View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5908_low_4 (Length: 380)
Name: NF5908_low_4
Description: NF5908
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5908_low_4 |
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Alignment Details
Target: chr8 (Bit Score: 235; Significance: 1e-130; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 235; E-Value: 1e-130
Query Start/End: Original strand, 26 - 379
Target Start/End: Complemental strand, 26733431 - 26733077
Alignment:
| Q |
26 |
gtcgacagtaaaaggaaaccatataaaagaaattaaataatcaaatcaaatagtaaaactaacatcataagccatgaaagttaggttcatttggaaagaa |
125 |
Q |
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| T |
26733431 |
gtcgacagtaaatggaaaccatatagaagaaattaaataatcaaatcaaatagtaaaactaacatcataagccatgaaagttaggttcatttggaaagaa |
26733332 |
T |
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| Q |
126 |
tggaattggttgatggtgaattcaagtcacttaaacttttacataacacactaacataaataaaaataaaatcatgtaaatatattttagtcattggtca |
225 |
Q |
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| T |
26733331 |
aggaattggttgatggtgaattcaactcacttaaacttttacataacacactaacatcaatataaaaaaaagtctgtaaatatattttagtcattagtca |
26733232 |
T |
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| Q |
226 |
aaagaataatggtatattgacgtcggagttcaaacctcaaacttcttacttttgtacatttaaaattaatgatctaatcactagactatttgatcagaaa |
325 |
Q |
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|||||| ||||||| |||||||||| ||||||||||| ||||| ||| ||| |||||||||||| ||||||||||| |||| ||||||||| || ||| |
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| T |
26733231 |
aaagaacaatggtacgttgacgtcggggttcaaacctcgaactttttatctttttacatttaaaatcaatgatctaattactatactatttgaccaaaaa |
26733132 |
T |
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| Q |
326 |
tgataaactcacttgtgatgacgtgatggtg-ttgatatatattcttggacatcc |
379 |
Q |
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||||||||||| ||||||||||||||||||| |||||||||| ||||||| |||| |
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| T |
26733131 |
tgataaactcatttgtgatgacgtgatggtgtttgatatatagtcttggagatcc |
26733077 |
T |
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