View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF5910_low_18 (Length: 225)

Name: NF5910_low_18
Description: NF5910
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF5910_low_18
NF5910_low_18
[»] chr3 (61 HSPs)
chr3 (1-155)||(22915816-22915970)
chr3 (158-225)||(21969263-21969330)
chr3 (158-225)||(21991699-21991766)
chr3 (158-225)||(39850451-39850518)
chr3 (159-225)||(10441364-10441430)
chr3 (159-225)||(45487798-45487864)
chr3 (158-225)||(25488447-25488514)
chr3 (158-225)||(25561009-25561076)
chr3 (158-225)||(32237500-32237567)
chr3 (162-225)||(43639188-43639251)
chr3 (159-225)||(4072380-4072446)
chr3 (159-225)||(12789605-12789671)
chr3 (159-225)||(36657539-36657605)
chr3 (160-225)||(13078269-13078334)
chr3 (160-225)||(43150480-43150545)
chr3 (161-225)||(5529892-5529956)
chr3 (161-225)||(10017115-10017179)
chr3 (161-225)||(10254569-10254633)
chr3 (158-225)||(26906452-26906519)
chr3 (158-225)||(45713009-45713076)
chr3 (159-225)||(3970597-3970663)
chr3 (159-225)||(38125285-38125351)
chr3 (164-225)||(8831744-8831805)
chr3 (160-225)||(36278862-36278927)
chr3 (160-225)||(36822866-36822931)
chr3 (161-225)||(10117516-10117580)
chr3 (158-218)||(36822758-36822818)
chr3 (158-225)||(404042-404109)
chr3 (162-225)||(12838079-12838142)
chr3 (158-225)||(25446249-25446314)
chr3 (159-218)||(35368548-35368607)
chr3 (158-225)||(36329286-36329353)
chr3 (158-217)||(36657431-36657490)
chr3 (158-213)||(45487917-45487972)
chr3 (159-217)||(10441257-10441315)
chr3 (159-213)||(21969156-21969210)
chr3 (159-213)||(21991592-21991646)
chr3 (159-209)||(43639080-43639130)
chr3 (159-213)||(50099552-50099606)
chr3 (160-225)||(55340400-55340465)
chr3 (159-219)||(1476663-1476723)
chr3 (158-213)||(3970489-3970544)
chr3 (158-213)||(4072271-4072326)
chr3 (159-218)||(39850343-39850402)
chr3 (159-213)||(10117629-10117683)
chr3 (159-225)||(13724094-13724160)
chr3 (159-213)||(25446368-25446421)
chr3 (160-222)||(32362861-32362923)
chr3 (160-213)||(13078163-13078216)
chr3 (161-213)||(10254687-10254739)
chr3 (158-213)||(26906572-26906627)
chr3 (162-213)||(32237396-32237447)
chr3 (158-213)||(36278754-36278809)
chr3 (159-225)||(157075-157141)
chr3 (159-225)||(46664175-46664241)
chr3 (160-213)||(22101283-22101336)
chr3 (160-213)||(22176227-22176280)
chr3 (82-123)||(31105438-31105479)
chr3 (161-213)||(8831859-8831911)
chr3 (189-225)||(22101193-22101229)
chr3 (189-225)||(22176137-22176173)
[»] chr7 (33 HSPs)
chr7 (158-225)||(10936576-10936643)
chr7 (159-225)||(20184345-20184411)
chr7 (159-225)||(31231722-31231788)
chr7 (159-225)||(38528518-38528584)
chr7 (158-225)||(38883219-38883286)
chr7 (159-225)||(48103367-48103433)
chr7 (160-225)||(34052279-34052344)
chr7 (161-225)||(35665722-35665786)
chr7 (159-225)||(24836019-24836085)
chr7 (159-225)||(30259172-30259238)
chr7 (159-225)||(30594692-30594758)
chr7 (159-225)||(47237534-47237600)
chr7 (160-213)||(20184238-20184291)
chr7 (158-218)||(35665631-35665691)
chr7 (159-213)||(35339277-35339331)
chr7 (160-225)||(3953148-3953213)
chr7 (160-213)||(10936470-10936523)
chr7 (160-213)||(24836138-24836191)
chr7 (159-212)||(33721826-33721879)
chr7 (160-217)||(38883335-38883392)
chr7 (162-225)||(35339384-35339447)
chr7 (159-225)||(9285820-9285886)
chr7 (159-225)||(9289887-9289953)
chr7 (159-213)||(34052397-34052451)
chr7 (160-213)||(31231614-31231667)
chr7 (160-225)||(39617948-39618012)
chr7 (158-225)||(25742537-25742604)
chr7 (160-219)||(29277838-29277897)
chr7 (158-213)||(30259064-30259119)
chr7 (159-213)||(40358233-40358290)
chr7 (160-222)||(12142192-12142254)
chr7 (159-225)||(45997614-45997680)
chr7 (164-225)||(38528394-38528455)
[»] chr1 (51 HSPs)
chr1 (158-225)||(19797087-19797154)
chr1 (159-225)||(5189468-5189534)
chr1 (161-225)||(9978158-9978222)
chr1 (158-225)||(4299501-4299568)
chr1 (159-222)||(49285084-49285147)
chr1 (158-225)||(50627129-50627196)
chr1 (159-225)||(3607835-3607901)
chr1 (159-225)||(15324625-15324691)
chr1 (159-225)||(42561401-42561467)
chr1 (159-225)||(47940677-47940743)
chr1 (160-225)||(27926358-27926423)
chr1 (160-225)||(40647116-40647181)
chr1 (161-225)||(14387121-14387185)
chr1 (158-225)||(2854638-2854705)
chr1 (158-225)||(48954320-48954387)
chr1 (159-225)||(19955017-19955083)
chr1 (160-225)||(23698608-23698673)
chr1 (160-225)||(27928404-27928469)
chr1 (158-218)||(36880624-36880684)
chr1 (158-213)||(27240922-27240977)
chr1 (158-213)||(40647236-40647291)
chr1 (162-225)||(50162645-50162708)
chr1 (159-225)||(2125176-2125242)
chr1 (159-225)||(27241030-27241096)
chr1 (160-225)||(6079384-6079449)
chr1 (160-225)||(21930380-21930445)
chr1 (161-225)||(51276801-51276865)
chr1 (159-213)||(362475-362529)
chr1 (159-225)||(1387779-1387843)
chr1 (159-213)||(47940569-47940623)
chr1 (159-217)||(50627245-50627303)
chr1 (159-225)||(51789701-51789767)
chr1 (161-218)||(1387891-1387948)
chr1 (160-213)||(9978051-9978104)
chr1 (161-218)||(19796982-19797039)
chr1 (160-212)||(25297966-25298018)
chr1 (158-225)||(9895251-9895318)
chr1 (160-207)||(25297922-25297968)
chr1 (158-213)||(42561293-42561348)
chr1 (159-213)||(957707-957761)
chr1 (159-213)||(2854531-2854585)
chr1 (159-213)||(19954910-19954964)
chr1 (159-213)||(23698501-23698555)
chr1 (159-225)||(36880288-36880354)
chr1 (159-213)||(48954213-48954267)
chr1 (159-213)||(51789596-51789650)
chr1 (160-213)||(2125070-2125123)
chr1 (160-213)||(27926251-27926304)
chr1 (189-225)||(957617-957653)
chr1 (185-225)||(26208449-26208489)
chr1 (185-225)||(48645120-48645159)
[»] chr6 (26 HSPs)
chr6 (159-225)||(21380047-21380113)
chr6 (160-225)||(20501706-20501771)
chr6 (158-225)||(885383-885450)
chr6 (160-225)||(11687249-11687314)
chr6 (161-225)||(8091063-8091127)
chr6 (174-224)||(14393575-14393625)
chr6 (160-225)||(3368985-3369050)
chr6 (161-218)||(7808722-7808779)
chr6 (158-213)||(885503-885558)
chr6 (158-217)||(11687141-11687200)
chr6 (162-225)||(18998223-18998286)
chr6 (158-213)||(21379939-21379994)
chr6 (159-225)||(4890587-4890653)
chr6 (159-225)||(13439694-13439760)
chr6 (159-225)||(15546631-15546697)
chr6 (161-225)||(7808610-7808674)
chr6 (159-213)||(8091180-8091234)
chr6 (159-213)||(15546750-15546804)
chr6 (160-213)||(18998117-18998169)
chr6 (158-213)||(4890478-4890533)
chr6 (158-213)||(13439814-13439869)
chr6 (158-213)||(14393682-14393737)
chr6 (160-211)||(17367064-17367115)
chr6 (158-225)||(29608999-29609066)
chr6 (159-213)||(6433689-6433743)
chr6 (164-218)||(20501819-20501872)
[»] chr4 (36 HSPs)
chr4 (159-225)||(52824238-52824304)
chr4 (160-225)||(530775-530840)
chr4 (159-225)||(1298911-1298977)
chr4 (159-225)||(20435246-20435312)
chr4 (161-225)||(18417658-18417722)
chr4 (160-225)||(24969650-24969715)
chr4 (161-225)||(42274599-42274663)
chr4 (158-225)||(13204375-13204442)
chr4 (160-223)||(55107524-55107587)
chr4 (159-213)||(24915793-24915847)
chr4 (160-217)||(23928681-23928738)
chr4 (161-225)||(4688354-4688418)
chr4 (158-213)||(1299030-1299085)
chr4 (158-225)||(28809953-28810020)
chr4 (159-213)||(530668-530722)
chr4 (159-225)||(4552784-4552850)
chr4 (159-213)||(42274491-42274545)
chr4 (160-213)||(27434728-27434781)
chr4 (161-213)||(4688248-4688300)
chr4 (161-213)||(32318721-32318773)
chr4 (159-218)||(11330105-11330164)
chr4 (158-213)||(18417775-18417830)
chr4 (186-225)||(24294493-24294532)
chr4 (162-213)||(24969543-24969594)
chr4 (158-225)||(27434608-27434675)
chr4 (159-213)||(21048704-21048758)
chr4 (159-213)||(23928567-23928620)
chr4 (159-225)||(32318826-32318892)
chr4 (159-225)||(35360676-35360741)
chr4 (159-213)||(43486199-43486253)
chr4 (159-217)||(47465098-47465156)
chr4 (159-213)||(55107642-55107696)
chr4 (160-213)||(20435140-20435193)
chr4 (162-215)||(37525059-37525112)
chr4 (160-213)||(55049400-55049453)
chr4 (158-198)||(3422427-3422467)
[»] chr2 (35 HSPs)
chr2 (159-225)||(16705732-16705798)
chr2 (165-225)||(2818671-2818731)
chr2 (158-225)||(1924087-1924154)
chr2 (158-225)||(23835874-23835941)
chr2 (159-225)||(20892883-20892949)
chr2 (160-225)||(12850648-12850713)
chr2 (160-225)||(22269722-22269787)
chr2 (160-225)||(24101938-24102003)
chr2 (160-225)||(34455885-34455950)
chr2 (161-225)||(7737065-7737129)
chr2 (158-218)||(34490569-34490629)
chr2 (158-225)||(3116874-3116941)
chr2 (158-225)||(9281453-9281520)
chr2 (158-225)||(34490454-34490521)
chr2 (159-213)||(7737183-7737237)
chr2 (159-225)||(9933675-9933741)
chr2 (159-225)||(42713884-42713950)
chr2 (159-225)||(45408624-45408690)
chr2 (159-219)||(20892997-20893056)
chr2 (158-223)||(6605736-6605798)
chr2 (159-218)||(24101831-24101890)
chr2 (161-213)||(10552999-10553051)
chr2 (159-213)||(1923979-1924033)
chr2 (159-225)||(27920572-27920637)
chr2 (158-215)||(22269838-22269895)
chr2 (160-225)||(29229470-29229534)
chr2 (160-225)||(29342770-29342834)
chr2 (160-213)||(45408743-45408796)
chr2 (161-225)||(9850863-9850923)
chr2 (162-225)||(43475946-43476009)
chr2 (159-213)||(3116994-3117048)
chr2 (159-213)||(43858552-43858606)
chr2 (160-213)||(2818784-2818837)
chr2 (160-213)||(16705851-16705904)
chr2 (160-212)||(8111692-8111744)
[»] chr8 (24 HSPs)
chr8 (160-225)||(23940911-23940976)
chr8 (158-225)||(8210321-8210388)
chr8 (159-225)||(15882199-15882265)
chr8 (161-225)||(37114239-37114303)
chr8 (158-225)||(4035739-4035806)
chr8 (159-225)||(29781065-29781131)
chr8 (160-225)||(24211384-24211449)
chr8 (161-225)||(33100751-33100815)
chr8 (159-225)||(12234465-12234531)
chr8 (159-213)||(15882319-15882373)
chr8 (160-218)||(33100645-33100703)
chr8 (161-225)||(5356230-5356294)
chr8 (158-225)||(11828709-11828776)
chr8 (158-225)||(17426736-17426803)
chr8 (158-213)||(38629592-38629647)
chr8 (162-213)||(40891131-40891182)
chr8 (159-213)||(17426627-17426681)
chr8 (159-213)||(24741822-24741876)
chr8 (159-225)||(38520017-38520083)
chr8 (185-225)||(40891038-40891078)
chr8 (158-225)||(38629472-38629539)
chr8 (159-213)||(23940803-23940857)
chr8 (159-213)||(24211277-24211331)
chr8 (159-213)||(38520136-38520190)
[»] chr5 (25 HSPs)
chr5 (162-225)||(24397352-24397415)
chr5 (159-225)||(15855842-15855908)
chr5 (159-225)||(35420718-35420784)
chr5 (158-225)||(1138557-1138624)
chr5 (158-225)||(16472953-16473020)
chr5 (159-225)||(4265981-4266047)
chr5 (158-225)||(21259836-21259903)
chr5 (159-225)||(20476430-20476496)
chr5 (159-213)||(20476549-20476603)
chr5 (159-217)||(35420611-35420669)
chr5 (160-217)||(15855957-15856014)
chr5 (160-217)||(16473069-16473126)
chr5 (159-222)||(33629456-33629519)
chr5 (159-213)||(13754290-13754344)
chr5 (160-225)||(1164902-1164967)
chr5 (164-217)||(8364744-8364797)
chr5 (160-225)||(13754397-13754462)
chr5 (158-225)||(12807910-12807976)
chr5 (159-213)||(1138677-1138731)
chr5 (159-213)||(4266100-4266154)
chr5 (187-225)||(21261970-21262008)
chr5 (159-213)||(33629344-33629398)
chr5 (162-215)||(2255578-2255631)
chr5 (164-213)||(32623219-32623268)
chr5 (159-219)||(18236465-18236525)
[»] scaffold0122 (2 HSPs)
scaffold0122 (159-225)||(45833-45899)
scaffold0122 (160-213)||(45952-46005)
[»] scaffold0595 (2 HSPs)
scaffold0595 (158-225)||(5699-5766)
scaffold0595 (159-213)||(5823-5879)
[»] scaffold0107 (2 HSPs)
scaffold0107 (159-225)||(51062-51128)
scaffold0107 (159-213)||(51181-51235)
[»] scaffold0188 (2 HSPs)
scaffold0188 (158-222)||(7084-7148)
scaffold0188 (158-213)||(7204-7259)
[»] scaffold0069 (1 HSPs)
scaffold0069 (159-219)||(26404-26464)
[»] scaffold0163 (1 HSPs)
scaffold0163 (160-225)||(2046-2111)
[»] scaffold0653 (1 HSPs)
scaffold0653 (159-225)||(3499-3565)
[»] scaffold0006 (1 HSPs)
scaffold0006 (159-225)||(72377-72442)
[»] scaffold0118 (2 HSPs)
scaffold0118 (159-223)||(14441-14505)
scaffold0118 (161-213)||(14560-14612)
[»] scaffold0137 (1 HSPs)
scaffold0137 (162-225)||(10118-10181)
[»] scaffold0086 (1 HSPs)
scaffold0086 (161-213)||(48244-48296)


Alignment Details
Target: chr3 (Bit Score: 92; Significance: 8e-45; HSPs: 61)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 1 - 155
Target Start/End: Original strand, 22915816 - 22915970
Alignment:
Q  1 tcagaagtgagagtgggtttgcgataatgatagattggggcattgtgtttttagagagattgtatatannnnnnnnnnnnnaatttcattgaaatggttg 100  Q
    ||||||||||||||||| |||||||||||||||| ||||||||||||||||| |||||||||||||||             ||||||| |||||||||||    
T  22915816 tcagaagtgagagtgggattgcgataatgatagactggggcattgtgttttttgagagattgtatatatttttttgttcttaatttcaatgaaatggttg 22915915  T
Q  101 ctaattgttttgatatttactactgttacattttgtagcaaatattggattttct 155  Q
    ||||||||||||||||||| ||| |||||||||||||||||||||||||||||||    
T  22915916 ctaattgttttgatatttaataccgttacattttgtagcaaatattggattttct 22915970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 158 - 225
Target Start/End: Complemental strand, 21969330 - 21969263
Alignment:
Q  158 taggagaaaacttagttacaattcctcaggtgcttttcgtacgattcttaactaaaaatacatatttt 225  Q
    ||||||||||||||| |||||||||| |||||||||||||| | ||||||||||||||||||||||||    
T  21969330 taggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaaaatacatatttt 21969263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 158 - 225
Target Start/End: Complemental strand, 21991766 - 21991699
Alignment:
Q  158 taggagaaaacttagttacaattcctcaggtgcttttcgtacgattcttaactaaaaatacatatttt 225  Q
    ||||||||||||||| |||||||||| |||||||||||||| | ||||||||||||||||||||||||    
T  21991766 taggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaaaatacatatttt 21991699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 158 - 225
Target Start/End: Complemental strand, 39850518 - 39850451
Alignment:
Q  158 taggagaaaacttagttacaattcctcaggtgcttttcgtacgattcttaactaaaaatacatatttt 225  Q
    ||||||||||||||| |||||||||| |||||||||||||| |||||||||||||||||| |||||||    
T  39850518 taggagaaaacttaggtacaattccttaggtgcttttcgtatgattcttaactaaaaatatatatttt 39850451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 159 - 225
Target Start/End: Complemental strand, 10441430 - 10441364
Alignment:
Q  159 aggagaaaacttagttacaattcctcaggtgcttttcgtacgattcttaactaaaaatacatatttt 225  Q
    |||||||||||||| |||||||||| |||||||||| ||||| ||||||||||||||||||||||||    
T  10441430 aggagaaaacttaggtacaattccttaggtgcttttggtacggttcttaactaaaaatacatatttt 10441364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 159 - 225
Target Start/End: Original strand, 45487798 - 45487864
Alignment:
Q  159 aggagaaaacttagttacaattcctcaggtgcttttcgtacgattcttaactaaaaatacatatttt 225  Q
    |||||||||||||| |||||||||| |||||||||||||| | ||||||||||||||||||||||||    
T  45487798 aggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaaaatacatatttt 45487864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 158 - 225
Target Start/End: Complemental strand, 25488514 - 25488447
Alignment:
Q  158 taggagaaaacttagttacaattcctcaggtgcttttcgtacgattcttaactaaaaatacatatttt 225  Q
    ||||||||||||||| |||||||||| |||||||||| ||| | ||||||||||||||||||||||||    
T  25488514 taggagaaaacttaggtacaattccttaggtgctttttgtatggttcttaactaaaaatacatatttt 25488447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 158 - 225
Target Start/End: Original strand, 25561009 - 25561076
Alignment:
Q  158 taggagaaaacttagttacaattcctcaggtgcttttcgtacgattcttaactaaaaatacatatttt 225  Q
    ||||||||||||||| |||||||||| |||||||||| ||| | ||||||||||||||||||||||||    
T  25561009 taggagaaaacttaggtacaattccttaggtgctttttgtatggttcttaactaaaaatacatatttt 25561076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 158 - 225
Target Start/End: Complemental strand, 32237567 - 32237500
Alignment:
Q  158 taggagaaaacttagttacaattcctcaggtgcttttcgtacgattcttaactaaaaatacatatttt 225  Q
    ||||||||||||||| |||||||||| |||||||||||||| | ||||||| ||||||||||||||||    
T  32237567 taggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaattaaaaatacatatttt 32237500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 162 - 225
Target Start/End: Complemental strand, 43639251 - 43639188
Alignment:
Q  162 agaaaacttagttacaattcctcaggtgcttttcgtacgattcttaactaaaaatacatatttt 225  Q
    ||||||||||| |||||||||| |||||||||||||| |||||||||||||||||| |||||||    
T  43639251 agaaaacttaggtacaattccttaggtgcttttcgtatgattcttaactaaaaatatatatttt 43639188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 159 - 225
Target Start/End: Complemental strand, 4072446 - 4072380
Alignment:
Q  159 aggagaaaacttagttacaattcctcaggtgcttttcgtacgattcttaactaaaaatacatatttt 225  Q
    |||||||||||||| |||||||||| ||||| |||||||| | ||||||||||||||||||||||||    
T  4072446 aggagaaaacttaggtacaattccttaggtgtttttcgtatggttcttaactaaaaatacatatttt 4072380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 159 - 225
Target Start/End: Original strand, 12789605 - 12789671
Alignment:
Q  159 aggagaaaacttagttacaattcctcaggtgcttttcgtacgattcttaactaaaaatacatatttt 225  Q
    |||||||||||||| |||||||||| ||||| |||||||| | ||||||||||||||||||||||||    
T  12789605 aggagaaaacttaggtacaattccttaggtgtttttcgtatggttcttaactaaaaatacatatttt 12789671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 159 - 225
Target Start/End: Complemental strand, 36657605 - 36657539
Alignment:
Q  159 aggagaaaacttagttacaattcctcaggtgcttttcgtacgattcttaactaaaaatacatatttt 225  Q
    |||||||||||||| |||||||||| || ||||||||||| | ||||||||||||||||||||||||    
T  36657605 aggagaaaacttaggtacaattccttagatgcttttcgtatggttcttaactaaaaatacatatttt 36657539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 160 - 225
Target Start/End: Complemental strand, 13078334 - 13078269
Alignment:
Q  160 ggagaaaacttagttacaattcctcaggtgcttttcgtacgattcttaactaaaaatacatatttt 225  Q
    ||||||||||||| ||||||| || |||| ||||||||| ||||||||||||||||||||||||||    
T  13078334 ggagaaaacttaggtacaatttcttaggtacttttcgtatgattcttaactaaaaatacatatttt 13078269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 160 - 225
Target Start/End: Original strand, 43150480 - 43150545
Alignment:
Q  160 ggagaaaacttagttacaattcctcaggtgcttttcgtacgattcttaactaaaaatacatatttt 225  Q
    ||||||||||||| | ||||||||||||||||||||||| | || |||||||||||||||||||||    
T  43150480 ggagaaaacttaggtgcaattcctcaggtgcttttcgtatggtttttaactaaaaatacatatttt 43150545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 161 - 225
Target Start/End: Original strand, 5529892 - 5529956
Alignment:
Q  161 gagaaaacttagttacaattcctcaggtgcttttcgtacgattcttaactaaaaatacatatttt 225  Q
    |||||||||||| ||||||| || |||||||||||||| | ||||||||||||||||||||||||    
T  5529892 gagaaaacttaggtacaatttcttaggtgcttttcgtatggttcttaactaaaaatacatatttt 5529956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 161 - 225
Target Start/End: Original strand, 10017115 - 10017179
Alignment:
Q  161 gagaaaacttagttacaattcctcaggtgcttttcgtacgattcttaactaaaaatacatatttt 225  Q
    |||||||||||| |||||||||| ||||||||||| || | ||||||||||||||||||||||||    
T  10017115 gagaaaacttaggtacaattccttaggtgcttttcatatggttcttaactaaaaatacatatttt 10017179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 161 - 225
Target Start/End: Original strand, 10254569 - 10254633
Alignment:
Q  161 gagaaaacttagttacaattcctcaggtgcttttcgtacgattcttaactaaaaatacatatttt 225  Q
    |||||||||||| |||||||||| ||||||||||| || | ||||||||||||||||||||||||    
T  10254569 gagaaaacttaggtacaattccttaggtgcttttcatatggttcttaactaaaaatacatatttt 10254633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 158 - 225
Target Start/End: Original strand, 26906452 - 26906519
Alignment:
Q  158 taggagaaaacttagttacaattcctcaggtgcttttcgtacgattcttaactaaaaatacatatttt 225  Q
    ||||||||||||||| |||||||||| |||| ||||||||| | |||||||||||||||| |||||||    
T  26906452 taggagaaaacttaggtacaattccttaggtccttttcgtatggttcttaactaaaaatatatatttt 26906519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 158 - 225
Target Start/End: Complemental strand, 45713076 - 45713009
Alignment:
Q  158 taggagaaaacttagttacaattcctcaggtgcttttcgtacgattcttaactaaaaatacatatttt 225  Q
    |||| |||||||||| |||||||||| |||||||||||||| | |||| |||||||||||||||||||    
T  45713076 taggtgaaaacttaggtacaattccttaggtgcttttcgtatggttctaaactaaaaatacatatttt 45713009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 159 - 225
Target Start/End: Complemental strand, 3970663 - 3970597
Alignment:
Q  159 aggagaaaacttagttacaattcctcaggtgcttttcgtacgattcttaactaaaaatacatatttt 225  Q
    |||||||||||||| ||||||| || |||| ||||||||| | ||||||||||||||||||||||||    
T  3970663 aggagaaaacttaggtacaatttcttaggtacttttcgtatggttcttaactaaaaatacatatttt 3970597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 159 - 225
Target Start/End: Complemental strand, 38125351 - 38125285
Alignment:
Q  159 aggagaaaacttagttacaattcctcaggtgcttttcgtacgattcttaactaaaaatacatatttt 225  Q
    |||||||||||||| |||||||| | ||||| |||||||| | ||||||||||||||||||||||||    
T  38125351 aggagaaaacttaggtacaattcattaggtgtttttcgtatggttcttaactaaaaatacatatttt 38125285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 164 - 225
Target Start/End: Original strand, 8831744 - 8831805
Alignment:
Q  164 aaaacttagttacaattcctcaggtgcttttcgtacgattcttaactaaaaatacatatttt 225  Q
    ||||||||| |||||||||| |||||||||||||| | |||| |||||||||||||||||||    
T  8831744 aaaacttaggtacaattccttaggtgcttttcgtatggttctaaactaaaaatacatatttt 8831805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 160 - 225
Target Start/End: Complemental strand, 36278927 - 36278862
Alignment:
Q  160 ggagaaaacttagttacaattcctcaggtgcttttcgtacgattcttaactaaaaatacatatttt 225  Q
    ||||||||||||| |||||||||| |||| ||||||||| | |||||||||||||||| |||||||    
T  36278927 ggagaaaacttaggtacaattccttaggtccttttcgtatggttcttaactaaaaatatatatttt 36278862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 160 - 225
Target Start/End: Complemental strand, 36822931 - 36822866
Alignment:
Q  160 ggagaaaacttagttacaattcctcaggtgcttttcgtacgattcttaactaaaaatacatatttt 225  Q
    ||||||||||||| |||||||  | |||||||||||||| | ||||||||||||||||||||||||    
T  36822931 ggagaaaacttaggtacaattttttaggtgcttttcgtatggttcttaactaaaaatacatatttt 36822866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 161 - 225
Target Start/End: Original strand, 10117516 - 10117580
Alignment:
Q  161 gagaaaacttagttacaattcctcaggtgcttttcgtacgattcttaactaaaaatacatatttt 225  Q
    |||||||||||| |||| ||||| ||||||||||| || | ||||||||||||||||||||||||    
T  10117516 gagaaaacttaggtacagttccttaggtgcttttcatatggttcttaactaaaaatacatatttt 10117580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 158 - 218
Target Start/End: Original strand, 36822758 - 36822818
Alignment:
Q  158 taggagaaaacttagttacaattcctcaggtgcttttcgtacgattcttaactaaaaatac 218  Q
    ||||||||||||||| |||||||||| || ||||||||||| | |||||||||||||||||    
T  36822758 taggagaaaacttaggtacaattccttagctgcttttcgtatggttcttaactaaaaatac 36822818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 158 - 225
Target Start/End: Original strand, 404042 - 404109
Alignment:
Q  158 taggagaaaacttagttacaattcctcaggtgcttttcgtacgattcttaactaaaaatacatatttt 225  Q
    ||||||||||||||  ||||||| || |||||||||||||| |||| ||||||||||||| |||||||    
T  404042 taggagaaaacttacgtacaatttcttaggtgcttttcgtatgatttttaactaaaaataaatatttt 404109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 162 - 225
Target Start/End: Original strand, 12838079 - 12838142
Alignment:
Q  162 agaaaacttagttacaattcctcaggtgcttttcgtacgattcttaactaaaaatacatatttt 225  Q
    ||||||||||  |||||||||| |||||||||| ||| | ||||||||||||||||||||||||    
T  12838079 agaaaacttatgtacaattccttaggtgctttttgtatggttcttaactaaaaatacatatttt 12838142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 158 - 225
Target Start/End: Original strand, 25446249 - 25446314
Alignment:
Q  158 taggagaaaacttagttacaattcctcaggtgcttttcgtacgattcttaactaaaaatacatatttt 225  Q
    |||||||||||||||| ||||||||| || ||||||||||| | ||||||||||||||||||||||||    
T  25446249 taggagaaaacttagt-acaattccttag-tgcttttcgtatggttcttaactaaaaatacatatttt 25446314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 159 - 218
Target Start/End: Original strand, 35368548 - 35368607
Alignment:
Q  159 aggagaaaacttagttacaattcctcaggtgcttttcgtacgattcttaactaaaaatac 218  Q
    |||||||||||||| |||||||||| | |||||||||||| | |||||||||||||||||    
T  35368548 aggagaaaacttaggtacaattccttatgtgcttttcgtatggttcttaactaaaaatac 35368607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 158 - 225
Target Start/End: Complemental strand, 36329353 - 36329286
Alignment:
Q  158 taggagaaaacttagttacaattcctcaggtgcttttcgtacgattcttaactaaaaatacatatttt 225  Q
    ||||||||||  ||| |||||||| | |||||||||||||| | ||||||||||||||||||||||||    
T  36329353 taggagaaaaggtagctacaattctttaggtgcttttcgtatggttcttaactaaaaatacatatttt 36329286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 158 - 217
Target Start/End: Original strand, 36657431 - 36657490
Alignment:
Q  158 taggagaaaacttagttacaattcctcaggtgcttttcgtacgattcttaactaaaaata 217  Q
    ||||||||||||||| |||||||||| || ||||||||||| | ||||||||||||||||    
T  36657431 taggagaaaacttaggtacaattccttagatgcttttcgtatggttcttaactaaaaata 36657490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 158 - 213
Target Start/End: Complemental strand, 45487972 - 45487917
Alignment:
Q  158 taggagaaaacttagttacaattcctcaggtgcttttcgtacgattcttaactaaa 213  Q
    ||||||||||||||| |||||||||| |||||||||||||| | ||||||||||||    
T  45487972 taggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaa 45487917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 159 - 217
Target Start/End: Original strand, 10441257 - 10441315
Alignment:
Q  159 aggagaaaacttagttacaattcctcaggtgcttttcgtacgattcttaactaaaaata 217  Q
    |||||||||||||  |||||||||| |||||||||| ||| ||||||||||||||||||    
T  10441257 aggagaaaacttaagtacaattccttaggtgcttttggtatgattcttaactaaaaata 10441315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 159 - 213
Target Start/End: Original strand, 21969156 - 21969210
Alignment:
Q  159 aggagaaaacttagttacaattcctcaggtgcttttcgtacgattcttaactaaa 213  Q
    |||||||||||||| |||||||||| |||||||||||||| | ||||||||||||    
T  21969156 aggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaa 21969210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 159 - 213
Target Start/End: Original strand, 21991592 - 21991646
Alignment:
Q  159 aggagaaaacttagttacaattcctcaggtgcttttcgtacgattcttaactaaa 213  Q
    |||||||||||||| |||||||||| |||||||||||||| | ||||||||||||    
T  21991592 aggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaa 21991646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 159 - 209
Target Start/End: Original strand, 43639080 - 43639130
Alignment:
Q  159 aggagaaaacttagttacaattcctcaggtgcttttcgtacgattcttaac 209  Q
    ||||||||||||||||| ||||||| |||||||||||||| ||||||||||    
T  43639080 aggagaaaacttagttataattccttaggtgcttttcgtatgattcttaac 43639130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 159 - 213
Target Start/End: Complemental strand, 50099606 - 50099552
Alignment:
Q  159 aggagaaaacttagttacaattcctcaggtgcttttcgtacgattcttaactaaa 213  Q
    |||||||||||||| |||||||||| |||||||||||||| | ||||||||||||    
T  50099606 aggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaa 50099552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 160 - 225
Target Start/End: Complemental strand, 55340465 - 55340400
Alignment:
Q  160 ggagaaaacttagttacaattcctcaggtgcttttcgtacgattcttaactaaaaatacatatttt 225  Q
    ||||||||||||| |||||||||| ||||  ||||| || | ||||||||||||||||||||||||    
T  55340465 ggagaaaacttagatacaattccttaggtatttttcatatggttcttaactaaaaatacatatttt 55340400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 159 - 219
Target Start/End: Complemental strand, 1476723 - 1476663
Alignment:
Q  159 aggagaaaacttagttacaattcctcaggtgcttttcgtacgattcttaactaaaaataca 219  Q
    |||| ||||||||| |||||||||| ||||||||||| || | ||||||||||||||||||    
T  1476723 aggataaaacttaggtacaattccttaggtgcttttcatatggttcttaactaaaaataca 1476663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 158 - 213
Target Start/End: Original strand, 3970489 - 3970544
Alignment:
Q  158 taggagaaaacttagttacaattcctcaggtgcttttcgtacgattcttaactaaa 213  Q
    ||||||||||||||| | |||||||| |||||||||||||| | ||||||||||||    
T  3970489 taggagaaaacttaggtgcaattccttaggtgcttttcgtatggttcttaactaaa 3970544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 158 - 213
Target Start/End: Original strand, 4072271 - 4072326
Alignment:
Q  158 taggagaaaacttagttacaattcctcaggtgcttttcgtacgattcttaactaaa 213  Q
    ||||||||||||||| ||||||| || |||||||||||||| | ||||||||||||    
T  4072271 taggagaaaacttaggtacaatttcttaggtgcttttcgtatggttcttaactaaa 4072326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 159 - 218
Target Start/End: Original strand, 39850343 - 39850402
Alignment:
Q  159 aggagaaaacttagttacaattcctcaggtgcttttcgtacgattcttaactaaaaatac 218  Q
    |||||||||||||| ||| |||||| ||||| |||||||| | |||||||||||||||||    
T  39850343 aggagaaaacttaggtactattccttaggtgtttttcgtatggttcttaactaaaaatac 39850402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 159 - 213
Target Start/End: Complemental strand, 10117683 - 10117629
Alignment:
Q  159 aggagaaaacttagttacaattcctcaggtgcttttcgtacgattcttaactaaa 213  Q
    ||||||||| |||| |||||||||| |||||||||||||| | ||||||||||||    
T  10117683 aggagaaaatttaggtacaattccttaggtgcttttcgtatggttcttaactaaa 10117629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 159 - 225
Target Start/End: Complemental strand, 13724160 - 13724094
Alignment:
Q  159 aggagaaaacttagttacaattcctcaggtgcttttcgtacgattcttaactaaaaatacatatttt 225  Q
    |||||||| ||||| |||||||||| || || ||||||||  ||| |||||||||||||||||||||    
T  13724160 aggagaaatcttaggtacaattccttagatgtttttcgtataatttttaactaaaaatacatatttt 13724094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 159 - 213
Target Start/End: Complemental strand, 25446421 - 25446368
Alignment:
Q  159 aggagaaaacttagttacaattcctcaggtgcttttcgtacgattcttaactaaa 213  Q
    ||||||||||||||| ||||||||| |||||||||||||| | ||||||||||||    
T  25446421 aggagaaaacttagt-acaattccttaggtgcttttcgtatggttcttaactaaa 25446368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 160 - 222
Target Start/End: Original strand, 32362861 - 32362923
Alignment:
Q  160 ggagaaaacttagttacaattcctcaggtgcttttcgtacgattcttaactaaaaatacatat 222  Q
    ||||||||||||  |||||||| | ||||| |||||||| | |||||||||||||||||||||    
T  32362861 ggagaaaacttaactacaattctttaggtgtttttcgtatggttcttaactaaaaatacatat 32362923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 160 - 213
Target Start/End: Original strand, 13078163 - 13078216
Alignment:
Q  160 ggagaaaacttagttacaattcctcaggtgcttttcgtacgattcttaactaaa 213  Q
    ||||||||||||| | |||||||| |||||||||||||| | ||||||||||||    
T  13078163 ggagaaaacttaggtgcaattccttaggtgcttttcgtatggttcttaactaaa 13078216  T

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Target: chr3; HSP #50
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 161 - 213
Target Start/End: Complemental strand, 10254739 - 10254687
Alignment:
Q  161 gagaaaacttagttacaattcctcaggtgcttttcgtacgattcttaactaaa 213  Q
    ||||||| |||| |||||||||| |||||||||||||| | ||||||||||||    
T  10254739 gagaaaatttaggtacaattccttaggtgcttttcgtatggttcttaactaaa 10254687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 158 - 213
Target Start/End: Complemental strand, 26906627 - 26906572
Alignment:
Q  158 taggagaaaacttagttacaattcctcaggtgcttttcgtacgattcttaactaaa 213  Q
    ||||||||||||||| |||||||||| || | ||||||||| | ||||||||||||    
T  26906627 taggagaaaacttaggtacaattccttagatacttttcgtatggttcttaactaaa 26906572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 162 - 213
Target Start/End: Original strand, 32237396 - 32237447
Alignment:
Q  162 agaaaacttagttacaattcctcaggtgcttttcgtacgattcttaactaaa 213  Q
    ||||||||||| |||||||||| ||||| |||||||| | ||||||||||||    
T  32237396 agaaaacttaggtacaattccttaggtgtttttcgtatggttcttaactaaa 32237447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 158 - 213
Target Start/End: Original strand, 36278754 - 36278809
Alignment:
Q  158 taggagaaaacttagttacaattcctcaggtgcttttcgtacgattcttaactaaa 213  Q
    ||||||||||||||| |||||||||| || | ||||||||| | ||||||||||||    
T  36278754 taggagaaaacttaggtacaattccttagatacttttcgtatggttcttaactaaa 36278809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 159 - 225
Target Start/End: Complemental strand, 157141 - 157075
Alignment:
Q  159 aggagaaaacttagttacaattcctcaggtgcttttcgtacgattcttaactaaaaatacatatttt 225  Q
    |||||||||||||  ||||||| || |||||||||| |||   |||||| |||||||||||||||||    
T  157141 aggagaaaacttatatacaatttcttaggtgcttttggtatagttcttagctaaaaatacatatttt 157075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 159 - 225
Target Start/End: Original strand, 46664175 - 46664241
Alignment:
Q  159 aggagaaaacttagttacaattcctcaggtgcttttcgtacgattcttaactaaaaatacatatttt 225  Q
    ||||||||| |||| ||||||| || ||||  ||||||||   ||||||||||||||||||||||||    
T  46664175 aggagaaaatttaggtacaatttcttaggtatttttcgtatagttcttaactaaaaatacatatttt 46664241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 160 - 213
Target Start/End: Complemental strand, 22101336 - 22101283
Alignment:
Q  160 ggagaaaacttagttacaattcctcaggtgcttttcgtacgattcttaactaaa 213  Q
    ||||||||||||| |||||||||| | | |||||||||| | ||||||||||||    
T  22101336 ggagaaaacttaggtacaattccttatgagcttttcgtatggttcttaactaaa 22101283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 160 - 213
Target Start/End: Complemental strand, 22176280 - 22176227
Alignment:
Q  160 ggagaaaacttagttacaattcctcaggtgcttttcgtacgattcttaactaaa 213  Q
    ||||||||||||| |||||||||| | |||||||| ||| | ||||||||||||    
T  22176280 ggagaaaacttaggtacaattccttatgtgctttttgtatggttcttaactaaa 22176227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 82 - 123
Target Start/End: Complemental strand, 31105479 - 31105438
Alignment:
Q  82 aatttcattgaaatggttgctaattgttttgatatttactac 123  Q
    ||||||| ||||||||| ||||||| ||||||||||||||||    
T  31105479 aatttcagtgaaatggtagctaattattttgatatttactac 31105438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 161 - 213
Target Start/End: Complemental strand, 8831911 - 8831859
Alignment:
Q  161 gagaaaacttagttacaattcctcaggtgcttttcgtacgattcttaactaaa 213  Q
    |||||||||||| |||||||  | |||||||||||||| | ||||||||||||    
T  8831911 gagaaaacttaggtacaattttttaggtgcttttcgtatggttcttaactaaa 8831859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 189 - 225
Target Start/End: Original strand, 22101193 - 22101229
Alignment:
Q  189 gcttttcgtacgattcttaactaaaaatacatatttt 225  Q
    |||||||||| | ||||||||||||||||||||||||    
T  22101193 gcttttcgtatggttcttaactaaaaatacatatttt 22101229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 189 - 225
Target Start/End: Original strand, 22176137 - 22176173
Alignment:
Q  189 gcttttcgtacgattcttaactaaaaatacatatttt 225  Q
    |||||||||| | ||||||||||||||||||||||||    
T  22176137 gcttttcgtatggttcttaactaaaaatacatatttt 22176173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 52; Significance: 6e-21; HSPs: 33)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 158 - 225
Target Start/End: Complemental strand, 10936643 - 10936576
Alignment:
Q  158 taggagaaaacttagttacaattcctcaggtgcttttcgtacgattcttaactaaaaatacatatttt 225  Q
    ||||||||||||||| |||||||||| |||||||||||||| | ||||||||||||||||||||||||    
T  10936643 taggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaaaatacatatttt 10936576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 159 - 225
Target Start/End: Complemental strand, 20184411 - 20184345
Alignment:
Q  159 aggagaaaacttagttacaattcctcaggtgcttttcgtacgattcttaactaaaaatacatatttt 225  Q
    |||||||||||||| |||||||||| || ||||||||||| ||||||||||||||||||||||||||    
T  20184411 aggagaaaacttaggtacaattccttagctgcttttcgtatgattcttaactaaaaatacatatttt 20184345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 159 - 225
Target Start/End: Complemental strand, 31231788 - 31231722
Alignment:
Q  159 aggagaaaacttagttacaattcctcaggtgcttttcgtacgattcttaactaaaaatacatatttt 225  Q
    |||||||||||||| |||||||||| |||||||||||||| | ||||||||||||||||||||||||    
T  31231788 aggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaaaatacatatttt 31231722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 159 - 225
Target Start/End: Complemental strand, 38528584 - 38528518
Alignment:
Q  159 aggagaaaacttagttacaattcctcaggtgcttttcgtacgattcttaactaaaaatacatatttt 225  Q
    |||||||||||||| |||||||||| |||||||||||||| | ||||||||||||||||||||||||    
T  38528584 aggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaaaatacatatttt 38528518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 158 - 225
Target Start/End: Original strand, 38883219 - 38883286
Alignment:
Q  158 taggagaaaacttagttacaattcctcaggtgcttttcgtacgattcttaactaaaaatacatatttt 225  Q
    ||||||||||||||| |||||||||| || ||||||||||| | ||||||||||||||||||||||||    
T  38883219 taggagaaaacttaggtacaattccttagatgcttttcgtatggttcttaactaaaaatacatatttt 38883286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 159 - 225
Target Start/End: Original strand, 48103367 - 48103433
Alignment:
Q  159 aggagaaaacttagttacaattcctcaggtgcttttcgtacgattcttaactaaaaatacatatttt 225  Q
    |||||||||||||| ||||||| || ||||| |||||||| ||||||||||||||||||||||||||    
T  48103367 aggagaaaacttaggtacaatttcttaggtgtttttcgtatgattcttaactaaaaatacatatttt 48103433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 160 - 225
Target Start/End: Original strand, 34052279 - 34052344
Alignment:
Q  160 ggagaaaacttagttacaattcctcaggtgcttttcgtacgattcttaactaaaaatacatatttt 225  Q
    ||||||||||||| |||| ||||| |||||||||||||| | ||||||||||||||||||||||||    
T  34052279 ggagaaaacttaggtacatttccttaggtgcttttcgtatggttcttaactaaaaatacatatttt 34052344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 161 - 225
Target Start/End: Complemental strand, 35665786 - 35665722
Alignment:
Q  161 gagaaaacttagttacaattcctcaggtgcttttcgtacgattcttaactaaaaatacatatttt 225  Q
    |||||||||||| |||||||||| |||||||||||||| | || |||||||||||||||||||||    
T  35665786 gagaaaacttaggtacaattccttaggtgcttttcgtatggtttttaactaaaaatacatatttt 35665722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 159 - 225
Target Start/End: Original strand, 24836019 - 24836085
Alignment:
Q  159 aggagaaaacttagttacaattcctcaggtgcttttcgtacgattcttaactaaaaatacatatttt 225  Q
    |||||||||||||| ||||||| || |||||||||||||| | |||| |||||||||||||||||||    
T  24836019 aggagaaaacttaggtacaattgcttaggtgcttttcgtatggttctnaactaaaaatacatatttt 24836085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 159 - 225
Target Start/End: Complemental strand, 30259238 - 30259172
Alignment:
Q  159 aggagaaaacttagttacaattcctcaggtgcttttcgtacgattcttaactaaaaatacatatttt 225  Q
    |||||||||||||| ||||||||||  ||||||||| ||| | ||||||||||||||||||||||||    
T  30259238 aggagaaaacttaggtacaattccttgggtgctttttgtatggttcttaactaaaaatacatatttt 30259172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 159 - 225
Target Start/End: Original strand, 30594692 - 30594758
Alignment:
Q  159 aggagaaaacttagttacaattcctcaggtgcttttcgtacgattcttaactaaaaatacatatttt 225  Q
    |||||||||||||| |||||||||| |||||||||||| |   ||||||||||||||||||||||||    
T  30594692 aggagaaaacttaggtacaattccttaggtgcttttcgcatagttcttaactaaaaatacatatttt 30594758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 159 - 225
Target Start/End: Complemental strand, 47237600 - 47237534
Alignment:
Q  159 aggagaaaacttagttacaattcctcaggtgcttttcgtacgattcttaactaaaaatacatatttt 225  Q
    |||||||||||||| ||||||| || |||||||||||||| | ||||||||||||||||||| ||||    
T  47237600 aggagaaaacttaggtacaatttctaaggtgcttttcgtatggttcttaactaaaaatacatttttt 47237534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 160 - 213
Target Start/End: Original strand, 20184238 - 20184291
Alignment:
Q  160 ggagaaaacttagttacaattcctcaggtgcttttcgtacgattcttaactaaa 213  Q
    ||||||||||||| |||||||||| |||||||||||||| ||||||||||||||    
T  20184238 ggagaaaacttaggtacaattccttaggtgcttttcgtatgattcttaactaaa 20184291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 158 - 218
Target Start/End: Original strand, 35665631 - 35665691
Alignment:
Q  158 taggagaaaacttagttacaattcctcaggtgcttttcgtacgattcttaactaaaaatac 218  Q
    ||||||||||||||| ||||||| || |||||||||||||| | |||||||||||||||||    
T  35665631 taggagaaaacttaggtacaattgcttaggtgcttttcgtatggttcttaactaaaaatac 35665691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 159 - 213
Target Start/End: Original strand, 35339277 - 35339331
Alignment:
Q  159 aggagaaaacttagttacaattcctcaggtgcttttcgtacgattcttaactaaa 213  Q
    |||||||||||||| |||||||||| |||||||||||||| | ||||||||||||    
T  35339277 aggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaa 35339331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 160 - 225
Target Start/End: Complemental strand, 3953213 - 3953148
Alignment:
Q  160 ggagaaaacttagttacaattcctcaggtgcttttcgtacgattcttaactaaaaatacatatttt 225  Q
    ||||||||||||| ||||||| || |||| ||||| ||| | ||||||||||||||||||||||||    
T  3953213 ggagaaaacttagatacaattacttaggtactttttgtatggttcttaactaaaaatacatatttt 3953148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 160 - 213
Target Start/End: Original strand, 10936470 - 10936523
Alignment:
Q  160 ggagaaaacttagttacaattcctcaggtgcttttcgtacgattcttaactaaa 213  Q
    ||||||||||||  |||||||||| |||||||||||||||| ||||||||||||    
T  10936470 ggagaaaacttatgtacaattccttaggtgcttttcgtacggttcttaactaaa 10936523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 160 - 213
Target Start/End: Complemental strand, 24836191 - 24836138
Alignment:
Q  160 ggagaaaacttagttacaattcctcaggtgcttttcgtacgattcttaactaaa 213  Q
    ||||||||||||| |||||||||| |||||||||||||| | ||||||||||||    
T  24836191 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaa 24836138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 159 - 212
Target Start/End: Original strand, 33721826 - 33721879
Alignment:
Q  159 aggagaaaacttagttacaattcctcaggtgcttttcgtacgattcttaactaa 212  Q
    |||||||||||||| |||||||||| |||||||||||||| | |||||||||||    
T  33721826 aggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaa 33721879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 160 - 217
Target Start/End: Complemental strand, 38883392 - 38883335
Alignment:
Q  160 ggagaaaacttagttacaattcctcaggtgcttttcgtacgattcttaactaaaaata 217  Q
    ||||||||||||| |||||||||| || ||||||||||| | ||||||||||||||||    
T  38883392 ggagaaaacttaggtacaattccttagatgcttttcgtatggttcttaactaaaaata 38883335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 162 - 225
Target Start/End: Complemental strand, 35339447 - 35339384
Alignment:
Q  162 agaaaacttagttacaattcctcaggtgcttttcgtacgattcttaactaaaaatacatatttt 225  Q
    ||||||||||| |||||||||| | || ||||||||| | ||||||| ||||||||||||||||    
T  35339447 agaaaacttaggtacaattccttatgtacttttcgtatggttcttaaataaaaatacatatttt 35339384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 159 - 225
Target Start/End: Complemental strand, 9285886 - 9285820
Alignment:
Q  159 aggagaaaacttagttacaattcctcaggtgcttttcgtacgattcttaactaaaaatacatatttt 225  Q
    ||||||||| |||| |||||||| | |||| ||||||||| | ||||||| ||||||||||||||||    
T  9285886 aggagaaaatttaggtacaattctttaggtacttttcgtatggttcttaaataaaaatacatatttt 9285820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 159 - 225
Target Start/End: Complemental strand, 9289953 - 9289887
Alignment:
Q  159 aggagaaaacttagttacaattcctcaggtgcttttcgtacgattcttaactaaaaatacatatttt 225  Q
    ||||||||| |||| |||||||| | |||| ||||||||| | ||||||| ||||||||||||||||    
T  9289953 aggagaaaatttaggtacaattctttaggtacttttcgtatggttcttaaataaaaatacatatttt 9289887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 159 - 213
Target Start/End: Complemental strand, 34052451 - 34052397
Alignment:
Q  159 aggagaaaacttagttacaattcctcaggtgcttttcgtacgattcttaactaaa 213  Q
    |||||||||||||| |||||||||| |||||||||||||| | |||||| |||||    
T  34052451 aggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttagctaaa 34052397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 160 - 213
Target Start/End: Original strand, 31231614 - 31231667
Alignment:
Q  160 ggagaaaacttagttacaattcctcaggtgcttttcgtacgattcttaactaaa 213  Q
    ||||||||||||| |||||||||| |||||||||| ||| | ||||||||||||    
T  31231614 ggagaaaacttaggtacaattccttaggtgctttttgtatggttcttaactaaa 31231667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 160 - 225
Target Start/End: Complemental strand, 39618012 - 39617948
Alignment:
Q  160 ggagaaaacttagttacaattcctcaggtgcttttcgtacgattcttaactaaaaatacatatttt 225  Q
    |||||||||||||| ||||||| | ||||||||||||||   |||||||||||||||| |||||||    
T  39618012 ggagaaaacttagt-acaattctttaggtgcttttcgtatagttcttaactaaaaataaatatttt 39617948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 158 - 225
Target Start/End: Complemental strand, 25742604 - 25742537
Alignment:
Q  158 taggagaaaacttagttacaattcctcaggtgcttttcgtacgattcttaactaaaaatacatatttt 225  Q
    ||||||||||||||  | ||||| || | |||||||||||| | || |||||||||||||||||||||    
T  25742604 taggagaaaacttaagtgcaatttcttaagtgcttttcgtatggttgttaactaaaaatacatatttt 25742537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 160 - 219
Target Start/End: Original strand, 29277838 - 29277897
Alignment:
Q  160 ggagaaaacttagttacaattcctcaggtgcttttcgtacgattcttaactaaaaataca 219  Q
    ||||||||||||| |||||||| | |||| ||||| ||| | ||||||||||||||||||    
T  29277838 ggagaaaacttaggtacaattctttaggtactttttgtatggttcttaactaaaaataca 29277897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 158 - 213
Target Start/End: Original strand, 30259064 - 30259119
Alignment:
Q  158 taggagaaaacttagttacaattcctcaggtgcttttcgtacgattcttaactaaa 213  Q
    ||||| ||||||||| |||||||||| ||||||||||| || | ||||||||||||    
T  30259064 taggataaaacttaggtacaattccttaggtgcttttcctatggttcttaactaaa 30259119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 159 - 213
Target Start/End: Complemental strand, 40358290 - 40358233
Alignment:
Q  159 aggagaaaacttagttacaattcctc---aggtgcttttcgtacgattcttaactaaa 213  Q
    |||||||||||||| |||||||||||   ||||||||||| || ||||||||||||||    
T  40358290 aggagaaaacttaggtacaattcctccttaggtgcttttcctatgattcttaactaaa 40358233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 160 - 222
Target Start/End: Original strand, 12142192 - 12142254
Alignment:
Q  160 ggagaaaacttagttacaattcctcaggtgcttttcgtacgattcttaactaaaaatacatat 222  Q
    ||||||||||||| |||||||||| | |||||||  ||| | |||||||||||||||| ||||    
T  12142192 ggagaaaacttaggtacaattccttacgtgctttgggtatggttcttaactaaaaatatatat 12142254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 159 - 225
Target Start/End: Complemental strand, 45997680 - 45997614
Alignment:
Q  159 aggagaaaacttagttacaattcctcaggtgcttttcgtacgattcttaactaaaaatacatatttt 225  Q
    |||||||||| ||| | |||||||| ||||| |||  ||| | ||||||||||||||||||||||||    
T  45997680 aggagaaaacctaggtgcaattccttaggtgttttaggtatggttcttaactaaaaatacatatttt 45997614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 164 - 225
Target Start/End: Original strand, 38528394 - 38528455
Alignment:
Q  164 aaaacttagttacaattcctcaggtgcttttcgtacgattcttaactaaaaatacatatttt 225  Q
    |||| |||| |||||||||| |  ||||||| ||| | ||||||||||||||||||||||||    
T  38528394 aaaagttaggtacaattccttaaatgctttttgtatggttcttaactaaaaatacatatttt 38528455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 52; Significance: 6e-21; HSPs: 51)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 158 - 225
Target Start/End: Complemental strand, 19797154 - 19797087
Alignment:
Q  158 taggagaaaacttagttacaattcctcaggtgcttttcgtacgattcttaactaaaaatacatatttt 225  Q
    ||||||||||||||| |||||||||| |||||||||||||| | ||||||||||||||||||||||||    
T  19797154 taggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaaaatacatatttt 19797087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 159 - 225
Target Start/End: Original strand, 5189468 - 5189534
Alignment:
Q  159 aggagaaaacttagttacaattcctcaggtgcttttcgtacgattcttaactaaaaatacatatttt 225  Q
    |||||||||||||| |||||||||| |||||||||||||| | ||||||||||||||||||||||||    
T  5189468 aggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaaaatacatatttt 5189534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 161 - 225
Target Start/End: Complemental strand, 9978222 - 9978158
Alignment:
Q  161 gagaaaacttagttacaattcctcaggtgcttttcgtacgattcttaactaaaaatacatatttt 225  Q
    |||||||||||| |||||||||| |||||||||||||| | ||||||||||||||||||||||||    
T  9978222 gagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaaaatacatatttt 9978158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 158 - 225
Target Start/End: Complemental strand, 4299568 - 4299501
Alignment:
Q  158 taggagaaaacttagttacaattcctcaggtgcttttcgtacgattcttaactaaaaatacatatttt 225  Q
    ||||||||||||||| |||||||||| ||||| |||||||| | ||||||||||||||||||||||||    
T  4299568 taggagaaaacttaggtacaattccttaggtgtttttcgtatggttcttaactaaaaatacatatttt 4299501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 159 - 222
Target Start/End: Complemental strand, 49285147 - 49285084
Alignment:
Q  159 aggagaaaacttagttacaattcctcaggtgcttttcgtacgattcttaactaaaaatacatat 222  Q
    |||||||||||||| |||||||||| |||||||||||||| | |||||||||||||||||||||    
T  49285147 aggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaaaatacatat 49285084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 158 - 225
Target Start/End: Original strand, 50627129 - 50627196
Alignment:
Q  158 taggagaaaacttagttacaattcctcaggtgcttttcgtacgattcttaactaaaaatacatatttt 225  Q
    ||||||||||||||| |||||||||| || ||||||||||| | ||||||||||||||||||||||||    
T  50627129 taggagaaaacttaggtacaattccttagatgcttttcgtatggttcttaactaaaaatacatatttt 50627196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 159 - 225
Target Start/End: Complemental strand, 3607901 - 3607835
Alignment:
Q  159 aggagaaaacttagttacaattcctcaggtgcttttcgtacgattcttaactaaaaatacatatttt 225  Q
    |||||||||||||| ||||||| || |||||||||||||| | ||||||||||||||||||||||||    
T  3607901 aggagaaaacttaggtacaatttcttaggtgcttttcgtatggttcttaactaaaaatacatatttt 3607835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 159 - 225
Target Start/End: Original strand, 15324625 - 15324691
Alignment:
Q  159 aggagaaaacttagttacaattcctcaggtgcttttcgtacgattcttaactaaaaatacatatttt 225  Q
    |||||||||||||| ||||||| || |||||||||||||| | ||||||||||||||||||||||||    
T  15324625 aggagaaaacttaggtacaatttcttaggtgcttttcgtatggttcttaactaaaaatacatatttt 15324691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 159 - 225
Target Start/End: Complemental strand, 42561467 - 42561401
Alignment:
Q  159 aggagaaaacttagttacaattcctcaggtgcttttcgtacgattcttaactaaaaatacatatttt 225  Q
    |||||||||||||| |||||||||| |||||||||| ||| | ||||||||||||||||||||||||    
T  42561467 aggagaaaacttaggtacaattccttaggtgctttttgtatggttcttaactaaaaatacatatttt 42561401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 159 - 225
Target Start/End: Complemental strand, 47940743 - 47940677
Alignment:
Q  159 aggagaaaacttagttacaattcctcaggtgcttttcgtacgattcttaactaaaaatacatatttt 225  Q
    |||||||||||||| |||||||||| ||||| |||||||| | ||||||||||||||||||||||||    
T  47940743 aggagaaaacttaggtacaattccttaggtgtttttcgtatggttcttaactaaaaatacatatttt 47940677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 160 - 225
Target Start/End: Complemental strand, 27926423 - 27926358
Alignment:
Q  160 ggagaaaacttagttacaattcctcaggtgcttttcgtacgattcttaactaaaaatacatatttt 225  Q
    ||||||||||||  |||||||||| |||||||||||||| | ||||||||||||||||||||||||    
T  27926423 ggagaaaacttatgtacaattccttaggtgcttttcgtatggttcttaactaaaaatacatatttt 27926358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 160 - 225
Target Start/End: Original strand, 40647116 - 40647181
Alignment:
Q  160 ggagaaaacttagttacaattcctcaggtgcttttcgtacgattcttaactaaaaatacatatttt 225  Q
    |||||||||||||||||||||||| || ||||||||||  | ||||||||||||||||||||||||    
T  40647116 ggagaaaacttagttacaattccttagctgcttttcgtgtggttcttaactaaaaatacatatttt 40647181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 161 - 225
Target Start/End: Complemental strand, 14387185 - 14387121
Alignment:
Q  161 gagaaaacttagttacaattcctcaggtgcttttcgtacgattcttaactaaaaatacatatttt 225  Q
    |||||||||||| |||||||||| ||||| |||||||| | ||||||||||||||||||||||||    
T  14387185 gagaaaacttaggtacaattccttaggtgtttttcgtatggttcttaactaaaaatacatatttt 14387121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 158 - 225
Target Start/End: Complemental strand, 2854705 - 2854638
Alignment:
Q  158 taggagaaaacttagttacaattcctcaggtgcttttcgtacgattcttaactaaaaatacatatttt 225  Q
    ||||||||||||||| |||||||||| |||| ||||||||| | |||||||||||||||| |||||||    
T  2854705 taggagaaaacttaggtacaattccttaggtccttttcgtatggttcttaactaaaaatatatatttt 2854638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 158 - 225
Target Start/End: Complemental strand, 48954387 - 48954320
Alignment:
Q  158 taggagaaaacttagttacaattcctcaggtgcttttcgtacgattcttaactaaaaatacatatttt 225  Q
    ||||||||||||||| |||||||||| |||| ||||||||| | |||||||||||||||| |||||||    
T  48954387 taggagaaaacttaggtacaattccttaggtccttttcgtatggttcttaactaaaaatatatatttt 48954320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 159 - 225
Target Start/End: Complemental strand, 19955083 - 19955017
Alignment:
Q  159 aggagaaaacttagttacaattcctcaggtgcttttcgtacgattcttaactaaaaatacatatttt 225  Q
    |||||||||||||| |||||||||| |||| ||||| ||| | ||||||||||||||||||||||||    
T  19955083 aggagaaaacttaggtacaattccttaggtactttttgtatggttcttaactaaaaatacatatttt 19955017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 160 - 225
Target Start/End: Complemental strand, 23698673 - 23698608
Alignment:
Q  160 ggagaaaacttagttacaattcctcaggtgcttttcgtacgattcttaactaaaaatacatatttt 225  Q
    ||||||||||||| |||||||||| |||| ||||||||| | |||||||||||||||| |||||||    
T  23698673 ggagaaaacttaggtacaattccttaggtccttttcgtatggttcttaactaaaaatatatatttt 23698608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 160 - 225
Target Start/End: Complemental strand, 27928469 - 27928404
Alignment:
Q  160 ggagaaaacttagttacaattcctcaggtgcttttcgtacgattcttaactaaaaatacatatttt 225  Q
    ||||||||||||  |||||||||| ||||| |||||||| | ||||||||||||||||||||||||    
T  27928469 ggagaaaacttatgtacaattccttaggtgtttttcgtatggttcttaactaaaaatacatatttt 27928404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 158 - 218
Target Start/End: Complemental strand, 36880684 - 36880624
Alignment:
Q  158 taggagaaaacttagttacaattcctcaggtgcttttcgtacgattcttaactaaaaatac 218  Q
    ||||||||||||||| |||||||||| || ||||||||||| | |||||||||||||||||    
T  36880684 taggagaaaacttaggtacaattccttagatgcttttcgtatggttcttaactaaaaatac 36880624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 158 - 213
Target Start/End: Original strand, 27240922 - 27240977
Alignment:
Q  158 taggagaaaacttagttacaattcctcaggtgcttttcgtacgattcttaactaaa 213  Q
    ||||||||||||||| |||||||||| |||||||||||||| | ||||||||||||    
T  27240922 taggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaa 27240977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 158 - 213
Target Start/End: Complemental strand, 40647291 - 40647236
Alignment:
Q  158 taggagaaaacttagttacaattcctcaggtgcttttcgtacgattcttaactaaa 213  Q
    ||||||||||||||| |||||||||| |||||||||||||| |||| |||||||||    
T  40647291 taggagaaaacttaggtacaattccttaggtgcttttcgtatgatttttaactaaa 40647236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 162 - 225
Target Start/End: Complemental strand, 50162708 - 50162645
Alignment:
Q  162 agaaaacttagttacaattcctcaggtgcttttcgtacgattcttaactaaaaatacatatttt 225  Q
    ||||||||||| |||||||||| |||||||||| ||| | ||||||||||||| ||||||||||    
T  50162708 agaaaacttaggtacaattccttaggtgctttttgtatggttcttaactaaaattacatatttt 50162645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 159 - 225
Target Start/End: Complemental strand, 2125242 - 2125176
Alignment:
Q  159 aggagaaaacttagttacaattcctcaggtgcttttcgtacgattcttaactaaaaatacatatttt 225  Q
    ||||||||| |||| ||||||| || ||||||||||||||   ||||||||||||||||||||||||    
T  2125242 aggagaaaatttaggtacaatttcttaggtgcttttcgtatagttcttaactaaaaatacatatttt 2125176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 159 - 225
Target Start/End: Complemental strand, 27241096 - 27241030
Alignment:
Q  159 aggagaaaacttagttacaattcctcaggtgcttttcgtacgattcttaactaaaaatacatatttt 225  Q
    |||||||||||||| |||||||| | ||||||||| |||| | |||||||||||||||| |||||||    
T  27241096 aggagaaaacttaggtacaattcgttaggtgctttgcgtatggttcttaactaaaaatatatatttt 27241030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 160 - 225
Target Start/End: Original strand, 6079384 - 6079449
Alignment:
Q  160 ggagaaaacttagttacaattcctcaggtgcttttcgtacgattcttaactaaaaatacatatttt 225  Q
    |||||||||| || |||||||||| || || |||||||||| ||||| ||||||||||||||||||    
T  6079384 ggagaaaactcaggtacaattccttagatgtttttcgtacggttcttcactaaaaatacatatttt 6079449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 160 - 225
Target Start/End: Original strand, 21930380 - 21930445
Alignment:
Q  160 ggagaaaacttagttacaattcctcaggtgcttttcgtacgattcttaactaaaaatacatatttt 225  Q
    ||||||| || ||||||||||||| || || |||||||| | ||||||||||||||||||||||||    
T  21930380 ggagaaacctcagttacaattccttagttgtttttcgtatggttcttaactaaaaatacatatttt 21930445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 161 - 225
Target Start/End: Complemental strand, 51276865 - 51276801
Alignment:
Q  161 gagaaaacttagttacaattcctcaggtgcttttcgtacgattcttaactaaaaatacatatttt 225  Q
    |||||||||||| ||||||| || |||||||||||||| | |||||| |||||||||||| ||||    
T  51276865 gagaaaacttaggtacaatttcttaggtgcttttcgtatggttcttagctaaaaatacatttttt 51276801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 159 - 213
Target Start/End: Complemental strand, 362529 - 362475
Alignment:
Q  159 aggagaaaacttagttacaattcctcaggtgcttttcgtacgattcttaactaaa 213  Q
    ||||||||| |||| |||||||| | |||||||||||||| ||||||||||||||    
T  362529 aggagaaaatttaggtacaattctttaggtgcttttcgtatgattcttaactaaa 362475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 159 - 225
Target Start/End: Original strand, 1387779 - 1387843
Alignment:
Q  159 aggagaaaacttagttacaattcctcaggtgcttttcgtacgattcttaactaaaaatacatatttt 225  Q
    ||||||||||||| | ||||||||| || ||||||||||| | ||||||||||||||||||||||||    
T  1387779 aggagaaaacttact-acaattccttag-tgcttttcgtatggttcttaactaaaaatacatatttt 1387843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 159 - 213
Target Start/End: Original strand, 47940569 - 47940623
Alignment:
Q  159 aggagaaaacttagttacaattcctcaggtgcttttcgtacgattcttaactaaa 213  Q
    |||||||||||||| ||||||| || |||||||||||||| | ||||||||||||    
T  47940569 aggagaaaacttaggtacaatttcttaggtgcttttcgtatggttcttaactaaa 47940623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 159 - 217
Target Start/End: Complemental strand, 50627303 - 50627245
Alignment:
Q  159 aggagaaaacttagttacaattcctcaggtgcttttcgtacgattcttaactaaaaata 217  Q
    |||||||||||||| |||||||||| |  ||||||||||| | ||||||||||||||||    
T  50627303 aggagaaaacttaggtacaattccttatatgcttttcgtatggttcttaactaaaaata 50627245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 159 - 225
Target Start/End: Complemental strand, 51789767 - 51789701
Alignment:
Q  159 aggagaaaacttagttacaattcctcaggtgcttttcgtacgattcttaactaaaaatacatatttt 225  Q
    |||||||||||||| |||||||||| |  ||||||||||| | |||||||||||||| |||| ||||    
T  51789767 aggagaaaacttaggtacaattccttaaatgcttttcgtatggttcttaactaaaaacacatttttt 51789701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 161 - 218
Target Start/End: Complemental strand, 1387948 - 1387891
Alignment:
Q  161 gagaaaacttagttacaattcctcaggtgcttttcgtacgattcttaactaaaaatac 218  Q
    ||||||| |||| |||||||||| |||||||||||||| | |||||||||||| ||||    
T  1387948 gagaaaatttaggtacaattccttaggtgcttttcgtatggttcttaactaaagatac 1387891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 160 - 213
Target Start/End: Original strand, 9978051 - 9978104
Alignment:
Q  160 ggagaaaacttagttacaattcctcaggtgcttttcgtacgattcttaactaaa 213  Q
    |||||||| |||| |||||||||| | |||||||||||| ||||||||||||||    
T  9978051 ggagaaaatttaggtacaattccttatgtgcttttcgtatgattcttaactaaa 9978104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 161 - 218
Target Start/End: Original strand, 19796982 - 19797039
Alignment:
Q  161 gagaaaacttagttacaattcctcaggtgcttttcgtacgattcttaactaaaaatac 218  Q
    |||||||||||| ||||||| || |||||||||||||| | || ||||||||||||||    
T  19796982 gagaaaacttaggtacaatttcttaggtgcttttcgtatggtttttaactaaaaatac 19797039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 160 - 212
Target Start/End: Complemental strand, 25298018 - 25297966
Alignment:
Q  160 ggagaaaacttagttacaattcctcaggtgcttttcgtacgattcttaactaa 212  Q
    ||||||||||||| |||||||||| ||||| |||||||| | |||||||||||    
T  25298018 ggagaaaacttaggtacaattccttaggtgtttttcgtatggttcttaactaa 25297966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 158 - 225
Target Start/End: Original strand, 9895251 - 9895318
Alignment:
Q  158 taggagaaaacttagttacaattcctcaggtgcttttcgtacgattcttaactaaaaatacatatttt 225  Q
    |||||||||| |||| || ||||  | |||| ||||||||| | ||||||||||||||||||||||||    
T  9895251 taggagaaaatttaggtataattttttaggtacttttcgtatggttcttaactaaaaatacatatttt 9895318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 160 - 207
Target Start/End: Original strand, 25297922 - 25297968
Alignment:
Q  160 ggagaaaacttagttacaattcctcaggtgcttttcgtacgattctta 207  Q
    |||||||||||||| ||||||||| |||||||||||||| ||||||||    
T  25297922 ggagaaaacttagt-acaattccttaggtgcttttcgtatgattctta 25297968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 158 - 213
Target Start/End: Original strand, 42561293 - 42561348
Alignment:
Q  158 taggagaaaacttagttacaattcctcaggtgcttttcgtacgattcttaactaaa 213  Q
    ||||||||| ||||  |||||||||| |||||||||||||| | ||||||||||||    
T  42561293 taggagaaatcttaagtacaattccttaggtgcttttcgtatggttcttaactaaa 42561348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 159 - 213
Target Start/End: Complemental strand, 957761 - 957707
Alignment:
Q  159 aggagaaaacttagttacaattcctcaggtgcttttcgtacgattcttaactaaa 213  Q
    |||| ||||||||| ||||||| || ||||| |||||||| ||||||||||||||    
T  957761 aggataaaacttagatacaatttcttaggtgtttttcgtatgattcttaactaaa 957707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 159 - 213
Target Start/End: Original strand, 2854531 - 2854585
Alignment:
Q  159 aggagaaaacttagttacaattcctcaggtgcttttcgtacgattcttaactaaa 213  Q
    |||||||||||||| |||||||||| || | ||||||||| | ||||||||||||    
T  2854531 aggagaaaacttaggtacaattccttagatacttttcgtatggttcttaactaaa 2854585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 159 - 213
Target Start/End: Original strand, 19954910 - 19954964
Alignment:
Q  159 aggagaaaacttagttacaattcctcaggtgcttttcgtacgattcttaactaaa 213  Q
    |||||||||||||| |||||||||| | ||||||||||||   ||||||||||||    
T  19954910 aggagaaaacttaggtacaattccttatgtgcttttcgtatagttcttaactaaa 19954964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 159 - 213
Target Start/End: Original strand, 23698501 - 23698555
Alignment:
Q  159 aggagaaaacttagttacaattcctcaggtgcttttcgtacgattcttaactaaa 213  Q
    |||||||||||||| |||||||||| || | ||||||||| | ||||||||||||    
T  23698501 aggagaaaacttaggtacaattccttagatacttttcgtatggttcttaactaaa 23698555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 159 - 225
Target Start/End: Original strand, 36880288 - 36880354
Alignment:
Q  159 aggagaaaacttagttacaattcctcaggtgcttttcgtacgattcttaactaaaaatacatatttt 225  Q
    |||||||||||||| |||||||  | | ||| |||||||| | ||| ||||||||||||||||||||    
T  36880288 aggagaaaacttaggtacaattttttaagtgtttttcgtatggttcctaactaaaaatacatatttt 36880354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 159 - 213
Target Start/End: Original strand, 48954213 - 48954267
Alignment:
Q  159 aggagaaaacttagttacaattcctcaggtgcttttcgtacgattcttaactaaa 213  Q
    |||||||||||||| |||||||||| |||| |||||| || | ||||||||||||    
T  48954213 aggagaaaacttaggtacaattccttaggtacttttcatatggttcttaactaaa 48954267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 159 - 213
Target Start/End: Original strand, 51789596 - 51789650
Alignment:
Q  159 aggagaaaacttagttacaattcctcaggtgcttttcgtacgattcttaactaaa 213  Q
    |||||||||||||| |||||||||| ||||| |||||||| | || |||||||||    
T  51789596 aggagaaaacttaggtacaattccttaggtgattttcgtatggtttttaactaaa 51789650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 160 - 213
Target Start/End: Original strand, 2125070 - 2125123
Alignment:
Q  160 ggagaaaacttagttacaattcctcaggtgcttttcgtacgattcttaactaaa 213  Q
    |||||||| |||||||||||| || | |||||||||||| | ||||||||||||    
T  2125070 ggagaaaatttagttacaatttcttatgtgcttttcgtatggttcttaactaaa 2125123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 160 - 213
Target Start/End: Original strand, 27926251 - 27926304
Alignment:
Q  160 ggagaaaacttagttacaattcctcaggtgcttttcgtacgattcttaactaaa 213  Q
    ||||||||||||| || ||||||| | |||||||||||| | ||||||||||||    
T  27926251 ggagaaaacttaggtataattccttatgtgcttttcgtatggttcttaactaaa 27926304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 189 - 225
Target Start/End: Original strand, 957617 - 957653
Alignment:
Q  189 gcttttcgtacgattcttaactaaaaatacatatttt 225  Q
    |||||||||| ||||||||||||||| ||||||||||    
T  957617 gcttttcgtatgattcttaactaaaattacatatttt 957653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 185 - 225
Target Start/End: Original strand, 26208449 - 26208489
Alignment:
Q  185 aggtgcttttcgtacgattcttaactaaaaatacatatttt 225  Q
    |||||||||||||| | |||| |||||||||||||||||||    
T  26208449 aggtgcttttcgtatggttctcaactaaaaatacatatttt 26208489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 185 - 225
Target Start/End: Complemental strand, 48645159 - 48645120
Alignment:
Q  185 aggtgcttttcgtacgattcttaactaaaaatacatatttt 225  Q
    |||||||||||||| | ||||||||||||||||||||||||    
T  48645159 aggtgcttttcgtagg-ttcttaactaaaaatacatatttt 48645120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 51; Significance: 2e-20; HSPs: 26)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 159 - 225
Target Start/End: Complemental strand, 21380113 - 21380047
Alignment:
Q  159 aggagaaaacttagttacaattcctcaggtgcttttcgtacgattcttaactaaaaatacatatttt 225  Q
    |||||||||||||| |||||||||| |||||||||||||| | ||||||||||||||||||||||||    
T  21380113 aggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaaaatacatatttt 21380047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 160 - 225
Target Start/End: Original strand, 20501706 - 20501771
Alignment:
Q  160 ggagaaaacttagttacaattcctcaggtgcttttcgtacgattcttaactaaaaatacatatttt 225  Q
    |||||||||||||||||||||||| ||||| |||||||| | ||||||||||||||||||||||||    
T  20501706 ggagaaaacttagttacaattccttaggtgtttttcgtatggttcttaactaaaaatacatatttt 20501771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 158 - 225
Target Start/End: Original strand, 885383 - 885450
Alignment:
Q  158 taggagaaaacttagttacaattcctcaggtgcttttcgtacgattcttaactaaaaatacatatttt 225  Q
    ||||||||||||||| |||||||||| |||||||||| ||| | ||||||||||||||||||||||||    
T  885383 taggagaaaacttaggtacaattccttaggtgctttttgtatggttcttaactaaaaatacatatttt 885450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 160 - 225
Target Start/End: Complemental strand, 11687314 - 11687249
Alignment:
Q  160 ggagaaaacttagttacaattcctcaggtgcttttcgtacgattcttaactaaaaatacatatttt 225  Q
    ||||||||||||| |||||||||| || ||||||||||| | ||||||||||||||||||||||||    
T  11687314 ggagaaaacttaggtacaattccttagatgcttttcgtatggttcttaactaaaaatacatatttt 11687249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 161 - 225
Target Start/End: Original strand, 8091063 - 8091127
Alignment:
Q  161 gagaaaacttagttacaattcctcaggtgcttttcgtacgattcttaactaaaaatacatatttt 225  Q
    ||||||| |||| |||||||||| |||||||||||||| | ||||||||||||||||||||||||    
T  8091063 gagaaaatttagatacaattccttaggtgcttttcgtatggttcttaactaaaaatacatatttt 8091127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 174 - 224
Target Start/End: Original strand, 14393575 - 14393625
Alignment:
Q  174 tacaattcctcaggtgcttttcgtacgattcttaactaaaaatacatattt 224  Q
    |||||||||| |||||||||||||| |||||||||||||||||||||||||    
T  14393575 tacaattccttaggtgcttttcgtatgattcttaactaaaaatacatattt 14393625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 160 - 225
Target Start/End: Original strand, 3368985 - 3369050
Alignment:
Q  160 ggagaaaacttagttacaattcctcaggtgcttttcgtacgattcttaactaaaaatacatatttt 225  Q
    |||||||||||   |||||||||| |||||||||||||| | ||||||||||||||||||||||||    
T  3368985 ggagaaaacttgagtacaattccttaggtgcttttcgtatggttcttaactaaaaatacatatttt 3369050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 161 - 218
Target Start/End: Complemental strand, 7808779 - 7808722
Alignment:
Q  161 gagaaaacttagttacaattcctcaggtgcttttcgtacgattcttaactaaaaatac 218  Q
    |||||||||||| |||||||||| |||||||||||||| | |||||||||||||||||    
T  7808779 gagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaaaatac 7808722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 158 - 213
Target Start/End: Complemental strand, 885558 - 885503
Alignment:
Q  158 taggagaaaacttagttacaattcctcaggtgcttttcgtacgattcttaactaaa 213  Q
    ||||||||||||||| |||||||||| ||||||||||| || ||||||||||||||    
T  885558 taggagaaaacttaggtacaattccttaggtgcttttcctatgattcttaactaaa 885503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 158 - 217
Target Start/End: Original strand, 11687141 - 11687200
Alignment:
Q  158 taggagaaaacttagttacaattcctcaggtgcttttcgtacgattcttaactaaaaata 217  Q
    ||||||||||||||| |||||||||| || ||||||||||| | ||||||||||||||||    
T  11687141 taggagaaaacttaggtacaattccttagatgcttttcgtatggttcttaactaaaaata 11687200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 162 - 225
Target Start/End: Complemental strand, 18998286 - 18998223
Alignment:
Q  162 agaaaacttagttacaattcctcaggtgcttttcgtacgattcttaactaaaaatacatatttt 225  Q
    |||||| |||| |||||||||| |||||||||||||| | ||||||| ||||||||||||||||    
T  18998286 agaaaatttagctacaattccttaggtgcttttcgtatggttcttaattaaaaatacatatttt 18998223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 158 - 213
Target Start/End: Original strand, 21379939 - 21379994
Alignment:
Q  158 taggagaaaacttagttacaattcctcaggtgcttttcgtacgattcttaactaaa 213  Q
    ||||||||||||||| |||||||||| |||||||||||||| | ||||||||||||    
T  21379939 taggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaa 21379994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 159 - 225
Target Start/End: Complemental strand, 4890653 - 4890587
Alignment:
Q  159 aggagaaaacttagttacaattcctcaggtgcttttcgtacgattcttaactaaaaatacatatttt 225  Q
    ||||||||| |||| |||||||||| |||||||||||||| | ||||||||||||||  ||||||||    
T  4890653 aggagaaaatttaggtacaattccttaggtgcttttcgtatggttcttaactaaaaacgcatatttt 4890587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 159 - 225
Target Start/End: Original strand, 13439694 - 13439760
Alignment:
Q  159 aggagaaaacttagttacaattcctcaggtgcttttcgtacgattcttaactaaaaatacatatttt 225  Q
    |||||||||||||| |||||||||| | || ||||||||| | |||||| |||||||||||||||||    
T  13439694 aggagaaaacttaggtacaattccttaagtacttttcgtatggttcttagctaaaaatacatatttt 13439760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 159 - 225
Target Start/End: Original strand, 15546631 - 15546697
Alignment:
Q  159 aggagaaaacttagttacaattcctcaggtgcttttcgtacgattcttaactaaaaatacatatttt 225  Q
    |||||||||||||| |||||||||| || || |||| ||| | ||||||||||||||||||||||||    
T  15546631 aggagaaaacttaggtacaattccttagttgttttttgtatggttcttaactaaaaatacatatttt 15546697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 161 - 225
Target Start/End: Original strand, 7808610 - 7808674
Alignment:
Q  161 gagaaaacttagttacaattcctcaggtgcttttcgtacgattcttaactaaaaatacatatttt 225  Q
    |||||||||||| |||||||||| ||||| |||||||  | || |||||||||||||||||||||    
T  7808610 gagaaaacttaggtacaattccttaggtgtttttcgtttggtttttaactaaaaatacatatttt 7808674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 159 - 213
Target Start/End: Complemental strand, 8091234 - 8091180
Alignment:
Q  159 aggagaaaacttagttacaattcctcaggtgcttttcgtacgattcttaactaaa 213  Q
    |||||||||||||| ||||||| || |||||||||||||| | ||||||||||||    
T  8091234 aggagaaaacttaggtacaattgcttaggtgcttttcgtatggttcttaactaaa 8091180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 159 - 213
Target Start/End: Complemental strand, 15546804 - 15546750
Alignment:
Q  159 aggagaaaacttagttacaattcctcaggtgcttttcgtacgattcttaactaaa 213  Q
    |||||||||||||| |||||||||| |||||||||||||| | ||||||| ||||    
T  15546804 aggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaattaaa 15546750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 160 - 213
Target Start/End: Original strand, 18998117 - 18998169
Alignment:
Q  160 ggagaaaacttagttacaattcctcaggtgcttttcgtacgattcttaactaaa 213  Q
    ||||||||||||| |||||||||| ||||| |||||||||| ||||||||||||    
T  18998117 ggagaaaacttaggtacaattccttaggtgtttttcgtacg-ttcttaactaaa 18998169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 158 - 213
Target Start/End: Original strand, 4890478 - 4890533
Alignment:
Q  158 taggagaaaacttagttacaattcctcaggtgcttttcgtacgattcttaactaaa 213  Q
    ||||||||||||||| ||||||| || ||||| |||||||| | ||||||||||||    
T  4890478 taggagaaaacttaggtacaatttcttaggtgtttttcgtatggttcttaactaaa 4890533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 158 - 213
Target Start/End: Complemental strand, 13439869 - 13439814
Alignment:
Q  158 taggagaaaacttagttacaattcctcaggtgcttttcgtacgattcttaactaaa 213  Q
    ||||||||||||||| ||||||| | |||||| |||||||| | ||||||||||||    
T  13439869 taggagaaaacttaggtacaattacgcaggtgtttttcgtatggttcttaactaaa 13439814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 158 - 213
Target Start/End: Complemental strand, 14393737 - 14393682
Alignment:
Q  158 taggagaaaacttagttacaattcctcaggtgcttttcgtacgattcttaactaaa 213  Q
    ||||||||||||||| || ||||||| |||||||||| ||| | ||||||||||||    
T  14393737 taggagaaaacttaggtataattccttaggtgctttttgtatggttcttaactaaa 14393682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 160 - 211
Target Start/End: Original strand, 17367064 - 17367115
Alignment:
Q  160 ggagaaaacttagttacaattcctcaggtgcttttcgtacgattcttaacta 211  Q
    ||||||||||||| |||||||||| | || ||||||||| ||||||||||||    
T  17367064 ggagaaaacttaggtacaattccttatgttcttttcgtatgattcttaacta 17367115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 158 - 225
Target Start/End: Original strand, 29608999 - 29609066
Alignment:
Q  158 taggagaaaacttagttacaattcctcaggtgcttttcgtacgattcttaactaaaaatacatatttt 225  Q
    ||||| ||||||||| |||||||| | | |||||||||||  | ||||||||||||||||||| ||||    
T  29608999 taggacaaaacttaggtacaattctttaagtgcttttcgtgtggttcttaactaaaaatacatctttt 29609066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 159 - 213
Target Start/End: Original strand, 6433689 - 6433743
Alignment:
Q  159 aggagaaaacttagttacaattcctcaggtgcttttcgtacgattcttaactaaa 213  Q
    |||||||||||||| || |||| || |||||||||||||| | ||||||||||||    
T  6433689 aggagaaaacttaggtataatttcttaggtgcttttcgtatggttcttaactaaa 6433743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 164 - 218
Target Start/End: Complemental strand, 20501872 - 20501819
Alignment:
Q  164 aaaacttagttacaattcctcaggtgcttttcgtacgattcttaactaaaaatac 218  Q
    |||||||||| |||||| || |||||||||||||| | |||||||||||||||||    
T  20501872 aaaacttagt-acaatttcttaggtgcttttcgtatggttcttaactaaaaatac 20501819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 51; Significance: 2e-20; HSPs: 36)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 159 - 225
Target Start/End: Original strand, 52824238 - 52824304
Alignment:
Q  159 aggagaaaacttagttacaattcctcaggtgcttttcgtacgattcttaactaaaaatacatatttt 225  Q
    |||||||||||||| |||||||||| |||||||||||||| | ||||||||||||||||||||||||    
T  52824238 aggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaaaatacatatttt 52824304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 160 - 225
Target Start/End: Complemental strand, 530840 - 530775
Alignment:
Q  160 ggagaaaacttagttacaattcctcaggtgcttttcgtacgattcttaactaaaaatacatatttt 225  Q
    ||||||||||||| |||||||||| |||||||||||||| | ||||||||||||||||||||||||    
T  530840 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaaaatacatatttt 530775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 159 - 225
Target Start/End: Original strand, 1298911 - 1298977
Alignment:
Q  159 aggagaaaacttagttacaattcctcaggtgcttttcgtacgattcttaactaaaaatacatatttt 225  Q
    |||||||||||||| |||||||||| |||||||||| ||| | ||||||||||||||||||||||||    
T  1298911 aggagaaaacttaggtacaattccttaggtgctttttgtatggttcttaactaaaaatacatatttt 1298977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 159 - 225
Target Start/End: Complemental strand, 20435312 - 20435246
Alignment:
Q  159 aggagaaaacttagttacaattcctcaggtgcttttcgtacgattcttaactaaaaatacatatttt 225  Q
    |||||||||||||| |||||||| | |||||||||||||| | ||||||||||||||||||||||||    
T  20435312 aggagaaaacttaggtacaattctttaggtgcttttcgtatggttcttaactaaaaatacatatttt 20435246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 161 - 225
Target Start/End: Original strand, 18417658 - 18417722
Alignment:
Q  161 gagaaaacttagttacaattcctcaggtgcttttcgtacgattcttaactaaaaatacatatttt 225  Q
    |||||||||||| |||||||||| |||||||||||||| | |||||||||||||||| |||||||    
T  18417658 gagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaaaatatatatttt 18417722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 160 - 225
Target Start/End: Complemental strand, 24969715 - 24969650
Alignment:
Q  160 ggagaaaacttagttacaattcctcaggtgcttttcgtacgattcttaactaaaaatacatatttt 225  Q
    ||||||||||||| |||||||||| ||||||||||||||   ||||||||||||||||||| ||||    
T  24969715 ggagaaaacttaggtacaattccttaggtgcttttcgtatagttcttaactaaaaatacatttttt 24969650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 161 - 225
Target Start/End: Complemental strand, 42274663 - 42274599
Alignment:
Q  161 gagaaaacttagttacaattcctcaggtgcttttcgtacgattcttaactaaaaatacatatttt 225  Q
    |||||||||||| |||||||||| ||||| |||||||| | |||||||||||||||| |||||||    
T  42274663 gagaaaacttaggtacaattccttaggtgtttttcgtatggttcttaactaaaaatatatatttt 42274599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 158 - 225
Target Start/End: Original strand, 13204375 - 13204442
Alignment:
Q  158 taggagaaaacttagttacaattcctcaggtgcttttcgtacgattcttaactaaaaatacatatttt 225  Q
    ||||||||||||||| ||||||| || |||| ||||| ||| | ||||||||||||||||||||||||    
T  13204375 taggagaaaacttagatacaattacttaggtactttttgtatggttcttaactaaaaatacatatttt 13204442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 160 - 223
Target Start/End: Original strand, 55107524 - 55107587
Alignment:
Q  160 ggagaaaacttagttacaattcctcaggtgcttttcgtacgattcttaactaaaaatacatatt 223  Q
    ||||||||||||| |||||||||| | ||||||||| || | ||||||||||||||||||||||    
T  55107524 ggagaaaacttaggtacaattccttatgtgcttttcatatggttcttaactaaaaatacatatt 55107587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 159 - 213
Target Start/End: Original strand, 24915793 - 24915847
Alignment:
Q  159 aggagaaaacttagttacaattcctcaggtgcttttcgtacgattcttaactaaa 213  Q
    |||||||||||||| |||||||||| |||||||||||||| | ||||||||||||    
T  24915793 aggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaa 24915847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 160 - 217
Target Start/End: Complemental strand, 23928738 - 23928681
Alignment:
Q  160 ggagaaaacttagttacaattcctcaggtgcttttcgtacgattcttaactaaaaata 217  Q
    ||||||||||||  |||||||||| ||||||||| |||| ||||||||||||||||||    
T  23928738 ggagaaaacttatgtacaattccttaggtgctttgcgtatgattcttaactaaaaata 23928681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 161 - 225
Target Start/End: Complemental strand, 4688418 - 4688354
Alignment:
Q  161 gagaaaacttagttacaattcctcaggtgcttttcgtacgattcttaactaaaaatacatatttt 225  Q
    |||||||||||| |||||||||| || || |||||||| | ||||||| ||||||||||||||||    
T  4688418 gagaaaacttaggtacaattccttagatgattttcgtatggttcttaattaaaaatacatatttt 4688354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 158 - 213
Target Start/End: Complemental strand, 1299085 - 1299030
Alignment:
Q  158 taggagaaaacttagttacaattcctcaggtgcttttcgtacgattcttaactaaa 213  Q
    ||||||||||||||| |||||||||| ||||||||||| || | ||||||||||||    
T  1299085 taggagaaaacttaggtacaattccttaggtgcttttcttatggttcttaactaaa 1299030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 158 - 225
Target Start/End: Complemental strand, 28810020 - 28809953
Alignment:
Q  158 taggagaaaacttagttacaattcctcaggtgcttttcgtacgattcttaactaaaaatacatatttt 225  Q
    ||||||||||||||| ||||||| || || ||||||| ||| | |||||||||| |||||||||||||    
T  28810020 taggagaaaacttaggtacaatttcttagctgcttttggtatggttcttaactagaaatacatatttt 28809953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 159 - 213
Target Start/End: Original strand, 530668 - 530722
Alignment:
Q  159 aggagaaaacttagttacaattcctcaggtgcttttcgtacgattcttaactaaa 213  Q
    |||||||||||||| |||||||||| |||||||||| ||| | ||||||||||||    
T  530668 aggagaaaacttaggtacaattccttaggtgctttttgtatggttcttaactaaa 530722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 159 - 225
Target Start/End: Original strand, 4552784 - 4552850
Alignment:
Q  159 aggagaaaacttagttacaattcctcaggtgcttttcgtacgattcttaactaaaaatacatatttt 225  Q
    |||||||||||||| |||||||||| | ||||||||| || | || ||||||||||||| |||||||    
T  4552784 aggagaaaacttaggtacaattccttaagtgcttttcatatggtttttaactaaaaataaatatttt 4552850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 159 - 213
Target Start/End: Original strand, 42274491 - 42274545
Alignment:
Q  159 aggagaaaacttagttacaattcctcaggtgcttttcgtacgattcttaactaaa 213  Q
    |||||||||||||| |||||||||| || ||||||||||| | ||||||||||||    
T  42274491 aggagaaaacttaggtacaattccttagatgcttttcgtatggttcttaactaaa 42274545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 160 - 213
Target Start/End: Complemental strand, 27434781 - 27434728
Alignment:
Q  160 ggagaaaacttagttacaattcctcaggtgcttttcgtacgattcttaactaaa 213  Q
    ||||||||||||  |||||||||| |||||||||||||| | ||||||||||||    
T  27434781 ggagaaaacttaagtacaattccttaggtgcttttcgtatggttcttaactaaa 27434728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 161 - 213
Target Start/End: Original strand, 4688248 - 4688300
Alignment:
Q  161 gagaaaacttagttacaattcctcaggtgcttttcgtacgattcttaactaaa 213  Q
    |||||||||||| ||||||| || |||||||||||||| | ||||||||||||    
T  4688248 gagaaaacttaggtacaatttcttaggtgcttttcgtatggttcttaactaaa 4688300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 161 - 213
Target Start/End: Original strand, 32318721 - 32318773
Alignment:
Q  161 gagaaaacttagttacaattcctcaggtgcttttcgtacgattcttaactaaa 213  Q
    |||||||||||| |||||||||| | |||||||||||| | ||||||||||||    
T  32318721 gagaaaacttaggtacaattccttatgtgcttttcgtatggttcttaactaaa 32318773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 159 - 218
Target Start/End: Original strand, 11330105 - 11330164
Alignment:
Q  159 aggagaaaacttagttacaattcctcaggtgcttttcgtacgattcttaactaaaaatac 218  Q
    |||||||||||||| ||||||| || || |||||||| || ||||||||||| |||||||    
T  11330105 aggagaaaacttagatacaatttcttagatgcttttcatatgattcttaactgaaaatac 11330164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 158 - 213
Target Start/End: Complemental strand, 18417830 - 18417775
Alignment:
Q  158 taggagaaaacttagttacaattcctcaggtgcttttcgtacgattcttaactaaa 213  Q
    ||||||||||||||| |||||||||| |||||||||| ||| | ||||||| ||||    
T  18417830 taggagaaaacttaggtacaattccttaggtgctttttgtatggttcttaattaaa 18417775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 186 - 225
Target Start/End: Original strand, 24294493 - 24294532
Alignment:
Q  186 ggtgcttttcgtacgattcttaactaaaaatacatatttt 225  Q
    ||||||||||||| ||||||||| ||||||||||||||||    
T  24294493 ggtgcttttcgtatgattcttaattaaaaatacatatttt 24294532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 162 - 213
Target Start/End: Original strand, 24969543 - 24969594
Alignment:
Q  162 agaaaacttagttacaattcctcaggtgcttttcgtacgattcttaactaaa 213  Q
    ||||||||||| |||||||| | |||||||||||||| | ||||||||||||    
T  24969543 agaaaacttaggtacaattctttaggtgcttttcgtatggttcttaactaaa 24969594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 158 - 225
Target Start/End: Original strand, 27434608 - 27434675
Alignment:
Q  158 taggagaaaacttagttacaattcctcaggtgcttttcgtacgattcttaactaaaaatacatatttt 225  Q
    ||||||||||||||| ||||||| || | |||||||| |||   ||||||||||||||||||| ||||    
T  27434608 taggagaaaacttaggtacaatttcttatgtgctttttgtatagttcttaactaaaaatacatttttt 27434675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 159 - 213
Target Start/End: Original strand, 21048704 - 21048758
Alignment:
Q  159 aggagaaaacttagttacaattcctcaggtgcttttcgtacgattcttaactaaa 213  Q
    |||||||||||||| |||||||| | || ||||||||||| | ||||||||||||    
T  21048704 aggagaaaacttaggtacaattcgttagatgcttttcgtatggttcttaactaaa 21048758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 159 - 213
Target Start/End: Original strand, 23928567 - 23928620
Alignment:
Q  159 aggagaaaacttagttacaattcctcaggtgcttttcgtacgattcttaactaaa 213  Q
    |||||||||||||| |||||||||| | ||| |||||||| ||||||||||||||    
T  23928567 aggagaaaacttaggtacaattcctta-gtgtttttcgtatgattcttaactaaa 23928620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 159 - 225
Target Start/End: Complemental strand, 32318892 - 32318826
Alignment:
Q  159 aggagaaaacttagttacaattcctcaggtgcttttcgtacgattcttaactaaaaatacatatttt 225  Q
    ||||||||| |||  |||||||| | ||||||||||| || ||||||||| |||||||| |||||||    
T  32318892 aggagaaaatttaagtacaattctttaggtgcttttcatatgattcttaattaaaaatatatatttt 32318826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 159 - 225
Target Start/End: Original strand, 35360676 - 35360741
Alignment:
Q  159 aggagaaaacttagttacaattcctcaggtgcttttcgtacgattcttaactaaaaatacatatttt 225  Q
    ||||||||||||||| ||||||  | ||||  |||||||| | ||||||||||||||||||||||||    
T  35360676 aggagaaaacttagt-acaatttattaggtatttttcgtatggttcttaactaaaaatacatatttt 35360741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 159 - 213
Target Start/End: Original strand, 43486199 - 43486253
Alignment:
Q  159 aggagaaaacttagttacaattcctcaggtgcttttcgtacgattcttaactaaa 213  Q
    |||||||||||||| |||||||||| |||| |||||| || | ||||||||||||    
T  43486199 aggagaaaacttaggtacaattccttaggtacttttcctatggttcttaactaaa 43486253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 159 - 217
Target Start/End: Complemental strand, 47465156 - 47465098
Alignment:
Q  159 aggagaaaacttagttacaattcctcaggtgcttttcgtacgattcttaactaaaaata 217  Q
    |||| ||||||||| |||||||| | ||||||||||| || |||| |||||||||||||    
T  47465156 aggacaaaacttaggtacaattctttaggtgcttttcatatgatttttaactaaaaata 47465098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 159 - 213
Target Start/End: Complemental strand, 55107696 - 55107642
Alignment:
Q  159 aggagaaaacttagttacaattcctcaggtgcttttcgtacgattcttaactaaa 213  Q
    |||||||||||||| |||||||||| |||||||||| ||| | ||||| ||||||    
T  55107696 aggagaaaacttaggtacaattccttaggtgctttttgtatggttctttactaaa 55107642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 160 - 213
Target Start/End: Original strand, 20435140 - 20435193
Alignment:
Q  160 ggagaaaacttagttacaattcctcaggtgcttttcgtacgattcttaactaaa 213  Q
    ||||||||||||  |||||||||| || ||||||||||| | ||||||||||||    
T  20435140 ggagaaaacttatatacaattccttagatgcttttcgtatggttcttaactaaa 20435193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 162 - 215
Target Start/End: Complemental strand, 37525112 - 37525059
Alignment:
Q  162 agaaaacttagttacaattcctcaggtgcttttcgtacgattcttaactaaaaa 215  Q
    ||||||||||| |||||||| | |||||||||||||  | ||||||||||||||    
T  37525112 agaaaacttaggtacaattctttaggtgcttttcgtgtggttcttaactaaaaa 37525059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 160 - 213
Target Start/End: Original strand, 55049400 - 55049453
Alignment:
Q  160 ggagaaaacttagttacaattcctcaggtgcttttcgtacgattcttaactaaa 213  Q
    ||||||||||||  |||||||||| ||||||||||||||   ||||||||||||    
T  55049400 ggagaaaacttatgtacaattccttaggtgcttttcgtatagttcttaactaaa 55049453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 158 - 198
Target Start/End: Original strand, 3422427 - 3422467
Alignment:
Q  158 taggagaaaacttagttacaattcctcaggtgcttttcgta 198  Q
    ||||||||||||||| ||||||| || ||||||||||||||    
T  3422427 taggagaaaacttaggtacaatttcttaggtgcttttcgta 3422467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 51; Significance: 2e-20; HSPs: 35)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 159 - 225
Target Start/End: Original strand, 16705732 - 16705798
Alignment:
Q  159 aggagaaaacttagttacaattcctcaggtgcttttcgtacgattcttaactaaaaatacatatttt 225  Q
    |||||||||||||| |||||||||| |||||||||||||| | ||||||||||||||||||||||||    
T  16705732 aggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaaaatacatatttt 16705798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 165 - 225
Target Start/End: Original strand, 2818671 - 2818731
Alignment:
Q  165 aaacttagttacaattcctcaggtgcttttcgtacgattcttaactaaaaatacatatttt 225  Q
    |||||||| |||||||||| |||||||||||||| ||||||||||||||||||||||||||    
T  2818671 aaacttaggtacaattccttaggtgcttttcgtatgattcttaactaaaaatacatatttt 2818731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 158 - 225
Target Start/End: Complemental strand, 1924154 - 1924087
Alignment:
Q  158 taggagaaaacttagttacaattcctcaggtgcttttcgtacgattcttaactaaaaatacatatttt 225  Q
    ||||||||||||||| |||||||||| ||||| |||||||| | ||||||||||||||||||||||||    
T  1924154 taggagaaaacttaggtacaattccttaggtgtttttcgtatggttcttaactaaaaatacatatttt 1924087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 158 - 225
Target Start/End: Original strand, 23835874 - 23835941
Alignment:
Q  158 taggagaaaacttagttacaattcctcaggtgcttttcgtacgattcttaactaaaaatacatatttt 225  Q
    ||||||||||||||  |||||||||| |||||||||||||| | ||||||||||||||||||||||||    
T  23835874 taggagaaaacttatgtacaattccttaggtgcttttcgtatggttcttaactaaaaatacatatttt 23835941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 159 - 225
Target Start/End: Original strand, 20892883 - 20892949
Alignment:
Q  159 aggagaaaacttagttacaattcctcaggtgcttttcgtacgattcttaactaaaaatacatatttt 225  Q
    |||||||||||||| ||||||| || |||||||||||||| | ||||||||||||||||||||||||    
T  20892883 aggagaaaacttaggtacaatttcttaggtgcttttcgtatggttcttaactaaaaatacatatttt 20892949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 160 - 225
Target Start/End: Complemental strand, 12850713 - 12850648
Alignment:
Q  160 ggagaaaacttagttacaattcctcaggtgcttttcgtacgattcttaactaaaaatacatatttt 225  Q
    ||||||||||||| | ||||||||||| ||||||||||| | ||||||||||||||||||||||||    
T  12850713 ggagaaaacttaggtccaattcctcagatgcttttcgtatggttcttaactaaaaatacatatttt 12850648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 160 - 225
Target Start/End: Original strand, 22269722 - 22269787
Alignment:
Q  160 ggagaaaacttagttacaattcctcaggtgcttttcgtacgattcttaactaaaaatacatatttt 225  Q
    ||||||||||||| |||||||||| ||||| |||||||| |||| |||||||||||||||||||||    
T  22269722 ggagaaaacttaggtacaattccttaggtgtttttcgtatgatttttaactaaaaatacatatttt 22269787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 160 - 225
Target Start/End: Complemental strand, 24102003 - 24101938
Alignment:
Q  160 ggagaaaacttagttacaattcctcaggtgcttttcgtacgattcttaactaaaaatacatatttt 225  Q
    ||||||||||||  |||||||||| |||||||||||||| | ||||||||||||||||||||||||    
T  24102003 ggagaaaacttaagtacaattccttaggtgcttttcgtatggttcttaactaaaaatacatatttt 24101938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 160 - 225
Target Start/End: Original strand, 34455885 - 34455950
Alignment:
Q  160 ggagaaaacttagttacaattcctcaggtgcttttcgtacgattcttaactaaaaatacatatttt 225  Q
    ||||||||||||| |||||||||| |||||||||||||| | ||||||| ||||||||||||||||    
T  34455885 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaattaaaaatacatatttt 34455950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 161 - 225
Target Start/End: Original strand, 7737065 - 7737129
Alignment:
Q  161 gagaaaacttagttacaattcctcaggtgcttttcgtacgattcttaactaaaaatacatatttt 225  Q
    |||||||||||| ||||||| || |||||||||| ||| ||||||||||||||||||||||||||    
T  7737065 gagaaaacttaggtacaatttcttaggtgcttttggtatgattcttaactaaaaatacatatttt 7737129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 158 - 218
Target Start/End: Complemental strand, 34490629 - 34490569
Alignment:
Q  158 taggagaaaacttagttacaattcctcaggtgcttttcgtacgattcttaactaaaaatac 218  Q
    ||||||||||||||| |||||||||| |||||||||||||| | |||||||||||||||||    
T  34490629 taggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaaaatac 34490569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 158 - 225
Target Start/End: Original strand, 3116874 - 3116941
Alignment:
Q  158 taggagaaaacttagttacaattcctcaggtgcttttcgtacgattcttaactaaaaatacatatttt 225  Q
    ||||||||||||||| |||||||| |  ||||||||||||| | ||||||||||||||||||||||||    
T  3116874 taggagaaaacttaggtacaattcttttggtgcttttcgtatggttcttaactaaaaatacatatttt 3116941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 158 - 225
Target Start/End: Complemental strand, 9281520 - 9281453
Alignment:
Q  158 taggagaaaacttagttacaattcctcaggtgcttttcgtacgattcttaactaaaaatacatatttt 225  Q
    ||||||||||||||| |||||||||| |||| ||||||||| | |||||||||||||||| |||||||    
T  9281520 taggagaaaacttaggtacaattccttaggtccttttcgtatggttcttaactaaaaatatatatttt 9281453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 158 - 225
Target Start/End: Original strand, 34490454 - 34490521
Alignment:
Q  158 taggagaaaacttagttacaattcctcaggtgcttttcgtacgattcttaactaaaaatacatatttt 225  Q
    ||||||||||||||| |||||||| | ||||| |||||||| | ||||||||||||||||||||||||    
T  34490454 taggagaaaacttaggtacaattctttaggtgtttttcgtatggttcttaactaaaaatacatatttt 34490521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 159 - 213
Target Start/End: Complemental strand, 7737237 - 7737183
Alignment:
Q  159 aggagaaaacttagttacaattcctcaggtgcttttcgtacgattcttaactaaa 213  Q
    |||||||||||||| |||||||||| |||||||||||||| ||||||||||||||    
T  7737237 aggagaaaacttaggtacaattccttaggtgcttttcgtatgattcttaactaaa 7737183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 159 - 225
Target Start/End: Complemental strand, 9933741 - 9933675
Alignment:
Q  159 aggagaaaacttagttacaattcctcaggtgcttttcgtacgattcttaactaaaaatacatatttt 225  Q
    ||||||||| |||| ||||||| || |||||||||||||| | ||||||||||||||||||||||||    
T  9933741 aggagaaaatttaggtacaatttcttaggtgcttttcgtatggttcttaactaaaaatacatatttt 9933675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 159 - 225
Target Start/End: Complemental strand, 42713950 - 42713884
Alignment:
Q  159 aggagaaaacttagttacaattcctcaggtgcttttcgtacgattcttaactaaaaatacatatttt 225  Q
    |||||||||||||| ||||||| || | |||||||||| | ||||||||||||||||||||||||||    
T  42713950 aggagaaaacttaggtacaatttcttaagtgcttttcgcatgattcttaactaaaaatacatatttt 42713884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 159 - 225
Target Start/End: Original strand, 45408624 - 45408690
Alignment:
Q  159 aggagaaaacttagttacaattcctcaggtgcttttcgtacgattcttaactaaaaatacatatttt 225  Q
    |||||||||||||| |||||||||| ||||| |||| ||| | ||||||||||||||||||||||||    
T  45408624 aggagaaaacttaggtacaattccttaggtgttttttgtatggttcttaactaaaaatacatatttt 45408690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 159 - 219
Target Start/End: Complemental strand, 20893056 - 20892997
Alignment:
Q  159 aggagaaaacttagttacaattcctcaggtgcttttcgtacgattcttaactaaaaataca 219  Q
    ||||||||||||||| | ||||||| |||||||||||||| ||||||||||||||||||||    
T  20893056 aggagaaaacttagt-ataattccttaggtgcttttcgtatgattcttaactaaaaataca 20892997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 158 - 223
Target Start/End: Original strand, 6605736 - 6605798
Alignment:
Q  158 taggagaaaacttagttacaattcctcaggtgcttttcgtacgattcttaactaaaaatacatatt 223  Q
    ||||||||||||||| |||||||||| | |||||||||||   |||||||||||||||||||||||    
T  6605736 taggagaaaacttaggtacaattccttatgtgcttttcgt---attcttaactaaaaatacatatt 6605798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 159 - 218
Target Start/End: Original strand, 24101831 - 24101890
Alignment:
Q  159 aggagaaaacttagttacaattcctcaggtgcttttcgtacgattcttaactaaaaatac 218  Q
    |||||||||||||| |||||||||| |||||||||||||| | |||||||||||| ||||    
T  24101831 aggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaatatac 24101890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 161 - 213
Target Start/End: Complemental strand, 10553051 - 10552999
Alignment:
Q  161 gagaaaacttagttacaattcctcaggtgcttttcgtacgattcttaactaaa 213  Q
    |||||||||||| |||||||||| ||||| |||||||| ||||||||||||||    
T  10553051 gagaaaacttaggtacaattccttaggtgtttttcgtatgattcttaactaaa 10552999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 159 - 213
Target Start/End: Original strand, 1923979 - 1924033
Alignment:
Q  159 aggagaaaacttagttacaattcctcaggtgcttttcgtacgattcttaactaaa 213  Q
    |||||||||||||| ||||||| || |||||||||||||| | ||||||||||||    
T  1923979 aggagaaaacttaggtacaatttcttaggtgcttttcgtatggttcttaactaaa 1924033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 159 - 225
Target Start/End: Original strand, 27920572 - 27920637
Alignment:
Q  159 aggagaaaacttagttacaattcctcaggtgcttttcgtacgattcttaactaaaaatacatatttt 225  Q
    ||||||||||||||| |||||| || |||||||||||||| |  |||||||||||| ||||||||||    
T  27920572 aggagaaaacttagt-acaatttcttaggtgcttttcgtatgggtcttaactaaaactacatatttt 27920637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 158 - 215
Target Start/End: Complemental strand, 22269895 - 22269838
Alignment:
Q  158 taggagaaaacttagttacaattcctcaggtgcttttcgtacgattcttaactaaaaa 215  Q
    ||||||||||||||  |||||||||| || ||||||||||| | ||||||||||||||    
T  22269895 taggagaaaacttacgtacaattccttagatgcttttcgtatggttcttaactaaaaa 22269838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 160 - 225
Target Start/End: Complemental strand, 29229534 - 29229470
Alignment:
Q  160 ggagaaaacttagttacaattcctcaggtgcttttcgtacgattcttaactaaaaatacatatttt 225  Q
    |||||||||||||| ||||||| | || | ||||||||| | ||||||||||||||||||||||||    
T  29229534 ggagaaaacttagt-acaattctttagttacttttcgtatggttcttaactaaaaatacatatttt 29229470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 160 - 225
Target Start/End: Complemental strand, 29342834 - 29342770
Alignment:
Q  160 ggagaaaacttagttacaattcctcaggtgcttttcgtacgattcttaactaaaaatacatatttt 225  Q
    |||||||||||||| ||||||| | || | ||||||||| | ||||||||||||||||||||||||    
T  29342834 ggagaaaacttagt-acaattctttagttacttttcgtatggttcttaactaaaaatacatatttt 29342770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 160 - 213
Target Start/End: Complemental strand, 45408796 - 45408743
Alignment:
Q  160 ggagaaaacttagttacaattcctcaggtgcttttcgtacgattcttaactaaa 213  Q
    ||||||||||||| |||||||||| |||||||||||||| | ||||||| ||||    
T  45408796 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaattaaa 45408743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 161 - 225
Target Start/End: Complemental strand, 9850923 - 9850863
Alignment:
Q  161 gagaaaacttagttacaattcctcaggtgcttttcgtacgattcttaactaaaaatacatatttt 225  Q
    |||||||||||| |||||||||    ||| |||||||| | ||||||||||||||||||||||||    
T  9850923 gagaaaacttaggtacaattcc----gtgtttttcgtatggttcttaactaaaaatacatatttt 9850863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 162 - 225
Target Start/End: Original strand, 43475946 - 43476009
Alignment:
Q  162 agaaaacttagttacaattcctcaggtgcttttcgtacgattcttaactaaaaatacatatttt 225  Q
    ||||||||||  |||||||||||||||| |||||||| | || | ||||||||||| |||||||    
T  43475946 agaaaacttatgtacaattcctcaggtgattttcgtatggttttaaactaaaaatatatatttt 43476009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 159 - 213
Target Start/End: Complemental strand, 3117048 - 3116994
Alignment:
Q  159 aggagaaaacttagttacaattcctcaggtgcttttcgtacgattcttaactaaa 213  Q
    |||||||||||||| |||||||||  || ||||||||||| | ||||||||||||    
T  3117048 aggagaaaacttaggtacaattccatagctgcttttcgtatggttcttaactaaa 3116994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 159 - 213
Target Start/End: Complemental strand, 43858606 - 43858552
Alignment:
Q  159 aggagaaaacttagttacaattcctcaggtgcttttcgtacgattcttaactaaa 213  Q
    ||||||||| |||| |||||||||| |||| ||||||||| | ||||||||||||    
T  43858606 aggagaaaatttaggtacaattccttaggtacttttcgtatggttcttaactaaa 43858552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 160 - 213
Target Start/End: Complemental strand, 2818837 - 2818784
Alignment:
Q  160 ggagaaaacttagttacaattcctcaggtgcttttcgtacgattcttaactaaa 213  Q
    ||||||||||||| |||||||| | ||||| |||||||| | ||||||||||||    
T  2818837 ggagaaaacttaggtacaattctttaggtgtttttcgtatggttcttaactaaa 2818784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 160 - 213
Target Start/End: Complemental strand, 16705904 - 16705851
Alignment:
Q  160 ggagaaaacttagttacaattcctcaggtgcttttcgtacgattcttaactaaa 213  Q
    |||||||| |||| |||||||||| |||||||||||||| | || |||||||||    
T  16705904 ggagaaaatttaggtacaattccttaggtgcttttcgtatggtttttaactaaa 16705851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 160 - 212
Target Start/End: Complemental strand, 8111744 - 8111692
Alignment:
Q  160 ggagaaaacttagttacaattcctcaggtgcttttcgtacgattcttaactaa 212  Q
    ||||||||||||||||||||| || |||| ||||| ||| | |||||||||||    
T  8111744 ggagaaaacttagttacaatttcttaggtcctttttgtatggttcttaactaa 8111692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 50; Significance: 9e-20; HSPs: 24)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 160 - 225
Target Start/End: Complemental strand, 23940976 - 23940911
Alignment:
Q  160 ggagaaaacttagttacaattcctcaggtgcttttcgtacgattcttaactaaaaatacatatttt 225  Q
    |||||||||||||||||||||||| |||||||||||||| | || |||||||||||||||||||||    
T  23940976 ggagaaaacttagttacaattccttaggtgcttttcgtatggtttttaactaaaaatacatatttt 23940911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 158 - 225
Target Start/End: Original strand, 8210321 - 8210388
Alignment:
Q  158 taggagaaaacttagttacaattcctcaggtgcttttcgtacgattcttaactaaaaatacatatttt 225  Q
    ||||||||||||||| |||||||||| |||||||||||||| |||||||||||||| ||| |||||||    
T  8210321 taggagaaaacttaggtacaattccttaggtgcttttcgtatgattcttaactaaatatatatatttt 8210388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 159 - 225
Target Start/End: Original strand, 15882199 - 15882265
Alignment:
Q  159 aggagaaaacttagttacaattcctcaggtgcttttcgtacgattcttaactaaaaatacatatttt 225  Q
    |||||||||||||| |||||||||| |||||||||| ||| | ||||||||||||||||||||||||    
T  15882199 aggagaaaacttaggtacaattccttaggtgctttttgtatggttcttaactaaaaatacatatttt 15882265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 161 - 225
Target Start/End: Original strand, 37114239 - 37114303
Alignment:
Q  161 gagaaaacttagttacaattcctcaggtgcttttcgtacgattcttaactaaaaatacatatttt 225  Q
    |||||||||||| |||||||||| |||||||||||||| | ||||||| ||||||||||||||||    
T  37114239 gagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaattaaaaatacatatttt 37114303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 158 - 225
Target Start/End: Original strand, 4035739 - 4035806
Alignment:
Q  158 taggagaaaacttagttacaattcctcaggtgcttttcgtacgattcttaactaaaaatacatatttt 225  Q
    ||||||||||||||| |||| |||||||||||||||||||| | | |||||||||||||| |||||||    
T  4035739 taggagaaaacttaggtacagttcctcaggtgcttttcgtatggtacttaactaaaaatatatatttt 4035806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 159 - 225
Target Start/End: Complemental strand, 29781131 - 29781065
Alignment:
Q  159 aggagaaaacttagttacaattcctcaggtgcttttcgtacgattcttaactaaaaatacatatttt 225  Q
    |||||||||||||| | |||||||| || ||||||||||| | ||||||||||||||||||||||||    
T  29781131 aggagaaaacttaggtccaattccttagatgcttttcgtatggttcttaactaaaaatacatatttt 29781065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 160 - 225
Target Start/End: Complemental strand, 24211449 - 24211384
Alignment:
Q  160 ggagaaaacttagttacaattcctcaggtgcttttcgtacgattcttaactaaaaatacatatttt 225  Q
    ||||||||||||| |||||||||| |||||||||||||| | ||||||| || |||||||||||||    
T  24211449 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaaatagaaatacatatttt 24211384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 161 - 225
Target Start/End: Complemental strand, 33100815 - 33100751
Alignment:
Q  161 gagaaaacttagttacaattcctcaggtgcttttcgtacgattcttaactaaaaatacatatttt 225  Q
    |||||||||||| ||||||| || | |||||||||||||| |||||||||||||| |||||||||    
T  33100815 gagaaaacttaggtacaatttcttatgtgcttttcgtacggttcttaactaaaaaaacatatttt 33100751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 159 - 225
Target Start/End: Original strand, 12234465 - 12234531
Alignment:
Q  159 aggagaaaacttagttacaattcctcaggtgcttttcgtacgattcttaactaaaaatacatatttt 225  Q
    |||||||||||||| || ||||| |  ||||||||||||| | ||||||||||||||||||||||||    
T  12234465 aggagaaaacttaggtataattctttgggtgcttttcgtatggttcttaactaaaaatacatatttt 12234531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 159 - 213
Target Start/End: Complemental strand, 15882373 - 15882319
Alignment:
Q  159 aggagaaaacttagttacaattcctcaggtgcttttcgtacgattcttaactaaa 213  Q
    |||||||||||||| |||||||||| |||||||||||||| | ||||||||||||    
T  15882373 aggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaa 15882319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 160 - 218
Target Start/End: Original strand, 33100645 - 33100703
Alignment:
Q  160 ggagaaaacttagttacaattcctcaggtgcttttcgtacgattcttaactaaaaatac 218  Q
    ||||||||||||| ||||||| || |||||||||||||| | |||||||||||||||||    
T  33100645 ggagaaaacttaggtacaatttcttaggtgcttttcgtatggttcttaactaaaaatac 33100703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 161 - 225
Target Start/End: Complemental strand, 5356294 - 5356230
Alignment:
Q  161 gagaaaacttagttacaattcctcaggtgcttttcgtacgattcttaactaaaaatacatatttt 225  Q
    |||||||||||| ||||||| |  ||||| |||||||| ||||||||| ||||||||||||||||    
T  5356294 gagaaaacttagatacaatttcgtaggtgtttttcgtatgattcttaattaaaaatacatatttt 5356230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 158 - 225
Target Start/End: Complemental strand, 11828776 - 11828709
Alignment:
Q  158 taggagaaaacttagttacaattcctcaggtgcttttcgtacgattcttaactaaaaatacatatttt 225  Q
    ||||||||||||||| |||||||||| |  |||||||| ||   ||||||||||||||||||||||||    
T  11828776 taggagaaaacttaggtacaattccttacttgcttttcatatcgttcttaactaaaaatacatatttt 11828709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 158 - 225
Target Start/End: Complemental strand, 17426803 - 17426736
Alignment:
Q  158 taggagaaaacttagttacaattcctcaggtgcttttcgtacgattcttaactaaaaatacatatttt 225  Q
    ||||||||||||||| |||||||  | |||||||||||||| | |||||||||||||||  |||||||    
T  17426803 taggagaaaacttaggtacaattttttaggtgcttttcgtatggttcttaactaaaaatgtatatttt 17426736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 158 - 213
Target Start/End: Complemental strand, 38629647 - 38629592
Alignment:
Q  158 taggagaaaacttagttacaattcctcaggtgcttttcgtacgattcttaactaaa 213  Q
    ||||||||||||||| |||||||||| ||||| |||||||| | ||||||||||||    
T  38629647 taggagaaaacttaggtacaattccttaggtgtttttcgtatggttcttaactaaa 38629592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 162 - 213
Target Start/End: Complemental strand, 40891182 - 40891131
Alignment:
Q  162 agaaaacttagttacaattcctcaggtgcttttcgtacgattcttaactaaa 213  Q
    ||||||||||| |||||||||| |||||||||||||| | ||||||||||||    
T  40891182 agaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaa 40891131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 159 - 213
Target Start/End: Original strand, 17426627 - 17426681
Alignment:
Q  159 aggagaaaacttagttacaattcctcaggtgcttttcgtacgattcttaactaaa 213  Q
    |||||||||||||| |||||||| | |||||||||||||| | ||||||||||||    
T  17426627 aggagaaaacttaggtacaattcattaggtgcttttcgtatggttcttaactaaa 17426681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 159 - 213
Target Start/End: Original strand, 24741822 - 24741876
Alignment:
Q  159 aggagaaaacttagttacaattcctcaggtgcttttcgtacgattcttaactaaa 213  Q
    |||| ||||||||| |||||||||| |||||||||||||| | ||||||||||||    
T  24741822 aggaaaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaa 24741876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 159 - 225
Target Start/End: Original strand, 38520017 - 38520083
Alignment:
Q  159 aggagaaaacttagttacaattcctcaggtgcttttcgtacgattcttaactaaaaatacatatttt 225  Q
    ||||||||| |||| || ||||||| || ||||||||||| | |||||||||||||||| |||||||    
T  38520017 aggagaaaatttaggtataattccttagttgcttttcgtatggttcttaactaaaaatatatatttt 38520083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 185 - 225
Target Start/End: Original strand, 40891038 - 40891078
Alignment:
Q  185 aggtgcttttcgtacgattcttaactaaaaatacatatttt 225  Q
    ||||| |||||||||| ||||||||||||||||||||||||    
T  40891038 aggtgtttttcgtacggttcttaactaaaaatacatatttt 40891078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 158 - 225
Target Start/End: Original strand, 38629472 - 38629539
Alignment:
Q  158 taggagaaaacttagttacaattcctcaggtgcttttcgtacgattcttaactaaaaatacatatttt 225  Q
    |||||||||| |||  |||||||| | |  ||||||||||| | ||||||||||||||||||||||||    
T  38629472 taggagaaaatttaagtacaattctttaaatgcttttcgtatggttcttaactaaaaatacatatttt 38629539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 159 - 213
Target Start/End: Original strand, 23940803 - 23940857
Alignment:
Q  159 aggagaaaacttagttacaattcctcaggtgcttttcgtacgattcttaactaaa 213  Q
    |||||||||||| | ||||||| || | |||||||||||| ||||||||||||||    
T  23940803 aggagaaaacttcggtacaatttcttaagtgcttttcgtatgattcttaactaaa 23940857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 159 - 213
Target Start/End: Original strand, 24211277 - 24211331
Alignment:
Q  159 aggagaaaacttagttacaattcctcaggtgcttttcgtacgattcttaactaaa 213  Q
    |||||||||||||| |||||||| | |||||||||||||| | ||||||| ||||    
T  24211277 aggagaaaacttaggtacaattctttaggtgcttttcgtatggttcttaattaaa 24211331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 159 - 213
Target Start/End: Complemental strand, 38520190 - 38520136
Alignment:
Q  159 aggagaaaacttagttacaattcctcaggtgcttttcgtacgattcttaactaaa 213  Q
    |||||||||||||| |||||||||| | |||||||||||| | || |||||||||    
T  38520190 aggagaaaacttaggtacaattccttaagtgcttttcgtatgttttttaactaaa 38520136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 48; Significance: 1e-18; HSPs: 25)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 162 - 225
Target Start/End: Complemental strand, 24397415 - 24397352
Alignment:
Q  162 agaaaacttagttacaattcctcaggtgcttttcgtacgattcttaactaaaaatacatatttt 225  Q
    ||||||||||| |||||||||| |||||||||||||| | ||||||||||||||||||||||||    
T  24397415 agaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaaaatacatatttt 24397352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 159 - 225
Target Start/End: Original strand, 15855842 - 15855908
Alignment:
Q  159 aggagaaaacttagttacaattcctcaggtgcttttcgtacgattcttaactaaaaatacatatttt 225  Q
    |||||||||||||| |||||||||| || ||||||||||| | ||||||||||||||||||||||||    
T  15855842 aggagaaaacttaggtacaattccttagatgcttttcgtatggttcttaactaaaaatacatatttt 15855908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 159 - 225
Target Start/End: Complemental strand, 35420784 - 35420718
Alignment:
Q  159 aggagaaaacttagttacaattcctcaggtgcttttcgtacgattcttaactaaaaatacatatttt 225  Q
    |||||||||||||| |||||||||| || ||||||||||| | ||||||||||||||||||||||||    
T  35420784 aggagaaaacttaggtacaattccttagatgcttttcgtatggttcttaactaaaaatacatatttt 35420718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 158 - 225
Target Start/End: Original strand, 1138557 - 1138624
Alignment:
Q  158 taggagaaaacttagttacaattcctcaggtgcttttcgtacgattcttaactaaaaatacatatttt 225  Q
    ||||||||||||||| |||||||| |  ||||||||||||| | ||||||||||||||||||||||||    
T  1138557 taggagaaaacttaggtacaattcttttggtgcttttcgtatggttcttaactaaaaatacatatttt 1138624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 158 - 225
Target Start/End: Original strand, 16472953 - 16473020
Alignment:
Q  158 taggagaaaacttagttacaattcctcaggtgcttttcgtacgattcttaactaaaaatacatatttt 225  Q
    ||||| ||||||||| |||||||||| || ||||||||||| | ||||||||||||||||||||||||    
T  16472953 taggaaaaaacttaggtacaattccttagatgcttttcgtatggttcttaactaaaaatacatatttt 16473020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 159 - 225
Target Start/End: Original strand, 4265981 - 4266047
Alignment:
Q  159 aggagaaaacttagttacaattcctcaggtgcttttcgtacgattcttaactaaaaatacatatttt 225  Q
    |||||||||||||| ||||||| || ||||| |||||||| | ||||||||||||||||||||||||    
T  4265981 aggagaaaacttaggtacaatttcttaggtgtttttcgtatggttcttaactaaaaatacatatttt 4266047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 158 - 225
Target Start/End: Complemental strand, 21259903 - 21259836
Alignment:
Q  158 taggagaaaacttagttacaattcctcaggtgcttttcgtacgattcttaactaaaaatacatatttt 225  Q
    |||||||||| |||| |||||||||| |||| |||||| || | ||||||||||||||||||||||||    
T  21259903 taggagaaaatttaggtacaattccttaggtacttttcttatggttcttaactaaaaatacatatttt 21259836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 159 - 225
Target Start/End: Original strand, 20476430 - 20476496
Alignment:
Q  159 aggagaaaacttagttacaattcctcaggtgcttttcgtacgattcttaactaaaaatacatatttt 225  Q
    |||||||||||||| ||||||||   || ||||||||||| | ||||||||||||||||||||||||    
T  20476430 aggagaaaacttaggtacaattctctagatgcttttcgtatggttcttaactaaaaatacatatttt 20476496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 159 - 213
Target Start/End: Complemental strand, 20476603 - 20476549
Alignment:
Q  159 aggagaaaacttagttacaattcctcaggtgcttttcgtacgattcttaactaaa 213  Q
    |||||||||||||| |||||||||| |||||||||||||| | ||||||||||||    
T  20476603 aggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaa 20476549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 159 - 217
Target Start/End: Original strand, 35420611 - 35420669
Alignment:
Q  159 aggagaaaacttagttacaattcctcaggtgcttttcgtacgattcttaactaaaaata 217  Q
    |||||||||||||| |||||||||| || ||||||||||| | ||||||||||||||||    
T  35420611 aggagaaaacttaggtacaattccttagatgcttttcgtatggttcttaactaaaaata 35420669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 160 - 217
Target Start/End: Complemental strand, 15856014 - 15855957
Alignment:
Q  160 ggagaaaacttagttacaattcctcaggtgcttttcgtacgattcttaactaaaaata 217  Q
    ||||||||||||| |||||||||| || ||||||||||| | ||||||||||||||||    
T  15856014 ggagaaaacttaggtacaattccttagatgcttttcgtatggttcttaactaaaaata 15855957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 160 - 217
Target Start/End: Complemental strand, 16473126 - 16473069
Alignment:
Q  160 ggagaaaacttagttacaattcctcaggtgcttttcgtacgattcttaactaaaaata 217  Q
    ||||||||||||| |||||||||| || ||||||||||| | ||||||||||||||||    
T  16473126 ggagaaaacttaggtacaattccttagatgcttttcgtatggttcttaactaaaaata 16473069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 159 - 222
Target Start/End: Complemental strand, 33629519 - 33629456
Alignment:
Q  159 aggagaaaacttagttacaattcctcaggtgcttttcgtacgattcttaactaaaaatacatat 222  Q
    ||||||||| |||| |||||||||| || || |||||||| |||||||||||||||||| ||||    
T  33629519 aggagaaaatttaggtacaattccttagatgtttttcgtatgattcttaactaaaaatatatat 33629456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 159 - 213
Target Start/End: Original strand, 13754290 - 13754344
Alignment:
Q  159 aggagaaaacttagttacaattcctcaggtgcttttcgtacgattcttaactaaa 213  Q
    |||||||||||||| |||||||||| | ||| |||||||| ||||||||||||||    
T  13754290 aggagaaaacttaggtacaattccttatgtgtttttcgtatgattcttaactaaa 13754344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 160 - 225
Target Start/End: Complemental strand, 1164967 - 1164902
Alignment:
Q  160 ggagaaaacttagttacaattcctcaggtgcttttcgtacgattcttaactaaaaatacatatttt 225  Q
    |||||||| |||| |||||||||| || ||||||||||| | ||||||| |||||||| |||||||    
T  1164967 ggagaaaatttaggtacaattccttagctgcttttcgtatggttcttaattaaaaataaatatttt 1164902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 164 - 217
Target Start/End: Complemental strand, 8364797 - 8364744
Alignment:
Q  164 aaaacttagttacaattcctcaggtgcttttcgtacgattcttaactaaaaata 217  Q
    ||||||||| |||||||||| |||||||||| ||| | ||||||||||||||||    
T  8364797 aaaacttaggtacaattccttaggtgctttttgtatggttcttaactaaaaata 8364744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 160 - 225
Target Start/End: Complemental strand, 13754462 - 13754397
Alignment:
Q  160 ggagaaaacttagttacaattcctcaggtgcttttcgtacgattcttaactaaaaatacatatttt 225  Q
    |||||||| |||  ||||||| || ||||| |||||||| | ||||||||||||||||||||||||    
T  13754462 ggagaaaatttatgtacaattacttaggtgtttttcgtatggttcttaactaaaaatacatatttt 13754397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 158 - 225
Target Start/End: Original strand, 12807910 - 12807976
Alignment:
Q  158 taggagaaaacttagttacaattcctcaggtgcttttcgtacgattcttaactaaaaatacatatttt 225  Q
    |||||||||||||| | |||||| || ||||| |||||||| | || |||||||||||||||||||||    
T  12807910 taggagaaaacttaat-acaatttcttaggtgtttttcgtatggtttttaactaaaaatacatatttt 12807976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 159 - 213
Target Start/End: Complemental strand, 1138731 - 1138677
Alignment:
Q  159 aggagaaaacttagttacaattcctcaggtgcttttcgtacgattcttaactaaa 213  Q
    |||||||||||||| |||||||||  || ||||||||||| | ||||||||||||    
T  1138731 aggagaaaacttaggtacaattccatagctgcttttcgtatggttcttaactaaa 1138677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 159 - 213
Target Start/End: Complemental strand, 4266154 - 4266100
Alignment:
Q  159 aggagaaaacttagttacaattcctcaggtgcttttcgtacgattcttaactaaa 213  Q
    |||||||||||| | |||||||||| ||||| |||||||| | ||||||||||||    
T  4266154 aggagaaaacttcggtacaattccttaggtgtttttcgtatggttcttaactaaa 4266100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 187 - 225
Target Start/End: Original strand, 21261970 - 21262008
Alignment:
Q  187 gtgcttttcgtacgattcttaactaaaaatacatatttt 225  Q
    |||||||||||| | ||||||||||||||||||||||||    
T  21261970 gtgcttttcgtatggttcttaactaaaaatacatatttt 21262008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 159 - 213
Target Start/End: Original strand, 33629344 - 33629398
Alignment:
Q  159 aggagaaaacttagttacaattcctcaggtgcttttcgtacgattcttaactaaa 213  Q
    |||||||||||||| |||||||||| | |||||||| ||| | ||||||||||||    
T  33629344 aggagaaaacttaggtacaattccttatgtgcttttggtatggttcttaactaaa 33629398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 162 - 215
Target Start/End: Complemental strand, 2255631 - 2255578
Alignment:
Q  162 agaaaacttagttacaattcctcaggtgcttttcgtacgattcttaactaaaaa 215  Q
    ||||||||||| |||||||| | |||||||||||||  | ||||||||||||||    
T  2255631 agaaaacttaggtacaattctttaggtgcttttcgtgtggttcttaactaaaaa 2255578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 164 - 213
Target Start/End: Original strand, 32623219 - 32623268
Alignment:
Q  164 aaaacttagttacaattcctcaggtgcttttcgtacgattcttaactaaa 213  Q
    ||||||||| |||||||||| ||||| |||||||| | ||||||||||||    
T  32623219 aaaacttaggtacaattccttaggtgtttttcgtatggttcttaactaaa 32623268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 159 - 219
Target Start/End: Original strand, 18236465 - 18236525
Alignment:
Q  159 aggagaaaacttagttacaattcctcaggtgcttttcgtacgattcttaactaaaaataca 219  Q
    |||| ||||||||| ||||||| || || |||||||| || |||||||| |||||||||||    
T  18236465 aggacaaaacttaggtacaatttcttagctgcttttcctatgattcttagctaaaaataca 18236525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0122 (Bit Score: 47; Significance: 5e-18; HSPs: 2)
Name: scaffold0122
Description:

Target: scaffold0122; HSP #1
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 159 - 225
Target Start/End: Original strand, 45833 - 45899
Alignment:
Q  159 aggagaaaacttagttacaattcctcaggtgcttttcgtacgattcttaactaaaaatacatatttt 225  Q
    |||||||||||||| |||||||||| |||||||||| ||| | ||||||||||||||||||||||||    
T  45833 aggagaaaacttaggtacaattccttaggtgctttttgtatggttcttaactaaaaatacatatttt 45899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0122; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 160 - 213
Target Start/End: Complemental strand, 46005 - 45952
Alignment:
Q  160 ggagaaaacttagttacaattcctcaggtgcttttcgtacgattcttaactaaa 213  Q
    ||||||||||||| |||||||||| ||||||||||| || | ||||||||||||    
T  46005 ggagaaaacttaggtacaattccttaggtgcttttcttatggttcttaactaaa 45952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0595 (Bit Score: 44; Significance: 3e-16; HSPs: 2)
Name: scaffold0595
Description:

Target: scaffold0595; HSP #1
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 158 - 225
Target Start/End: Original strand, 5699 - 5766
Alignment:
Q  158 taggagaaaacttagttacaattcctcaggtgcttttcgtacgattcttaactaaaaatacatatttt 225  Q
    |||||||||||| || |||||||| | |||||||||||||| | ||||||||||||||||||||||||    
T  5699 taggagaaaactaaggtacaattctttaggtgcttttcgtatggttcttaactaaaaatacatatttt 5766  T

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Target: scaffold0595; HSP #2
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 159 - 213
Target Start/End: Complemental strand, 5879 - 5823
Alignment:
Q  159 aggagaaaacttagttacaatt--cctcaggtgcttttcgtacgattcttaactaaa 213  Q
    |||||||||||||| |||||||  ||| |||||||||||||| | ||||||||||||    
T  5879 aggagaaaacttaggtacaattttccttaggtgcttttcgtatggttcttaactaaa 5823  T

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Target: scaffold0107 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 2)
Name: scaffold0107
Description:

Target: scaffold0107; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 159 - 225
Target Start/End: Original strand, 51062 - 51128
Alignment:
Q  159 aggagaaaacttagttacaattcctcaggtgcttttcgtacgattcttaactaaaaatacatatttt 225  Q
    |||||||||||||| |||||||||| |||| ||||||||| | |||||||||||||||| |||||||    
T  51062 aggagaaaacttaggtacaattccttaggtccttttcgtatggttcttaactaaaaatatatatttt 51128  T

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Target: scaffold0107; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 159 - 213
Target Start/End: Complemental strand, 51235 - 51181
Alignment:
Q  159 aggagaaaacttagttacaattcctcaggtgcttttcgtacgattcttaactaaa 213  Q
    |||||||||||||| |||||||||| |||| |||||| || | ||||||||||||    
T  51235 aggagaaaacttaggtacaattccttaggtacttttcatatggttcttaactaaa 51181  T

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Target: scaffold0188 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 2)
Name: scaffold0188
Description:

Target: scaffold0188; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 158 - 222
Target Start/End: Original strand, 7084 - 7148
Alignment:
Q  158 taggagaaaacttagttacaattcctcaggtgcttttcgtacgattcttaactaaaaatacatat 222  Q
    |||||||||| |||| |||||||||| ||||| |||||||| |||||||||||||||||| ||||    
T  7084 taggagaaaatttaggtacaattccttaggtgtttttcgtatgattcttaactaaaaatatatat 7148  T

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Target: scaffold0188; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 158 - 213
Target Start/End: Complemental strand, 7259 - 7204
Alignment:
Q  158 taggagaaaacttagttacaattcctcaggtgcttttcgtacgattcttaactaaa 213  Q
    |||||||||| |||| ||| |||||| |||||||||||||| | ||||||||||||    
T  7259 taggagaaaatttaggtacgattccttaggtgcttttcgtatggttcttaactaaa 7204  T

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Target: scaffold0069 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0069
Description:

Target: scaffold0069; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 159 - 219
Target Start/End: Original strand, 26404 - 26464
Alignment:
Q  159 aggagaaaacttagttacaattcctcaggtgcttttcgtacgattcttaactaaaaataca 219  Q
    |||||||||||||| |||||||||| |||||||||||||| | || |||||||||||||||    
T  26404 aggagaaaacttaggtacaattccttaggtgcttttcgtatggttattaactaaaaataca 26464  T

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Target: scaffold0163 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0163
Description:

Target: scaffold0163; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 160 - 225
Target Start/End: Complemental strand, 2111 - 2046
Alignment:
Q  160 ggagaaaacttagttacaattcctcaggtgcttttcgtacgattcttaactaaaaatacatatttt 225  Q
    ||||||||||||| |||||||||| ||||||||||  || | ||||||||||||||||| ||||||    
T  2111 ggagaaaacttaggtacaattccttaggtgctttttatatggttcttaactaaaaatacgtatttt 2046  T

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Target: scaffold0653 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0653
Description:

Target: scaffold0653; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 159 - 225
Target Start/End: Complemental strand, 3565 - 3499
Alignment:
Q  159 aggagaaaacttagttacaattcctcaggtgcttttcgtacgattcttaactaaaaatacatatttt 225  Q
    ||||||||| |||| |||||||| | |||| ||||||||| | ||||||| ||||||||||||||||    
T  3565 aggagaaaatttaggtacaattctttaggtacttttcgtatggttcttaaataaaaatacatatttt 3499  T

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Target: scaffold0006 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 159 - 225
Target Start/End: Complemental strand, 72442 - 72377
Alignment:
Q  159 aggagaaaacttagttacaattcctcaggtgcttttcgtacgattcttaactaaaaatacatatttt 225  Q
    |||||||||||||||  |||||||| | |||||||||||| | || |||||||||||||||||||||    
T  72442 aggagaaaacttagtg-caattccttaagtgcttttcgtatggtttttaactaaaaatacatatttt 72377  T

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Target: scaffold0118 (Bit Score: 33; Significance: 0.000000001; HSPs: 2)
Name: scaffold0118
Description:

Target: scaffold0118; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 159 - 223
Target Start/End: Original strand, 14441 - 14505
Alignment:
Q  159 aggagaaaacttagttacaattcctcaggtgcttttcgtacgattcttaactaaaaatacatatt 223  Q
    |||||||||||||| ||||||| || ||||| ||||| || | | ||||||||||||||||||||    
T  14441 aggagaaaacttaggtacaatttcttaggtgtttttcctatggtacttaactaaaaatacatatt 14505  T

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Target: scaffold0118; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 161 - 213
Target Start/End: Complemental strand, 14612 - 14560
Alignment:
Q  161 gagaaaacttagttacaattcctcaggtgcttttcgtacgattcttaactaaa 213  Q
    |||||||||||| ||||||||||  |||||||||||||   ||||||||||||    
T  14612 gagaaaacttaggtacaattccttgggtgcttttcgtatcgttcttaactaaa 14560  T

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Target: scaffold0137 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0137
Description:

Target: scaffold0137; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 162 - 225
Target Start/End: Original strand, 10118 - 10181
Alignment:
Q  162 agaaaacttagttacaattcctcaggtgcttttcgtacgattcttaactaaaaatacatatttt 225  Q
    ||||||||||| || ||||||| ||||| ||| |||| | |||||||||||||||| |||||||    
T  10118 agaaaacttaggtataattccttaggtgttttgcgtatggttcttaactaaaaatatatatttt 10181  T

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Target: scaffold0086 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0086
Description:

Target: scaffold0086; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 161 - 213
Target Start/End: Complemental strand, 48296 - 48244
Alignment:
Q  161 gagaaaacttagttacaattcctcaggtgcttttcgtacgattcttaactaaa 213  Q
    |||||||||||| |||||||||| || |||||||||||   ||||||||||||    
T  48296 gagaaaacttagatacaattccttagatgcttttcgtatagttcttaactaaa 48244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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