagagtcacagatcggatatgatataatctgacaatatgtttataagtggggacaatattcactttacaagtcggttttgtgaggttgtgttaagt 695  Q
    ||||||||||| ||  ||||||| |  ||| ||||||||| ||||||||| ||||| ||||  ||   | |||||||| ||||||| |||||||||| |     
T  3679979 tgttaagagtctcacgtcggataagtgatagtctgacaatgtgtttataactgggggcaatcctcctctcacaagtcgattttgtggggttgtgttaggc 3680078  T
Q  696 ccaaccacaattt 708  Q
    |||||||||||||    
T  3680079 ccaaccacaattt 3680091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 632 - 708
Target Start/End: Complemental strand, 4868894 - 4868818
Alignment:
Q  632 caatatgtttataagtggggacaatattcactttacaagtcggttttgtgaggttgtgttaagtccaaccacaattt 708  Q
    |||| ||||||||||||||| ||||  |||| | ||||| |||||||||| |||||||||| | |||||||| ||||    
T  4868894 caatgtgtttataagtgggggcaatcctcacctcacaagccggttttgtggggttgtgttaggcccaaccacgattt 4868818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 628 - 708
Target Start/End: Complemental strand, 5572469 - 5572389
Alignment:
Q  628 ctgacaatatgtttataagtggggacaatattcactttacaagtcggttttgtgaggttgtgttaagtccaaccacaattt 708  Q
    |||||||| ||||||||||| ||| | ||  |||| | |||||||||||||||| |||||||||| | |||||||| ||||    
T  5572469 ctgacaatttgtttataagttggggccatcctcacctcacaagtcggttttgtggggttgtgttaggcccaaccacgattt 5572389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 632 - 708
Target Start/End: Complemental strand, 5648753 - 5648677
Alignment:
Q  632 caatatgtttataagtggggacaatattcactttacaagtcggttttgtgaggttgtgttaagtccaaccacaattt 708  Q
    |||| ||||||||| |  |||||||  |||| | ||||| ||||||||||||||||||||| ||||||||| |||||    
T  5648753 caatgtgtttataattaaggacaatcatcacctcacaagccggttttgtgaggttgtgttaggtccaaccataattt 5648677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 596 - 692
Target Start/End: Complemental strand, 6543060 - 6542964
Alignment:
Q  596 tgttaagagtcacagatcggatatgatataatctgacaatatgtttataagtggggacaatattcactttacaagtcggttttgtgaggttgtgtta 692  Q
    ||||||||||  || |||||||| || ||  ||||||||| ||||||||||||||| ||||  |||| | | ||| |||||||||| ||||||||||    
T  6543060 tgttaagagttccacatcggataagagatggtctgacaatgtgtttataagtgggggcaatcatcacctcagaagccggttttgtggggttgtgtta 6542964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 636 - 708
Target Start/End: Complemental strand, 8001627 - 8001555
Alignment:
Q  636 atgtttataagtggggacaatattcactttacaagtcggttttgtgaggttgtgttaagtccaaccacaattt 708  Q
    |||||||||||||||| |||| ||||| | | |||||| ||||||  |||||||||| | |||||||||||||    
T  8001627 atgtttataagtgggggcaatcttcacctcataagtcgattttgttgggttgtgttaggcccaaccacaattt 8001555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 628 - 708
Target Start/End: Original strand, 19712951 - 19713031
Alignment:
Q  628 ctgacaatatgtttataagtggggacaatattcactttacaagtcggttttgtgaggttgtgttaagtccaaccacaattt 708  Q
    |||||||| ||||||||||||||| ||||  |||| | ||||| |||||||||| | |||||||| | |||||||| ||||    
T  19712951 ctgacaatttgtttataagtgggggcaattctcacctcacaagccggttttgtgggattgtgttaggcccaaccaccattt 19713031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 595 - 715
Target Start/End: Original strand, 21690688 - 21690808
Alignment:
Q  595 gtgttaagagtcacagatcggatatgatataatctgacaatatgtttataagtggggacaatattcactttacaagtcggttttgtgaggttgtgttaag 694  Q
    |||||||||||| || ||||| || ||| |   |||||||| ||||||||||||||| ||||  |||| | ||||| || ||||||| |||||||||| |    
T  21690688 gtgttaagagtcccacatcggttaggatttggcctgacaatttgtttataagtgggggcaatcctcacctcacaagccgattttgtggggttgtgttagg 21690787  T
Q  695 tccaaccacaatttttaatat 715  Q
      ||||||| |||| ||||||    
T  21690788 ctcaaccacgatttctaatat 21690808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 627 - 690
Target Start/End: Original strand, 15600934 - 15600997
Alignment:
Q  627 tctgacaatatgtttataagtggggacaatattcactttacaagtcggttttgtgaggttgtgt 690  Q
    ||||| ||| ||||||||||||||| ||||  |||||| ||||||| |||||||| ||||||||    
T  15600934 tctgataatttgtttataagtgggggcaatcctcacttcacaagtcagttttgtggggttgtgt 15600997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 627 - 712
Target Start/End: Original strand, 6065975 - 6066058
Alignment:
Q  627 tctgacaatatgtttataagtggggacaatattcactttacaagtcggttttgtgaggttgtgttaagtccaaccacaatttttaa 712  Q
    ||||||||| |||||||||| |||  ||||  |||| | |||||| ||||||||| |||||||||| | |||||||||||| ||||    
T  6065975 tctgacaatgtgtttataaggggg--caatcctcacctgacaagttggttttgtggggttgtgttaggcccaaccacaattcttaa 6066058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 594 - 692
Target Start/End: Original strand, 9705219 - 9705317
Alignment:
Q  594 tgtgttaagagtcacagatcggatatgatataatctgacaatatgtttataagtggggacaatattcactttacaagtcggttttgtgaggttgtgtta 692  Q
    ||||||||||||| || |||||||| || ||    | ||||| ||||||||||||||| ||||  |||| | ||||| |||||||||| ||||||||||    
T  9705219 tgtgttaagagtcccacatcggataggacatggcttaacaatgtgtttataagtgggggcaatcctcacctcacaagccggttttgtggggttgtgtta 9705317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 628 - 702
Target Start/End: Original strand, 16570158 - 16570232
Alignment:
Q  628 ctgacaatatgtttataagtggggacaatattcactttacaagtcggttttgtgaggttgtgttaagtccaacca 702  Q
    |||||||| |||||||||| ||||  |||  |||| | |||||||||||||||| |||||||||| | |||||||    
T  16570158 ctgacaatgtgtttataagcgggggtaatcctcacgtaacaagtcggttttgtggggttgtgttaggcccaacca 16570232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 594 - 652
Target Start/End: Original strand, 33494739 - 33494797
Alignment:
Q  594 tgtgttaagagtcacagatcggatatgatataatctgacaatatgtttataagtgggga 652  Q
    ||||||||||||| || |||||||| || ||  ||||||||||| ||||||||||||||    
T  33494739 tgtgttaagagtcccacatcggataggagatggtctgacaatatatttataagtgggga 33494797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 596 - 681
Target Start/End: Complemental strand, 6400963 - 6400878
Alignment:
Q  596 tgttaagagtcacagatcggatatgatataatctgacaatatgtttataagtggggacaatattcactttacaagtcggttttgtg 681  Q
    ||||||||||| || |||||| |||| ||   |||||||||||||||||||||| | ||||  |||| | ||||| ||||||||||    
T  6400963 tgttaagagtcccacatcggacatgacatggcctgacaatatgtttataagtggaggcaatcctcacctcacaagccggttttgtg 6400878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 627 - 708
Target Start/End: Complemental strand, 8567044 - 8566964
Alignment:
Q  627 tctgacaatatgtttataagtggggacaatattcactttacaagtcggttttgtgaggttgtgttaagtccaaccacaattt 708  Q
    ||||||||| ||||||||||| ||||||||  |||| | ||||  |||||||||| |||||||||| | |||||||| ||||    
T  8567044 tctgacaatgtgtttataagt-gggacaatcctcacctcacaaaccggttttgtggggttgtgttaggcccaaccacgattt 8566964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 631 - 708
Target Start/End: Original strand, 11721907 - 11721984
Alignment:
Q  631 acaatatgtttataagtggggacaatattcactttacaagtcggttttgtgaggttgtgttaagtccaaccacaattt 708  Q
    ||||| ||||||||||||||| ||||  |||| | | ||| |||||||||| |||||||||| | |||||||| ||||    
T  11721907 acaatttgtttataagtgggggcaatcctcacctcataagccggttttgtggggttgtgttaggcccaaccacgattt 11721984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 675 - 712
Target Start/End: Complemental strand, 26192451 - 26192414
Alignment:
Q  675 ttttgtgaggttgtgttaagtccaaccacaatttttaa 712  Q
    |||||||||||||||||  |||||||||||||||||||    
T  26192451 ttttgtgaggttgtgttgggtccaaccacaatttttaa 26192414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 49; Significance: 1e-18; HSPs: 38)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 596 - 708
Target Start/End: Complemental strand, 400682 - 400570
Alignment:
Q  596 tgttaagagtcacagatcggatatgatataatctgacaatatgtttataagtggggacaatattcactttacaagtcggttttgtgaggttgtgttaagt 695  Q
    ||||||||||| || ||| ||||||| ||  ||||||||| |||||||||||||||  |||  |||| | ||||| |||||||||||||||||||||||     
T  400682 tgttaagagtctcacatcagatatgagatggtctgacaatgtgtttataagtgggggaaatcctcacctcacaagccggttttgtgaggttgtgttaagc 400583  T
Q  696 ccaaccacaattt 708  Q
     ||||||||||||    
T  400582 tcaaccacaattt 400570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 593 - 708
Target Start/End: Complemental strand, 22231193 - 22231078
Alignment:
Q  593 atgtgttaagagtcacagatcggatatgatataatctgacaatatgtttataagtggggacaatattcactttacaagtcggttttgtgaggttgtgtta 692  Q
    ||||||||||||||  | |||||||| |||||   |||||||| ||||||||||||||||||||  |||| | ||||| |||||||||| |||||| |||    
T  22231193 atgtgttaagagtcctacatcggataggatatggcctgacaatgtgtttataagtggggacaatcctcacctcacaagccggttttgtggggttgtatta 22231094  T
Q  693 agtccaaccacaattt 708  Q
     |||||||||| ||||    
T  22231093 ggtccaaccacgattt 22231078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 629 - 708
Target Start/End: Complemental strand, 35796826 - 35796747
Alignment:
Q  629 tgacaatatgtttataagtggggacaatattcactttacaagtcggttttgtgaggttgtgttaagtccaaccacaattt 708  Q
    ||||||| ||||||||||||||| ||||  |||| | ||||| |||||||||||||||||||||||||||||||| ||||    
T  35796826 tgacaatgtgtttataagtgggggcaatcctcacctcacaagccggttttgtgaggttgtgttaagtccaaccaccattt 35796747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 628 - 715
Target Start/End: Complemental strand, 53815014 - 53814927
Alignment:
Q  628 ctgacaatatgtttataagtggggacaatattcactttacaagtcggttttgtgaggttgtgttaagtccaaccacaatttttaatat 715  Q
    |||||||| ||||||||||||||| ||||  |||| | |||||||||||||||| |||||||||||| |||||||| |||| ||||||    
T  53815014 ctgacaatttgtttataagtgggggcaatcctcacctcacaagtcggttttgtggggttgtgttaagcccaaccacgatttctaatat 53814927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 595 - 708
Target Start/End: Complemental strand, 22231426 - 22231313
Alignment:
Q  595 gtgttaagagtcacagatcggatatgatataatctgacaatatgtttataagtggggacaatattcactttacaagtcggttttgtgaggttgtgttaag 694  Q
    ||||||||||||  | |||||||||||||| | |||| ||||| ||||||||||||| ||||  |||| | ||||| |||||||||| |||||||||| |    
T  22231426 gtgttaagagtcctacatcggatatgatatgacctgagaatatatttataagtgggggcaatcctcacctcacaagccggttttgtggggttgtgttagg 22231327  T
Q  695 tccaaccacaattt 708  Q
     |||||||| ||||    
T  22231326 cccaaccacgattt 22231313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 631 - 715
Target Start/End: Original strand, 9685400 - 9685484
Alignment:
Q  631 acaatatgtttataagtggggacaatattcactttacaagtcggttttgtgaggttgtgttaagtccaaccacaatttttaatat 715  Q
    ||||| ||||||||||||||| ||||  |||| | ||||||||||||||||||||||||||| | |||||||| |||| ||||||    
T  9685400 acaatttgtttataagtggggccaatcctcacctcacaagtcggttttgtgaggttgtgttaggcccaaccacgatttctaatat 9685484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 628 - 714
Target Start/End: Original strand, 21498794 - 21498880
Alignment:
Q  628 ctgacaatatgtttataagtggggacaatattcactttacaagtcggttttgtgaggttgtgttaagtccaaccacaatttttaata 714  Q
    |||||||| ||||||||||||||| ||||  |||| | ||||| |||||||||| |||||||||| | |||||||| |||| |||||    
T  21498794 ctgacaatttgtttataagtgggggcaatcctcacctcacaagccggttttgtggggttgtgttaggcccaaccacgatttctaata 21498880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 594 - 708
Target Start/End: Complemental strand, 39902682 - 39902568
Alignment:
Q  594 tgtgttaagagtcacagatcggatatgatataatctgacaatatgtttataagtggggacaatattcactttacaagtcggttttgtgaggttgtgttaa 693  Q
    ||||||||||||| || |||||||| || ||   |||||||| ||||||||||||||| ||||  |||| | |||||  ||||||||| ||||||||||     
T  39902682 tgtgttaagagtcccacatcggataggacatggcctgacaatgtgtttataagtgggggcaatcctcacctcacaagctggttttgtggggttgtgttag 39902583  T
Q  694 gtccaaccacaattt 708  Q
    | |||||||| ||||    
T  39902582 gcccaaccaccattt 39902568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 596 - 702
Target Start/End: Original strand, 52559534 - 52559640
Alignment:
Q  596 tgttaagagtcacagatcggatatgatataatctgacaatatgtttataagtggggacaatattcactttacaagtcggttttgtgaggttgtgttaagt 695  Q
    |||||| |||| || || |||||||| || | |||||||| ||||||||||||||| ||||  |||| | ||||| |||||||||| |||||||||| |     
T  52559534 tgttaaaagtctcacattggatatgacatgacctgacaatgtgtttataagtgggggcaatcatcacctcacaagccggttttgtggggttgtgttaggc 52559633  T
Q  696 ccaacca 702  Q
    |||||||    
T  52559634 ccaacca 52559640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 628 - 716
Target Start/End: Original strand, 20821972 - 20822060
Alignment:
Q  628 ctgacaatatgtttataagtggggacaatattcactttacaagtcggttttgtgaggttgtgttaagtccaaccacaatttttaatata 716  Q
    |||||||| ||||||||||||||| ||||  |||| | ||||| |||||||||| | |||||||| | |||||||| |||| |||||||    
T  20821972 ctgacaatttgtttataagtgggggcaattctcacctcacaagccggttttgtgggattgtgttaggcccaaccacgatttctaatata 20822060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 596 - 708
Target Start/End: Original strand, 21684965 - 21685077
Alignment:
Q  596 tgttaagagtcacagatcggatatgatataatctgacaatatgtttataagtggggacaatattcactttacaagtcggttttgtgaggttgtgttaagt 695  Q
    ||||||||||| || |||||||| || ||   |||||||| ||||||||||||||   |||  |||| | ||||| || ||||||| ||||||||||||     
T  21684965 tgttaagagtctcacatcggataggacatggcctgacaatgtgtttataagtgggataaatcctcacctcacaagccgattttgtggggttgtgttaagc 21685064  T
Q  696 ccaaccacaattt 708  Q
    |||||||||||||    
T  21685065 ccaaccacaattt 21685077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 596 - 708
Target Start/End: Complemental strand, 22845564 - 22845452
Alignment:
Q  596 tgttaagagtcacagatcggatatgatataatctgacaatatgtttataagtggggacaatattcactttacaagtcggttttgtgaggttgtgttaagt 695  Q
    ||||||||||| || ||| ||||||| ||   |||||||| |||||||||||||||  |||  |||| | ||||| |||||||||| |||||||||| |     
T  22845564 tgttaagagtcccacatcagatatgacatggcctgacaatgtgtttataagtgggggtaatcctcacctcacaagccggttttgtggggttgtgttaggc 22845465  T
Q  696 ccaaccacaattt 708  Q
    |||||||| ||||    
T  22845464 ccaaccacgattt 22845452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 594 - 714
Target Start/End: Complemental strand, 28245645 - 28245525
Alignment:
Q  594 tgtgttaagagtcacagatcggatatgatataatctgacaatatgtttataagtggggacaatattcactttacaagtcggttttgtgaggttgtgttaa 693  Q
    ||||||||||||| || |||||||| |  ||   |||||||| ||||||||||||||| ||||  |||| | ||||| |||||||||| ||||||||||     
T  28245645 tgtgttaagagtctcacatcggataggtgatggcctgacaatgtgtttataagtgggggcaatcctcacctcacaagccggttttgtggggttgtgttag 28245546  T
Q  694 gtccaaccacaatttttaata 714  Q
    | ||||| || |||| |||||    
T  28245545 gcccaactacgatttctaata 28245525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 596 - 715
Target Start/End: Complemental strand, 14783304 - 14783185
Alignment:
Q  596 tgttaagagtcacagatcggatatgatataatctgacaatatgtttataagtggggacaatattcactttacaagtcggttttgtgaggttgtgttaagt 695  Q
    ||||||||||| || ||||| || ||  | |||||||||| ||||||||| || || ||||  |||| | ||||| |||||||||| |||||||||| |     
T  14783304 tgttaagagtcccacatcggttaggagttgatctgacaatttgtttataactgtgggcaatcatcacctcacaagccggttttgtggggttgtgttaggc 14783205  T
Q  696 ccaaccacaatttttaatat 715  Q
    |||||||| |||| ||||||    
T  14783204 ccaaccacgatttctaatat 14783185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 628 - 715
Target Start/End: Original strand, 21498353 - 21498440
Alignment:
Q  628 ctgacaatatgtttataagtggggacaatattcactttacaagtcggttttgtgaggttgtgttaagtccaaccacaatttttaatat 715  Q
    |||||||| ||||||||||||||| ||||  |||| | ||||| |||||||||| |||| ||||| | |||||||| |||| ||||||    
T  21498353 ctgacaatttgtttataagtgggggcaatcctcacctcacaagccggttttgtggggttatgttaggcccaaccacgatttctaatat 21498440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 628 - 714
Target Start/End: Complemental strand, 53814759 - 53814673
Alignment:
Q  628 ctgacaatatgtttataagtggggacaatattcactttacaagtcggttttgtgaggttgtgttaagtccaaccacaatttttaata 714  Q
    |||||||| |||||||||||||||| |||  |||| | ||||| |||||||||| | |||||||| | |||||||| |||| |||||    
T  53814759 ctgacaatttgtttataagtggggataatcctcacctcacaagccggttttgtgggattgtgttaggcccaaccacgatttctaata 53814673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 631 - 692
Target Start/End: Original strand, 6218206 - 6218267
Alignment:
Q  631 acaatatgtttataagtggggacaatattcactttacaagtcggttttgtgaggttgtgtta 692  Q
    ||||||||||||||||||||| |||| ||||| | ||||| ||||||||||  |||||||||    
T  6218206 acaatatgtttataagtgggggcaatcttcacctcacaagacggttttgtggagttgtgtta 6218267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 595 - 708
Target Start/End: Original strand, 35788860 - 35788973
Alignment:
Q  595 gtgttaagagtcacagatcggatatgatataatctgacaatatgtttataagtggggacaatattcactttacaagtcggttttgtgaggttgtgttaag 694  Q
    |||||||||||| || ||||||||  | ||   |||||||| ||||||||||||||| ||||  |||  | ||||| |||||||||| |||||||||| |    
T  35788860 gtgttaagagtcccacatcggatagaacatggcctgacaatgtgtttataagtgggggcaatcctcatctcacaagccggttttgtggggttgtgttagg 35788959  T
Q  695 tccaaccacaattt 708  Q
     |||||||| ||||    
T  35788960 cccaaccacgattt 35788973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 595 - 700
Target Start/End: Complemental strand, 35797095 - 35796990
Alignment:
Q  595 gtgttaagagtcacagatcggatatgatataatctgacaatatgtttataagtggggacaatattcactttacaagtcggttttgtgaggttgtgttaag 694  Q
    |||||||||||| || |||||| | || || |  ||||||||||||||||||||||| ||||  |||| | ||||  | |||||||| ||||||||||||    
T  35797095 gtgttaagagtcccatatcggacaggagatgacatgacaatatgtttataagtgggggcaatcctcacctcacaaaccagttttgtggggttgtgttaag 35796996  T
Q  695 tccaac 700  Q
     |||||    
T  35796995 cccaac 35796990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 628 - 712
Target Start/End: Complemental strand, 11036831 - 11036747
Alignment:
Q  628 ctgacaatatgtttataagtggggacaatattcactttacaagtcggttttgtgaggttgtgttaagtccaaccacaatttttaa 712  Q
    |||||||| ||||||||||||||| ||||  |||| | ||||| || || |||| |||||||||| | | |||||||||||||||    
T  11036831 ctgacaatgtgtttataagtgggggcaatcctcacctcacaagccgattgtgtggggttgtgttaggcctaaccacaatttttaa 11036747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 628 - 692
Target Start/End: Complemental strand, 12869114 - 12869050
Alignment:
Q  628 ctgacaatatgtttataagtggggacaatattcactttacaagtcggttttgtgaggttgtgtta 692  Q
    |||||||| ||||||||||||||| ||||  |||| | ||||| |||||||||| ||||||||||    
T  12869114 ctgacaatttgtttataagtgggggcaatcatcacctcacaagccggttttgtggggttgtgtta 12869050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 627 - 707
Target Start/End: Complemental strand, 13611835 - 13611755
Alignment:
Q  627 tctgacaatatgtttataagtggggacaatattcactttacaagtcggttttgtgaggttgtgttaagtccaaccacaatt 707  Q
    ||||||||||| |||||||||||||| |||  |||| | |||||  ||||||| | ||||| |||||| ||||||||||||    
T  13611835 tctgacaatatatttataagtggggataatcctcacctcacaaggtggttttgcggggttgagttaagaccaaccacaatt 13611755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 628 - 708
Target Start/End: Original strand, 17111767 - 17111847
Alignment:
Q  628 ctgacaatatgtttataagtggggacaatattcactttacaagtcggttttgtgaggttgtgttaagtccaaccacaattt 708  Q
    |||||||| |||||||||||||||  | |  |||||| | ||| || |||| ||||||||||||| |||||||||||||||    
T  17111767 ctgacaatgtgtttataagtggggttattcatcacttcaaaagccgattttatgaggttgtgttaggtccaaccacaattt 17111847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 628 - 708
Target Start/End: Original strand, 22863473 - 22863553
Alignment:
Q  628 ctgacaatatgtttataagtggggacaatattcactttacaagtcggttttgtgaggttgtgttaagtccaaccacaattt 708  Q
    |||||||| ||||||||||||||| ||||  ||||   ||||| |||||||||| |||||||||| | |||||||| ||||    
T  22863473 ctgacaatgtgtttataagtgggggcaatcctcaccccacaagccggttttgtggggttgtgttaggcccaaccacgattt 22863553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 644 - 712
Target Start/End: Original strand, 32002338 - 32002406
Alignment:
Q  644 aagtggggacaatattcactttacaagtcggttttgtgaggttgtgttaagtccaaccacaatttttaa 712  Q
    |||||||| |||| ||||| |||||| |||||||||||||||||| |||   |||| ||||||||||||    
T  32002338 aagtgggggcaatcttcaccttacaaatcggttttgtgaggttgtattagacccaaacacaatttttaa 32002406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 596 - 708
Target Start/End: Original strand, 35788626 - 35788738
Alignment:
Q  596 tgttaagagtcacagatcggatatgatataatctgacaatatgtttataagtggggacaatattcactttacaagtcggttttgtgaggttgtgttaagt 695  Q
    ||||||||||| || ||| |||| || ||   |||||||| ||||||||||||||| ||||  |||| | ||||| ||||||| || |||||||||| |     
T  35788626 tgttaagagtcccacatcagataggacatggcctgacaatgtgtttataagtgggggcaatcctcacctcacaagccggttttatggggttgtgttaggc 35788725  T
Q  696 ccaaccacaattt 708  Q
    |||||||| ||||    
T  35788726 ccaaccacgattt 35788738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 628 - 712
Target Start/End: Complemental strand, 35819213 - 35819129
Alignment:
Q  628 ctgacaatatgtttataagtggggacaatattcactttacaagtcggttttgtgaggttgtgttaagtccaaccacaatttttaa 712  Q
    |||||||| |||||||| |||||| ||||  || | | ||||| | ||||||||||||||||||| | |||||||| ||||||||    
T  35819213 ctgacaatttgtttatatgtgggggcaatcctcgcctcacaagccagttttgtgaggttgtgttaggcccaaccacgatttttaa 35819129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 628 - 708
Target Start/End: Complemental strand, 40717526 - 40717446
Alignment:
Q  628 ctgacaatatgtttataagtggggacaatattcactttacaagtcggttttgtgaggttgtgttaagtccaaccacaattt 708  Q
    |||| ||| ||||||||||||||| ||||  |||| | | |||||||||||||| |||||||||| | |||||||| ||||    
T  40717526 ctgataatttgtttataagtgggggcaatcctcacctcaaaagtcggttttgtggggttgtgttaggcccaaccacgattt 40717446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 628 - 708
Target Start/End: Complemental strand, 53828608 - 53828528
Alignment:
Q  628 ctgacaatatgtttataagtggggacaatattcactttacaagtcggttttgtgaggttgtgttaagtccaaccacaattt 708  Q
    |||||||| ||||||||||||||| ||||  |||| | | ||| || ||||||| |||||||||| | |||||||||||||    
T  53828608 ctgacaatttgtttataagtgggggcaatcctcacctcataagccgattttgtggggttgtgttaggcccaaccacaattt 53828528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 631 - 714
Target Start/End: Original strand, 9685634 - 9685717
Alignment:
Q  631 acaatatgtttataagtggggacaatattcactttacaagtcggttttgtgaggttgtgttaagtccaaccacaatttttaata 714  Q
    ||||| ||||||||||||||| ||||  |||| | ||||| ||||||| || |||||||||| | |||||||| |||| |||||    
T  9685634 acaatttgtttataagtgggggcaatcctcacctcacaagccggttttatggggttgtgttaggcccaaccacgatttctaata 9685717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 629 - 708
Target Start/End: Complemental strand, 12869347 - 12869268
Alignment:
Q  629 tgacaatatgtttataagtggggacaatattcactttacaagtcggttttgtgaggttgtgttaagtccaaccacaattt 708  Q
    ||||||| | ||||||||||||||||||  |||| | | ||| |||||||||| |||||||||| | |||||||| ||||    
T  12869347 tgacaatttatttataagtggggacaatcctcacctcataagacggttttgtggggttgtgttaggcccaaccacgattt 12869268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 593 - 684
Target Start/End: Complemental strand, 31254527 - 31254436
Alignment:
Q  593 atgtgttaagagtcacagatcggatatgatataatctgacaatatgtttataagtggggacaatattcactttacaagtcggttttgtgagg 684  Q
    |||||||||||||| || |||||||| |  ||   |||||||| ||||||||||||||| ||||  |||| ||||||  |||||||||||||    
T  31254527 atgtgttaagagtcccacatcggataggtgatggcctgacaatgtgtttataagtgggggcaatcctcaccttacaaaccggttttgtgagg 31254436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 628 - 714
Target Start/End: Complemental strand, 2261838 - 2261752
Alignment:
Q  628 ctgacaatatgtttataagtggggacaatattcactttacaagtcggttttgtgaggttgtgttaagtccaaccacaatttttaata 714  Q
    |||||||| | ||||||||||||||||||  |||| | |||   | |||||||| ||||||||||||| ||||||| |||| |||||    
T  2261838 ctgacaatttatttataagtggggacaatcctcacctcacagaccagttttgtggggttgtgttaagttcaaccaccatttctaata 2261752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 594 - 708
Target Start/End: Complemental strand, 50543449 - 50543335
Alignment:
Q  594 tgtgttaagagtcacagatcggatatgatataatctgacaatatgtttataagtggggacaatattcactttacaagtcggttttgtgaggttgtgttaa 693  Q
    ||||||||||| | || |||||||| |  ||  ||||||||| ||| ||||||||||| ||||  ||||   ||||| |||||||||| ||||||||||     
T  50543449 tgtgttaagagccccacatcggataggtgatggtctgacaatgtgtgtataagtgggggcaatcctcaccccacaagccggttttgtggggttgtgttag 50543350  T
Q  694 gtccaaccacaattt 708  Q
    | |||||||| ||||    
T  50543349 gcccaaccacgattt 50543335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 668 - 702
Target Start/End: Complemental strand, 55330151 - 55330117
Alignment:
Q  668 aagtcggttttgtgaggttgtgttaagtccaacca 702  Q
    ||||||||||||||||||||| |||||||||||||    
T  55330151 aagtcggttttgtgaggttgtattaagtccaacca 55330117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 628 - 701
Target Start/End: Original strand, 9279226 - 9279299
Alignment:
Q  628 ctgacaatatgtttataagtggggacaatattcactttacaagtcggttttgtgaggttgtgttaagtccaacc 701  Q
    |||||||| ||||||||||||||| ||||  |||| | || || |||||||||| |||||||||| | ||||||    
T  9279226 ctgacaatgtgtttataagtgggggcaatcatcacctcactagccggttttgtggggttgtgttaggcccaacc 9279299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 637 - 690
Target Start/End: Complemental strand, 35609566 - 35609513
Alignment:
Q  637 tgtttataagtggggacaatattcactttacaagtcggttttgtgaggttgtgt 690  Q
    ||||||||||||||| ||||  |||| | |||||||||||||||| ||||||||    
T  35609566 tgtttataagtgggggcaatcctcacctcacaagtcggttttgtggggttgtgt 35609513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 639 - 708
Target Start/End: Original strand, 37836090 - 37836159
Alignment:
Q  639 tttataagtggggacaatattcactttacaagtcggttttgtgaggttgtgttaagtccaaccacaattt 708  Q
    ||||||||||||| ||||  || | ||||||| |||||||||| |||||||||| | | |||||||||||    
T  37836090 tttataagtgggggcaatcctctccttacaagccggttttgtggggttgtgttaggcctaaccacaattt 37836159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 49; Significance: 1e-18; HSPs: 39)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 596 - 708
Target Start/End: Original strand, 22729067 - 22729179
Alignment:
Q  596 tgttaagagtcacagatcggatatgatataatctgacaatatgtttataagtggggacaatattcactttacaagtcggttttgtgaggttgtgttaagt 695  Q
    |||| |||||| || |||||||| || ||  ||||||||| |||||| |||||||| ||||  |||||| ||||| ||||||||||||||||||||| |     
T  22729067 tgttcagagtcccacatcggataggagatggtctgacaatgtgtttacaagtgggggcaatcctcacttcacaagccggttttgtgaggttgtgttaggc 22729166  T
Q  696 ccaaccacaattt 708  Q
    |||||||||||||    
T  22729167 ccaaccacaattt 22729179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 594 - 708
Target Start/End: Original strand, 16239792 - 16239906
Alignment:
Q  594 tgtgttaagagtcacagatcggatatgatataatctgacaatatgtttataagtggggacaatattcactttacaagtcggttttgtgaggttgtgttaa 693  Q
    ||||||||||||||||   |||||| || ||   |||||||||||||||||||||||| |||   |||| | |||||||||||||||| ||||||||||     
T  16239792 tgtgttaagagtcacacgacggataggacatggcctgacaatatgtttataagtgggggcaaatctcacctcacaagtcggttttgtggggttgtgttag 16239891  T
Q  694 gtccaaccacaattt 708  Q
    |||||| ||||||||    
T  16239892 gtccaagcacaattt 16239906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 594 - 712
Target Start/End: Complemental strand, 23708343 - 23708225
Alignment:
Q  594 tgtgttaagagtcacagatcggatatgatataatctgacaatatgtttataagtggggacaatattcactttacaagtcggttttgtgaggttgtgttaa 693  Q
    ||||||||||||| || ||| | || ||  || ||||||||| ||||||||||||||| ||||  |||| | ||||| |||||||||||| ||||||||     
T  23708343 tgtgttaagagtcccacatcagttaggagttagtctgacaatttgtttataagtgggggcaatcctcacctcacaagccggttttgtgagattgtgttag 23708244  T
Q  694 gtccaaccacaatttttaa 712  Q
    |||||| ||||||||||||    
T  23708243 gtccaatcacaatttttaa 23708225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 594 - 712
Target Start/End: Complemental strand, 23726799 - 23726681
Alignment:
Q  594 tgtgttaagagtcacagatcggatatgatataatctgacaatatgtttataagtggggacaatattcactttacaagtcggttttgtgaggttgtgttaa 693  Q
    ||||||||||||| || ||| | || ||  || ||||||||| ||||||||||||||| ||||  |||| | ||||| |||||||||||| ||||||||     
T  23726799 tgtgttaagagtcccacatcagttaggagttagtctgacaatttgtttataagtgggggcaatcctcacctcacaagccggttttgtgagattgtgttag 23726700  T
Q  694 gtccaaccacaatttttaa 712  Q
    |||||| ||||||||||||    
T  23726699 gtccaatcacaatttttaa 23726681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 594 - 712
Target Start/End: Complemental strand, 23745255 - 23745137
Alignment:
Q  594 tgtgttaagagtcacagatcggatatgatataatctgacaatatgtttataagtggggacaatattcactttacaagtcggttttgtgaggttgtgttaa 693  Q
    ||||||||||||| || ||| | || ||  || ||||||||| ||||||||||||||| ||||  |||| | ||||| |||||||||||| ||||||||     
T  23745255 tgtgttaagagtcccacatcagttaggagttagtctgacaatttgtttataagtgggggcaatcctcacctcacaagccggttttgtgagattgtgttag 23745156  T
Q  694 gtccaaccacaatttttaa 712  Q
    |||||| ||||||||||||    
T  23745155 gtccaatcacaatttttaa 23745137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 598 - 712
Target Start/End: Complemental strand, 29576005 - 29575891
Alignment:
Q  598 ttaagagtcacagatcggatatgatataatctgacaatatgtttataagtggggacaatattcactttacaagtcggttttgtgaggttgtgttaagtcc 697  Q
    ||||||||| || |||||||| || || | |||| ||| |||||||||||| |||||||  |||| | ||||||||||||  |||||||||||||  |||    
T  29576005 ttaagagtctcacatcggataagagatgacctgagaatgtgtttataagtgaggacaattatcacatcacaagtcggtttgctgaggttgtgttagatcc 29575906  T
Q  698 aaccacaatttttaa 712  Q
    |||||||||||||||    
T  29575905 aaccacaatttttaa 29575891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 627 - 712
Target Start/End: Complemental strand, 24063747 - 24063662
Alignment:
Q  627 tctgacaatatgtttataagtggggacaatattcactttacaagtcggttttgtgaggttgtgttaagtccaaccacaatttttaa 712  Q
    ||||||||| ||||||||||||||| ||||  |||| | ||||| |||||||||||| |||||||| |||||| ||||||||||||    
T  24063747 tctgacaatttgtttataagtgggggcaatcctcacctcacaagccggttttgtgagattgtgttaggtccaatcacaatttttaa 24063662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 627 - 712
Target Start/End: Complemental strand, 23691510 - 23691425
Alignment:
Q  627 tctgacaatatgtttataagtggggacaatattcactttacaagtcggttttgtgaggttgtgttaagtccaaccacaatttttaa 712  Q
    ||||||||| ||||||||||||||| ||||  |||| | ||||| ||| |||||||| |||||||| |||||| ||||||||||||    
T  23691510 tctgacaatttgtttataagtgggggcaatcctcacctcacaagccggatttgtgagattgtgttaggtccaatcacaatttttaa 23691425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 596 - 708
Target Start/End: Complemental strand, 12930245 - 12930133
Alignment:
Q  596 tgttaagagtcacagatcggatatgatataatctgacaatatgtttataagtggggacaatattcactttacaagtcggttttgtgaggttgtgttaagt 695  Q
    |||||| |||| || |||||||| || || | |||||||| |||| ||| |||||||||||  |||||| ||||| |||||||||| |||||||||| |     
T  12930245 tgttaaaagtctcacatcggataagagatgacctgacaatgtgttcatatgtggggacaattctcacttcacaagccggttttgtggggttgtgttaggc 12930146  T
Q  696 ccaaccacaattt 708  Q
    |||||||| ||||    
T  12930145 ccaaccaccattt 12930133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 593 - 708
Target Start/End: Complemental strand, 8142767 - 8142652
Alignment:
Q  593 atgtgttaagagtcacagatcggatatgatataatctgacaatatgtttataagtggggacaatattcactttacaagtcggttttgtgaggttgtgtta 692  Q
    ||||||||||||||  | ||||||| ||| || |||||||||||||||||||| | |||  |||  || | |||||| ||||||||||| ||||||||||    
T  8142767 atgtgttaagagtcttatatcggatgtgagatgatctgacaatatgtttataaataggggtaattctcgccttacaaatcggttttgtggggttgtgtta 8142668  T
Q  693 agtccaaccacaattt 708  Q
     ||| |||||| ||||    
T  8142667 ggtctaaccacgattt 8142652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 594 - 713
Target Start/End: Original strand, 9273160 - 9273279
Alignment:
Q  594 tgtgttaagagtcacagatcggatatgatataatctgacaatatgtttataagtggggacaatattcactttacaagtcggttttgtgaggttgtgttaa 693  Q
    ||||||||||||| || ||||| || ||  |  ||||||||| ||||||||||||||| ||||  |||||| |||||  ||||||||| ||||||||||     
T  9273160 tgtgttaagagtcccacatcggttaggaattggtctgacaatttgtttataagtgggggcaatcctcacttcacaagctggttttgtggggttgtgttag 9273259  T
Q  694 gtccaaccacaatttttaat 713  Q
    |  ||||||| |||||||||    
T  9273260 gctcaaccaccatttttaat 9273279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 628 - 715
Target Start/End: Original strand, 11589784 - 11589871
Alignment:
Q  628 ctgacaatatgtttataagtggggacaatattcactttacaagtcggttttgtgaggttgtgttaagtccaaccacaatttttaatat 715  Q
    |||||||| ||||||||||||||| ||||  |||| | ||||| |||||||||| |||||||||| | |||||||| |||| ||||||    
T  11589784 ctgacaatttgtttataagtgggggcaatcctcacctcacaagccggttttgtggggttgtgttaggcccaaccacgatttctaatat 11589871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 594 - 712
Target Start/End: Complemental strand, 20327733 - 20327615
Alignment:
Q  594 tgtgttaagagtcacagatcggatatgatataatctgacaatatgtttataagtggggacaatattcactttacaagtcggttttgtgaggttgtgttaa 693  Q
    |||||||||| || || |||||||| || ||   |||||||| | ||||||||||||| ||||  |||| | ||||| |||||||||| ||||||||||     
T  20327733 tgtgttaagaatcccacatcggataggacatggcctgacaatgtatttataagtgggggcaatcctcacctcacaagccggttttgtggggttgtgttag 20327634  T
Q  694 gtccaaccacaatttttaa 712  Q
    | |||||||| ||||||||    
T  20327633 gcccaaccacgatttttaa 20327615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 628 - 708
Target Start/End: Original strand, 34610559 - 34610640
Alignment:
Q  628 ctgacaatatgtttataagtgggga-caatattcactttacaagtcggttttgtgaggttgtgttaagtccaaccacaattt 708  Q
    ||||||||||||||||||||||||  ||||  |||| | |||||||||||||||| ||||||||||   |||||||||||||    
T  34610559 ctgacaatatgtttataagtggggggcaatcctcacctcacaagtcggttttgtggggttgtgttagacccaaccacaattt 34610640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 628 - 708
Target Start/End: Complemental strand, 1723161 - 1723081
Alignment:
Q  628 ctgacaatatgtttataagtggggacaatattcactttacaagtcggttttgtgaggttgtgttaagtccaaccacaattt 708  Q
    |||||||| ||||||||||||||| ||||  |||| | ||||| |||||||||| |||||||||| | |||||||| ||||    
T  1723161 ctgacaatttgtttataagtgggggcaatcctcacctcacaagccggttttgtggggttgtgttaggcccaaccacgattt 1723081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 628 - 715
Target Start/End: Original strand, 9272960 - 9273047
Alignment:
Q  628 ctgacaatatgtttataagtggggacaatattcactttacaagtcggttttgtgaggttgtgttaagtccaaccacaatttttaatat 715  Q
    |||| ||| ||||||||||||||| |||   |||| | ||||| |||||||||| |||||||||||| |||||||| |||| ||||||    
T  9272960 ctgataatttgtttataagtgggggcaaccctcacctcacaagccggttttgtggggttgtgttaagcccaaccaccatttctaatat 9273047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 628 - 715
Target Start/End: Complemental strand, 20327934 - 20327847
Alignment:
Q  628 ctgacaatatgtttataagtggggacaatattcactttacaagtcggttttgtgaggttgtgttaagtccaaccacaatttttaatat 715  Q
    |||||||| ||||||||||||||| ||||  |||| | ||||| |||||||||| |||||||||| | |||||||  |||| ||||||    
T  20327934 ctgacaatttgtttataagtgggggcaatcctcacctcacaagccggttttgtggggttgtgttaggcccaaccatgatttctaatat 20327847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 594 - 689
Target Start/End: Complemental strand, 23691311 - 23691216
Alignment:
Q  594 tgtgttaagagtcacagatcggatatgatataatctgacaatatgtttataagtggggacaatattcactttacaagtcggttttgtgaggttgtg 689  Q
    ||||||||||||| || ||||| || ||  ||  |||||||| ||||||||||||||| ||||  |||| | ||||| ||||||||||||||||||    
T  23691311 tgtgttaagagtcccacatcggttaggagttagcctgacaatttgtttataagtgggggcaatcctcacctcacaagccggttttgtgaggttgtg 23691216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 594 - 689
Target Start/End: Complemental strand, 23708111 - 23708016
Alignment:
Q  594 tgtgttaagagtcacagatcggatatgatataatctgacaatatgtttataagtggggacaatattcactttacaagtcggttttgtgaggttgtg 689  Q
    ||||||||||||| || ||||| || ||  ||  |||||||| ||||||||||||||| ||||  |||| | ||||| ||||||||||||||||||    
T  23708111 tgtgttaagagtcccacatcggttaggagttagcctgacaatttgtttataagtgggggcaatcctcacctcacaagccggttttgtgaggttgtg 23708016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 594 - 689
Target Start/End: Complemental strand, 23726567 - 23726472
Alignment:
Q  594 tgtgttaagagtcacagatcggatatgatataatctgacaatatgtttataagtggggacaatattcactttacaagtcggttttgtgaggttgtg 689  Q
    ||||||||||||| || ||||| || ||  ||  |||||||| ||||||||||||||| ||||  |||| | ||||| ||||||||||||||||||    
T  23726567 tgtgttaagagtcccacatcggttaggagttagcctgacaatttgtttataagtgggggcaatcctcacctcacaagccggttttgtgaggttgtg 23726472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 594 - 689
Target Start/End: Complemental strand, 23745023 - 23744928
Alignment:
Q  594 tgtgttaagagtcacagatcggatatgatataatctgacaatatgtttataagtggggacaatattcactttacaagtcggttttgtgaggttgtg 689  Q
    ||||||||||||| || ||||| || ||  ||  |||||||| ||||||||||||||| ||||  |||| | ||||| ||||||||||||||||||    
T  23745023 tgtgttaagagtcccacatcggttaggagttagcctgacaatttgtttataagtgggggcaatcctcacctcacaagccggttttgtgaggttgtg 23744928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 594 - 689
Target Start/End: Complemental strand, 24063548 - 24063453
Alignment:
Q  594 tgtgttaagagtcacagatcggatatgatataatctgacaatatgtttataagtggggacaatattcactttacaagtcggttttgtgaggttgtg 689  Q
    ||||||||||||| || ||||| || ||  ||  |||||||| ||||||||||||||| ||||  |||| | ||||| ||||||||||||||||||    
T  24063548 tgtgttaagagtcccacatcggttaggagttagcctgacaatttgtttataagtgggggcaatcctcacctcacaagccggttttgtgaggttgtg 24063453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 596 - 703
Target Start/End: Complemental strand, 38791567 - 38791460
Alignment:
Q  596 tgttaagagtcacagatcggatatgatataatctgacaatatgtttataagtggggacaatattcactttacaagtcggttttgtgaggttgtgttaagt 695  Q
    ||||||||||| || |||||||| || ||  ||||||||| | |||||||||| |||||||  |||| | |||| ||| ||||||| |||||||||| |     
T  38791567 tgttaagagtcccacatcggataggagatggtctgacaatgtatttataagtgaggacaatcctcacctcacaaatcgattttgtggggttgtgttaggc 38791468  T
Q  696 ccaaccac 703  Q
    ||||||||    
T  38791467 ccaaccac 38791460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 596 - 702
Target Start/End: Complemental strand, 17001538 - 17001432
Alignment:
Q  596 tgttaagagtcacagatcggatatgatataatctgacaatatgtttataagtggggacaatattcactttacaagtcggttttgtgaggttgtgttaagt 695  Q
    |||||||||||||| |||||||| ||  |  ||||||||| ||||||||||||||| ||||  |||| | | ||| || ||||||| ||| |||||| ||    
T  17001538 tgttaagagtcacatatcggataggagttcgtctgacaatgtgtttataagtgggggcaatcatcacctcataaggcgattttgtggggtagtgttaggt 17001439  T
Q  696 ccaacca 702  Q
    |||||||    
T  17001438 ccaacca 17001432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 594 - 708
Target Start/End: Complemental strand, 35038313 - 35038199
Alignment:
Q  594 tgtgttaagagtcacagatcggatatgatataatctgacaatatgtttataagtggggacaatattcactttacaagtcggttttgtgaggttgtgttaa 693  Q
    ||||||||||||| || |||||||| |  ||   |||||||| |||||||||||||||  |||  |||| | ||||| |||||||||| ||||||||||     
T  35038313 tgtgttaagagtcccacatcggataggtgatggcctgacaatgtgtttataagtgggggaaatcctcacctcacaagccggttttgtggggttgtgttag 35038214  T
Q  694 gtccaaccacaattt 708  Q
    | |||||||| ||||    
T  35038213 gcccaaccacgattt 35038199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 634 - 708
Target Start/End: Original strand, 45828024 - 45828098
Alignment:
Q  634 atatgtttataagtggggacaatattcactttacaagtcggttttgtgaggttgtgttaagtccaaccacaattt 708  Q
    |||||||||||||| ||| ||||  |||| | ||||| ||||||||||||||||||||| | || ||||||||||    
T  45828024 atatgtttataagttggggcaatcctcacctcacaagccggttttgtgaggttgtgttaggccctaccacaattt 45828098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 595 - 708
Target Start/End: Original strand, 16239557 - 16239670
Alignment:
Q  595 gtgttaagagtcacagatcggatatgatataatctgacaatatgtttataagtggggacaatattcactttacaagtcggttttgtgaggttgtgttaag 694  Q
    |||||||||||| || |||||||| || ||   |||||||| ||||||||||||||| |||   |||| | ||||| |||||||||| | |||||||| |    
T  16239557 gtgttaagagtctcacatcggataggacatggcctgacaatgtgtttataagtgggggcaaacctcacctcacaagccggttttgtgggattgtgttagg 16239656  T
Q  695 tccaaccacaattt 708  Q
     |||||||| ||||    
T  16239657 cccaaccacgattt 16239670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 666 - 715
Target Start/End: Complemental strand, 20303432 - 20303383
Alignment:
Q  666 acaagtcggttttgtgaggttgtgttaagtccaaccacaatttttaatat 715  Q
    ||||| |||||||||| |||||||||| ||||||||||||||| ||||||    
T  20303432 acaagccggttttgtggggttgtgttaggtccaaccacaatttctaatat 20303383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 639 - 708
Target Start/End: Complemental strand, 21717423 - 21717354
Alignment:
Q  639 tttataagtggggacaatattcactttacaagtcggttttgtgaggttgtgttaagtccaaccacaattt 708  Q
    |||||||||||||  ||| |  || ||||||||||||||||||||||||||||  | |||||||||||||    
T  21717423 tttataagtgggggtaatctctaccttacaagtcggttttgtgaggttgtgttcggcccaaccacaattt 21717354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 596 - 708
Target Start/End: Complemental strand, 7697514 - 7697403
Alignment:
Q  596 tgttaagagtcacagatcggatatgatataatctgacaatatgtttataagtggggacaatattcactttacaagtcggttttgtgaggttgtgttaagt 695  Q
    ||||||||||| || |||||||| || || | | ||||||||||| |||||||||| ||||  |||| | |||||  ||||||||| |||||||||| |     
T  7697514 tgttaagagtcccacatcggataggagatgaccagacaatatgtt-ataagtgggggcaatcatcacctcacaagctggttttgtggggttgtgttaggc 7697416  T
Q  696 ccaaccacaattt 708  Q
    | |||||||||||    
T  7697415 ctaaccacaattt 7697403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 628 - 708
Target Start/End: Original strand, 8018967 - 8019047
Alignment:
Q  628 ctgacaatatgtttataagtggggacaatattcactttacaagtcggttttgtgaggttgtgttaagtccaaccacaattt 708  Q
    |||| ||| ||||||||||||||  ||||  |||| | ||||| |||||||||| |||||||||| | |||||||||||||    
T  8018967 ctgaaaatttgtttataagtgggtgcaatcctcacctcacaagccggttttgtggggttgtgttaggcccaaccacaattt 8019047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 628 - 708
Target Start/End: Original strand, 43781582 - 43781662
Alignment:
Q  628 ctgacaatatgtttataagtggggacaatattcactttacaagtcggttttgtgaggttgtgttaagtccaaccacaattt 708  Q
    ||||||||  |||||||||||| | ||||  |||||| |||||||||||||||   ||||||||| | |||||||||||||    
T  43781582 ctgacaatgagtttataagtggaggcaatcctcacttcacaagtcggttttgtagagttgtgttaggcccaaccacaattt 43781662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 596 - 708
Target Start/End: Original strand, 54567859 - 54567971
Alignment:
Q  596 tgttaagagtcacagatcggatatgatataatctgacaatatgtttataagtggggacaatattcactttacaagtcggttttgtgaggttgtgttaagt 695  Q
    |||||||||||  | |||||||| || ||   |||||||| |||||||||||||||  |||  |||| | ||||| |||||||||| |||||||||| |     
T  54567859 tgttaagagtcctatatcggataggacatggcctgacaatgtgtttataagtgggggaaatcctcacctcacaagccggttttgtggggttgtgttaggc 54567958  T
Q  696 ccaaccacaattt 708  Q
    |||||||| ||||    
T  54567959 ccaaccacgattt 54567971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 637 - 716
Target Start/End: Original strand, 31556308 - 31556387
Alignment:
Q  637 tgtttataagtggggacaatattcactttacaagtcggttttgtgaggttgtgttaagtccaaccacaatttttaatata 716  Q
    ||||||||| |||||||| |  |||||||  |||||||||||||||  || ||| |||||||| |||||||| |||||||    
T  31556308 tgtttataaatggggacattcatcactttttaagtcggttttgtgatattatgtcaagtccaaacacaatttctaatata 31556387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 628 - 703
Target Start/End: Complemental strand, 35038513 - 35038438
Alignment:
Q  628 ctgacaatatgtttataagtggggacaatattcactttacaagtcggttttgtgaggttgtgttaagtccaaccac 703  Q
    |||||||| ||||||||||||||| ||||  |||| | |||||  ||||||||| |||||||||| | ||||||||    
T  35038513 ctgacaatgtgtttataagtgggggcaatcctcacctgacaagctggttttgtggggttgtgttaggcccaaccac 35038438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 637 - 715
Target Start/End: Complemental strand, 13574997 - 13574919
Alignment:
Q  637 tgtttataagtggggacaatattcactttacaagtcggttttgtgaggttgtgttaagtccaaccacaatttttaatat 715  Q
    |||||||||||||||  |||  |||| | ||||| | |||||||| |||||||||| | ||||||||||||| ||||||    
T  13574997 tgtttataagtgggggaaatcctcacctcacaagccagttttgtggggttgtgttaggcccaaccacaatttctaatat 13574919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 594 - 712
Target Start/End: Complemental strand, 20303183 - 20303065
Alignment:
Q  594 tgtgttaagagtcacagatcggatatgatataatctgacaatatgtttataagtggggacaatattcactttacaagtcggttttgtgaggttgtgttaa 693  Q
    |||||||||| || || ||||||||||| ||   |||||||| | ||||||||||||| ||||  |||| | ||||  |||||||||| | ||||||||     
T  20303183 tgtgttaagaatcccacatcggatatgacatggcctgacaatgtatttataagtgggggcaatcctcacctcacaaaccggttttgtgggattgtgttag 20303084  T
Q  694 gtccaaccacaatttttaa 712  Q
    |  ||||||| ||||||||    
T  20303083 gctcaaccacgatttttaa 20303065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 594 - 708
Target Start/End: Original strand, 31317431 - 31317545
Alignment:
Q  594 tgtgttaagagtcacagatcggatatgatataatctgacaatatgtttataagtggggacaatattcactttacaagtcggttttgtgaggttgtgttaa 693  Q
    |||||||||||||  | |||||||| || || |  ||||||| |||||||||||||||| |||  |||| | ||||| || ||||| | ||||||||||     
T  31317431 tgtgttaagagtcctacatcggataggacatgacatgacaatgtgtttataagtggggaaaatcatcacctcacaagccgattttgcggggttgtgttag 31317530  T
Q  694 gtccaaccacaattt 708  Q
    | |||||||| ||||    
T  31317531 gcccaaccacgattt 31317545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 595 - 652
Target Start/End: Complemental strand, 3975476 - 3975419
Alignment:
Q  595 gtgttaagagtcacagatcggatatgatataatctgacaatatgtttataagtgggga 652  Q
    ||||||||||||||  |||||||| |  |||| |||||||| ||||||||||||||||    
T  3975476 gtgttaagagtcacgcatcggataggtgataacctgacaatgtgtttataagtgggga 3975419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 48; Significance: 5e-18; HSPs: 46)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 628 - 715
Target Start/End: Complemental strand, 2544532 - 2544445
Alignment:
Q  628 ctgacaatatgtttataagtggggacaatattcactttacaagtcggttttgtgaggttgtgttaagtccaaccacaatttttaatat 715  Q
    |||||||| ||||||||||||||| ||||  |||| | |||||||||||||||| |||||||||| | |||||||| |||||||||||    
T  2544532 ctgacaatttgtttataagtgggggcaatcctcacctcacaagtcggttttgtggggttgtgttaggcccaaccacgatttttaatat 2544445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 627 - 712
Target Start/End: Original strand, 2401358 - 2401443
Alignment:
Q  627 tctgacaatatgtttataagtggggacaatattcactttacaagtcggttttgtgaggttgtgttaagtccaaccacaatttttaa 712  Q
    ||||||||| |||||||||||| ||||||| ||||||| |||||||| ||||||||| |||||||| |  ||||||| ||||||||    
T  2401358 tctgacaatgtgtttataagtgtggacaatcttcacttcacaagtcgattttgtgagattgtgttaggctcaaccacgatttttaa 2401443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 596 - 708
Target Start/End: Original strand, 28080632 - 28080743
Alignment:
Q  596 tgttaagagtcacagatcggatatgatataatctgacaatatgtttataagtggggacaatattcactttacaagtcggttttgtgaggttgtgttaagt 695  Q
    ||||||||||| || |||||||| || || | |||||||| ||||||||||| ||| |||| ||||||| |||||||||||||||| |||| |||||  |    
T  28080632 tgttaagagtctcacatcggataagagatgacctgacaatgtgtttataagtaggg-caattttcacttcacaagtcggttttgtggggttatgttagat 28080730  T
Q  696 ccaaccacaattt 708  Q
    |||||||| ||||    
T  28080731 ccaaccacgattt 28080743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 596 - 704
Target Start/End: Original strand, 41190981 - 41191089
Alignment:
Q  596 tgttaagagtcacagatcggatatgatataatctgacaatatgtttataagtggggacaatattcactttacaagtcggttttgtgaggttgtgttaagt 695  Q
    ||||||||||| || ||| ||||||  |||||||||||||||||||||||||| |  ||||  |||| | ||||| |||||||||||| |||||||| ||    
T  41190981 tgttaagagtcccacatcagatatgtgataatctgacaatatgtttataagtgagagcaatcctcacatcacaagccggttttgtgagattgtgttaggt 41191080  T
Q  696 ccaaccaca 704  Q
    |||| ||||    
T  41191081 ccaatcaca 41191089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 627 - 714
Target Start/End: Complemental strand, 2544301 - 2544214
Alignment:
Q  627 tctgacaatatgtttataagtggggacaatattcactttacaagtcggttttgtgaggttgtgttaagtccaaccacaatttttaata 714  Q
    ||||||||| ||||||||||||||| |||| ||||| ||||||| | |||||||| |||||||||| | || ||||| ||||||||||    
T  2544301 tctgacaatttgtttataagtgggggcaatcttcaccttacaagccagttttgtggggttgtgttaggccctaccacgatttttaata 2544214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 593 - 708
Target Start/End: Complemental strand, 26240036 - 26239921
Alignment:
Q  593 atgtgttaagagtcacagatcggatatgatataatctgacaatatgtttataagtggggacaatattcactttacaagtcggttttgtgaggttgtgtta 692  Q
    ||||||||||||||  | |||||||| || ||  ||||||||| ||||||||||||||| ||||  |||| | |||||||||| ||||| ||||||||||    
T  26240036 atgtgttaagagtccgacatcggataggacatggtctgacaatgtgtttataagtgggggcaatcctcacctcacaagtcggtattgtggggttgtgtta 26239937  T
Q  693 agtccaaccacaattt 708  Q
       |||||||||||||    
T  26239936 gacccaaccacaattt 26239921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 628 - 715
Target Start/End: Original strand, 29469604 - 29469691
Alignment:
Q  628 ctgacaatatgtttataagtggggacaatattcactttacaagtcggttttgtgaggttgtgttaagtccaaccacaatttttaatat 715  Q
    |||||||| ||||||||||||||| ||||  |||| ||||||| |||||||||| |||||||||| | |||||||| |||| ||||||    
T  29469604 ctgacaatgtgtttataagtgggggcaatcctcaccttacaagccggttttgtggggttgtgttaggcccaaccacgatttctaatat 29469691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 594 - 715
Target Start/End: Original strand, 29469805 - 29469926
Alignment:
Q  594 tgtgttaagagtcacagatcggatatgatataatctgacaatatgtttataagtggggacaatattcactttacaagtcggttttgtgaggttgtgttaa 693  Q
    ||||||||||||| || |||||| | || ||   |||||||| ||||||||||||||| ||||  |||| ||||||| ||||||||||  |||||||||     
T  29469805 tgtgttaagagtcccacatcggacaggacatggcctgacaatgtgtttataagtgggggcaatcctcaccttacaagccggttttgtggagttgtgttag 29469904  T
Q  694 gtccaaccacaatttttaatat 715  Q
    | |||||||| |||| ||||||    
T  29469905 gcccaaccacgatttctaatat 29469926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 628 - 708
Target Start/End: Complemental strand, 21055038 - 21054958
Alignment:
Q  628 ctgacaatatgtttataagtggggacaatattcactttacaagtcggttttgtgaggttgtgttaagtccaaccacaattt 708  Q
    |||||||||||||||||||||||| ||||  |||| | ||||| |||||||||| |||||||||| | |||||||| ||||    
T  21055038 ctgacaatatgtttataagtgggggcaatcctcacctcacaagccggttttgtggggttgtgttaggcccaaccaccattt 21054958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 628 - 715
Target Start/End: Original strand, 17202178 - 17202265
Alignment:
Q  628 ctgacaatatgtttataagtggggacaatattcactttacaagtcggttttgtgaggttgtgttaagtccaaccacaatttttaatat 715  Q
    |||||||| ||||||||||||||| ||||  |||  | ||||| |||||||||| |||||||||| | |||||||| |||||||||||    
T  17202178 ctgacaatttgtttataagtgggggcaattctcatctcacaagccggttttgtggggttgtgttaggcccaaccacgatttttaatat 17202265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 628 - 715
Target Start/End: Original strand, 34027392 - 34027479
Alignment:
Q  628 ctgacaatatgtttataagtggggacaatattcactttacaagtcggttttgtgaggttgtgttaagtccaaccacaatttttaatat 715  Q
    |||||||| ||||||||||||||| ||||  |||| | ||||| |||||||||| |||||||||| | |||||||| |||| ||||||    
T  34027392 ctgacaatttgtttataagtgggggcaatcctcacctcacaagccggttttgtggggttgtgttaggcccaaccacgatttctaatat 34027479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 594 - 708
Target Start/End: Complemental strand, 48243178 - 48243066
Alignment:
Q  594 tgtgttaagagtcacagatcggatatgatataatctgacaatatgtttataagtggggacaatattcactttacaagtcggttttgtgaggttgtgttaa 693  Q
    ||||||||||||| || ||| ||||||||    ||||||||| ||||||||||||||| ||||  |||| | ||||| |||||||||| ||||||||||     
T  48243178 tgtgttaagagtcccacatcagatatgatgg--tctgacaatgtgtttataagtgggggcaatcctcacctcacaagccggttttgtggggttgtgttag 48243081  T
Q  694 gtccaaccacaattt 708  Q
    | |||||||| ||||    
T  48243080 gcccaaccacgattt 48243066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 627 - 692
Target Start/End: Complemental strand, 32278971 - 32278906
Alignment:
Q  627 tctgacaatatgtttataagtggggacaatattcactttacaagtcggttttgtgaggttgtgtta 692  Q
    ||||||||| ||||||||||||||||||||  |||| | | ||| |||||||||||||||||||||    
T  32278971 tctgacaatgtgtttataagtggggacaatcgtcacctcataagccggttttgtgaggttgtgtta 32278906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 628 - 708
Target Start/End: Original strand, 21861528 - 21861608
Alignment:
Q  628 ctgacaatatgtttataagtggggacaatattcactttacaagtcggttttgtgaggttgtgttaagtccaaccacaattt 708  Q
    |||||||| ||||||||||||||| ||||  |||| ||||||| || ||||||| |||||||||| | |||||||| ||||    
T  21861528 ctgacaatgtgtttataagtgggggcaatcctcaccttacaagccgattttgtggggttgtgttaggcccaaccaccattt 21861608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 628 - 708
Target Start/End: Original strand, 25620135 - 25620215
Alignment:
Q  628 ctgacaatatgtttataagtggggacaatattcactttacaagtcggttttgtgaggttgtgttaagtccaaccacaattt 708  Q
    |||||||| ||||||||||||||| ||||  |||| | ||||| |||||||||| |||||||||| | |||||||| ||||    
T  25620135 ctgacaatgtgtttataagtgggggcaatcctcacctcacaagccggttttgtggggttgtgttaggcccaaccacgattt 25620215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 628 - 692
Target Start/End: Original strand, 34027626 - 34027690
Alignment:
Q  628 ctgacaatatgtttataagtggggacaatattcactttacaagtcggttttgtgaggttgtgtta 692  Q
    |||||||| ||||||||||||||| ||||  |||||| ||||| |||||||||| ||||||||||    
T  34027626 ctgacaatttgtttataagtgggggcaatcctcacttcacaagccggttttgtggggttgtgtta 34027690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 596 - 692
Target Start/End: Complemental strand, 42985240 - 42985144
Alignment:
Q  596 tgttaagagtcacagatcggatatgatataatctgacaatatgtttataagtggggacaatattcactttacaagtcggttttgtgaggttgtgtta 692  Q
    ||||||||||| || ||||||||||  ||  | ||||||| ||||||||||||| | ||||  |||| | |||||||| ||||||||||||||||||    
T  42985240 tgttaagagtctcacatcggatatgtgatggtttgacaatgtgtttataagtggaggcaatcctcacctcacaagtcgattttgtgaggttgtgtta 42985144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 637 - 712
Target Start/End: Original strand, 8075867 - 8075942
Alignment:
Q  637 tgtttataagtggggacaatattcactttacaagtcggttttgtgaggttgtgttaagtccaaccacaatttttaa 712  Q
    |||||||||||||||| ||| ||||| | ||||||||||||| ||  ||||||| | |||||||||| ||||||||    
T  8075867 tgtttataagtggggataatcttcacctcacaagtcggttttatggagttgtgtcaggtccaaccacgatttttaa 8075942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 628 - 715
Target Start/End: Complemental strand, 26562158 - 26562071
Alignment:
Q  628 ctgacaatatgtttataagtggggacaatattcactttacaagtcggttttgtgaggttgtgttaagtccaaccacaatttttaatat 715  Q
    |||||||| ||||||||||||||| |||| ||||| | ||||| |||||||||| |||| ||||| |  ||||||| |||| ||||||    
T  26562158 ctgacaatttgtttataagtgggggcaatcttcacctcacaagccggttttgtggggttatgttaggctcaaccaccatttctaatat 26562071  T

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Target: chr7; HSP #20
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 629 - 708
Target Start/End: Original strand, 31892387 - 31892466
Alignment:
Q  629 tgacaatatgtttataagtggggacaatattcactttacaagtcggttttgtgaggttgtgttaagtccaaccacaattt 708  Q
    ||||||| | |||||||||||||||||| ||||| | ||||| |||||||||| || ||||||| | |||||||| ||||    
T  31892387 tgacaatgtatttataagtggggacaatcttcacctcacaagccggttttgtggggatgtgttaggcccaaccacgattt 31892466  T

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Target: chr7; HSP #21
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 596 - 702
Target Start/End: Complemental strand, 3038201 - 3038095
Alignment:
Q  596 tgttaagagtcacagatcggatatgatataatctgacaatatgtttataagtggggacaatattcactttacaagtcggttttgtgaggttgtgttaagt 695  Q
    ||||||||||| || |||| ||| || ||  ||| ||||| ||||||||||||||| ||||  |||| | ||||| |||||||||| |||||||||| |     
T  3038201 tgttaagagtcccacatcgaataagagattgtctaacaatgtgtttataagtgggggcaatcctcacgtcacaagccggttttgtggggttgtgttaggc 3038102  T
Q  696 ccaacca 702  Q
    |||||||    
T  3038101 ccaacca 3038095  T

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Target: chr7; HSP #22
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 594 - 707
Target Start/End: Original strand, 1596793 - 1596906
Alignment:
Q  594 tgtgttaagagtcacagatcggatatgatataatctgacaatatgtttataagtggggacaatattcactttacaagtcggttttgtgaggttgtgttaa 693  Q
    ||||||||||||| || |||||| | || ||   || ||||| | ||||||||||||| ||||  |||| ||||||| |||||||||  ||||||||||     
T  1596793 tgtgttaagagtcccacatcggacaggacatggcctaacaatgtttttataagtgggggcaatcctcaccttacaagccggttttgtagggttgtgttag 1596892  T
Q  694 gtccaaccacaatt 707  Q
    | ||||||||||||    
T  1596893 gcccaaccacaatt 1596906  T

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Target: chr7; HSP #23
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 595 - 708
Target Start/End: Original strand, 3392948 - 3393061
Alignment:
Q  595 gtgttaagagtcacagatcggatatgatataatctgacaatatgtttataagtggggacaatattcactttacaagtcggttttgtgaggttgtgttaag 694  Q
    |||||||||||| || |||||||| |  ||   |||||||| |||||||||||||||| |||  |||| | ||||| || ||||||| |||||||||| |    
T  3392948 gtgttaagagtctcacatcggataggtgatggcctgacaatgtgtttataagtggggaaaattctcacctcacaagccgattttgtggggttgtgttagg 3393047  T
Q  695 tccaaccacaattt 708  Q
     |||||||| ||||    
T  3393048 cccaaccaccattt 3393061  T

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Target: chr7; HSP #24
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 639 - 708
Target Start/End: Complemental strand, 33996385 - 33996316
Alignment:
Q  639 tttataagtggggacaatattcactttacaagtcggttttgtgaggttgtgttaagtccaaccacaattt 708  Q
    ||||||||||||| |||| ||||| | ||||||||||||||||  ||||||||| | |||||||| ||||    
T  33996385 tttataagtgggggcaatcttcacctcacaagtcggttttgtggagttgtgttaggcccaaccacgattt 33996316  T

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Target: chr7; HSP #25
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 595 - 692
Target Start/End: Complemental strand, 36277344 - 36277247
Alignment:
Q  595 gtgttaagagtcacagatcggatatgatataatctgacaatatgtttataagtggggacaatattcactttacaagtcggttttgtgaggttgtgtta 692  Q
    |||||||||||| || |||||| | || ||   |||||||| ||||||||||||||| ||||  |||| | |||||||| ||||||| ||||||||||    
T  36277344 gtgttaagagtctcacatcggacaagacatggcctgacaatgtgtttataagtgggggcaatcctcacctcacaagtcgattttgtggggttgtgtta 36277247  T

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Target: chr7; HSP #26
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 627 - 712
Target Start/End: Original strand, 5522877 - 5522964
Alignment:
Q  627 tctgacaatatgtttataagtggggacaatattcactttacaagtcggt--tttgtgaggttgtgttaagtccaaccacaatttttaa 712  Q
    ||||||||| ||||| ||||||||  |||| ||||| | ||||| ||||  ||||||||||||||||| | |||||||| ||||||||    
T  5522877 tctgacaatgtgtttttaagtgggagcaatcttcacctcacaagccggtattttgtgaggttgtgttacgcccaaccacgatttttaa 5522964  T

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Target: chr7; HSP #27
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 627 - 707
Target Start/End: Original strand, 9625411 - 9625491
Alignment:
Q  627 tctgacaatatgtttataagtggggacaatattcactttacaagtcggttttgtgaggttgtgttaagtccaaccacaatt 707  Q
    ||||||||||| |||||||||||||| |||  |||| | |||||  ||||||| | ||||| |||||| ||||||||||||    
T  9625411 tctgacaatatatttataagtggggataatcctcacctcacaaggtggttttgcggggttgagttaagaccaaccacaatt 9625491  T

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Target: chr7; HSP #28
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 628 - 708
Target Start/End: Original strand, 21861293 - 21861373
Alignment:
Q  628 ctgacaatatgtttataagtggggacaatattcactttacaagtcggttttgtgaggttgtgttaagtccaaccacaattt 708  Q
    |||||||| |||||||||||| || ||||  |||| ||||||| |||||||||| | |||||||| | |||||||| ||||    
T  21861293 ctgacaatgtgtttataagtgagggcaatcctcaccttacaagccggttttgtgggattgtgttaggcccaaccaccattt 21861373  T

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Target: chr7; HSP #29
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 627 - 715
Target Start/End: Complemental strand, 31257353 - 31257265
Alignment:
Q  627 tctgacaatatgtttataagtggggacaatattcactttacaagtcggttttgtgaggttgtgttaagtccaaccacaatttttaatat 715  Q
    ||||||||| | ||||||||||||| ||||  | | || ||||| |||||||||| |||||||||| | |||||||| |||| ||||||    
T  31257353 tctgacaatttatttataagtgggggcaatccttaattcacaagccggttttgtggggttgtgttaggcccaaccacgatttctaatat 31257265  T

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Target: chr7; HSP #30
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 628 - 708
Target Start/End: Complemental strand, 31485744 - 31485664
Alignment:
Q  628 ctgacaatatgtttataagtggggacaatattcactttacaagtcggttttgtgaggttgtgttaagtccaaccacaattt 708  Q
    |||||||| | ||||||||||||| ||||  |||| | ||||| ||||||||||| ||||||||| | | |||||||||||    
T  31485744 ctgacaatgtttttataagtgggggcaatcctcacctgacaagccggttttgtgaagttgtgttaggcctaaccacaattt 31485664  T

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Target: chr7; HSP #31
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 628 - 692
Target Start/End: Complemental strand, 48243522 - 48243458
Alignment:
Q  628 ctgacaatatgtttataagtggggacaatattcactttacaagtcggttttgtgaggttgtgtta 692  Q
    |||||||| ||||||||||||||| ||||  |||  ||||||| |||||||||| ||||||||||    
T  48243522 ctgacaatgtgtttataagtgggggcaatcctcatcttacaagccggttttgtggggttgtgtta 48243458  T

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Target: chr7; HSP #32
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 633 - 680
Target Start/End: Original strand, 4507169 - 4507216
Alignment:
Q  633 aatatgtttataagtggggacaatattcactttacaagtcggttttgt 680  Q
    |||||||||||||||||||||||| ||||||| |||||  ||||||||    
T  4507169 aatatgtttataagtggggacaatcttcacttcacaagctggttttgt 4507216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 628 - 715
Target Start/End: Original strand, 40746264 - 40746351
Alignment:
Q  628 ctgacaatatgtttataagtggggacaatattcactttacaagtcggttttgtgaggttgtgttaagtccaaccacaatttttaatat 715  Q
    |||||||| |||||||||||| || ||||  |||| | | ||| || ||||||| |||||||||| | ||||||||||||| ||||||    
T  40746264 ctgacaatttgtttataagtgagggcaatcctcacctcataagccgattttgtggggttgtgttaggcccaaccacaatttctaatat 40746351  T

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Target: chr7; HSP #34
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 637 - 712
Target Start/End: Complemental strand, 40898791 - 40898716
Alignment:
Q  637 tgtttataagtggggacaatattcactttacaagtcggttttgtgaggttgtgttaagtccaaccacaatttttaa 712  Q
    ||||||||||||||| ||||  |||| ||||||  || |||||||  ||||||||  |||||||||||||||||||    
T  40898791 tgtttataagtgggggcaatcctcaccttacaaaccgattttgtggagttgtgtttggtccaaccacaatttttaa 40898716  T

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Target: chr7; HSP #35
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 637 - 708
Target Start/End: Complemental strand, 43085613 - 43085542
Alignment:
Q  637 tgtttataagtggggacaatattcactttacaagtcggttttgtgaggttgtgttaagtccaaccacaattt 708  Q
    ||||||||||||||| ||||  |||| | |||||| ||||||||| ||||||||||||  ||||||| ||||    
T  43085613 tgtttataagtgggggcaatcctcacctcacaagttggttttgtggggttgtgttaagctcaaccacgattt 43085542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 597 - 708
Target Start/End: Complemental strand, 44874462 - 44874351
Alignment:
Q  597 gttaagagtcacagatcggatatgatataatctgacaatatgtttataagtggggacaatattcactttacaagtcggttttgtgaggttgtgttaagtc 696  Q
    |||||||||| || |||||||| || |||| |||||||| |||||||||||||||  |||  |||| | ||||  || ||||||  |||||||||| | |    
T  44874462 gttaagagtcccacatcggataggagataacctgacaatgtgtttataagtgggggaaatcctcacctcacaaaccgattttgtatggttgtgttaggcc 44874363  T
Q  697 caaccacaattt 708  Q
    ||||||| ||||    
T  44874362 caaccacgattt 44874351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 596 - 715
Target Start/End: Complemental strand, 48661672 - 48661553
Alignment:
Q  596 tgttaagagtcacagatcggatatgatataatctgacaatatgtttataagtggggacaatattcactttacaagtcggttttgtgaggttgtgttaagt 695  Q
    ||||||||||| || ||| |||| || || | |||||||| | |||||| |||||| ||||  |||| | ||||| |||||||||||| ||||||||       
T  48661672 tgttaagagtcccacatcagataggagatgacctgacaatgtatttataggtgggggcaatcctcacctcacaagccggttttgtgagattgtgttagac 48661573  T
Q  696 ccaaccacaatttttaatat 715  Q
    |||||||| |||| ||||||    
T  48661572 ccaaccacgatttctaatat 48661553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 594 - 656
Target Start/End: Complemental strand, 6001554 - 6001492
Alignment:
Q  594 tgtgttaagagtcacagatcggatatgatataatctgacaatatgtttataagtggggacaat 656  Q
    ||||||||||||| || ||||||||  | || | |||||||||||||||||||||||| ||||    
T  6001554 tgtgttaagagtcccacatcggatagaagatgacctgacaatatgtttataagtgggggcaat 6001492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 594 - 656
Target Start/End: Complemental strand, 36277110 - 36277048
Alignment:
Q  594 tgtgttaagagtcacagatcggatatgatataatctgacaatatgtttataagtggggacaat 656  Q
    ||||||||||||| || ||| || |||  ||| ||||||||| ||||||||||||||||||||    
T  36277110 tgtgttaagagtctcacatcagacatggcatagtctgacaatgtgtttataagtggggacaat 36277048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 637 - 686
Target Start/End: Complemental strand, 10420928 - 10420880
Alignment:
Q  637 tgtttataagtggggacaatattcactttacaagtcggttttgtgaggtt 686  Q
    ||||||||||||||| |||| ||| |||||||||||||||||||| ||||    
T  10420928 tgtttataagtgggg-caatcttcgctttacaagtcggttttgtggggtt 10420880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 631 - 692
Target Start/End: Complemental strand, 23839159 - 23839098
Alignment:
Q  631 acaatatgtttataagtggggacaatattcactttacaagtcggttttgtgaggttgtgtta 692  Q
    ||||| |||||||||||||||  |||  |||| | ||||| |||||||||||||||||||||    
T  23839159 acaatctgtttataagtgggggaaatcctcacctcacaagccggttttgtgaggttgtgtta 23839098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 627 - 692
Target Start/End: Complemental strand, 31257117 - 31257052
Alignment:
Q  627 tctgacaatatgtttataagtggggacaatattcactttacaagtcggttttgtgaggttgtgtta 692  Q
    ||||||||| ||||||||||||||| |||| ||||| | ||||  | |||||||| ||||||||||    
T  31257117 tctgacaatttgtttataagtgggggcaatcttcacctcacaaaccagttttgtggggttgtgtta 31257052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 628 - 709
Target Start/End: Complemental strand, 31485509 - 31485429
Alignment:
Q  628 ctgacaatatgtttataagtggggacaatattcactttacaagtcggttttgtgaggttgtgttaagtccaaccacaatttt 709  Q
    |||||||| ||||||||||||||| ||||  |||| | ||||   ||||||||||||||||||| || |||||||| |||||    
T  31485509 ctgacaatgtgtttataagtgggggcaatcctcacatcacaaactggttttgtgaggttgtgtt-aggccaaccacgatttt 31485429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 596 - 681
Target Start/End: Original strand, 31892118 - 31892203
Alignment:
Q  596 tgttaagagtcacagatcggatatgatataatctgacaatatgtttataagtggggacaatattcactttacaagtcggttttgtg 681  Q
    |||||| |||| || |||||||| ||||||   ||||||| | ||||||||||||||||||  |||| | ||||| ||||||||||    
T  31892118 tgttaaaagtcccacatcggataggatatagcatgacaatgtatttataagtggggacaatcctcacctcacaagccggttttgtg 31892203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 631 - 708
Target Start/End: Original strand, 47710445 - 47710522
Alignment:
Q  631 acaatatgtttataagtggggacaatattcactttacaagtcggttttgtgaggttgtgttaagtccaaccacaattt 708  Q
    ||||| ||||||||||||||| ||||  |||| | ||||| | |||||||| |||||||||| | |||||||| ||||    
T  47710445 acaatgtgtttataagtgggggcaatcctcacctcacaagccagttttgtggggttgtgttaggcccaaccaccattt 47710522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 631 - 708
Target Start/End: Original strand, 47722101 - 47722178
Alignment:
Q  631 acaatatgtttataagtggggacaatattcactttacaagtcggttttgtgaggttgtgttaagtccaaccacaattt 708  Q
    ||||| ||||||||||||||| ||||  |||| | ||||| | |||||||| |||||||||| | |||||||| ||||    
T  47722101 acaatgtgtttataagtgggggcaatcctcacctcacaagccagttttgtggggttgtgttaggcccaaccaccattt 47722178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 48; Significance: 5e-18; HSPs: 32)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 628 - 715
Target Start/End: Complemental strand, 21210006 - 21209919
Alignment:
Q  628 ctgacaatatgtttataagtggggacaatattcactttacaagtcggttttgtgaggttgtgttaagtccaaccacaatttttaatat 715  Q
    |||||||| ||||||||||||||||||||  |||| | ||||| |||||||||| |||||||||||| |||||||| |||| ||||||    
T  21210006 ctgacaatttgtttataagtggggacaattctcacctcacaagccggttttgtggggttgtgttaagcccaaccacgatttctaatat 21209919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 594 - 702
Target Start/End: Complemental strand, 95385 - 95277
Alignment:
Q  594 tgtgttaagagtcacagatcggatatgatataatctgacaatatgtttataagtggggacaatattcactttacaagtcggttttgtgaggttgtgttaa 693  Q
    |||||||||||||||| |||||||| |  || | |||||||| ||||||||||||||||||||  |||  | ||||| |||||||||| ||||||||||     
T  95385 tgtgttaagagtcacacatcggataggtgatgacctgacaatgtgtttataagtggggacaatcctcatctcacaagccggttttgtggggttgtgttag 95286  T
Q  694 gtccaacca 702  Q
    | |||||||    
T  95285 gcccaacca 95277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 627 - 715
Target Start/End: Complemental strand, 24487731 - 24487643
Alignment:
Q  627 tctgacaatatgtttataagtggggacaatattcactttacaagtcggttttgtgaggttgtgttaagtccaaccacaatttttaatat 715  Q
    ||||| |||||||||||||||||||  |||  |||| | ||||| ||||||||||||||||||||||| |||||||| |||| ||||||    
T  24487731 tctgaaaatatgtttataagtgggggtaatcctcacctcacaagccggttttgtgaggttgtgttaagcccaaccacgatttctaatat 24487643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 596 - 708
Target Start/End: Complemental strand, 2063850 - 2063739
Alignment:
Q  596 tgttaagagtcacagatcggatatgatataatctgacaatatgtttataagtggggacaatattcactttacaagtcggttttgtgaggttgtgttaagt 695  Q
    ||||||||||| || ||||||||  | ||  ||||||||| ||||||||||||||| ||||  |||||  |||||||||||||||| |||||||||| |     
T  2063850 tgttaagagtcccacatcggatagaacatggtctgacaatgtgtttataagtgggggcaatcctcactc-acaagtcggttttgtggggttgtgttaggc 2063752  T
Q  696 ccaaccacaattt 708  Q
    |||||||| ||||    
T  2063751 ccaaccacgattt 2063739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 596 - 712
Target Start/End: Complemental strand, 6919544 - 6919430
Alignment:
Q  596 tgttaagagtcacagatcggatatgatataatctgacaatatgtttataagtggggacaatattcactttacaagtcggttttgtgaggttgtgttaagt 695  Q
    ||||||||||| || || |||||||| || || ||||||| ||||||||||||||||||||  |||| | ||||| | ||||||||||||||||||| |     
T  6919544 tgttaagagtctcacataggatatgagatgat-tgacaatgtgtttataagtggggacaattctcacctcacaag-cagttttgtgaggttgtgttaggc 6919447  T
Q  696 ccaaccacaatttttaa 712  Q
     ||||||| ||||||||    
T  6919446 tcaaccacgatttttaa 6919430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 628 - 712
Target Start/End: Complemental strand, 33337323 - 33337239
Alignment:
Q  628 ctgacaatatgtttataagtggggacaatattcactttacaagtcggttttgtgaggttgtgttaagtccaaccacaatttttaa 712  Q
    |||||||||||||||||||||||| ||||  |||| | ||||  || |||||||| | |||||||||||||||||| ||||||||    
T  33337323 ctgacaatatgtttataagtgggggcaatcatcacctcacaaaccgattttgtgaagctgtgttaagtccaaccacgatttttaa 33337239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 612 - 692
Target Start/End: Complemental strand, 38731939 - 38731859
Alignment:
Q  612 tcggatatgatataatctgacaatatgtttataagtggggacaatattcactttacaagtcggttttgtgaggttgtgtta 692  Q
    |||||||||| || |||||||||| |||||||||||| | |||||  |||| | |||||||| ||||||||||||||||||    
T  38731939 tcggatatgagatgatctgacaatgtgtttataagtgagaacaatcctcacctcacaagtcgattttgtgaggttgtgtta 38731859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 628 - 715
Target Start/End: Original strand, 8098317 - 8098403
Alignment:
Q  628 ctgacaatatgtttataagtggggacaatattcactttacaagtcggttttgtgaggttgtgttaagtccaaccacaatttttaatat 715  Q
    |||||||| ||||||||||||||| ||||  |||| | ||||| |||||||||| |||||||||||| |||||||| |||| ||||||    
T  8098317 ctgacaatttgtttataagtgggg-caatcctcacctcacaagccggttttgtggggttgtgttaagcccaaccacgatttctaatat 8098403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 594 - 705
Target Start/End: Complemental strand, 18333584 - 18333473
Alignment:
Q  594 tgtgttaagagtcacagatcggatatgatataatctgacaatatgtttataagtggggacaatattcactttacaagtcggttttgtgaggttgtgttaa 693  Q
    |||||||||| || || |||||||| || ||  ||||||||| |||||||||||||||  |||  |||| | ||||| |||||||||| ||||||||||     
T  18333584 tgtgttaagaatcccacatcggataggagatggtctgacaatgtgtttataagtgggggtaatcctcacctcacaagccggttttgtggggttgtgttag 18333485  T
Q  694 gtccaaccacaa 705  Q
    | ||||||||||    
T  18333484 gcccaaccacaa 18333473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 594 - 708
Target Start/End: Complemental strand, 41666876 - 41666762
Alignment:
Q  594 tgtgttaagagtcacagatcggatatgatataatctgacaatatgtttataagtggggacaatattcactttacaagtcggttttgtgaggttgtgttaa 693  Q
    ||||||||||||| || |||||| | || ||   |||||||| ||||||||||||||| ||||  |||| | ||||| |||||||||| ||||||||||     
T  41666876 tgtgttaagagtcccacatcggacaggacatggcctgacaatgtgtttataagtgggggcaatcctcacctcacaagccggttttgtggggttgtgttag 41666777  T
Q  694 gtccaaccacaattt 708  Q
    | |||||||| ||||    
T  41666776 gcccaaccacgattt 41666762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 595 - 708
Target Start/End: Original strand, 19705869 - 19705982
Alignment:
Q  595 gtgttaagagtcacagatcggatatgatataatctgacaatatgtttataagtggggacaatattcactttacaagtcggttttgtgaggttgtgttaag 694  Q
    |||||||||||| || ||||| || || |||  |||||||| ||||||||||||||| ||||  |||| ||| ||| ||||||||||  ||||||||| |    
T  19705869 gtgttaagagtcccacatcgggtaggacatagcctgacaatgtgtttataagtgggggcaatcctcaccttataagccggttttgtggagttgtgttagg 19705968  T
Q  695 tccaaccacaattt 708  Q
     |||||||| ||||    
T  19705969 cccaaccacgattt 19705982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 628 - 717
Target Start/End: Complemental strand, 27133078 - 27132989
Alignment:
Q  628 ctgacaatatgtttataagtggggacaatattcactttacaagtcggttttgtgaggttgtgttaagtccaaccacaatttttaatataa 717  Q
    |||||||| |||||||||||| || ||||  |||| | ||||| |||||||||| |||||||||| | |||||||| |||| ||||||||    
T  27133078 ctgacaatttgtttataagtgagggcaatcctcacctcacaagccggttttgtggggttgtgttaggcccaaccacgatttctaatataa 27132989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 628 - 708
Target Start/End: Complemental strand, 41667078 - 41666998
Alignment:
Q  628 ctgacaatatgtttataagtggggacaatattcactttacaagtcggttttgtgaggttgtgttaagtccaaccacaattt 708  Q
    |||||||| ||||||||||||||| ||||  |||| | ||||| |||||||||| |||||||||| | |||||||| ||||    
T  41667078 ctgacaatgtgtttataagtgggggcaatcctcacctcacaagccggttttgtggggttgtgttaggcccaaccacgattt 41666998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 596 - 715
Target Start/End: Complemental strand, 6413773 - 6413655
Alignment:
Q  596 tgttaagagtcacagatcggatatgatataatctgacaatatgtttataagtggggacaatattcactttacaagtcggttttgtgaggttgtgttaagt 695  Q
    ||||||||||| || ||||||||||| || || ||||||| ||||||||||| ||||||||  |||| | | ||| ||||||| || |||||||||||      
T  6413773 tgttaagagtcccacatcggatatgagatgat-tgacaatgtgtttataagtagggacaatcctcacctcataagccggttttttggggttgtgttaaac 6413675  T
Q  696 ccaaccacaatttttaatat 715  Q
    ||||| || |||| ||||||    
T  6413674 ccaacaacgatttctaatat 6413655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 629 - 708
Target Start/End: Original strand, 9368830 - 9368909
Alignment:
Q  629 tgacaatatgtttataagtggggacaatattcactttacaagtcggttttgtgaggttgtgttaagtccaaccacaattt 708  Q
    ||||||| ||||||||||||||| ||||  |||||| ||||| || || |||| |||||||||| | |||||||||||||    
T  9368830 tgacaatgtgtttataagtgggggcaattctcacttcacaagccgattatgtggggttgtgttaggcccaaccacaattt 9368909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 627 - 702
Target Start/End: Original strand, 24528538 - 24528613
Alignment:
Q  627 tctgacaatatgtttataagtggggacaatattcactttacaagtcggttttgtgaggttgtgttaagtccaacca 702  Q
    ||||||||| ||||||||||||||| ||||  |||| | ||||| |||||||||| |||||||||| | |||||||    
T  24528538 tctgacaatgtgtttataagtgggggcaatcctcacctcacaagccggttttgtggggttgtgttaggcccaacca 24528613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 594 - 692
Target Start/End: Complemental strand, 17352553 - 17352456
Alignment:
Q  594 tgtgttaagagtcacagatcggatatgatataatctgacaatatgtttataagtggggacaatattcactttacaagtcggttttgtgaggttgtgtta 692  Q
    ||||||||||||| || |||| ||| || || | |||||||| ||||||||||||||| ||||  |||| | ||||| |||||||||||||||| ||||    
T  17352553 tgtgttaagagtcccacatcg-ataagagatgacctgacaatgtgtttataagtgggggcaatcatcacctcacaagccggttttgtgaggttgcgtta 17352456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 594 - 708
Target Start/End: Complemental strand, 24346620 - 24346506
Alignment:
Q  594 tgtgttaagagtcacagatcggatatgatataatctgacaatatgtttataagtggggacaatattcactttacaagtcggttttgtgaggttgtgttaa 693  Q
    ||||||||||||| || |||||||| || ||   |||||||| |||||||||||||||  |||  |||| | ||||| ||||||| || ||||||||||     
T  24346620 tgtgttaagagtcccacatcggataggacatggcctgacaatgtgtttataagtgggggtaatcctcacctcacaagccggttttatggggttgtgttag 24346521  T
Q  694 gtccaaccacaattt 708  Q
    |  ||||||||||||    
T  24346520 gctcaaccacaattt 24346506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 631 - 693
Target Start/End: Complemental strand, 25258383 - 25258321
Alignment:
Q  631 acaatatgtttataagtggggacaatattcactttacaagtcggttttgtgaggttgtgttaa 693  Q
    ||||||||||||| ||||||| ||||  |||| | |||||||||||||||| |||||||||||    
T  25258383 acaatatgtttatcagtgggggcaatcctcacctcacaagtcggttttgtggggttgtgttaa 25258321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 631 - 693
Target Start/End: Complemental strand, 25322173 - 25322111
Alignment:
Q  631 acaatatgtttataagtggggacaatattcactttacaagtcggttttgtgaggttgtgttaa 693  Q
    ||||||||||||| ||||||| ||||  |||| | |||||||||||||||| |||||||||||    
T  25322173 acaatatgtttatcagtgggggcaatcctcacctcacaagtcggttttgtggggttgtgttaa 25322111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 594 - 708
Target Start/End: Original strand, 15480522 - 15480638
Alignment:
Q  594 tgtgttaagagtcacagatcggatatgatataatctgacaatatgtttataagtgggga--caatattcactttacaagtcggttttgtgaggttgtgtt 691  Q
    ||||||||||||| || ||| ||||||| ||   |||||||  |||||||||||||||   ||||  |||| | ||||| |||||||||| |||||||||    
T  15480522 tgtgttaagagtcccacatcagatatgacatggcctgacaacgtgtttataagtgggggatcaatcctcacctcacaagccggttttgtggggttgtgtt 15480621  T
Q  692 aagtccaaccacaattt 708  Q
    | | |||||||||||||    
T  15480622 aggcccaaccacaattt 15480638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 630 - 702
Target Start/End: Original strand, 7607595 - 7607667
Alignment:
Q  630 gacaatatgtttataagtggggacaatattcactttacaagtcggttttgtgaggttgtgttaagtccaacca 702  Q
    |||||| ||||||||||||| |||||| ||||| | ||||| ||||||||||  ||||||||| | |||||||    
T  7607595 gacaatctgtttataagtggagacaatcttcacctcacaagccggttttgtggagttgtgttaggcccaacca 7607667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 598 - 714
Target Start/End: Original strand, 8287771 - 8287886
Alignment:
Q  598 ttaagagtcacagatcggatatgatataatctgacaatatgtttataagtggggacaatattcactttacaagtcggttttgtgaggttgtgttaagtcc 697  Q
    |||||||||||| ||||| || ||  |  |||| |||| ||||||||||||||| ||||   ||| | ||||| |||||||||| |||||||||| | ||    
T  8287771 ttaagagtcacacatcggctaggagttggtctggcaatttgtttataagtgggg-caatccccacctcacaagccggttttgtggggttgtgttaggccc 8287869  T
Q  698 aaccacaatttttaata 714  Q
    ||||||||||| |||||    
T  8287870 aaccacaatttctaata 8287886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 596 - 708
Target Start/End: Original strand, 9368562 - 9368674
Alignment:
Q  596 tgttaagagtcacagatcggatatgatataatctgacaatatgtttataagtggggacaatattcactttacaagtcggttttgtgaggttgtgttaagt 695  Q
    |||||||||||| | |||||||| || ||    ||||||| ||||||||||||| | ||||  |||| | ||||| |||||||||| |||||||||| |     
T  9368562 tgttaagagtcatacatcggataggagatggcgtgacaatgtgtttataagtggaggcaatcctcacctcacaagccggttttgtggggttgtgttaggc 9368661  T
Q  696 ccaaccacaattt 708  Q
    ||||||| |||||    
T  9368662 ccaaccataattt 9368674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 628 - 712
Target Start/End: Complemental strand, 24270190 - 24270107
Alignment:
Q  628 ctgacaatatgtttataagtggggacaatattcactttacaagtcggttttgtgaggttgtgttaagtccaaccacaatttttaa 712  Q
    |||||||| | |||||||||||||  |||| |||| | ||||| |||||||||| ||||||||| || |||||||| ||||||||    
T  24270190 ctgacaatgtatttataagtgggggtaatactcacctcacaagccggttttgtggggttgtgtt-agaccaaccacgatttttaa 24270107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 596 - 712
Target Start/End: Complemental strand, 24346854 - 24346738
Alignment:
Q  596 tgttaagagtcacagatcggatatgatataatctgacaatatgtttataagtggggacaatattcactttacaagtcggttttgtgaggttgtgttaagt 695  Q
    ||||||||||| || |||| ||| || ||   |||||||| | |||||||||||||  |||| |||| | ||||| |||||||||| ||||||||||       
T  24346854 tgttaagagtcccacatcgaataagacatggcctgacaatgtatttataagtgggggtaatactcacctcacaagccggttttgtggggttgtgttagac 24346755  T
Q  696 ccaaccacaatttttaa 712  Q
    |||||||| ||||||||    
T  24346754 ccaaccacgatttttaa 24346738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 628 - 708
Target Start/End: Original strand, 24531598 - 24531678
Alignment:
Q  628 ctgacaatatgtttataagtggggacaatattcactttacaagtcggttttgtgaggttgtgttaagtccaaccacaattt 708  Q
    |||||||| ||||||||||||||| ||||  |||| | ||||| || ||||||| |||||||||| | |||||||| ||||    
T  24531598 ctgacaatgtgtttataagtgggggcaatcctcacctcacaagccgattttgtggggttgtgttatgcccaaccacgattt 24531678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 628 - 690
Target Start/End: Complemental strand, 2062023 - 2061961
Alignment:
Q  628 ctgacaatatgtttataagtggggacaatattcactttacaagtcggttttgtgaggttgtgt 690  Q
    |||||||| ||||||||||||||| |||| ||||| | ||||| |||| ||||| ||||||||    
T  2062023 ctgacaatgtgtttataagtgggggcaatcttcacctcacaagccggtcttgtgtggttgtgt 2061961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 629 - 699
Target Start/End: Complemental strand, 13700673 - 13700603
Alignment:
Q  629 tgacaatatgtttataagtggggacaatattcactttacaagtcggttttgtgaggttgtgttaagtccaa 699  Q
    ||||||| |||||||||||  |||||||  |||| | | ||| ||||||||||||||||||||| ||||||    
T  13700673 tgacaatgtgtttataagtttggacaattctcacctcaaaagccggttttgtgaggttgtgttatgtccaa 13700603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 594 - 708
Target Start/End: Complemental strand, 24269989 - 24269876
Alignment:
Q  594 tgtgttaagagtcacagatcggatatgatataatctgacaatatgtttataagtggggacaatattcactttacaagtcggttttgtgaggttgtgttaa 693  Q
    ||||||||||||| || |||||||| || ||   |||||||| |||||||||||||||  |||  |||| | ||||| ||||||| || ||||||||||     
T  24269989 tgtgttaagagtcccacatcggataggacatggcctgacaatgtgtttataagtgggg-taatcctcacctcacaagccggttttatggggttgtgttag 24269891  T
Q  694 gtccaaccacaattt 708  Q
    |  ||||||||||||    
T  24269890 gctcaaccacaattt 24269876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 672 - 705
Target Start/End: Complemental strand, 9682357 - 9682324
Alignment:
Q  672 cggttttgtgaggttgtgttaagtccaaccacaa 705  Q
    ||||||||||||||||||||| ||||||||||||    
T  9682357 cggttttgtgaggttgtgttaggtccaaccacaa 9682324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 627 - 708
Target Start/End: Original strand, 15480320 - 15480401
Alignment:
Q  627 tctgacaatatgtttataagtggggacaatattcactttacaagtcggttttgtgaggttgtgttaagtccaaccacaattt 708  Q
    ||||||||| ||||||||||||||| ||||  |||| | |||||  ||||||||| |||| ||||| | |||||||| ||||    
T  15480320 tctgacaatgtgtttataagtgggggcaatcctcacctcacaagctggttttgtggggttctgttaggcccaaccacgattt 15480401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 47; Significance: 2e-17; HSPs: 41)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 594 - 708
Target Start/End: Original strand, 16419467 - 16419581
Alignment:
Q  594 tgtgttaagagtcacagatcggatatgatataatctgacaatatgtttataagtggggacaatattcactttacaagtcggttttgtgaggttgtgttaa 693  Q
    ||||||||||||| || |||||||| || ||  ||||||||| ||||||||||||||| ||||  |||| | ||||| |||||||||| ||||||||||     
T  16419467 tgtgttaagagtcccacatcggataggacatggtctgacaatgtgtttataagtgggggcaatcctcacctcacaagccggttttgtggggttgtgttag 16419566  T
Q  694 gtccaaccacaattt 708  Q
    | |||||||| ||||    
T  16419567 gcccaaccacgattt 16419581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 594 - 715
Target Start/End: Original strand, 2324205 - 2324326
Alignment:
Q  594 tgtgttaagagtcacagatcggatatgatataatctgacaatatgtttataagtggggacaatattcactttacaagtcggttttgtgaggttgtgttaa 693  Q
    ||||||||||||| || ||||| || ||  |  ||||||||| ||||||||||||||| ||||  |||| | ||||| |||||||||| ||||||||||     
T  2324205 tgtgttaagagtcccacatcggttaggagttggtctgacaatttgtttataagtgggggcaatcctcacctcacaagccggttttgtggggttgtgttag 2324304  T
Q  694 gtccaaccacaatttttaatat 715  Q
    | |||||||| |||||||||||    
T  2324305 gcccaaccacgatttttaatat 2324326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 597 - 712
Target Start/End: Complemental strand, 36352275 - 36352160
Alignment:
Q  597 gttaagagtcacagatcggatatgatataatctgacaatatgtttataagtggggacaatattcactttacaagtcggttttgtgaggttgtgttaagtc 696  Q
    ||||||||||  | || |||| ||| ||||||| ||||| ||||||||||||||| ||||  |||| | | ||| |||||||||| |||||||||| ||     
T  36352275 gttaagagtcttacattggatttgagataatctaacaatgtgtttataagtgggggcaatcatcacctcaaaagccggttttgtggggttgtgttaggtt 36352176  T
Q  697 caaccacaatttttaa 712  Q
    ||||||||||||||||    
T  36352175 caaccacaatttttaa 36352160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 628 - 717
Target Start/End: Complemental strand, 19191695 - 19191606
Alignment:
Q  628 ctgacaatatgtttataagtggggacaatattcactttacaagtcggttttgtgaggttgtgttaagtccaaccacaatttttaatataa 717  Q
    |||||| | ||||||||||||||||||||  |||| | ||||| |||||||||| |||||||||| | |||||||| |||| ||||||||    
T  19191695 ctgacagtttgtttataagtggggacaatcctcacctcacaagccggttttgtggggttgtgttaggcccaaccacgatttctaatataa 19191606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 628 - 692
Target Start/End: Original strand, 16533546 - 16533610
Alignment:
Q  628 ctgacaatatgtttataagtggggacaatattcactttacaagtcggttttgtgaggttgtgtta 692  Q
    |||||||| ||||||||||||||| ||||  |||||| ||||| |||||||||||||||||||||    
T  16533546 ctgacaatgtgtttataagtgggggcaatcctcacttcacaagccggttttgtgaggttgtgtta 16533610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 596 - 712
Target Start/End: Original strand, 37840304 - 37840420
Alignment:
Q  596 tgttaagagtcacagatcggatatgatataatctgacaatatgtttataagtggggacaatattcactttacaagtcggttttgtgaggttgtgttaagt 695  Q
    ||||||||||| || || ||||| || || | |||||||| ||||||||||||| | ||||  |||| | ||||| |||||||||| |||||||||  |     
T  37840304 tgttaagagtcccacattggataggagatgacctgacaatgtgtttataagtggaggcaatcatcacctcacaagccggttttgtggggttgtgttgggc 37840403  T
Q  696 ccaaccacaatttttaa 712  Q
    |||||||||||||||||    
T  37840404 ccaaccacaatttttaa 37840420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 594 - 717
Target Start/End: Complemental strand, 17854811 - 17854688
Alignment:
Q  594 tgtgttaagagtcacagatcggatatgatataatctgacaatatgtttataagtggggacaatattcactttacaagtcggttttgtgaggttgtgttaa 693  Q
    ||||||||||||| || ||||| || ||  ||  |||||||| ||||||||||||||| ||||  |||  | |||||||||||||||| | ||||||||     
T  17854811 tgtgttaagagtcccacatcggttaggagttagcctgacaatctgtttataagtgggggcaatcatcatctcacaagtcggttttgtgggattgtgttag 17854712  T
Q  694 gtccaaccacaatttttaatataa 717  Q
    | |||||||| |||| ||||||||    
T  17854711 gcccaaccacgatttctaatataa 17854688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 594 - 708
Target Start/End: Original strand, 2029969 - 2030083
Alignment:
Q  594 tgtgttaagagtcacagatcggatatgatataatctgacaatatgtttataagtggggacaatattcactttacaagtcggttttgtgaggttgtgttaa 693  Q
    ||||||||||||| || |||||| |||| || | |||||||| ||||||||||||| | ||||  |||| | ||||| |||||||||| |||||| |||     
T  2029969 tgtgttaagagtcccacatcggacatgacatgacctgacaatgtgtttataagtggaggcaatcctcacctcacaagccggttttgtggggttgttttag 2030068  T
Q  694 gtccaaccacaattt 708  Q
    | |||||||| ||||    
T  2030069 gcccaaccacgattt 2030083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 594 - 708
Target Start/End: Complemental strand, 5711558 - 5711444
Alignment:
Q  594 tgtgttaagagtcacagatcggatatgatataatctgacaatatgtttataagtggggacaatattcactttacaagtcggttttgtgaggttgtgttaa 693  Q
    ||||||||||||| || |||||| | || ||   |||||||| ||||||||||||||| ||||  |||| | ||||| |||||||||| ||||||||||     
T  5711558 tgtgttaagagtcccacatcggaaaggaaatggcctgacaatgtgtttataagtgggggcaatcctcacctaacaagccggttttgtggggttgtgttag 5711459  T
Q  694 gtccaaccacaattt 708  Q
    | |||||||| ||||    
T  5711458 gcccaaccacgattt 5711444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 594 - 708
Target Start/End: Complemental strand, 5711794 - 5711680
Alignment:
Q  594 tgtgttaagagtcacagatcggatatgatataatctgacaatatgtttataagtggggacaatattcactttacaagtcggttttgtgaggttgtgttaa 693  Q
    ||||||||||||| || |||||| | || ||   |||||||| ||||||||||||||| ||||  |||| ||| ||| |||||||||| ||||||||||     
T  5711794 tgtgttaagagtcccacatcggacaggacatggcctgacaatgtgtttataagtgggggcaatcatcaccttaaaagccggttttgtggggttgtgttag 5711695  T
Q  694 gtccaaccacaattt 708  Q
    | |||||||| ||||    
T  5711694 gcccaaccaccattt 5711680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 594 - 708
Target Start/End: Complemental strand, 25082656 - 25082542
Alignment:
Q  594 tgtgttaagagtcacagatcggatatgatataatctgacaatatgtttataagtggggacaatattcactttacaagtcggttttgtgaggttgtgttaa 693  Q
    ||||||||||||| || ||| |||| || ||  ||||||||| ||||||||||| ||| ||||  |||| | ||||| | |||||||| ||||||||||     
T  25082656 tgtgttaagagtctcatatcagataagagatggtctgacaatgtgtttataagtaggggcaatcatcacctcacaagccagttttgtggggttgtgttag 25082557  T
Q  694 gtccaaccacaattt 708  Q
    |||||||||| ||||    
T  25082556 gtccaaccacgattt 25082542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 628 - 714
Target Start/End: Complemental strand, 36316136 - 36316050
Alignment:
Q  628 ctgacaatatgtttataagtggggacaatattcactttacaagtcggttttgtgaggttgtgttaagtccaaccacaatttttaata 714  Q
    |||||||| ||||||||||||||| ||||  |||| ||||||| | |||||||| |||| ||||| |||||||||| |||| |||||    
T  36316136 ctgacaatttgtttataagtgggggcaatcctcacattacaagccagttttgtggggttatgttaggtccaaccacgatttctaata 36316050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 630 - 715
Target Start/End: Original strand, 5509314 - 5509399
Alignment:
Q  630 gacaatatgtttataagtggggacaatattcactttacaagtcggttttgtgaggttgtgttaagtccaaccacaatttttaatat 715  Q
    |||||| ||||||||||||||| ||||  ||||   ||||| |||||||||| ||| |||||| |||||||||| |||||||||||    
T  5509314 gacaatttgtttataagtgggggcaatcctcaccccacaagccggttttgtggggtagtgttaggtccaaccacgatttttaatat 5509399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 629 - 714
Target Start/End: Complemental strand, 37770027 - 37769942
Alignment:
Q  629 tgacaatatgtttataagtggggacaatattcactttacaagtcggttttgtgaggttgtgttaagtccaaccacaatttttaata 714  Q
    ||||||| ||||||||||||||| |||| ||||| | | ||| |||||||||| ||||||||||   |||||||| ||||||||||    
T  37770027 tgacaatttgtttataagtgggggcaatcttcacctcataagccggttttgtggggttgtgttagacccaaccacgatttttaata 37769942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 596 - 708
Target Start/End: Original strand, 2029736 - 2029848
Alignment:
Q  596 tgttaagagtcacagatcggatatgatataatctgacaatatgtttataagtggggacaatattcactttacaagtcggttttgtgaggttgtgttaagt 695  Q
    ||||||||||| || |||||||| || || | |||||||| ||||||||||||| | ||||  |||| | ||||| |||||||||| |||||| ||| |     
T  2029736 tgttaagagtcccacatcggataggacatgacctgacaatgtgtttataagtggaggcaatcctcacctcacaagccggttttgtggggttgttttaggc 2029835  T
Q  696 ccaaccacaattt 708  Q
    |||||||| ||||    
T  2029836 ccaaccacgattt 2029848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 628 - 708
Target Start/End: Complemental strand, 14466495 - 14466415
Alignment:
Q  628 ctgacaatatgtttataagtggggacaatattcactttacaagtcggttttgtgaggttgtgttaagtccaaccacaattt 708  Q
    |||||||| ||||||||||||||  ||||  |||| ||||||| |||||||||| |||||||||| | |||||||| ||||    
T  14466495 ctgacaatgtgtttataagtgggagcaatcctcaccttacaagccggttttgtggggttgtgttaggcccaaccaccattt 14466415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 628 - 708
Target Start/End: Complemental strand, 27897690 - 27897611
Alignment:
Q  628 ctgacaatatgtttataagtggggacaatattcactttacaagtcggttttgtgaggttgtgttaagtccaaccacaattt 708  Q
    |||||||| ||||||||||||||| ||||  |||| | |||||||||||||||| |||||||||| | |||||||| ||||    
T  27897690 ctgacaatttgtttataagtgggg-caattctcacctcacaagtcggttttgtggggttgtgttaggcccaaccaccattt 27897611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 594 - 702
Target Start/End: Complemental strand, 40149122 - 40149014
Alignment:
Q  594 tgtgttaagagtcacagatcggatatgatataatctgacaatatgtttataagtggggacaatattcactttacaagtcggttttgtgaggttgtgttaa 693  Q
    ||||||||||||| || ||||||||  | || | || ||| | ||||||||||||||||||||  |||| | ||||| || ||||||| ||||||||||     
T  40149122 tgtgttaagagtctcacatcggatagaagatgacctaacagtgtgtttataagtggggacaatcctcacctcacaagccgattttgtggggttgtgttag 40149023  T
Q  694 gtccaacca 702  Q
    |||||||||    
T  40149022 gtccaacca 40149014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 628 - 702
Target Start/End: Complemental strand, 5851767 - 5851692
Alignment:
Q  628 ctgacaatatgtttataagtggggacaatattcactttacaagtcggttttgt-gaggttgtgttaagtccaacca 702  Q
    |||||||| | ||||||||||||||||||  |||| | ||||| ||||||||| |||||||||||| |||||||||    
T  5851767 ctgacaatgtatttataagtggggacaatcctcacctcacaagccggttttgtggaggttgtgttaggtccaacca 5851692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 593 - 712
Target Start/End: Complemental strand, 15124668 - 15124549
Alignment:
Q  593 atgtgttaagagtcacagatcggatatgatataatctgacaatatgtttataagtggggacaatattcactttacaagtcggttttgtgaggttgtgtta 692  Q
    |||||||||||||| || ||||||||  | ||  ||||||||||||||||||||||||| ||||   ||| | | ||| || ||||||| ||||||||||    
T  15124668 atgtgttaagagtcccacatcggatagaacatggtctgacaatatgtttataagtgggggcaatccccacctcataagccgattttgtggggttgtgtta 15124569  T
Q  693 agtccaaccacaatttttaa 712  Q
       |||||||| ||||||||    
T  15124568 gacccaaccacgatttttaa 15124549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 596 - 690
Target Start/End: Complemental strand, 17525455 - 17525361
Alignment:
Q  596 tgttaagagtcacagatcggatatgatataatctgacaatatgtttataagtggggacaatattcactttacaagtcggttttgtgaggttgtgt 690  Q
    ||||||||||| || |||||| |||| ||  ||||||||| ||||||||||||||| ||||  |||| | ||||| |||||||||| | ||||||    
T  17525455 tgttaagagtcccacatcggacatgacatggtctgacaatgtgtttataagtgggggcaatcctcacctcacaagccggttttgtgggattgtgt 17525361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 594 - 692
Target Start/End: Original strand, 24396065 - 24396163
Alignment:
Q  594 tgtgttaagagtcacagatcggatatgatataatctgacaatatgtttataagtggggacaatattcactttacaagtcggttttgtgaggttgtgtta 692  Q
    ||||||||||||| || ||||||||| | ||   |||||||||||||||||||| |||  |||  ||||   |||||||||||||||| ||||||||||    
T  24396065 tgtgttaagagtcccacatcggatataagatggcctgacaatatgtttataagtaggggtaattatcaccccacaagtcggttttgtggggttgtgtta 24396163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 594 - 680
Target Start/End: Complemental strand, 37812387 - 37812301
Alignment:
Q  594 tgtgttaagagtcacagatcggatatgatataatctgacaatatgtttataagtggggacaatattcactttacaagtcggttttgt 680  Q
    ||||||||||||| || |||||||| || ||   |||||||| ||||||||||||||||||||  |||| | |||||||| ||||||    
T  37812387 tgtgttaagagtcccacatcggataggacatggcctgacaatgtgtttataagtggggacaatcctcacctcacaagtcgattttgt 37812301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 594 - 708
Target Start/End: Complemental strand, 40379328 - 40379214
Alignment:
Q  594 tgtgttaagagtcacagatcggatatgatataatctgacaatatgtttataagtggggacaatattcactttacaagtcggttttgtgaggttgtgttaa 693  Q
    ||||||||||||| || |||||||| |  ||   |||||| | ||||||||||||||| ||||  |||| | ||||| |||||||||| ||||||||||     
T  40379328 tgtgttaagagtcccacatcggataggtgatggcctgacagtgtgtttataagtgggggcaatcctcacctcacaagccggttttgtggggttgtgttag 40379229  T
Q  694 gtccaaccacaattt 708  Q
    | |||||||| ||||    
T  40379228 gcccaaccacgattt 40379214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 600 - 717
Target Start/End: Original strand, 14927073 - 14927190
Alignment:
Q  600 aagagtcacagatcggatatgatataatctgacaatatgtttataagtggggacaatattcactttacaagtcggttttgtgaggttgtgttaagtccaa 699  Q
    |||||||||| |||||||| || || | |||||||| ||||||||||||||| ||||  |||| | | ||||| | |||||| |||||||||| |  |||    
T  14927073 aagagtcacacatcggataagagatgacctgacaatgtgtttataagtgggggcaatcctcacctcataagtcagctttgtgtggttgtgttaggctcaa 14927172  T
Q  700 ccacaatttttaatataa 717  Q
    |||| |||| ||| ||||    
T  14927173 ccacgatttctaagataa 14927190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 667 - 708
Target Start/End: Complemental strand, 30701171 - 30701130
Alignment:
Q  667 caagtcggttttgtgaggttgtgttaagtccaaccacaattt 708  Q
    ||||||||||||||| |||||||||||| |||||||||||||    
T  30701171 caagtcggttttgtggggttgtgttaagcccaaccacaattt 30701130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 595 - 680
Target Start/End: Complemental strand, 37812616 - 37812531
Alignment:
Q  595 gtgttaagagtcacagatcggatatgatataatctgacaatatgtttataagtggggacaatattcactttacaagtcggttttgt 680  Q
    |||||||||||| || |||||||| || || | |||||||| ||||||||||||||| ||||  |||| | |||||||| ||||||    
T  37812616 gtgttaagagtcccacatcggataagacatgacctgacaatgtgtttataagtgggggcaatcctcacctcacaagtcgattttgt 37812531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 628 - 692
Target Start/End: Original strand, 2324473 - 2324537
Alignment:
Q  628 ctgacaatatgtttataagtggggacaatattcactttacaagtcggttttgtgaggttgtgtta 692  Q
    |||||||| ||||||||||||||| ||||  |||| | ||||| |||||||||| ||||||||||    
T  2324473 ctgacaatttgtttataagtgggggcaatcctcacctcacaagccggttttgtggggttgtgtta 2324537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 596 - 656
Target Start/End: Original strand, 4662198 - 4662258
Alignment:
Q  596 tgttaagagtcacagatcggatatgatataatctgacaatatgtttataagtggggacaat 656  Q
    ||||||||||| || |||||||| || || | |||||||||||||||||||||||| ||||    
T  4662198 tgttaagagtcccacatcggataggacatgacctgacaatatgtttataagtgggggcaat 4662258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 634 - 690
Target Start/End: Original strand, 5206703 - 5206759
Alignment:
Q  634 atatgtttataagtggggacaatattcactttacaagtcggttttgtgaggttgtgt 690  Q
    |||||||||||||||| |  ||| ||||| ||||||||| |||||||||||||||||    
T  5206703 atatgtttataagtggaggtaatcttcaccttacaagtcagttttgtgaggttgtgt 5206759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 628 - 708
Target Start/End: Original strand, 17719399 - 17719479
Alignment:
Q  628 ctgacaatatgtttataagtggggacaatattcactttacaagtcggttttgtgaggttgtgttaagtccaaccacaattt 708  Q
    |||||||| ||||||||||||||| ||||  |||| | ||||| |||||||||  |||||||||  | |||||||||||||    
T  17719399 ctgacaatgtgtttataagtgggggcaatcctcacctcacaagccggttttgtcgggttgtgttcggcccaaccacaattt 17719479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 628 - 692
Target Start/End: Original strand, 32884106 - 32884170
Alignment:
Q  628 ctgacaatatgtttataagtggggacaatattcactttacaagtcggttttgtgaggttgtgtta 692  Q
    |||||||| ||||||||||||||| ||||  |||| | ||||| |||||||||| ||||||||||    
T  32884106 ctgacaatttgtttataagtgggggcaatcctcacctcacaagccggttttgtggggttgtgtta 32884170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 628 - 708
Target Start/End: Complemental strand, 40379529 - 40379449
Alignment:
Q  628 ctgacaatatgtttataagtggggacaatattcactttacaagtcggttttgtgaggttgtgttaagtccaaccacaattt 708  Q
    |||||| | ||||||||||||||| ||||  |||| | ||||| |||||||||| |||||||||| | |||||||| ||||    
T  40379529 ctgacagtgtgtttataagtgggggcaatcctcacctcacaagccggttttgtggggttgtgttaggcccaaccacgattt 40379449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 596 - 692
Target Start/End: Complemental strand, 42639731 - 42639635
Alignment:
Q  596 tgttaagagtcacagatcggatatgatataatctgacaatatgtttataagtggggacaatattcactttacaagtcggttttgtgaggttgtgtta 692  Q
    ||||||||||| || || | |||||| ||  ||||||||| ||||||||| ||||||||||  |||| | |||||  ||||||||| ||||||||||    
T  42639731 tgttaagagtcccacattgaatatgacatggtctgacaatgtgtttataaatggggacaatcgtcacctcacaagctggttttgtggggttgtgtta 42639635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 637 - 692
Target Start/End: Complemental strand, 15124859 - 15124804
Alignment:
Q  637 tgtttataagtggggacaatattcactttacaagtcggttttgtgaggttgtgtta 692  Q
    |||||||||||| || |||| ||||||| |||| ||||||||||| ||||||||||    
T  15124859 tgtttataagtgagggcaatcttcacttcacaattcggttttgtggggttgtgtta 15124804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 636 - 703
Target Start/End: Original strand, 45295948 - 45296014
Alignment:
Q  636 atgtttataagtggggacaatattcactttacaagtcggttttgtgaggttgtgttaagtccaaccac 703  Q
    |||||||||||||||||||| |||||| | | ||||| ||| |||| |||||||||| ||||||||||    
T  45295948 atgtttataagtggggacaacattcacctcaaaagtcagttatgtg-ggttgtgttaggtccaaccac 45296014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 627 - 708
Target Start/End: Original strand, 21591779 - 21591861
Alignment:
Q  627 tctgacaatatgtttataagt-ggggacaatattcactttacaagtcggttttgtgaggttgtgttaagtccaaccacaattt 708  Q
    ||||||||| ||||||||||| |||| |||| ||||| | | ||||||||||| || |||||||||| | |||||||| ||||    
T  21591779 tctgacaatttgtttataagtggggggcaatcttcacctcataagtcggttttatggggttgtgttaggcccaaccacgattt 21591861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 598 - 715
Target Start/End: Original strand, 5509048 - 5509165
Alignment:
Q  598 ttaagagtcacagatcggatatgatataatctgacaatatgtttataagtggggacaatattcactttacaagtcggttttgtgaggttgtgttaagtcc 697  Q
    |||||||||||| ||||| || ||  |  ||||||||| |||||||||||||||  |||  |||| | |||||  ||||||||| |||||||||| | ||    
T  5509048 ttaagagtcacacatcggttaggagttggtctgacaatttgtttataagtgggggtaatcctcacctcacaagctggttttgtggggttgtgttaggccc 5509147  T
Q  698 aaccacaatttttaatat 715  Q
    |||||  |||| ||||||    
T  5509148 aaccatgatttctaatat 5509165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 590 - 715
Target Start/End: Complemental strand, 17855052 - 17854927
Alignment:
Q  590 ataatgtgttaagagtcacagatcggatatgatataatctgacaatatgtttataagtggggacaatattcactttacaagtcggttttgtgaggttgtg 689  Q
    |||| |||||||||||| || ||||| || ||  | | |||||||| |||||||||||| || ||||  |||| | ||||| |||||||||| |||||||    
T  17855052 ataaagtgttaagagtctcacatcggttaggagttgacctgacaatttgtttataagtgagggcaatcctcacctcacaagccggttttgtggggttgtg 17854953  T
Q  690 ttaagtccaaccacaatttttaatat 715  Q
     ||   |||||||| |||| ||||||    
T  17854952 ctagacccaaccacgatttctaatat 17854927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 631 - 708
Target Start/End: Complemental strand, 28407875 - 28407798
Alignment:
Q  631 acaatatgtttataagtggggacaatattcactttacaagtcggttttgtgaggttgtgttaagtccaaccacaattt 708  Q
    ||||| ||||||||||||||| ||||  |||| | ||||| ||||||||||  ||||||||| | |||||||| ||||    
T  28407875 acaatttgtttataagtgggggcaatcctcacctcacaagccggttttgtggagttgtgttaggcccaaccacgattt 28407798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 596 - 681
Target Start/End: Complemental strand, 40149343 - 40149260
Alignment:
Q  596 tgttaagagtcacagatcggatatgatataatctgacaatatgtttataagtggggacaatattcactttacaagtcggttttgtg 681  Q
    ||||||||||| || ||||||||||| || | || ||||| ||||||||||||||| ||||  |||| | ||||||||||||||||    
T  40149343 tgttaagagtc-cacatcggatatgagatgacctaacaatgtgtttataagtgggg-caattctcacctcacaagtcggttttgtg 40149260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0519 (Bit Score: 45; Significance: 3e-16; HSPs: 2)
Name: scaffold0519
Description:

Target: scaffold0519; HSP #1
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 596 - 708
Target Start/End: Original strand, 1883 - 1995
Alignment:
Q  596 tgttaagagtcacagatcggatatgatataatctgacaatatgtttataagtggggacaatattcactttacaagtcggttttgtgaggttgtgttaagt 695  Q
    ||||||||||| || |||||| | || ||  ||||||||| ||||||||||||||| ||||  |||| ||||||| |||||||||| |||||||||| |     
T  1883 tgttaagagtcccacatcggacaggacatggtctgacaatgtgtttataagtgggggcaatcctcaccttacaagccggttttgtggggttgtgttaggc 1982  T
Q  696 ccaaccacaattt 708  Q
    |||||||| ||||    
T  1983 ccaaccaccattt 1995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0519; HSP #2
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 594 - 708
Target Start/End: Original strand, 2116 - 2230
Alignment:
Q  594 tgtgttaagagtcacagatcggatatgatataatctgacaatatgtttataagtggggacaatattcactttacaagtcggttttgtgaggttgtgttaa 693  Q
    ||||||||||||| || |||||| | || ||   |||||||| ||||||||||||||| ||||  |||| ||||||| |||||||||| ||||||||||     
T  2116 tgtgttaagagtcccacatcggacaggacatggcctgacaatgtgtttataagtgggggcaatcctcaccttacaagccggttttgtggggttgtgttag 2215  T
Q  694 gtccaaccacaattt 708  Q
    | |||||||| ||||    
T  2216 gcccaaccaccattt 2230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 45; Significance: 3e-16; HSPs: 39)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 627 - 715
Target Start/End: Original strand, 3169764 - 3169852
Alignment:
Q  627 tctgacaatatgtttataagtggggacaatattcactttacaagtcggttttgtgaggttgtgttaagtccaaccacaatttttaatat 715  Q
    ||||||||| ||||||||||||||| |||| ||||| | ||||| |||||||||| |||||||||| | |||||||| |||| ||||||    
T  3169764 tctgacaatttgtttataagtgggggcaatcttcacctcacaagccggttttgtggggttgtgttaggcccaaccacgatttctaatat 3169852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 596 - 712
Target Start/End: Original strand, 11924888 - 11925004
Alignment:
Q  596 tgttaagagtcacagatcggatatgatataatctgacaatatgtttataagtggggacaatattcactttacaagtcggttttgtgaggttgtgttaagt 695  Q
    |||||||||| ||| |||||||| |  ||  |||||||||||||||||||||||||  | |  |||| ||||||  ||||||||||||||||||||| |     
T  11924888 tgttaagagttacacatcggataggtgatggtctgacaatatgtttataagtgggggtatttctcaccttacaaaccggttttgtgaggttgtgttaggc 11924987  T
Q  696 ccaaccacaatttttaa 712  Q
    |||||||| ||||||||    
T  11924988 ccaaccacgatttttaa 11925004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 594 - 717
Target Start/End: Complemental strand, 25145604 - 25145481
Alignment:
Q  594 tgtgttaagagtcacagatcggatatgatataatctgacaatatgtttataagtggggacaatattcactttacaagtcggttttgtgaggttgtgttaa 693  Q
    ||||||||||||| || |||||||| |  ||  ||||||||| ||||||| ||||||| ||||  |||| | |||||||||||||||||||||||||||     
T  25145604 tgtgttaagagtctcacatcggataggtgatggtctgacaatgtgtttattagtgggggcaatcctcacctcacaagtcggttttgtgaggttgtgttag 25145505  T
Q  694 gtccaaccacaatttttaatataa 717  Q
      |||||||| |||| ||| ||||    
T  25145504 acccaaccacgatttctaagataa 25145481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 596 - 703
Target Start/End: Complemental strand, 26173573 - 26173466
Alignment:
Q  596 tgttaagagtcacagatcggatatgatataatctgacaatatgtttataagtggggacaatattcactttacaagtcggttttgtgaggttgtgttaagt 695  Q
    ||||||||||| || ||| ||||||| ||  ||||||||| ||||||||||||||| ||||  |||| ||  ||| |||||||||| |||||||||| ||    
T  26173573 tgttaagagtcccacatcagatatgagatggtctgacaatgtgtttataagtgggggcaattctcaccttgtaagccggttttgtggggttgtgttaggt 26173474  T
Q  696 ccaaccac 703  Q
    ||||||||    
T  26173473 ccaaccac 26173466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 594 - 692
Target Start/End: Original strand, 38668325 - 38668423
Alignment:
Q  594 tgtgttaagagtcacagatcggatatgatataatctgacaatatgtttataagtggggacaatattcactttacaagtcggttttgtgaggttgtgtta 692  Q
    ||||||||||||| || ||||||||||  ||  | ||||||| ||||||||||||||| ||||  |||| |||||||||||||||||| | ||||||||    
T  38668325 tgtgttaagagtcccacatcggatatgtgatggtttgacaatgtgtttataagtgggggcaatcatcaccttacaagtcggttttgtgggattgtgtta 38668423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 594 - 692
Target Start/End: Original strand, 38733347 - 38733445
Alignment:
Q  594 tgtgttaagagtcacagatcggatatgatataatctgacaatatgtttataagtggggacaatattcactttacaagtcggttttgtgaggttgtgtta 692  Q
    ||||||||||||| || ||||||||||  ||  |||||||||||||||||||||| || ||||  |||| | | | | |||||||||||||||||||||    
T  38733347 tgtgttaagagtcccacatcggatatgtgatggtctgacaatatgtttataagtgagggcaatcctcacctcataggccggttttgtgaggttgtgtta 38733445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 595 - 708
Target Start/End: Complemental strand, 4098281 - 4098168
Alignment:
Q  595 gtgttaagagtcacagatcggatatgatataatctgacaatatgtttataagtggggacaatattcactttacaagtcggttttgtgaggttgtgttaag 694  Q
    |||||||||||| || |||| |||||| ||  |||||| || ||||||||||||||| ||||  || ||| ||||  |||||||||| | |||||||| |    
T  4098281 gtgttaagagtctcacatcgaatatgagatcgtctgacgatgtgtttataagtgggggcaatcctctcttcacaaaccggttttgtgtgattgtgttagg 4098182  T
Q  695 tccaaccacaattt 708  Q
     |||||||||||||    
T  4098181 cccaaccacaattt 4098168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 611 - 708
Target Start/End: Original strand, 40079134 - 40079231
Alignment:
Q  611 atcggatatgatataatctgacaatatgtttataagtggggacaatattcactttacaagtcggttttgtgaggttgtgttaagtccaaccacaattt 708  Q
    |||||||| || || | |||||||| ||||||||||||||| ||||  |||| | ||||| |||||||||| |||||||||| | |||||||| ||||    
T  40079134 atcggataggagatgacctgacaatgtgtttataagtgggggcaatcctcacctcacaagccggttttgtggggttgtgttaggcccaaccacgattt 40079231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 628 - 708
Target Start/End: Complemental strand, 4113091 - 4113011
Alignment:
Q  628 ctgacaatatgtttataagtggggacaatattcactttacaagtcggttttgtgaggttgtgttaagtccaaccacaattt 708  Q
    |||||||| ||||||||||||||| ||||  |||| | ||||| |||||||||| |||||||||| | |||||||| ||||    
T  4113091 ctgacaatgtgtttataagtgggggcaatcctcacctcacaagccggttttgtggggttgtgttaggcccaaccacgattt 4113011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 596 - 708
Target Start/End: Complemental strand, 15986450 - 15986338
Alignment:
Q  596 tgttaagagtcacagatcggatatgatataatctgacaatatgtttataagtggggacaatattcactttacaagtcggttttgtgaggttgtgttaagt 695  Q
    |||||||||||  | |||||||| || |||  |||||||| ||||||||||||||| ||||  |||| | |||||  ||| ||||| |||||||||| ||    
T  15986450 tgttaagagtcctacatcggataggagatagcctgacaatgtgtttataagtgggggcaatcctcacctcacaagctggtattgtggggttgtgttaggt 15986351  T
Q  696 ccaaccacaattt 708  Q
    |||||||| ||||    
T  15986350 ccaaccaccattt 15986338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 596 - 692
Target Start/End: Complemental strand, 17452945 - 17452849
Alignment:
Q  596 tgttaagagtcacagatcggatatgatataatctgacaatatgtttataagtggggacaatattcactttacaagtcggttttgtgaggttgtgtta 692  Q
    ||||||||||| || |||||||| || ||   |||||||| | ||||||||||||| |||| ||||| | ||||| |||||||||| ||||||||||    
T  17452945 tgttaagagtcccacatcggataagacatggcctgacaatgtatttataagtgggggcaatcttcacctcacaagccggttttgtggggttgtgtta 17452849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 627 - 715
Target Start/End: Original strand, 51588990 - 51589078
Alignment:
Q  627 tctgacaatatgtttataagtggggacaatattcactttacaagtcggttttgtgaggttgtgttaagtccaaccacaatttttaatat 715  Q
    ||||||||| |||||||||||| || ||||  |||| | ||||| |||||||||| |||||||||| | |||||||| |||| ||||||    
T  51588990 tctgacaatttgtttataagtgagggcaatcctcacctcacaagccggttttgtggggttgtgttaggcccaaccaccatttctaatat 51589078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 627 - 714
Target Start/End: Complemental strand, 12245048 - 12244962
Alignment:
Q  627 tctgacaatatgtttataagtggggacaatattcactttacaagtcggttttgtgaggttgtgttaagtccaaccacaatttttaata 714  Q
    |||| |||| ||||||||||||||| ||||  |||| | ||||| |||||||||| |||||||||| |||||| ||| ||||||||||    
T  12245048 tctggcaatttgtttataagtgggggcaatcctcacctcacaagccggttttgtggggttgtgttaggtccaa-cacgatttttaata 12244962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 594 - 708
Target Start/End: Original strand, 35772229 - 35772343
Alignment:
Q  594 tgtgttaagagtcacagatcggatatgatataatctgacaatatgtttataagtggggacaatattcactttacaagtcggttttgtgaggttgtgttaa 693  Q
    ||||||||||||| || |||||||| || ||   |||||||| ||||||||||||||| ||||  | || | | ||| |||||||||| ||||||||||     
T  35772229 tgtgttaagagtcccacatcggataggagatggcctgacaatgtgtttataagtgggggcaatccttacctcagaagccggttttgtggggttgtgttag 35772328  T
Q  694 gtccaaccacaattt 708  Q
    | |||||||| ||||    
T  35772329 gcccaaccacgattt 35772343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 595 - 708
Target Start/End: Complemental strand, 4098520 - 4098408
Alignment:
Q  595 gtgttaagagtcacagatcggatatgatataatctgacaatatgtttataagtggggacaatattcactttacaagtcggttttgtgaggttgtgttaag 694  Q
    |||||||||||| || ||||||||  | ||  | ||| ||| ||||||||||||||| ||||  |||| |||||||| ||||||||| |||||||||| |    
T  4098520 gtgttaagagtcgcacatcggataatagatggtttgataatgtgtttataagtgggggcaatcctcaccttacaagttggttttgtg-ggttgtgttagg 4098422  T
Q  695 tccaaccacaattt 708  Q
     |||||||| ||||    
T  4098421 cccaaccacgattt 4098408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 594 - 712
Target Start/End: Original strand, 16163132 - 16163252
Alignment:
Q  594 tgtgttaagagtcacagatcggatatgatataatctgacaatatgtttataagtggggacaatattcactttacaagtcggttttgtgaggt--tgtgtt 691  Q
    ||||||||||||| || |||||||| |  || |  ||||||| ||||||||||||||| |||| ||||| | ||||  |||||||||| |||  | ||||    
T  16163132 tgtgttaagagtcccacatcggataggtgatgacttgacaatgtgtttataagtgggggcaatcttcacctcacaatccggttttgtggggttatatgtt 16163231  T
Q  692 aagtccaaccacaatttttaa 712  Q
    | | |||||||||||||||||    
T  16163232 aggcccaaccacaatttttaa 16163252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 627 - 708
Target Start/End: Original strand, 38733150 - 38733230
Alignment:
Q  627 tctgacaatatgtttataagtggggacaatattcactttacaagtcggttttgtgaggttgtgttaagtccaaccacaattt 708  Q
    ||||||||| |||||||||||||| |||||  |||  | |||||||||||||||||| |||||||| || ||||||| ||||    
T  38733150 tctgacaatgtgtttataagtggg-acaattctcatctcacaagtcggttttgtgagattgtgttaggttcaaccacgattt 38733230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 594 - 715
Target Start/End: Original strand, 51589191 - 51589312
Alignment:
Q  594 tgtgttaagagtcacagatcggatatgatataatctgacaatatgtttataagtggggacaatattcactttacaagtcggttttgtgaggttgtgttaa 693  Q
    ||||||||||||| || ||||| || ||  |  ||||||||| |||||||||||| || ||||  |||| | ||||| |||||||||| ||||||||||     
T  51589191 tgtgttaagagtcccacatcggttaggagttggtctgacaatttgtttataagtgagggcaatcctcacctcacaagccggttttgtggggttgtgttag 51589290  T
Q  694 gtccaaccacaatttttaatat 715  Q
    | | |||||| |||| ||||||    
T  51589291 gcctaaccacgatttctaatat 51589312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 628 - 708
Target Start/End: Complemental strand, 2859477 - 2859397
Alignment:
Q  628 ctgacaatatgtttataagtggggacaatattcactttacaagtcggttttgtgaggttgtgttaagtccaaccacaattt 708  Q
    |||||||| ||||||||||||||| ||||  | || | ||||| ||||| ||||||||||||||| | |||||||| ||||    
T  2859477 ctgacaatgtgtttataagtgggggcaatccttacctcacaagccggttctgtgaggttgtgttaggcccaaccaccattt 2859397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 596 - 692
Target Start/End: Complemental strand, 2859744 - 2859648
Alignment:
Q  596 tgttaagagtcacagatcggatatgatataatctgacaatatgtttataagtggggacaatattcactttacaagtcggttttgtgaggttgtgtta 692  Q
    ||||||||||| || |||||||| |  ||  ||||||||| ||||||| |||||||  |||  |||| | ||||| |||||||||||||||||||||    
T  2859744 tgttaagagtctcacatcggataggtgatggtctgacaatgtgtttattagtgggggtaatcctcacctcacaagccggttttgtgaggttgtgtta 2859648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 628 - 708
Target Start/End: Complemental strand, 17452764 - 17452684
Alignment:
Q  628 ctgacaatatgtttataagtggggacaatattcactttacaagtcggttttgtgaggttgtgttaagtccaaccacaattt 708  Q
    |||||||| | ||||||||||||| ||||  |||| | ||||| |||||||||| |||||||||| | |||||||| ||||    
T  17452764 ctgacaatgtatttataagtgggggcaatcctcacctcacaagccggttttgtggggttgtgttaggcccaaccacgattt 17452684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 628 - 692
Target Start/End: Original strand, 27413581 - 27413645
Alignment:
Q  628 ctgacaatatgtttataagtggggacaatattcactttacaagtcggttttgtgaggttgtgtta 692  Q
    |||||||||||||||||||||| | ||||  |||| | |||| |||||||| |||||||||||||    
T  27413581 ctgacaatatgtttataagtggaggcaatcctcacctcacaaatcggttttatgaggttgtgtta 27413645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 596 - 708
Target Start/End: Original strand, 30369802 - 30369914
Alignment:
Q  596 tgttaagagtcacagatcggatatgatataatctgacaatatgtttataagtggggacaatattcactttacaagtcggttttgtgaggttgtgttaagt 695  Q
    ||||||||||  || ||||||||||| ||  || |||||||||||||||||| ||| ||||  |||| | |||||   |||||||| |||||||||| |     
T  30369802 tgttaagagttccacatcggatatgagatggtccgacaatatgtttataagtaggggcaatcctcacctcacaagatagttttgtggggttgtgttaggc 30369901  T
Q  696 ccaaccacaattt 708  Q
    |||||||| ||||    
T  30369902 ccaaccacgattt 30369914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 596 - 700
Target Start/End: Complemental strand, 41035944 - 41035840
Alignment:
Q  596 tgttaagagtcacagatcggatatgatataatctgacaatatgtttataagtggggacaatattcactttacaagtcggttttgtgaggttgtgttaagt 695  Q
    ||||||||||| ||  ||||||| || ||   ||| |||||||||||||||||||| ||||  |||| | ||||| |||||||||| | |||||||| ||    
T  41035944 tgttaagagtctcacgtcggataggacatggcctgccaatatgtttataagtgggggcaatcctcacctcacaagccggttttgtgggattgtgttaggt 41035845  T
Q  696 ccaac 700  Q
    |||||    
T  41035844 ccaac 41035840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 596 - 708
Target Start/End: Original strand, 43409774 - 43409885
Alignment:
Q  596 tgttaagagtcacagatcggatatgatataatctgacaatatgtttataagtggggacaatattcactttacaagtcggttttgtgaggttgtgttaagt 695  Q
    ||||||||||| || ||||||||  | ||  ||||||||| | ||||||||||||| ||||  |||| | ||||| |||||||| | |||||||||| ||    
T  43409774 tgttaagagtctcacatcggatagaacatggtctgacaatgtatttataagtgggg-caattctcacctcacaagccggttttggggggttgtgttatgt 43409872  T
Q  696 ccaaccacaattt 708  Q
    |||||||| ||||    
T  43409873 ccaaccacgattt 43409885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 627 - 715
Target Start/End: Original strand, 51589804 - 51589892
Alignment:
Q  627 tctgacaatatgtttataagtggggacaatattcactttacaagtcggttttgtgaggttgtgttaagtccaaccacaatttttaatat 715  Q
    ||||||||| |||||||||||| || ||||  |||| | ||||| || ||||||| |||||||||| | |||||||| |||| ||||||    
T  51589804 tctgacaatttgtttataagtgagggcaatcctcacctcacaagccgattttgtggggttgtgttaggcccaaccacgatttctaatat 51589892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 594 - 702
Target Start/End: Original strand, 52961547 - 52961655
Alignment:
Q  594 tgtgttaagagtcacagatcggatatgatataatctgacaatatgtttataagtggggacaatattcactttacaagtcggttttgtgaggttgtgttaa 693  Q
    ||||||||| ||| || |||||||| || ||  ||||||||| |||||||||||| || ||||  |||| | | ||| ||||||| || ||||||||||     
T  52961547 tgtgttaagtgtcccacatcggataggagatggtctgacaatgtgtttataagtgagggcaatcctcacctcaaaagccggttttatggggttgtgttag 52961646  T
Q  694 gtccaacca 702  Q
    |||||||||    
T  52961647 gtccaacca 52961655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 612 - 691
Target Start/End: Original strand, 9499229 - 9499307
Alignment:
Q  612 tcggatatgatataatctgacaatatgtttataagtggggacaatattcactttacaagtcggttttgtgaggttgtgtt 691  Q
    ||||||| || ||| ||||||||||||||||||||| ||| |||| ||||| | ||||  |||||||||| |||||||||    
T  9499229 tcggataggagatagtctgacaatatgtttataagtaggggcaatcttcacctcacaa-ccggttttgtggggttgtgtt 9499307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 637 - 680
Target Start/End: Complemental strand, 12376513 - 12376470
Alignment:
Q  637 tgtttataagtggggacaatattcactttacaagtcggttttgt 680  Q
    ||||||||||||||| |||| ||||||| |||||||||||||||    
T  12376513 tgtttataagtgggggcaatcttcacttcacaagtcggttttgt 12376470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 639 - 690
Target Start/End: Original strand, 39544406 - 39544457
Alignment:
Q  639 tttataagtggggacaatattcactttacaagtcggttttgtgaggttgtgt 690  Q
    ||||||| ||||||||||  ||||||||||||| ||||||||| ||||||||    
T  39544406 tttataaatggggacaatcctcactttacaagttggttttgtggggttgtgt 39544457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 637 - 708
Target Start/End: Complemental strand, 40316126 - 40316055
Alignment:
Q  637 tgtttataagtggggacaatattcactttacaagtcggttttgtgaggttgtgttaagtccaaccacaattt 708  Q
    ||||||||||||||| ||||  |||| | | ||| |||||||||||||||||||||  ||||||||| ||||    
T  40316126 tgtttataagtggggtcaatcctcacctcataagccggttttgtgaggttgtgttagatccaaccacgattt 40316055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 637 - 708
Target Start/End: Complemental strand, 51460518 - 51460447
Alignment:
Q  637 tgtttataagtggggacaatattcactttacaagtcggttttgtgaggttgtgttaagtccaaccacaattt 708  Q
    ||||||||||||| |  ||| ||||||||||||| | |||||||| |||||||||| | ||||||| |||||    
T  51460518 tgtttataagtggtggtaatcttcactttacaagccagttttgtggggttgtgttaggcccaaccataattt 51460447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 626 - 708
Target Start/End: Complemental strand, 8870997 - 8870915
Alignment:
Q  626 atctgacaatatgtttataagtggggacaatattcactttacaagtcggttttgtgaggttgtgttaagtccaaccacaattt 708  Q
    |||||||||| ||||||||||| ||| ||||  |||| | | ||| || ||||||| |||||||||| |||||||||| ||||    
T  8870997 atctgacaatgtgtttataagttggggcaattctcacctcataagccgtttttgtggggttgtgttaggtccaaccaccattt 8870915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 628 - 714
Target Start/End: Complemental strand, 25137388 - 25137302
Alignment:
Q  628 ctgacaatatgtttataagtggggacaatattcactttacaagtcggttttgtgaggttgtgttaagtccaaccacaatttttaata 714  Q
    |||||||| |||||||||||  || ||||  |||| | | ||| |||||||||| |||||||||| | ||||||||||||| |||||    
T  25137388 ctgacaatttgtttataagtatgggcaatcctcacctcataagccggttttgtggggttgtgttaggcccaaccacaatttctaata 25137302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 594 - 692
Target Start/End: Original strand, 35892256 - 35892354
Alignment:
Q  594 tgtgttaagagtcacagatcggatatgatataatctgacaatatgtttataagtggggacaatattcactttacaagtcggttttgtgaggttgtgtta 692  Q
    ||||||||||||| || ||| ||||| | ||  ||||||||| | ||||||||||||| ||||| |||| | ||||  |||||||||| |||| |||||    
T  35892256 tgtgttaagagtcccacatcagatataagatggtctgacaatgtatttataagtgggggcaatactcacctcacaacccggttttgtggggttctgtta 35892354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 630 - 708
Target Start/End: Complemental strand, 52650854 - 52650776
Alignment:
Q  630 gacaatatgtttataagtggggacaatattcactttacaagtcggttttgtgaggttgtgttaagtccaaccacaattt 708  Q
    |||||| ||||||||||||||| ||||  |||| | |||||  ||||||||| |||||||||| | ||||||| |||||    
T  52650854 gacaatgtgtttataagtgggggcaatcctcacctcacaagctggttttgtggggttgtgttaggcccaaccataattt 52650776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 637 - 678
Target Start/End: Complemental strand, 12325372 - 12325331
Alignment:
Q  637 tgtttataagtggggacaatattcactttacaagtcggtttt 678  Q
    ||||||||||||||| |||| ||||||| |||||||||||||    
T  12325372 tgtttataagtgggggcaatcttcacttcacaagtcggtttt 12325331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 595 - 692
Target Start/End: Original strand, 25713359 - 25713456
Alignment:
Q  595 gtgttaagagtcacagatcggatatgatataatctgacaatatgtttataagtggggacaatattcactttacaagtcggttttgtgaggttgtgtta 692  Q
    |||||||||||| || |||||||| |  ||  ||||||||| ||||||||||||||| ||||  |||| | ||||| | ||||||||  |||||||||    
T  25713359 gtgttaagagtcccacatcggataggtgatggtctgacaatgtgtttataagtgggggcaatcgtcacctcacaagccagttttgtggagttgtgtta 25713456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 627 - 688
Target Start/End: Complemental strand, 28408128 - 28408067
Alignment:
Q  627 tctgacaatatgtttataagtggggacaatattcactttacaagtcggttttgtgaggttgt 688  Q
    ||||||||| ||||||||||||||||||||  | || | ||||| |||||||||| ||||||    
T  28408128 tctgacaatttgtttataagtggggacaatccttacctcacaagccggttttgtggggttgt 28408067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0766 (Bit Score: 43; Significance: 0.000000000000004; HSPs: 1)
Name: scaffold0766
Description:

Target: scaffold0766; HSP #1
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 594 - 708
Target Start/End: Original strand, 6239 - 6353
Alignment:
Q  594 tgtgttaagagtcacagatcggatatgatataatctgacaatatgtttataagtggggacaatattcactttacaagtcggttttgtgaggttgtgttaa 693  Q
    ||||||||||||| || ||| |||| || ||| ||||||||| ||||||||||||||| ||||  |||| | ||||| || ||||||| ||||||||||     
T  6239 tgtgttaagagtcccacatcagataagagatagtctgacaatgtgtttataagtgggggcaatcctcacctcacaagccgattttgtggggttgtgttag 6338  T
Q  694 gtccaaccacaattt 708  Q
    | |||||||| ||||    
T  6339 gcccaaccacgattt 6353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0129 (Bit Score: 41; Significance: 0.00000000000007; HSPs: 1)
Name: scaffold0129
Description:

Target: scaffold0129; HSP #1
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 627 - 703
Target Start/End: Original strand, 14301 - 14377
Alignment:
Q  627 tctgacaatatgtttataagtggggacaatattcactttacaagtcggttttgtgaggttgtgttaagtccaaccac 703  Q
    ||||||||| ||||||||||||||||||||  |||| | ||||| |||||||||| |||||||||| | ||||||||    
T  14301 tctgacaatgtgtttataagtggggacaatcatcacctcacaagccggttttgtggggttgtgttaggcccaaccac 14377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0692 (Bit Score: 40; Significance: 0.0000000000003; HSPs: 2)
Name: scaffold0692
Description:

Target: scaffold0692; HSP #1
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 597 - 708
Target Start/End: Complemental strand, 5870 - 5759
Alignment:
Q  597 gttaagagtcacagatcggatatgatataatctgacaatatgtttataagtggggacaatattcactttacaagtcggttttgtgaggttgtgttaagtc 696  Q
    |||||||||| || |||||||| || ||| ||||||||| ||||||||||||||| ||||  |||  | ||||| |||||||| | |||||||||| | |    
T  5870 gttaagagtcccacatcggataagacatagtctgacaatgtgtttataagtgggggcaatcctcatctcacaagccggttttgcggggttgtgttaggcc 5771  T
Q  697 caaccacaattt 708  Q
    ||||||| ||||    
T  5770 caaccacgattt 5759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0692; HSP #2
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 629 - 708
Target Start/End: Complemental strand, 5628 - 5549
Alignment:
Q  629 tgacaatatgtttataagtggggacaatattcactttacaagtcggttttgtgaggttgtgttaagtccaaccacaattt 708  Q
    ||||||| ||||||||||||||| ||||  |||||| ||||| |||||||| | |||||||||| | ||||||| |||||    
T  5628 tgacaatgtgtttataagtgggggcaatcctcacttcacaagccggttttgcggggttgtgttaggcccaaccataattt 5549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0481 (Bit Score: 40; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0481
Description:

Target: scaffold0481; HSP #1
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 629 - 692
Target Start/End: Complemental strand, 3555 - 3492
Alignment:
Q  629 tgacaatatgtttataagtggggacaatattcactttacaagtcggttttgtgaggttgtgtta 692  Q
    ||||||| |||||||||||||||||||| ||||| | ||||| |||||||||| ||||||||||    
T  3555 tgacaatttgtttataagtggggacaatcttcacctcacaagccggttttgtggggttgtgtta 3492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0092 (Bit Score: 36; Significance: 0.00000000007; HSPs: 1)
Name: scaffold0092
Description:

Target: scaffold0092; HSP #1
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 629 - 700
Target Start/End: Original strand, 5890 - 5961
Alignment:
Q  629 tgacaatatgtttataagtggggacaatattcactttacaagtcggttttgtgaggttgtgttaagtccaac 700  Q
    |||||||||||||||||||| |||||||  |||| || |||| || |||||| ||||||||||| |||||||    
T  5890 tgacaatatgtttataagtgaggacaatcctcacctttcaagccgattttgttaggttgtgttaggtccaac 5961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047 (Bit Score: 36; Significance: 0.00000000007; HSPs: 1)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 629 - 712
Target Start/End: Original strand, 12647 - 12730
Alignment:
Q  629 tgacaatatgtttataagtggggacaatattcactttacaagtcggttttgtgaggttgtgttaagtccaaccacaatttttaa 712  Q
    ||||||| | |||||| |||||| ||||  |||| | |||||||| ||||||| |||||||||| | |||||||||||||||||    
T  12647 tgacaatgtatttatatgtgggggcaatcctcacctcacaagtcgattttgtgtggttgtgttaggcccaaccacaatttttaa 12730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 36; Significance: 0.00000000007; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 596 - 715
Target Start/End: Original strand, 56426 - 56545
Alignment:
Q  596 tgttaagagtcacagatcggatatgatataatctgacaatatgtttataagtggggacaatattcactttacaagtcggttttgtgaggttgtgttaagt 695  Q
    ||||||||||| || ||||| || ||  | |||||||||| ||||||||| || || ||||  |||| | ||||| |||||||||| |||||||||| |     
T  56426 tgttaagagtcccacatcggttaggagttgatctgacaatttgtttataactgtgggcaatcatcacctcacaagccggttttgtggggttgtgttaggc 56525  T
Q  696 ccaaccacaatttttaatat 715  Q
    |||||||| |||| ||||||    
T  56526 ccaaccacgatttctaatat 56545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0334 (Bit Score: 33; Significance: 0.000000004; HSPs: 1)
Name: scaffold0334
Description:

Target: scaffold0334; HSP #1
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 628 - 692
Target Start/End: Complemental strand, 4514 - 4450
Alignment:
Q  628 ctgacaatatgtttataagtggggacaatattcactttacaagtcggttttgtgaggttgtgtta 692  Q
    |||||||| ||||||||||||||| ||||  |||| | ||||| |||||||||| ||||||||||    
T  4514 ctgacaatttgtttataagtgggggcaatcctcacctcacaagccggttttgtggggttgtgtta 4450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0083 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold0083
Description:

Target: scaffold0083; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 629 - 692
Target Start/End: Original strand, 51236 - 51299
Alignment:
Q  629 tgacaatatgtttataagtggggacaatattcactttacaagtcggttttgtgaggttgtgtta 692  Q
    ||||||| ||||||||||||||| ||||  |||| | ||||||| |||||||| ||||||||||    
T  51236 tgacaatgtgtttataagtgggggcaatcctcacctcacaagtcagttttgtggggttgtgtta 51299  T

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Target: scaffold0041 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 637 - 712
Target Start/End: Original strand, 67493 - 67568
Alignment:
Q  637 tgtttataagtggggacaatattcactttacaagtcggttttgtgaggttgtgttaagtccaaccacaatttttaa 712  Q
    ||||||||||||||| ||||  |||| ||||||  || |||||||  ||||||||  |||||||||||||||||||    
T  67493 tgtttataagtgggggcaatcctcaccttacaaaccgattttgtggagttgtgtttggtccaaccacaatttttaa 67568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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