View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF5910_low_8 (Length: 374)

Name: NF5910_low_8
Description: NF5910
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF5910_low_8
NF5910_low_8
[»] chr8 (60 HSPs)
chr8 (8-239)||(15961130-15961362)
chr8 (8-238)||(30473884-30474115)
chr8 (8-241)||(6299017-6299251)
chr8 (8-238)||(10477935-10478166)
chr8 (8-238)||(18997698-18997929)
chr8 (8-238)||(32110861-32111092)
chr8 (8-238)||(44832186-44832417)
chr8 (8-238)||(995815-996046)
chr8 (8-238)||(18175379-18175610)
chr8 (8-238)||(11725188-11725419)
chr8 (14-238)||(28582859-28583084)
chr8 (8-239)||(18841902-18842134)
chr8 (21-240)||(35122320-35122540)
chr8 (8-236)||(18568863-18569092)
chr8 (8-238)||(24408874-24409105)
chr8 (8-214)||(39257441-39257648)
chr8 (8-240)||(44836907-44837140)
chr8 (8-215)||(40026798-40027006)
chr8 (8-241)||(28274212-28274445)
chr8 (8-233)||(11142459-11142691)
chr8 (45-238)||(39997726-39997920)
chr8 (8-184)||(19240661-19240837)
chr8 (8-184)||(19313845-19314021)
chr8 (13-206)||(18210656-18210850)
chr8 (8-199)||(19412829-19413022)
chr8 (8-184)||(24004782-24004958)
chr8 (8-128)||(23353688-23353808)
chr8 (8-206)||(25875322-25875530)
chr8 (8-70)||(18481929-18481991)
chr8 (185-239)||(23353621-23353675)
chr8 (191-238)||(19241008-19241055)
chr8 (191-238)||(19314192-19314239)
chr8 (185-229)||(405363-405407)
chr8 (8-56)||(39997660-39997708)
chr8 (13-56)||(6299290-6299333)
chr8 (13-56)||(10477853-10477896)
chr8 (13-56)||(11142381-11142424)
chr8 (13-56)||(11725106-11725149)
chr8 (194-229)||(17695618-17695653)
chr8 (13-56)||(18175297-18175340)
chr8 (13-56)||(18997616-18997659)
chr8 (13-56)||(19240580-19240623)
chr8 (13-56)||(19313764-19313807)
chr8 (13-56)||(19412752-19412795)
chr8 (13-56)||(23353846-23353889)
chr8 (13-56)||(24408795-24408838)
chr8 (13-56)||(30474153-30474196)
chr8 (13-56)||(32111131-32111174)
chr8 (13-56)||(35122585-35122628)
chr8 (13-56)||(39997580-39997623)
chr8 (194-229)||(44831143-44831178)
chr8 (13-56)||(44832457-44832500)
chr8 (13-56)||(44836824-44836867)
chr8 (202-244)||(11071955-11071997)
chr8 (14-56)||(18210893-18210935)
chr8 (197-239)||(34815244-34815286)
chr8 (201-239)||(40169719-40169757)
chr8 (202-239)||(5769489-5769526)
chr8 (202-238)||(24471872-24471908)
chr8 (203-239)||(31379392-31379428)
[»] chr7 (39 HSPs)
chr7 (8-239)||(38163338-38163570)
chr7 (8-238)||(21804572-21804803)
chr7 (8-238)||(42242154-42242385)
chr7 (8-238)||(33916947-33917178)
chr7 (13-238)||(3840641-3840867)
chr7 (8-244)||(27138522-27138759)
chr7 (8-238)||(31373454-31373685)
chr7 (8-239)||(21341821-21342053)
chr7 (8-239)||(21669979-21670211)
chr7 (8-244)||(17178231-17178469)
chr7 (8-238)||(16376545-16376776)
chr7 (8-238)||(40968889-40969120)
chr7 (8-244)||(13786168-13786405)
chr7 (8-239)||(21656626-21656858)
chr7 (8-236)||(43933546-43933775)
chr7 (8-238)||(15109665-15109896)
chr7 (8-224)||(24924077-24924294)
chr7 (8-238)||(27903417-27903648)
chr7 (8-206)||(21753524-21753723)
chr7 (45-214)||(39030276-39030446)
chr7 (8-58)||(31096698-31096748)
chr7 (13-56)||(15109930-15109973)
chr7 (194-229)||(31097897-31097932)
chr7 (202-238)||(11001324-11001360)
chr7 (13-56)||(3840912-3840955)
chr7 (13-56)||(16376812-16376855)
chr7 (13-56)||(17178508-17178551)
chr7 (13-56)||(21341737-21341780)
chr7 (13-56)||(21656547-21656590)
chr7 (13-56)||(21669895-21669938)
chr7 (13-56)||(21804842-21804885)
chr7 (13-56)||(27138798-27138841)
chr7 (13-56)||(31373370-31373413)
chr7 (13-56)||(33917217-33917260)
chr7 (13-56)||(42242424-42242467)
chr7 (13-54)||(43933815-43933856)
chr7 (194-238)||(13765335-13765379)
chr7 (16-56)||(24924001-24924041)
chr7 (194-226)||(32661054-32661086)
[»] chr5 (53 HSPs)
chr5 (8-239)||(20874686-20874918)
chr5 (8-239)||(34110650-34110882)
chr5 (8-238)||(34107338-34107569)
chr5 (8-238)||(38246865-38247096)
chr5 (8-238)||(16526306-16526537)
chr5 (8-238)||(10729442-10729673)
chr5 (8-241)||(17373158-17373395)
chr5 (8-238)||(2398942-2399171)
chr5 (8-239)||(20655048-20655280)
chr5 (8-231)||(1395987-1396211)
chr5 (8-244)||(33375760-33375999)
chr5 (8-203)||(33570342-33570538)
chr5 (8-238)||(5479194-5479425)
chr5 (8-229)||(25099245-25099467)
chr5 (8-229)||(25158335-25158557)
chr5 (8-184)||(14141162-14141338)
chr5 (8-199)||(27647928-27648120)
chr5 (8-220)||(24223182-24223395)
chr5 (89-244)||(40177120-40177276)
chr5 (8-202)||(29275622-29275817)
chr5 (8-196)||(6940545-6940734)
chr5 (8-184)||(1394541-1394717)
chr5 (13-176)||(17913744-17913907)
chr5 (238-322)||(38185057-38185137)
chr5 (238-322)||(38213220-38213300)
chr5 (238-316)||(38452031-38452105)
chr5 (185-239)||(8179752-8179806)
chr5 (174-229)||(30088711-30088767)
chr5 (13-56)||(1395907-1395950)
chr5 (13-56)||(2399210-2399253)
chr5 (13-56)||(5479115-5479158)
chr5 (13-56)||(6940768-6940811)
chr5 (13-56)||(10729712-10729755)
chr5 (13-56)||(14141377-14141420)
chr5 (13-56)||(16526577-16526620)
chr5 (13-56)||(17373434-17373477)
chr5 (13-56)||(20874604-20874647)
chr5 (13-56)||(24223434-24223477)
chr5 (240-271)||(26029304-26029335)
chr5 (13-56)||(27647845-27647888)
chr5 (194-229)||(30096285-30096320)
chr5 (13-56)||(33570578-33570621)
chr5 (13-56)||(34107608-34107651)
chr5 (13-56)||(34110566-34110609)
chr5 (317-356)||(38180468-38180507)
chr5 (317-356)||(38190624-38190663)
chr5 (317-356)||(38207692-38207731)
chr5 (317-356)||(38217849-38217888)
chr5 (13-56)||(38247135-38247178)
chr5 (317-356)||(38455828-38455867)
chr5 (13-56)||(40177033-40177076)
chr5 (201-229)||(4082591-4082619)
chr5 (201-229)||(16349724-16349752)
[»] chr3 (46 HSPs)
chr3 (8-239)||(49672560-49672792)
chr3 (8-238)||(12264198-12264429)
chr3 (8-238)||(38653927-38654158)
chr3 (8-238)||(43363611-43363842)
chr3 (8-244)||(34121353-34121590)
chr3 (8-239)||(21098302-21098534)
chr3 (8-238)||(1941720-1941951)
chr3 (8-240)||(3898420-3898653)
chr3 (8-238)||(49506349-49506580)
chr3 (8-238)||(54073025-54073259)
chr3 (8-239)||(26948796-26949028)
chr3 (8-238)||(4584434-4584665)
chr3 (8-238)||(20671247-20671478)
chr3 (8-238)||(36076454-36076685)
chr3 (8-236)||(31488409-31488638)
chr3 (8-236)||(39146438-39146667)
chr3 (8-238)||(45557884-45558115)
chr3 (8-238)||(49478206-49478437)
chr3 (55-240)||(40014651-40014837)
chr3 (8-233)||(55041588-55041820)
chr3 (8-196)||(24119205-24119394)
chr3 (85-206)||(26051334-26051457)
chr3 (133-238)||(6460168-6460273)
chr3 (8-77)||(26052240-26052309)
chr3 (194-229)||(37099729-37099764)
chr3 (13-56)||(1941990-1942033)
chr3 (13-56)||(3898338-3898381)
chr3 (13-56)||(12264115-12264158)
chr3 (13-56)||(20671166-20671209)
chr3 (13-56)||(21098219-21098262)
chr3 (13-56)||(26052349-26052392)
chr3 (13-56)||(26948689-26948732)
chr3 (13-56)||(31488329-31488372)
chr3 (13-56)||(34121271-34121314)
chr3 (13-56)||(38654198-38654241)
chr3 (13-56)||(43363881-43363924)
chr3 (13-56)||(49478124-49478167)
chr3 (13-56)||(49672478-49672521)
chr3 (198-229)||(53556920-53556951)
chr3 (13-56)||(55041858-55041901)
chr3 (185-239)||(13364021-13364075)
chr3 (197-226)||(5561565-5561594)
chr3 (202-239)||(25437286-25437323)
chr3 (13-54)||(36076723-36076764)
chr3 (191-239)||(926210-926258)
chr3 (202-238)||(20370358-20370394)
[»] chr2 (32 HSPs)
chr2 (8-239)||(41664508-41664740)
chr2 (8-244)||(41663235-41663472)
chr2 (8-238)||(6120550-6120781)
chr2 (8-238)||(18351549-18351780)
chr2 (8-239)||(44902080-44902311)
chr2 (8-238)||(19596363-19596594)
chr2 (13-238)||(20544828-20545054)
chr2 (8-238)||(8700259-8700490)
chr2 (8-236)||(31424007-31424236)
chr2 (8-239)||(42441958-42442194)
chr2 (8-241)||(42055197-42055431)
chr2 (8-236)||(26231261-26231490)
chr2 (8-238)||(36279455-36279685)
chr2 (86-238)||(27944796-27944949)
chr2 (13-238)||(34007714-34007935)
chr2 (8-207)||(999262-999462)
chr2 (23-197)||(16214837-16215012)
chr2 (85-213)||(692227-692356)
chr2 (194-239)||(25889038-25889083)
chr2 (13-56)||(19596634-19596677)
chr2 (194-229)||(31572466-31572501)
chr2 (199-239)||(2988911-2988951)
chr2 (13-56)||(6120467-6120510)
chr2 (13-56)||(16214741-16214784)
chr2 (13-56)||(18351467-18351510)
chr2 (13-56)||(26231527-26231570)
chr2 (13-56)||(31423924-31423967)
chr2 (13-56)||(34007980-34008023)
chr2 (13-56)||(41663152-41663195)
chr2 (13-56)||(42441876-42441919)
chr2 (188-238)||(22139561-22139611)
chr2 (202-238)||(17839249-17839285)
[»] chr1 (43 HSPs)
chr1 (8-239)||(4266379-4266611)
chr1 (8-239)||(38913746-38913978)
chr1 (8-238)||(34888686-34888917)
chr1 (8-246)||(2951358-2951597)
chr1 (27-241)||(1231813-1232028)
chr1 (8-214)||(50151058-50151265)
chr1 (8-238)||(9216029-9216260)
chr1 (8-238)||(23482707-23482938)
chr1 (8-246)||(38444629-38444868)
chr1 (8-233)||(35614065-35614291)
chr1 (8-239)||(18706508-18706739)
chr1 (8-238)||(7333942-7334173)
chr1 (13-238)||(52687114-52687339)
chr1 (8-238)||(18855233-18855463)
chr1 (85-238)||(31018200-31018354)
chr1 (85-236)||(50326076-50326228)
chr1 (8-198)||(39727978-39728169)
chr1 (21-184)||(35614827-35614989)
chr1 (21-184)||(19764605-19764768)
chr1 (145-239)||(29942153-29942248)
chr1 (8-144)||(2590333-2590468)
chr1 (8-148)||(19768462-19768602)
chr1 (122-205)||(5061335-5061419)
chr1 (191-238)||(52957058-52957105)
chr1 (195-238)||(2590466-2590509)
chr1 (202-238)||(26497649-26497685)
chr1 (197-229)||(28947463-28947495)
chr1 (174-229)||(29387896-29387952)
chr1 (13-56)||(1231725-1231768)
chr1 (13-56)||(2951636-2951679)
chr1 (13-56)||(4266297-4266340)
chr1 (13-56)||(18706773-18706816)
chr1 (13-56)||(19764814-19764857)
chr1 (13-56)||(19768382-19768425)
chr1 (13-56)||(23482972-23483015)
chr1 (13-56)||(35613984-35614027)
chr1 (13-56)||(35614734-35614777)
chr1 (13-56)||(38914017-38914060)
chr1 (13-56)||(52036310-52036353)
chr1 (202-238)||(4325454-4325490)
chr1 (13-53)||(7333863-7333903)
chr1 (186-234)||(36465872-36465920)
chr1 (203-239)||(41871384-41871420)
[»] scaffold0031 (1 HSPs)
scaffold0031 (8-238)||(46272-46503)
[»] chr6 (38 HSPs)
chr6 (8-238)||(12597265-12597496)
chr6 (8-236)||(19997663-19997892)
chr6 (8-239)||(33645940-33646172)
chr6 (8-240)||(28099595-28099828)
chr6 (8-238)||(2266766-2267005)
chr6 (14-240)||(13533771-13533998)
chr6 (8-238)||(17202430-17202661)
chr6 (8-238)||(3592891-3593122)
chr6 (8-238)||(10584728-10584959)
chr6 (13-239)||(15044725-15044952)
chr6 (8-239)||(2005426-2005658)
chr6 (8-172)||(17594814-17594979)
chr6 (8-136)||(8539598-8539726)
chr6 (114-238)||(1405563-1405688)
chr6 (8-137)||(25448747-25448876)
chr6 (100-202)||(33035523-33035626)
chr6 (185-239)||(8539729-8539783)
chr6 (197-238)||(162669-162710)
chr6 (185-238)||(6300709-6300762)
chr6 (185-238)||(6307519-6307572)
chr6 (194-229)||(8657073-8657108)
chr6 (196-239)||(14986390-14986433)
chr6 (198-238)||(15432337-15432377)
chr6 (188-236)||(25342639-25342687)
chr6 (13-56)||(2266684-2266727)
chr6 (188-239)||(2965458-2965509)
chr6 (13-56)||(10584996-10585039)
chr6 (13-56)||(12597535-12597578)
chr6 (13-56)||(15044639-15044682)
chr6 (13-56)||(17202348-17202391)
chr6 (13-56)||(17594733-17594776)
chr6 (13-56)||(19997580-19997623)
chr6 (194-229)||(24570763-24570798)
chr6 (13-56)||(28099868-28099911)
chr6 (194-229)||(33289079-33289114)
chr6 (13-56)||(33645858-33645901)
chr6 (197-238)||(24165091-24165132)
chr6 (202-238)||(2737142-2737178)
[»] chr4 (48 HSPs)
chr4 (8-238)||(52434622-52434853)
chr4 (8-240)||(30824920-30825153)
chr4 (8-238)||(16917888-16918119)
chr4 (8-240)||(37651664-37651897)
chr4 (8-238)||(53143262-53143493)
chr4 (8-239)||(12090458-12090691)
chr4 (8-238)||(31965969-31966200)
chr4 (14-238)||(16904952-16905177)
chr4 (8-239)||(33139470-33139702)
chr4 (8-236)||(46256032-46256261)
chr4 (8-243)||(48118529-48118762)
chr4 (8-238)||(37590804-37591035)
chr4 (8-229)||(44376088-44376310)
chr4 (14-238)||(35760585-35760810)
chr4 (8-238)||(41387124-41387355)
chr4 (8-238)||(47142800-47143031)
chr4 (8-236)||(45976992-45977221)
chr4 (8-238)||(39058357-39058588)
chr4 (8-215)||(31628510-31628718)
chr4 (8-214)||(52098214-52098422)
chr4 (8-236)||(54624955-54625177)
chr4 (8-184)||(45782484-45782660)
chr4 (13-177)||(50229768-50229933)
chr4 (197-238)||(18209699-18209740)
chr4 (145-198)||(50229712-50229766)
chr4 (85-132)||(34684603-34684650)
chr4 (197-228)||(11238181-11238212)
chr4 (13-56)||(12090730-12090773)
chr4 (13-56)||(16905218-16905261)
chr4 (13-56)||(16918158-16918201)
chr4 (196-239)||(18258212-18258255)
chr4 (194-229)||(19745243-19745278)
chr4 (194-229)||(19794528-19794563)
chr4 (196-243)||(22289950-22289997)
chr4 (194-229)||(23976715-23976750)
chr4 (199-238)||(26724134-26724173)
chr4 (13-56)||(30825192-30825235)
chr4 (13-56)||(31966239-31966282)
chr4 (13-56)||(39058622-39058665)
chr4 (13-56)||(45977264-45977307)
chr4 (13-56)||(47143070-47143113)
chr4 (13-56)||(48118802-48118845)
chr4 (13-56)||(52098460-52098503)
chr4 (13-56)||(52434540-52434583)
chr4 (13-56)||(53143534-53143577)
chr4 (13-56)||(54624879-54624922)
chr4 (202-238)||(8371080-8371116)
chr4 (13-53)||(50229979-50230019)
[»] scaffold0022 (2 HSPs)
scaffold0022 (8-240)||(149048-149281)
scaffold0022 (13-56)||(149318-149361)
[»] scaffold0173 (1 HSPs)
scaffold0173 (8-238)||(19345-19576)
[»] scaffold0836 (1 HSPs)
scaffold0836 (87-248)||(5268-5430)
[»] scaffold0515 (1 HSPs)
scaffold0515 (87-238)||(6061-6213)
[»] scaffold0306 (1 HSPs)
scaffold0306 (87-238)||(6071-6223)
[»] scaffold0896 (1 HSPs)
scaffold0896 (194-229)||(1102-1137)
[»] scaffold0316 (1 HSPs)
scaffold0316 (196-241)||(14730-14774)
[»] scaffold1234 (1 HSPs)
scaffold1234 (202-238)||(1047-1083)


Alignment Details
Target: chr8 (Bit Score: 200; Significance: 1e-109; HSPs: 60)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 200; E-Value: 1e-109
Query Start/End: Original strand, 8 - 239
Target Start/End: Original strand, 15961130 - 15961362
Alignment:
Q  8 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgag 107  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||       |||||||||||||||||||||||    
T  15961130 ccaataatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgag 15961229  T
Q  108 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgt-tactatatctacaatgtatatg 206  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  15961230 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatg 15961329  T
Q  207 acccgtgcggcagcacgggtggaaagtctagta 239  Q
    |||||||||||||||||||||||||||||||||    
T  15961330 acccgtgcggcagcacgggtggaaagtctagta 15961362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 199; E-Value: 1e-108
Query Start/End: Original strand, 8 - 238
Target Start/End: Complemental strand, 30474115 - 30473884
Alignment:
Q  8 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgag 107  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||       |||||||||||||||||||||||    
T  30474115 ccaataatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgag 30474016  T
Q  108 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgt-tactatatctacaatgtatatg 206  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  30474015 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatg 30473916  T
Q  207 acccgtgcggcagcacgggtggaaagtctagt 238  Q
    ||||||||||||||||||||||||||||||||    
T  30473915 acccgtgcggcagcacgggtggaaagtctagt 30473884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 198; E-Value: 1e-108
Query Start/End: Original strand, 8 - 241
Target Start/End: Complemental strand, 6299251 - 6299017
Alignment:
Q  8 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgag 107  Q
    |||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||       |||||||||||||||||||||||    
T  6299251 ccaataatataatattgacatataattttaacaaaggaatgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgag 6299152  T
Q  108 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgt-tactatatctacaatgtatatg 206  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  6299151 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatg 6299052  T
Q  207 acccgtgcggcagcacgggtggaaagtctagtaaa 241  Q
    |||||||||||||||||||||||||||||||||||    
T  6299051 acccgtgcggcagcacgggtggaaagtctagtaaa 6299017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 8 - 238
Target Start/End: Original strand, 10477935 - 10478166
Alignment:
Q  8 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgag 107  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||       |||||||||||||||||||||||    
T  10477935 ccaataatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgag 10478034  T
Q  108 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgt-tactatatctacaatgtatatg 206  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  10478035 gttcgaattccaacatctgcatatatttgtgaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatg 10478134  T
Q  207 acccgtgcggcagcacgggtggaaagtctagt 238  Q
    ||||||||||||||||||||||||||||||||    
T  10478135 acccgtgcggcagcacgggtggaaagtctagt 10478166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 8 - 238
Target Start/End: Original strand, 18997698 - 18997929
Alignment:
Q  8 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgag 107  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||       |||||||||||||||||||||||    
T  18997698 ccaataatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgag 18997797  T
Q  108 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgt-tactatatctacaatgtatatg 206  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  18997798 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatg 18997897  T
Q  207 acccgtgcggcagcacgggtggaaagtctagt 238  Q
    ||||||||||||||||||||||| ||||||||    
T  18997898 acccgtgcggcagcacgggtggatagtctagt 18997929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 8 - 238
Target Start/End: Complemental strand, 32111092 - 32110861
Alignment:
Q  8 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgag 107  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||       |||||||||||||||||||||||    
T  32111092 ccaataatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgag 32110993  T
Q  108 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgt-tactatatctacaatgtatatg 206  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  32110992 gttcgaattccaacatctgcatatatttggaaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatg 32110893  T
Q  207 acccgtgcggcagcacgggtggaaagtctagt 238  Q
    ||||||||||||||||||||||||||||||||    
T  32110892 acccgtgcggcagcacgggtggaaagtctagt 32110861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 8 - 238
Target Start/End: Complemental strand, 44832417 - 44832186
Alignment:
Q  8 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgag 107  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||       |||||||||||||||||||||||    
T  44832417 ccaataatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgag 44832318  T
Q  108 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgt-tactatatctacaatgtatatg 206  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  44832317 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatg 44832218  T
Q  207 acccgtgcggcagcacgggtggaaagtctagt 238  Q
    |||||||||||| |||||||||||||||||||    
T  44832217 acccgtgcggcaacacgggtggaaagtctagt 44832186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 191; E-Value: 1e-103
Query Start/End: Original strand, 8 - 238
Target Start/End: Complemental strand, 996046 - 995815
Alignment:
Q  8 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgag 107  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||       |||||||||||||||||||||||    
T  996046 ccaataatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaagttaatatttttttggtgaataagcgtggtgtctgag 995947  T
Q  108 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgt-tactatatctacaatgtatatg 206  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  995946 gttcgaattccaacatatgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatg 995847  T
Q  207 acccgtgcggcagcacgggtggaaagtctagt 238  Q
    ||||||||||||||||||||||||||||||||    
T  995846 acccgtgcggcagcacgggtggaaagtctagt 995815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 8 - 238
Target Start/End: Original strand, 18175379 - 18175610
Alignment:
Q  8 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgag 107  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||       |||||||||| ||||||||||||    
T  18175379 ccaataatataatattgacatataattttaacaaaagaatgaagtaacacacgtttgataataattaatatttttttggtgaataagtgtggtgtctgag 18175478  T
Q  108 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgt-tactatatctacaatgtatatg 206  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  18175479 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatg 18175578  T
Q  207 acccgtgcggcagcacgggtggaaagtctagt 238  Q
    ||||||||||||||||||||||||||||||||    
T  18175579 acccgtgcggcagcacgggtggaaagtctagt 18175610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 179; E-Value: 2e-96
Query Start/End: Original strand, 8 - 238
Target Start/End: Original strand, 11725188 - 11725419
Alignment:
Q  8 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgag 107  Q
    |||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||       |||||||||| ||||||||||||    
T  11725188 ccaataatataacattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctgag 11725287  T
Q  108 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgt-tactatatctacaatgtatatg 206  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||    
T  11725288 gttcgaattccaacatctgcatatatttgagaccacatatttcattctctttgatatgcattgagatttgtttttgtctactacatctacaatgtatatg 11725387  T
Q  207 acccgtgcggcagcacgggtggaaagtctagt 238  Q
    |||||||| |||||||||||||||||||||||    
T  11725388 acccgtgcagcagcacgggtggaaagtctagt 11725419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 169; E-Value: 1e-90
Query Start/End: Original strand, 14 - 238
Target Start/End: Original strand, 28582859 - 28583084
Alignment:
Q  14 atataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgaggttcga 113  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||       |||||||||| ||||||||||||||||||    
T  28582859 atataacattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctgaggttcga 28582958  T
Q  114 attccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgt-tactatatctacaatgtatatgacccgt 212  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||| | ||||| ||||||||||||||||||||||    
T  28582959 attccaacatctgcatatatttgagaccacatatttcattctctttgatatacattgagatttgtttttatctactacatctacaatgtatatgacccgt 28583058  T
Q  213 gcggcagcacgggtggaaagtctagt 238  Q
    ||||||||||||||||||| ||||||    
T  28583059 gcggcagcacgggtggaaaatctagt 28583084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 164; E-Value: 1e-87
Query Start/End: Original strand, 8 - 239
Target Start/End: Original strand, 18841902 - 18842134
Alignment:
Q  8 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgag 107  Q
    |||| ||||||| |||||||||||||||||||||||||||||||||||| || |||||||||||||||||       |||||||||| ||||||||||||    
T  18841902 ccaataatataacattgacatataattttaacaaaagaatgaagtaacatacaattgataaaaattaatatttttaaggtgaataagtgtggtgtctgag 18842001  T
Q  108 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgt-tactatatctacaatgtatatg 206  Q
     ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||| ||||| ||||||||||||||||    
T  18842002 attcgaattccaacatctgcatatattttggaccacatatttcattctctttgatatgcattgagatttatttttgtctactacatctacaatgtatatg 18842101  T
Q  207 acccgtgcggcagcacgggtggaaagtctagta 239  Q
    ||||||||||||| |||||||||||||||||||    
T  18842102 acccgtgcggcagaacgggtggaaagtctagta 18842134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 164; E-Value: 1e-87
Query Start/End: Original strand, 21 - 240
Target Start/End: Complemental strand, 35122540 - 35122320
Alignment:
Q  21 attgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgaggttcgaattccaa 120  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||       |||||||||| |||||||||||| ||||||||||||    
T  35122540 attgacatataattttaataaaagaatgaagtaacacacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctgagattcgaattccaa 35122441  T
Q  121 catctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgt-tactatatctacaatgtatatgacccgtgcggcag 219  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||| |||    
T  35122440 catctgcatatattttggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactacatctacaatgtatatgacccgtgcgacag 35122341  T
Q  220 cacgggtggaaagtctagtaa 240  Q
    || ||||||||||||||||||    
T  35122340 caggggtggaaagtctagtaa 35122320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 161; E-Value: 9e-86
Query Start/End: Original strand, 8 - 236
Target Start/End: Original strand, 18568863 - 18569092
Alignment:
Q  8 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgag 107  Q
    |||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||       | |||||||| ||||||| ||||    
T  18568863 ccaataatataacattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttaagatgaataagtgtggtgtttgag 18568962  T
Q  108 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgt-tactatatctacaatgtatatg 206  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||| ||| | ||||||||||||||||    
T  18568963 gttcgaattccaacatctgcatatatttgggaccacatattttattctctttgatatgcattgagatatgtttttgtctacaacatctacaatgtatatg 18569062  T
Q  207 acccgtgcggcagcacgggtggaaagtcta 236  Q
    |||||||||| |||||||||||||||||||    
T  18569063 acccgtgcggtagcacgggtggaaagtcta 18569092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 159; E-Value: 1e-84
Query Start/End: Original strand, 8 - 238
Target Start/End: Original strand, 24408874 - 24409105
Alignment:
Q  8 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgag 107  Q
    |||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||       |||||||||| ||||||| |||     
T  24408874 ccaataatataacattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttaaggtgaataagtgtggtgtatgat 24408973  T
Q  108 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgt-tactatatctacaatgtatatg 206  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||| | ||||| ||||||||||||||||    
T  24408974 gttcgaattccaacatctgcatatatttgggaccacatatttcattatctttgatatgcattaagatttgtttttatctactacatctacaatgtatatg 24409073  T
Q  207 acccgtgcggcagcacgggtggaaagtctagt 238  Q
    |||||||||||| ||||||| |||||||||||    
T  24409074 acccgtgcggcaacacgggtagaaagtctagt 24409105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 159; E-Value: 1e-84
Query Start/End: Original strand, 8 - 214
Target Start/End: Original strand, 39257441 - 39257648
Alignment:
Q  8 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgag 107  Q
    |||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||       |||||||||| ||||||||||||    
T  39257441 ccaataatataacattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctgag 39257540  T
Q  108 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgt-tactatatctacaatgtatatg 206  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||    
T  39257541 gttcaaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactacatctacaatgtatatg 39257640  T
Q  207 acccgtgc 214  Q
    ||||||||    
T  39257641 acccgtgc 39257648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 157; E-Value: 2e-83
Query Start/End: Original strand, 8 - 240
Target Start/End: Original strand, 44836907 - 44837140
Alignment:
Q  8 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgag 107  Q
    |||| ||| ||| ||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||       |||||||||||||||||||||||    
T  44836907 ccaataatttaacattgagatataattttaacaaaagaatgaagtaacacacaattgataaaaattaatatttttaaggtgaataagcgtggtgtctgag 44837006  T
Q  108 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgt-tactatatctacaatgtatatg 206  Q
    |||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||| |||||||||| ||||||| ||||| |||||||||||||||     
T  44837007 gttcgaattccaacatctgcatatatttaggaccacatattttattctctttgatatgtattgagatttatttttgtctactacatctacaatgtatata 44837106  T
Q  207 acccgtgcggcagcacgggtggaaagtctagtaa 240  Q
    |||||||||||||||||||||||||| |||||||    
T  44837107 acccgtgcggcagcacgggtggaaaggctagtaa 44837140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 156; E-Value: 8e-83
Query Start/End: Original strand, 8 - 215
Target Start/End: Original strand, 40026798 - 40027006
Alignment:
Q  8 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgag 107  Q
    |||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||       |||||||||| ||||||||||||    
T  40026798 ccaataatataacattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctgag 40026897  T
Q  108 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgt-tactatatctacaatgtatatg 206  Q
    |||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||| ||||||||||||||||    
T  40026898 gttcaaattccaacatctgcatatatttgggaccacatatttcattatctttgatatgcattgagatttgtttttgtctactacatctacaatgtatatg 40026997  T
Q  207 acccgtgcg 215  Q
    |||||||||    
T  40026998 acccgtgcg 40027006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 154; E-Value: 1e-81
Query Start/End: Original strand, 8 - 241
Target Start/End: Complemental strand, 28274445 - 28274212
Alignment:
Q  8 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgag 107  Q
    |||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||       |||||||||| ||||||| ||||    
T  28274445 ccaataatataacattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttaaggtgaataagtgtggtgtatgag 28274346  T
Q  108 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgt-tactatatctacaatgtatatg 206  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||| ||||||||||||||||    
T  28274345 gttcgaattccaacatctgcgtatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctgctacatctacaatgtatatg 28274246  T
Q  207 acccgtgcggcagcacgggtggaaagtctagtaaa 241  Q
    | |||||| || |||||| ||||||||||| ||||    
T  28274245 atccgtgc-gccgcacggatggaaagtctaataaa 28274212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 153; E-Value: 5e-81
Query Start/End: Original strand, 8 - 233
Target Start/End: Original strand, 11142459 - 11142691
Alignment:
Q  8 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaat------taatannnnnnnggtgaataagcgtggtg 101  Q
    |||| ||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||      |||||       |||||||||| ||||||    
T  11142459 ccaataatataacactgacatataattttaacaaaagaatgaagtaacacacgattgataaaaataaaaattaatatttttaaggtgaataagtgtggtg 11142558  T
Q  102 tctgaggttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgt-tactatatctacaatg 200  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||    
T  11142559 tctgaggttcgaattccaacatctgcatatatttgggagcacatatttcattctctttgatatgcattgagatttgtttttgtctactacatctacaatg 11142658  T
Q  201 tatatgacccgtgcggcagcacgggtggaaagt 233  Q
    ||||||| |||||||||||||||||||||||||    
T  11142659 tatatgatccgtgcggcagcacgggtggaaagt 11142691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 146; E-Value: 8e-77
Query Start/End: Original strand, 45 - 238
Target Start/End: Original strand, 39997726 - 39997920
Alignment:
Q  45 aatgaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgaggttcgaattccaacatctgcatatatttgggaccaca 144  Q
    |||||||||||||||||||||||||||||||||       |||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||    
T  39997726 aatgaagtaacacacgattgataaaaattaatattttaaaggtgaataagtgtggtgtctgaggttcgaattccaacatctgcatatatttggaaccaca 39997825  T
Q  145 tatttcattctctttgatatgcattgagatttgtttttgt-tactatatctacaatgtatatgacccgtgcggcagcacgggtggaaagtctagt 238  Q
    |||||||||||||||||||| ||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||| ||||||    
T  39997826 tatttcattctctttgatatacattgagatttgtttttgtctactacatctacaatgtatatgacccgtgcggcagcacgggtggaaattctagt 39997920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 136; E-Value: 7e-71
Query Start/End: Original strand, 8 - 184
Target Start/End: Original strand, 19240661 - 19240837
Alignment:
Q  8 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgag 107  Q
    |||| ||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||        ||||||||| ||||||||||||    
T  19240661 ccaataatataacattgacatataattttaacaaaagaatgaagtaacacaccattgataaaaattaatatttttaacgtgaataagtgtggtgtctgag 19240760  T
Q  108 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgt 184  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19240761 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgt 19240837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 136; E-Value: 7e-71
Query Start/End: Original strand, 8 - 184
Target Start/End: Original strand, 19313845 - 19314021
Alignment:
Q  8 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgag 107  Q
    |||| ||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||        ||||||||| ||||||||||||    
T  19313845 ccaataatataacattgacatataattttaacaaaagaatgaagtaacacaccattgataaaaattaatatttttaacgtgaataagtgtggtgtctgag 19313944  T
Q  108 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgt 184  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19313945 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgt 19314021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 13 - 206
Target Start/End: Complemental strand, 18210850 - 18210656
Alignment:
Q  13 aatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgaggttcg 112  Q
    ||||||| |||||||||||| ||||||||||||| ||| ||||||||||||||||||||||||||       |||||||||| ||||||||||||||||     
T  18210850 aatataacattgacatataactttaacaaaagaaggaaataacacacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctgaggttca 18210751  T
Q  113 aattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgt-tactatatctacaatgtatatg 206  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||    
T  18210750 aattccaacatctgcatatatttgagaccacatatttcattctctttgatatgcattgagatttatttttgtctactatatctacaatgtatatg 18210656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 133; E-Value: 4e-69
Query Start/End: Original strand, 8 - 199
Target Start/End: Original strand, 19412829 - 19413022
Alignment:
Q  8 ccaagaatataatattgacatataattttaacaaaa-gaatgaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctga 106  Q
    |||| ||||||| ||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||       |||||||||  |||||||||||    
T  19412829 ccaataatataacattgacatataattttaacaaaaagaatgaagtaacacacgatggataaaaattaatatttttaaggtgaataactgtggtgtctga 19412928  T
Q  107 ggttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgt-tactatatctacaat 199  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||    
T  19412929 ggttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactacatctacaat 19413022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 8 - 184
Target Start/End: Complemental strand, 24004958 - 24004782
Alignment:
Q  8 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgag 107  Q
    |||| ||||||| |||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||       |||||||||| ||||||||||||    
T  24004958 ccaataatataacattgacatataattttaacaaaagaatgaagtaagacatgattgataaaaattaatatttttaaggtgaataagtgtggtgtctgag 24004859  T
Q  108 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgt 184  Q
    ||||||||| |||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||| ||||||    
T  24004858 gttcgaatttcaacatctgcatatatttgggaccacatgttttattctctttgatatgcattgagatttgattttgt 24004782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 8 - 128
Target Start/End: Complemental strand, 23353808 - 23353688
Alignment:
Q  8 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgag 107  Q
    |||| ||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||       |||||||||| | ||||||||||    
T  23353808 ccaataatataacattgacatataattttaacaaaagaatgaagtaacacaccattgataaaaattaatatttttaaggtgaataagtggggtgtctgag 23353709  T
Q  108 gttcgaattccaacatctgca 128  Q
    |||||||||||||||||||||    
T  23353708 gttcgaattccaacatctgca 23353688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 8 - 206
Target Start/End: Complemental strand, 25875530 - 25875322
Alignment:
Q  8 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgt---------- 97  Q
    |||| ||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||       |||||||||| ||              
T  25875530 ccaataatataacattgacatataattttaacaaaagaatgaagtaagacacgattgataaaaattaatatttttaaggtgaataagtgttttattctct 25875431  T
Q  98 ----ggtgtctgaggttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgt-tactatat 192  Q
          |||||||||||||||||||| ||||||||||     |||| ||||| ||| ||||||||| |||||||||||||||||||||||| ||||||||    
T  25875430 ttaatatgtctgaggttcgaattccagcatctgcata-----gggagcacatgttttattctctttaatatgcattgagatttgtttttgtctactatat 25875336  T
Q  193 ctacaatgtatatg 206  Q
    |||| |||||||||    
T  25875335 ctacgatgtatatg 25875322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 8 - 70
Target Start/End: Complemental strand, 18481991 - 18481929
Alignment:
Q  8 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaa 70  Q
    |||| ||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||    
T  18481991 ccaataatataacattgacatataattttaacaaaagaatgaagtaagacacgattgataaaa 18481929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 185 - 239
Target Start/End: Complemental strand, 23353675 - 23353621
Alignment:
Q  185 tactatatctacaatgtatatgacccgtgcggcagcacgggtggaaagtctagta 239  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  23353675 tactacatctacaatgtatatgacccgtgcggcagcacgggtggaaagtctagta 23353621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 191 - 238
Target Start/End: Original strand, 19241008 - 19241055
Alignment:
Q  191 atctacaatgtatatgacccgtgcggcagcacgggtggaaagtctagt 238  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||    
T  19241008 atctacaatgtatatgacccgtgcggcagcgcgggtggaaagtctagt 19241055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 191 - 238
Target Start/End: Original strand, 19314192 - 19314239
Alignment:
Q  191 atctacaatgtatatgacccgtgcggcagcacgggtggaaagtctagt 238  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||    
T  19314192 atctacaatgtatatgacccgtgcggcagcgcgggtggaaagtctagt 19314239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 185 - 229
Target Start/End: Complemental strand, 405407 - 405363
Alignment:
Q  185 tactatatctacaatgtatatgacccgtgcggcagcacgggtgga 229  Q
    |||||||  ||||||||||||||||||||||||||||||||||||    
T  405407 tactatacttacaatgtatatgacccgtgcggcagcacgggtgga 405363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 8 - 56
Target Start/End: Original strand, 39997660 - 39997708
Alignment:
Q  8 ccaagaatataatattgacatataattttaacaaaagaatgaagtaaca 56  Q
    |||| ||||||| |||||||||||||||| |||||||||||||||||||    
T  39997660 ccaataatataacattgacatataatttttacaaaagaatgaagtaaca 39997708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 13 - 56
Target Start/End: Complemental strand, 6299333 - 6299290
Alignment:
Q  13 aatataatattgacatataattttaacaaaagaatgaagtaaca 56  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  6299333 aatataacattaacatataatttttacaaaagaatgaagtaaca 6299290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 13 - 56
Target Start/End: Original strand, 10477853 - 10477896
Alignment:
Q  13 aatataatattgacatataattttaacaaaagaatgaagtaaca 56  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  10477853 aatataacattaacatataatttttacaaaagaatgaagtaaca 10477896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 13 - 56
Target Start/End: Original strand, 11142381 - 11142424
Alignment:
Q  13 aatataatattgacatataattttaacaaaagaatgaagtaaca 56  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  11142381 aatataacattaacatataatttttacaaaagaatgaagtaaca 11142424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 13 - 56
Target Start/End: Original strand, 11725106 - 11725149
Alignment:
Q  13 aatataatattgacatataattttaacaaaagaatgaagtaaca 56  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  11725106 aatataacattaacatataatttttacaaaagaatgaagtaaca 11725149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 194 - 229
Target Start/End: Original strand, 17695618 - 17695653
Alignment:
Q  194 tacaatgtatatgacccgtgcggcagcacgggtgga 229  Q
    |||||||||||| |||||||||||||||||||||||    
T  17695618 tacaatgtatattacccgtgcggcagcacgggtgga 17695653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 13 - 56
Target Start/End: Original strand, 18175297 - 18175340
Alignment:
Q  13 aatataatattgacatataattttaacaaaagaatgaagtaaca 56  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  18175297 aatataacattaacatataatttttacaaaagaatgaagtaaca 18175340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 13 - 56
Target Start/End: Original strand, 18997616 - 18997659
Alignment:
Q  13 aatataatattgacatataattttaacaaaagaatgaagtaaca 56  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  18997616 aatataacattaacatataatttttacaaaagaatgaagtaaca 18997659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 13 - 56
Target Start/End: Original strand, 19240580 - 19240623
Alignment:
Q  13 aatataatattgacatataattttaacaaaagaatgaagtaaca 56  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  19240580 aatataacattaacatataatttttacaaaagaatgaagtaaca 19240623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 13 - 56
Target Start/End: Original strand, 19313764 - 19313807
Alignment:
Q  13 aatataatattgacatataattttaacaaaagaatgaagtaaca 56  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  19313764 aatataacattaacatataatttttacaaaagaatgaagtaaca 19313807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 13 - 56
Target Start/End: Original strand, 19412752 - 19412795
Alignment:
Q  13 aatataatattgacatataattttaacaaaagaatgaagtaaca 56  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  19412752 aatataacattaacatataatttttacaaaagaatgaagtaaca 19412795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 13 - 56
Target Start/End: Complemental strand, 23353889 - 23353846
Alignment:
Q  13 aatataatattgacatataattttaacaaaagaatgaagtaaca 56  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  23353889 aatataacattaacatataatttttacaaaagaatgaagtaaca 23353846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 13 - 56
Target Start/End: Original strand, 24408795 - 24408838
Alignment:
Q  13 aatataatattgacatataattttaacaaaagaatgaagtaaca 56  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  24408795 aatataacattaacatataatttttacaaaagaatgaagtaaca 24408838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 13 - 56
Target Start/End: Complemental strand, 30474196 - 30474153
Alignment:
Q  13 aatataatattgacatataattttaacaaaagaatgaagtaaca 56  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  30474196 aatataacattaacatataatttttacaaaagaatgaagtaaca 30474153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 13 - 56
Target Start/End: Complemental strand, 32111174 - 32111131
Alignment:
Q  13 aatataatattgacatataattttaacaaaagaatgaagtaaca 56  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  32111174 aatataacattaacatataatttttacaaaagaatgaagtaaca 32111131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 13 - 56
Target Start/End: Complemental strand, 35122628 - 35122585
Alignment:
Q  13 aatataatattgacatataattttaacaaaagaatgaagtaaca 56  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  35122628 aatataacattaacatataatttttacaaaagaatgaagtaaca 35122585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 13 - 56
Target Start/End: Original strand, 39997580 - 39997623
Alignment:
Q  13 aatataatattgacatataattttaacaaaagaatgaagtaaca 56  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  39997580 aatataacattaacatataatttttacaaaagaatgaagtaaca 39997623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 194 - 229
Target Start/End: Complemental strand, 44831178 - 44831143
Alignment:
Q  194 tacaatgtatatgacccgtgcggcagcacgggtgga 229  Q
    |||||||||||||||||| |||||||||||||||||    
T  44831178 tacaatgtatatgacccgagcggcagcacgggtgga 44831143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 13 - 56
Target Start/End: Complemental strand, 44832500 - 44832457
Alignment:
Q  13 aatataatattgacatataattttaacaaaagaatgaagtaaca 56  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  44832500 aatataacattaacatataatttttacaaaagaatgaagtaaca 44832457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 13 - 56
Target Start/End: Original strand, 44836824 - 44836867
Alignment:
Q  13 aatataatattgacatataattttaacaaaagaatgaagtaaca 56  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  44836824 aatataacattaacatataatttttacaaaagaatgaagtaaca 44836867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 202 - 244
Target Start/End: Complemental strand, 11071997 - 11071955
Alignment:
Q  202 atatgacccgtgcggcagcacgggtggaaagtctagtaaatat 244  Q
    |||||||||||||||||||||||||| || |||||||| ||||    
T  11071997 atatgacccgtgcggcagcacgggtgcaaggtctagtatatat 11071955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 14 - 56
Target Start/End: Complemental strand, 18210935 - 18210893
Alignment:
Q  14 atataatattgacatataattttaacaaaagaatgaagtaaca 56  Q
    |||||| ||| |||||||||||| |||||||||||||||||||    
T  18210935 atataacattaacatataatttttacaaaagaatgaagtaaca 18210893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 197 - 239
Target Start/End: Original strand, 34815244 - 34815286
Alignment:
Q  197 aatgtatatgacccgtgcggcagcacgggtggaaagtctagta 239  Q
    ||||||||||||||||||| |||||||||||  ||||||||||    
T  34815244 aatgtatatgacccgtgcgtcagcacgggtgataagtctagta 34815286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 201 - 239
Target Start/End: Complemental strand, 40169757 - 40169719
Alignment:
Q  201 tatatgacccgtgcggcagcacgggtggaaagtctagta 239  Q
    |||||||||||||||| ||||||||||||||| ||||||    
T  40169757 tatatgacccgtgcggtagcacgggtggaaagactagta 40169719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 202 - 239
Target Start/End: Complemental strand, 5769526 - 5769489
Alignment:
Q  202 atatgacccgtgcggcagcacgggtggaaagtctagta 239  Q
    |||||||||||||||||||||||||| || ||||||||    
T  5769526 atatgacccgtgcggcagcacgggtgcaaggtctagta 5769489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 202 - 238
Target Start/End: Original strand, 24471872 - 24471908
Alignment:
Q  202 atatgacccgtgcggcagcacgggtggaaagtctagt 238  Q
    |||||||||||||||||||||||||| || |||||||    
T  24471872 atatgacccgtgcggcagcacgggtgcaaggtctagt 24471908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 203 - 239
Target Start/End: Original strand, 31379392 - 31379428
Alignment:
Q  203 tatgacccgtgcggcagcacgggtggaaagtctagta 239  Q
    ||||||||||||||||||||||||| || ||||||||    
T  31379392 tatgacccgtgcggcagcacgggtgcaaggtctagta 31379428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 200; Significance: 1e-109; HSPs: 39)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 200; E-Value: 1e-109
Query Start/End: Original strand, 8 - 239
Target Start/End: Complemental strand, 38163570 - 38163338
Alignment:
Q  8 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgag 107  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||       |||||||||||||||||||||||    
T  38163570 ccaataatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgag 38163471  T
Q  108 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgt-tactatatctacaatgtatatg 206  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  38163470 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatg 38163371  T
Q  207 acccgtgcggcagcacgggtggaaagtctagta 239  Q
    |||||||||||||||||||||||||||||||||    
T  38163370 acccgtgcggcagcacgggtggaaagtctagta 38163338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 199; E-Value: 1e-108
Query Start/End: Original strand, 8 - 238
Target Start/End: Complemental strand, 21804803 - 21804572
Alignment:
Q  8 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgag 107  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||       |||||||||||||||||||||||    
T  21804803 ccaataatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgag 21804704  T
Q  108 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgt-tactatatctacaatgtatatg 206  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  21804703 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatg 21804604  T
Q  207 acccgtgcggcagcacgggtggaaagtctagt 238  Q
    ||||||||||||||||||||||||||||||||    
T  21804603 acccgtgcggcagcacgggtggaaagtctagt 21804572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 199; E-Value: 1e-108
Query Start/End: Original strand, 8 - 238
Target Start/End: Complemental strand, 42242385 - 42242154
Alignment:
Q  8 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgag 107  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||       |||||||||||||||||||||||    
T  42242385 ccaataatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgag 42242286  T
Q  108 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgt-tactatatctacaatgtatatg 206  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  42242285 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatg 42242186  T
Q  207 acccgtgcggcagcacgggtggaaagtctagt 238  Q
    ||||||||||||||||||||||||||||||||    
T  42242185 acccgtgcggcagcacgggtggaaagtctagt 42242154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 8 - 238
Target Start/End: Complemental strand, 33917178 - 33916947
Alignment:
Q  8 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgag 107  Q
    |||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||       |||||||||||||||||||||||    
T  33917178 ccaataatataatattgacatataattttaacaaaagaatgaaataacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgag 33917079  T
Q  108 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgt-tactatatctacaatgtatatg 206  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  33917078 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatg 33916979  T
Q  207 acccgtgcggcagcacgggtggaaagtctagt 238  Q
    ||||||||||||||||||||||||||||||||    
T  33916978 acccgtgcggcagcacgggtggaaagtctagt 33916947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 13 - 238
Target Start/End: Complemental strand, 3840867 - 3840641
Alignment:
Q  13 aatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgaggttcg 112  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||||    
T  3840867 aatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgaggttcg 3840768  T
Q  113 aattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgt-tactatatctacaatgtatatgacccg 211  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||    
T  3840767 aattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatgactcg 3840668  T
Q  212 tgcggcagcacgggtggaaagtctagt 238  Q
    |||||||||||||||||||||||||||    
T  3840667 tgcggcagcacgggtggaaagtctagt 3840641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 193; E-Value: 1e-105
Query Start/End: Original strand, 8 - 244
Target Start/End: Complemental strand, 27138759 - 27138522
Alignment:
Q  8 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgag 107  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||       |||||||||||||||||||||||    
T  27138759 ccaataatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgag 27138660  T
Q  108 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgt-tactatatctacaatgtatatg 206  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||    
T  27138659 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctagaatgtatatg 27138560  T
Q  207 acccgtgcggcagcacgggtggaaagtctagtaaatat 244  Q
    ||| ||||||||||||||||||||||||||||| ||||    
T  27138559 acctgtgcggcagcacgggtggaaagtctagtatatat 27138522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 8 - 238
Target Start/End: Original strand, 31373454 - 31373685
Alignment:
Q  8 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgag 107  Q
    |||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||       |||||||||||||||||||||||    
T  31373454 ccaataatataatattgacatataattttaacaaaagaatgaagtaatacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgag 31373553  T
Q  108 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgt-tactatatctacaatgtatatg 206  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||    
T  31373554 gttcgaatttcaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctattatatctacaatgtatatg 31373653  T
Q  207 acccgtgcggcagcacgggtggaaagtctagt 238  Q
    ||||||||||||||||||||||||||||||||    
T  31373654 acccgtgcggcagcacgggtggaaagtctagt 31373685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 184; E-Value: 2e-99
Query Start/End: Original strand, 8 - 239
Target Start/End: Original strand, 21341821 - 21342053
Alignment:
Q  8 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgag 107  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||       |||||||||||||||||||||||    
T  21341821 ccaataatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgag 21341920  T
Q  108 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgt-tactatatctacaatgtatatg 206  Q
    ||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||| ||||||| || |||||||||||||||||||    
T  21341921 gttcgaattccaacatctgcatatatttgagactacatatttcattctctttgatatgcattgagatttatttttgtctattatatctacaatgtatatg 21342020  T
Q  207 acccgtgcggcagcacgggtggaaagtctagta 239  Q
    |||||||||||||||||||||||||||||||||    
T  21342021 acccgtgcggcagcacgggtggaaagtctagta 21342053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 180; E-Value: 4e-97
Query Start/End: Original strand, 8 - 239
Target Start/End: Original strand, 21669979 - 21670211
Alignment:
Q  8 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgag 107  Q
    |||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||       |||||||||| ||||||||||||    
T  21669979 ccaataatataacattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctgag 21670078  T
Q  108 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgt-tactatatctacaatgtatatg 206  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||    
T  21670079 gttcgaattccaacatctgcatatatttgggaccacatattttattctctttgatatgcattgagatttgtttttgtctactacatctacaatgtatatg 21670178  T
Q  207 acccgtgcggcagcacgggtggaaagtctagta 239  Q
    ||| |||||||||||||||||||||||||||||    
T  21670179 acctgtgcggcagcacgggtggaaagtctagta 21670211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 178; E-Value: 6e-96
Query Start/End: Original strand, 8 - 244
Target Start/End: Complemental strand, 17178469 - 17178231
Alignment:
Q  8 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatannnnnnn-ggtgaataagcgtggtgtctga 106  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||        |||||||||| |||||||||||    
T  17178469 ccaataatataatattgacatataattttaacaaaagaatgaagtaacacccgattgataaaaattaatattttttttggtgaataagtgtggtgtctga 17178370  T
Q  107 ggttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgt-tactatatctacaatgtatat 205  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||    
T  17178369 ggttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgaattgagatttgtttttgtctactatatctacaatgtatat 17178270  T
Q  206 gacccgtgcggcagcacgggtggaaagtctagtaaatat 244  Q
    ||||| |||||||||||||||||||||||||||| ||||    
T  17178269 gacccatgcggcagcacgggtggaaagtctagtatatat 17178231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 175; E-Value: 4e-94
Query Start/End: Original strand, 8 - 238
Target Start/End: Complemental strand, 16376776 - 16376545
Alignment:
Q  8 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgag 107  Q
    |||| ||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||       |||||||||| ||||||||||||    
T  16376776 ccaataatataacattgacatataattttaacaaaagaatgaagtaagacacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctgag 16376677  T
Q  108 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgt-tactatatctacaatgtatatg 206  Q
    |||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||    
T  16376676 gttcgaattccaacatctgcatatatttgggaccacatgttttattctctttgatatgcattgagatttgtttttgtctactacatctacaatgtatatg 16376577  T
Q  207 acccgtgcggcagcacgggtggaaagtctagt 238  Q
    ||||||||||||||||||||||||||||||||    
T  16376576 acccgtgcggcagcacgggtggaaagtctagt 16376545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 171; E-Value: 9e-92
Query Start/End: Original strand, 8 - 238
Target Start/End: Original strand, 40968889 - 40969120
Alignment:
Q  8 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgag 107  Q
    |||| ||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||       |||||||||| ||||||||||||    
T  40968889 ccaataatataacattgacatataattttaacaaaagaatgaagtaagacacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctgag 40968988  T
Q  108 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgt-tactatatctacaatgtatatg 206  Q
    |||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||| ||| ||||| ||||||||||||||||    
T  40968989 gttcgaattccaacatctgcatatatttgggaccacatgttttattctctttgatatgcattgagatttgtttgtgtctactacatctacaatgtatatg 40969088  T
Q  207 acccgtgcggcagcacgggtggaaagtctagt 238  Q
    ||||||||||||||||||||||||||||||||    
T  40969089 acccgtgcggcagcacgggtggaaagtctagt 40969120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 169; E-Value: 1e-90
Query Start/End: Original strand, 8 - 244
Target Start/End: Original strand, 13786168 - 13786405
Alignment:
Q  8 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgag 107  Q
    |||| ||||||| ||||||||||||||||||||||| |||||||||| || |||||||||||||||||||       |||||||||| ||||||||||||    
T  13786168 ccaataatataacattgacatataattttaacaaaaaaatgaagtaagacgcgattgataaaaattaatatttttaaggtgaataagtgtggtgtctgag 13786267  T
Q  108 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgt-tactatatctacaatgtatatg 206  Q
    |||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||    
T  13786268 gttcgaattccaacatctgcatatatttgggaccacatgttttattctctttgatatgcattgagatttgtttttgtctactacatctacaatgtatatg 13786367  T
Q  207 acccgtgcggcagcacgggtggaaagtctagtaaatat 244  Q
    ||||||||||||||||||||||||||||||||| ||||    
T  13786368 acccgtgcggcagcacgggtggaaagtctagtatatat 13786405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 168; E-Value: 6e-90
Query Start/End: Original strand, 8 - 239
Target Start/End: Original strand, 21656626 - 21656858
Alignment:
Q  8 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgag 107  Q
    |||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||       |||||||||| ||||||||||||    
T  21656626 ccaataatataacattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctgag 21656725  T
Q  108 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgt-tactatatctacaatgtatatg 206  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||  ||||||| ||||||||    
T  21656726 gttcgaattccaacatctgcatatatttgggaccacatattttattctctttgatatgcattgagatttgtttttgtctacttcatctacagtgtatatg 21656825  T
Q  207 acccgtgcggcagcacgggtggaaagtctagta 239  Q
    ||||||| || ||||||||||||||||||||||    
T  21656826 acccgtgtggtagcacgggtggaaagtctagta 21656858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 165; E-Value: 4e-88
Query Start/End: Original strand, 8 - 236
Target Start/End: Complemental strand, 43933775 - 43933546
Alignment:
Q  8 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgag 107  Q
    |||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||       |||||||||| ||||||||||||    
T  43933775 ccaataatataacattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctgag 43933676  T
Q  108 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgt-tactatatctacaatgtatatg 206  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||| ||||||| ||||| ||||||||||||||||    
T  43933675 gttcgaattccaacatctgcatatatttgggaccacatattttattctcttttatatgcattgagatttttttttgtctactacatctacaatgtatatg 43933576  T
Q  207 acccgtgcggcagcacgggtggaaagtcta 236  Q
    |||| ||||| |||||||||||||||||||    
T  43933575 acccttgcggtagcacgggtggaaagtcta 43933546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 163; E-Value: 6e-87
Query Start/End: Original strand, 8 - 238
Target Start/End: Complemental strand, 15109896 - 15109665
Alignment:
Q  8 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgag 107  Q
    |||| ||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||       | |||||||| ||||||||||||    
T  15109896 ccaataatataacattgacatataattttaacaaaagaatgaagtaacacacaattgataaaaattaatacttttaagatgaataagtgtggtgtctgag 15109797  T
Q  108 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgt-tactatatctacaatgtatatg 206  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||    
T  15109796 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactacatctacaatgtatatg 15109697  T
Q  207 acccgtgcggcagcacgggtggaaagtctagt 238  Q
     || |||||  |||||||||||||||||||||    
T  15109696 tccggtgcgatagcacgggtggaaagtctagt 15109665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 161; E-Value: 9e-86
Query Start/End: Original strand, 8 - 224
Target Start/End: Original strand, 24924077 - 24924294
Alignment:
Q  8 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgag 107  Q
    |||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||       |||||||||| ||||||||||||    
T  24924077 ccaataatataacattgacatataattttaacaaaagaatgaagtaacacacgattgataaaatttaatatttttaaggtgaataagtgtggtgtctgag 24924176  T
Q  108 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgt-tactatatctacaatgtatatg 206  Q
    |||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||    
T  24924177 gttcaaattccaacatctacatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactacatctacaatgtatatg 24924276  T
Q  207 acccgtgcggcagcacgg 224  Q
    ||||||||||||||||||    
T  24924277 acccgtgcggcagcacgg 24924294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 159; E-Value: 1e-84
Query Start/End: Original strand, 8 - 238
Target Start/End: Complemental strand, 27903648 - 27903417
Alignment:
Q  8 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgag 107  Q
    |||| ||||||| ||||||||| |||||||||||||||||||||||| ||||||||| ||||||||||||       |||||||||| ||||||| ||||    
T  27903648 ccaataatataacattgacatagaattttaacaaaagaatgaagtaagacacgattggtaaaaattaatatttttaaggtgaataagtgtggtgtatgag 27903549  T
Q  108 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgt-tactatatctacaatgtatatg 206  Q
    |||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||| ||||| ||||||||| ||||||    
T  27903548 gttcgaattccaacatctgcatatatttgggaccacatgttttattctctttgatatgcattgagatttgtttttgtctactacatctacaatatatatg 27903449  T
Q  207 acccgtgcggcagcacgggtggaaagtctagt 238  Q
    ||||||||||||||||||||||||||||||||    
T  27903448 acccgtgcggcagcacgggtggaaagtctagt 27903417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 8 - 206
Target Start/End: Complemental strand, 21753723 - 21753524
Alignment:
Q  8 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgag 107  Q
    |||| ||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||       |||||||||| ||||||||| ||    
T  21753723 ccaataatataacattgacatataattttaacaaaagaatgaagtaagacacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctaag 21753624  T
Q  108 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgt-tactatatctacaatgtatatg 206  Q
    |||||||||  |||||||||||||||||| |||||||| ||| |||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||    
T  21753623 gttcgaattttaacatctgcatatatttgagaccacatgttttattctctttgatatgcattgagatttgtttttgtctactacatctacaatgtatatg 21753524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 45 - 214
Target Start/End: Complemental strand, 39030446 - 39030276
Alignment:
Q  45 aatgaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgaggttcgaattccaacatctgcatatatttgggaccaca 144  Q
    |||||||||| ||||||||||||||||||||||       |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  39030446 aatgaagtaagacacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctgaggttcgaattccaacatctgcatatatttgggaccaca 39030347  T
Q  145 tatttcattctctttgatatgcattgagatttgtttttgt-tactatatctacaatgtatatgacccgtgc 214  Q
    | ||| ||||||||||||||||||||| |||||||||||| ||||| ||||||||| ||||||||||||||    
T  39030346 tgttttattctctttgatatgcattgaaatttgtttttgtctactacatctacaatatatatgacccgtgc 39030276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 8 - 58
Target Start/End: Original strand, 31096698 - 31096748
Alignment:
Q  8 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacaca 58  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  31096698 ccaataatataatattgacatataattttaacaaaagaatgaagtaacaca 31096748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 13 - 56
Target Start/End: Complemental strand, 15109973 - 15109930
Alignment:
Q  13 aatataatattgacatataattttaacaaaagaatgaagtaaca 56  Q
    ||||||||||| |||||||||||| |||||||||||||||||||    
T  15109973 aatataatattaacatataatttttacaaaagaatgaagtaaca 15109930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 194 - 229
Target Start/End: Original strand, 31097897 - 31097932
Alignment:
Q  194 tacaatgtatatgacccgtgcggcagcacgggtgga 229  Q
    ||||||||||||||||||||||||||||||||||||    
T  31097897 tacaatgtatatgacccgtgcggcagcacgggtgga 31097932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 202 - 238
Target Start/End: Complemental strand, 11001360 - 11001324
Alignment:
Q  202 atatgacccgtgcggcagcacgggtggaaagtctagt 238  Q
    ||||||||||||||||||||||||||||| |||||||    
T  11001360 atatgacccgtgcggcagcacgggtggaaggtctagt 11001324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 13 - 56
Target Start/End: Complemental strand, 3840955 - 3840912
Alignment:
Q  13 aatataatattgacatataattttaacaaaagaatgaagtaaca 56  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  3840955 aatataacattaacatataatttttacaaaagaatgaagtaaca 3840912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 13 - 56
Target Start/End: Complemental strand, 16376855 - 16376812
Alignment:
Q  13 aatataatattgacatataattttaacaaaagaatgaagtaaca 56  Q
    ||||||| |||||||||||||||| |||||| ||||||||||||    
T  16376855 aatataacattgacatataatttttacaaaataatgaagtaaca 16376812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 13 - 56
Target Start/End: Complemental strand, 17178551 - 17178508
Alignment:
Q  13 aatataatattgacatataattttaacaaaagaatgaagtaaca 56  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  17178551 aatataacattaacatataatttttacaaaagaatgaagtaaca 17178508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 13 - 56
Target Start/End: Original strand, 21341737 - 21341780
Alignment:
Q  13 aatataatattgacatataattttaacaaaagaatgaagtaaca 56  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  21341737 aatataacattaacatataatttttacaaaagaatgaagtaaca 21341780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 13 - 56
Target Start/End: Original strand, 21656547 - 21656590
Alignment:
Q  13 aatataatattgacatataattttaacaaaagaatgaagtaaca 56  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  21656547 aatataacattaacatataatttttacaaaagaatgaagtaaca 21656590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 13 - 56
Target Start/End: Original strand, 21669895 - 21669938
Alignment:
Q  13 aatataatattgacatataattttaacaaaagaatgaagtaaca 56  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  21669895 aatataacattaacatataatttttacaaaagaatgaagtaaca 21669938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 13 - 56
Target Start/End: Complemental strand, 21804885 - 21804842
Alignment:
Q  13 aatataatattgacatataattttaacaaaagaatgaagtaaca 56  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  21804885 aatataacattaacatataatttttacaaaagaatgaagtaaca 21804842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 13 - 56
Target Start/End: Complemental strand, 27138841 - 27138798
Alignment:
Q  13 aatataatattgacatataattttaacaaaagaatgaagtaaca 56  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  27138841 aatataacattaacatataatttttacaaaagaatgaagtaaca 27138798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 13 - 56
Target Start/End: Original strand, 31373370 - 31373413
Alignment:
Q  13 aatataatattgacatataattttaacaaaagaatgaagtaaca 56  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  31373370 aatataacattaacatataatttttacaaaagaatgaagtaaca 31373413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 13 - 56
Target Start/End: Complemental strand, 33917260 - 33917217
Alignment:
Q  13 aatataatattgacatataattttaacaaaagaatgaagtaaca 56  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  33917260 aatataacattaacatataatttttacaaaagaatgaagtaaca 33917217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 13 - 56
Target Start/End: Complemental strand, 42242467 - 42242424
Alignment:
Q  13 aatataatattgacatataattttaacaaaagaatgaagtaaca 56  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  42242467 aatataacattaacatataatttttacaaaagaatgaagtaaca 42242424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 13 - 54
Target Start/End: Complemental strand, 43933856 - 43933815
Alignment:
Q  13 aatataatattgacatataattttaacaaaagaatgaagtaa 54  Q
    ||||||| ||| |||||||||||| |||||||||||||||||    
T  43933856 aatataacattaacatataatttttacaaaagaatgaagtaa 43933815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 194 - 238
Target Start/End: Original strand, 13765335 - 13765379
Alignment:
Q  194 tacaatgtatatgacccgtgcggcagcacgggtggaaagtctagt 238  Q
    |||| |||| |||||| |||||||| |||||||||||||||||||    
T  13765335 tacagtgtacatgacctgtgcggcaacacgggtggaaagtctagt 13765379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 16 - 56
Target Start/End: Original strand, 24924001 - 24924041
Alignment:
Q  16 ataatattgacatataattttaacaaaagaatgaagtaaca 56  Q
    |||| ||| |||||||||||| |||||||||||||||||||    
T  24924001 ataacattaacatataatttttacaaaagaatgaagtaaca 24924041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 194 - 226
Target Start/End: Original strand, 32661054 - 32661086
Alignment:
Q  194 tacaatgtatatgacccgtgcggcagcacgggt 226  Q
    ||||||||||||||| |||||||||||||||||    
T  32661054 tacaatgtatatgactcgtgcggcagcacgggt 32661086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 200; Significance: 1e-109; HSPs: 53)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 200; E-Value: 1e-109
Query Start/End: Original strand, 8 - 239
Target Start/End: Original strand, 20874686 - 20874918
Alignment:
Q  8 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgag 107  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||       |||||||||||||||||||||||    
T  20874686 ccaataatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgag 20874785  T
Q  108 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgt-tactatatctacaatgtatatg 206  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  20874786 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatg 20874885  T
Q  207 acccgtgcggcagcacgggtggaaagtctagta 239  Q
    |||||||||||||||||||||||||||||||||    
T  20874886 acccgtgcggcagcacgggtggaaagtctagta 20874918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 200; E-Value: 1e-109
Query Start/End: Original strand, 8 - 239
Target Start/End: Original strand, 34110650 - 34110882
Alignment:
Q  8 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgag 107  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||       |||||||||||||||||||||||    
T  34110650 ccaataatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgag 34110749  T
Q  108 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgt-tactatatctacaatgtatatg 206  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  34110750 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatg 34110849  T
Q  207 acccgtgcggcagcacgggtggaaagtctagta 239  Q
    |||||||||||||||||||||||||||||||||    
T  34110850 acccgtgcggcagcacgggtggaaagtctagta 34110882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 199; E-Value: 1e-108
Query Start/End: Original strand, 8 - 238
Target Start/End: Complemental strand, 34107569 - 34107338
Alignment:
Q  8 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgag 107  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||       |||||||||||||||||||||||    
T  34107569 ccaataatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgag 34107470  T
Q  108 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgt-tactatatctacaatgtatatg 206  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  34107469 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatg 34107370  T
Q  207 acccgtgcggcagcacgggtggaaagtctagt 238  Q
    ||||||||||||||||||||||||||||||||    
T  34107369 acccgtgcggcagcacgggtggaaagtctagt 34107338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 199; E-Value: 1e-108
Query Start/End: Original strand, 8 - 238
Target Start/End: Complemental strand, 38247096 - 38246865
Alignment:
Q  8 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgag 107  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||       |||||||||||||||||||||||    
T  38247096 ccaataatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgag 38246997  T
Q  108 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgt-tactatatctacaatgtatatg 206  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  38246996 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatg 38246897  T
Q  207 acccgtgcggcagcacgggtggaaagtctagt 238  Q
    ||||||||||||||||||||||||||||||||    
T  38246896 acccgtgcggcagcacgggtggaaagtctagt 38246865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 8 - 238
Target Start/End: Complemental strand, 16526537 - 16526306
Alignment:
Q  8 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgag 107  Q
    |||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||       |||||||||||||||||||||||    
T  16526537 ccaataatataatattgacatataattttaacaaaagaacgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgag 16526438  T
Q  108 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgt-tactatatctacaatgtatatg 206  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  16526437 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatg 16526338  T
Q  207 acccgtgcggcagcacgggtggaaagtctagt 238  Q
    ||||||||||||||||||||||||||||||||    
T  16526337 acccgtgcggcagcacgggtggaaagtctagt 16526306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 191; E-Value: 1e-103
Query Start/End: Original strand, 8 - 238
Target Start/End: Complemental strand, 10729673 - 10729442
Alignment:
Q  8 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgag 107  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||       |||||||||||||||||||||||    
T  10729673 ccaataatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaataatatttttttggtgaataagcgtggtgtctgag 10729574  T
Q  108 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgt-tactatatctacaatgtatatg 206  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||    
T  10729573 gttcgaattccaacatctgcatatatttgggaccacatatttcattctcttggatatgcattgagatttgtttttgtctactatatctacaatgtatatg 10729474  T
Q  207 acccgtgcggcagcacgggtggaaagtctagt 238  Q
    ||||||||||||||||||||||||||||||||    
T  10729473 acccgtgcggcagcacgggtggaaagtctagt 10729442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 191; E-Value: 1e-103
Query Start/End: Original strand, 8 - 241
Target Start/End: Complemental strand, 17373395 - 17373158
Alignment:
Q  8 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgag 107  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||       |||||||||||||||||||||||    
T  17373395 ccaataatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgag 17373296  T
Q  108 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgt-tactatatctacaatg---tat 203  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||   |||    
T  17373295 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtactat 17373196  T
Q  204 atgacccgtgcggcagcacgggtggaaagtctagtaaa 241  Q
    ||||||||||||||||||||||||||||||||||||||    
T  17373195 atgacccgtgcggcagcacgggtggaaagtctagtaaa 17373158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 188; E-Value: 1e-102
Query Start/End: Original strand, 8 - 238
Target Start/End: Complemental strand, 2399171 - 2398942
Alignment:
Q  8 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgag 107  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||       |||||||||||||||||||||||    
T  2399171 ccaataatataatattgacatataattttaacaaaagaatgaagtaacac--gattgataaaaattaatatttttttggtgaataagcgtggtgtctgag 2399074  T
Q  108 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgt-tactatatctacaatgtatatg 206  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  2399073 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatg 2398974  T
Q  207 acccgtgcggcagcacgggtggaaagtctagt 238  Q
    ||||||||||||||||||||||||||||||||    
T  2398973 acccgtgcggcagcacgggtggaaagtctagt 2398942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 172; E-Value: 2e-92
Query Start/End: Original strand, 8 - 239
Target Start/End: Complemental strand, 20655280 - 20655048
Alignment:
Q  8 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgag 107  Q
    |||| ||||||| |||||||||||||||||||||||||||||||||| |||| |||||||||||||||||       |||||||||| ||||||||||||    
T  20655280 ccaataatataacattgacatataattttaacaaaagaatgaagtaagacacaattgataaaaattaatatttttaaggtgaataagtgtggtgtctgag 20655181  T
Q  108 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgt-tactatatctacaatgtatatg 206  Q
    |||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||    
T  20655180 gttcgaattccaacatctgcatatatttgggaccacatgttttattctctttgatatgcattgagatttgtttttgtctactacatctacaatgtatatg 20655081  T
Q  207 acccgtgcggcagcacgggtggaaagtctagta 239  Q
    |||||||||||||||||||||||||||||||||    
T  20655080 acccgtgcggcagcacgggtggaaagtctagta 20655048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 164; E-Value: 1e-87
Query Start/End: Original strand, 8 - 231
Target Start/End: Original strand, 1395987 - 1396211
Alignment:
Q  8 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgag 107  Q
    |||| ||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||       |||||||||| ||||||||||||    
T  1395987 ccaataatataacattgacatataattttaacaaaagaatgaagtaacacacgactgataaaaattaatatttttaaggtgaataagtgtggtgtctgag 1396086  T
Q  108 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgt-tactatatctacaatgtatatg 206  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||| |||| |||||||||||    
T  1396087 gttcgaattccaacatctgcagatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctgctacatctgcaatgtatatg 1396186  T
Q  207 acccgtgcggcagcacgggtggaaa 231  Q
    |||||||||||||||||||||||||    
T  1396187 acccgtgcggcagcacgggtggaaa 1396211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 164; E-Value: 1e-87
Query Start/End: Original strand, 8 - 244
Target Start/End: Original strand, 33375760 - 33375999
Alignment:
Q  8 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgag 107  Q
    |||| ||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||       |||||||||| ||||||||||||    
T  33375760 ccaataatataacattgacatataattttaacaaaagaatgaagtaagacacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctgag 33375859  T
Q  108 gttcgaattccaacatctgcatatatttggg--accacatatttcattctctttgatatgcattgagatttgtttttgt-tactatatctacaatgtata 204  Q
    |||||||||||||||||||||||||||||||  ||||||| ||| |||||||||||||||||||||||||||||||||| ||||| ||||||||||||||    
T  33375860 gttcgaattccaacatctgcatatatttgggacaccacatgttttattctctttgatatgcattgagatttgtttttgtctactacatctacaatgtata 33375959  T
Q  205 tgacccgtgcggcagcacgggtggaaagtctagtaaatat 244  Q
    ||||||||||||||||||||||||||||| ||||| ||||    
T  33375960 tgacccgtgcggcagcacgggtggaaagtttagtatatat 33375999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 160; E-Value: 3e-85
Query Start/End: Original strand, 8 - 203
Target Start/End: Complemental strand, 33570538 - 33570342
Alignment:
Q  8 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgag 107  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||       |||||||||||||||||||||||    
T  33570538 ccaataatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgag 33570439  T
Q  108 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgt-tactatatctacaatgtat 203  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||    
T  33570438 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttggtatgcattgagatttgtttttgtctactatatctacaatgtat 33570342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 155; E-Value: 3e-82
Query Start/End: Original strand, 8 - 238
Target Start/End: Original strand, 5479194 - 5479425
Alignment:
Q  8 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgag 107  Q
    |||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||       |||||||||| || |||||||||    
T  5479194 ccaataatataacattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttaaggtgaataagtgtagtgtctgag 5479293  T
Q  108 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgt-tactatatctacaatgtatatg 206  Q
    |||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||| ||||| ||||||||||||||||    
T  5479294 gttcgaattccaacatctacatatatttgggatcacatatttcattctctttgatatgcattgagatttatttttgtctactacatctacaatgtatatg 5479393  T
Q  207 acccgtgcggcagcacgggtggaaagtctagt 238  Q
    ||||||||| || ||| |||| ||||||||||    
T  5479394 acccgtgcgacaacacaggtgaaaagtctagt 5479425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 150; E-Value: 3e-79
Query Start/End: Original strand, 8 - 229
Target Start/End: Complemental strand, 25099467 - 25099245
Alignment:
Q  8 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgag 107  Q
    |||| ||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||       || ||||||| |||||| |||||    
T  25099467 ccaataatataacattgacatataattttaacaaaagaatgaagtaagacacgattgataaaaattaatatttttaaggcgaataagtgtggtgcctgag 25099368  T
Q  108 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgt-tactatatctacaatgtatatg 206  Q
    ||||||||||||||||||||||||||||| |||||||| ||| ||||||||||||||||||| |||||||||||||| ||||| ||||||||||||||||    
T  25099367 gttcgaattccaacatctgcatatatttgtgaccacatgttttattctctttgatatgcattcagatttgtttttgtctactacatctacaatgtatatg 25099268  T
Q  207 acccgtgcggcagcacgggtgga 229  Q
    |||||||||||||||||||||||    
T  25099267 acccgtgcggcagcacgggtgga 25099245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 150; E-Value: 3e-79
Query Start/End: Original strand, 8 - 229
Target Start/End: Complemental strand, 25158557 - 25158335
Alignment:
Q  8 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgag 107  Q
    |||| ||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||       || ||||||| |||||| |||||    
T  25158557 ccaataatataacattgacatataattttaacaaaagaatgaagtaagacacgattgataaaaattaatatttttaaggcgaataagtgtggtgcctgag 25158458  T
Q  108 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgt-tactatatctacaatgtatatg 206  Q
    ||||||||||||||||||||||||||||| |||||||| ||| ||||||||||||||||||| |||||||||||||| ||||| ||||||||||||||||    
T  25158457 gttcgaattccaacatctgcatatatttgtgaccacatgttttattctctttgatatgcattcagatttgtttttgtctactacatctacaatgtatatg 25158358  T
Q  207 acccgtgcggcagcacgggtgga 229  Q
    |||||||||||||||||||||||    
T  25158357 acccgtgcggcagcacgggtgga 25158335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 148; E-Value: 5e-78
Query Start/End: Original strand, 8 - 184
Target Start/End: Complemental strand, 14141338 - 14141162
Alignment:
Q  8 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgag 107  Q
    |||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||       |||||||||||||||||||||||    
T  14141338 ccaataatataatattggcatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgag 14141239  T
Q  108 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgt 184  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14141238 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgt 14141162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 144; E-Value: 1e-75
Query Start/End: Original strand, 8 - 199
Target Start/End: Original strand, 27647928 - 27648120
Alignment:
Q  8 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgag 107  Q
    |||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||       |||||||||| ||||||||||||    
T  27647928 ccaacaatataacattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctgag 27648027  T
Q  108 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgt-tactatatctacaat 199  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||    
T  27648028 gttcgaattccaacatctgtatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactacatctacaat 27648120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 141; E-Value: 8e-74
Query Start/End: Original strand, 8 - 220
Target Start/End: Complemental strand, 24223395 - 24223182
Alignment:
Q  8 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgag 107  Q
    |||| ||||| | ||||||||||| |||||||||||||||||||||||||||||||| |||| | |||||       |||||||||| ||||||||||||    
T  24223395 ccaataatatcacattgacatatacttttaacaaaagaatgaagtaacacacgattggtaaagagtaatatttttaaggtgaataagtgtggtgtctgag 24223296  T
Q  108 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgt-tactatatctacaatgtatatg 206  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||| |||||| |||||||||    
T  24223295 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttcatatgcattgagatttgtttttgtctactacatctacgatgtatatg 24223196  T
Q  207 acccgtgcggcagc 220  Q
    ||||||||||||||    
T  24223195 acccgtgcggcagc 24223182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 141; E-Value: 8e-74
Query Start/End: Original strand, 89 - 244
Target Start/End: Original strand, 40177120 - 40177276
Alignment:
Q  89 aataagcgtggtgtctgaggttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgt-tac 187  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||    
T  40177120 aataagcgtggtgtctgaggttcgaattccaacatctgcatatatttgggaccacatatttcattctcttttatatgcattgagatttgtttttgtctac 40177219  T
Q  188 tatatctacaatgtatatgacccgtgcggcagcacgggtggaaagtctagtaaatat 244  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  40177220 tatatctacaatgtatatgacccgtgcggcagcacgggtggaaagtctagtatatat 40177276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 135; E-Value: 3e-70
Query Start/End: Original strand, 8 - 202
Target Start/End: Original strand, 29275622 - 29275817
Alignment:
Q  8 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgag 107  Q
    |||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||       |||||||||| ||||||||||||    
T  29275622 ccaataatataacattgacatataattttaacaaaagaatgaagtaacacacgattgataaaagttaatatttttaaggtgaataagtgtggtgtctgag 29275721  T
Q  108 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgt-tactatatctacaatgta 202  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||| || || ||||||||||||    
T  29275722 gttcgaattccaacatctgcatatatttgggaccacatgtttcattctctttgatatgcattgaaatttgtttttgtctattacatctacaatgta 29275817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 133; E-Value: 4e-69
Query Start/End: Original strand, 8 - 196
Target Start/End: Complemental strand, 6940734 - 6940545
Alignment:
Q  8 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgag 107  Q
    |||| |||||||  ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||       |||||||||| ||||||| ||||    
T  6940734 ccaataatataacgttgacatataattttaacaaaagaatgaagtaacatacgattgataaaaattaatatttttcaggtgaataagtgtggtgtatgag 6940635  T
Q  108 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgt-tactatatctac 196  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||    
T  6940634 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactacatctac 6940545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 8 - 184
Target Start/End: Complemental strand, 1394717 - 1394541
Alignment:
Q  8 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgag 107  Q
    |||| ||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||       |||||| ||| ||||||| ||||    
T  1394717 ccaataatataacattgacatataaatttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttaaggtgaacaagtgtggtgtttgag 1394618  T
Q  108 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgt 184  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1394617 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgt 1394541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 13 - 176
Target Start/End: Original strand, 17913744 - 17913907
Alignment:
Q  13 aatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgaggttcg 112  Q
    ||||||| |||||||||||||||||||||||||||||||||| |||||||||||||| |||||||       |||||||||| ||||| | |||||||||    
T  17913744 aatataacattgacatataattttaacaaaagaatgaagtaagacacgattgataaagattaatatttttaaggtgaataagtgtggtatttgaggttcg 17913843  T
Q  113 aattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagattt 176  Q
    ||||||||||||| ||||||||||||||||||| ||| ||||||||||||||||||||||||||    
T  17913844 aattccaacatctacatatatttgggaccacatgttttattctctttgatatgcattgagattt 17913907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 238 - 322
Target Start/End: Original strand, 38185057 - 38185137
Alignment:
Q  238 taaatatgaatcattagttagttcaacattagtttaacatcatttaaaactatatatattgccttacgtaaatcagttaggttaa 322  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||    |||||||||||||||||||||||||| ||||    
T  38185057 taaatatgaatcattagttagttcaacattagtttaacatcatttaaaac----tatattgccttacgtaaatcagttagtttaa 38185137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 238 - 322
Target Start/End: Complemental strand, 38213300 - 38213220
Alignment:
Q  238 taaatatgaatcattagttagttcaacattagtttaacatcatttaaaactatatatattgccttacgtaaatcagttaggttaa 322  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||    ||||||||||||||||||||||||| ||||    
T  38213300 taaatatgaatcattagttagttcaacattagtttaacatcatttaaaact----atattgccttacgtaaatcagttagtttaa 38213220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 238 - 316
Target Start/End: Original strand, 38452031 - 38452105
Alignment:
Q  238 taaatatgaatcattagttagttcaacattagtttaacatcatttaaaactatatatattgccttacgtaaatcagtta 316  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||    |||||||||||||||||||||||||    
T  38452031 taaatatgaatcattagttcgttcaacattagtttaacatcatttaaaac----tatattgccttacgtaaatcagtta 38452105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 185 - 239
Target Start/End: Complemental strand, 8179806 - 8179752
Alignment:
Q  185 tactatatctacaatgtatatgacccgtgcggcagcacgggtggaaagtctagta 239  Q
    ||||| ||||||||| ||||||| |||||||||||||||||||||||||||||||    
T  8179806 tactacatctacaatatatatgatccgtgcggcagcacgggtggaaagtctagta 8179752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 174 - 229
Target Start/End: Complemental strand, 30088767 - 30088711
Alignment:
Q  174 tttgtttttgt-tactatatctacaatgtatatgacccgtgcggcagcacgggtgga 229  Q
    ||||||||||| ||| |||  ||||||||||||||||||||||||||||||| ||||    
T  30088767 tttgtttttgtctacaatacttacaatgtatatgacccgtgcggcagcacggatgga 30088711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 13 - 56
Target Start/End: Original strand, 1395907 - 1395950
Alignment:
Q  13 aatataatattgacatataattttaacaaaagaatgaagtaaca 56  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  1395907 aatataacattaacatataatttttacaaaagaatgaagtaaca 1395950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 13 - 56
Target Start/End: Complemental strand, 2399253 - 2399210
Alignment:
Q  13 aatataatattgacatataattttaacaaaagaatgaagtaaca 56  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  2399253 aatataacattaacatataatttttacaaaagaatgaagtaaca 2399210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 13 - 56
Target Start/End: Original strand, 5479115 - 5479158
Alignment:
Q  13 aatataatattgacatataattttaacaaaagaatgaagtaaca 56  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  5479115 aatataacattaacatataatttttacaaaagaatgaagtaaca 5479158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 13 - 56
Target Start/End: Complemental strand, 6940811 - 6940768
Alignment:
Q  13 aatataatattgacatataattttaacaaaagaatgaagtaaca 56  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  6940811 aatataacattaacatataatttttacaaaagaatgaagtaaca 6940768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 13 - 56
Target Start/End: Complemental strand, 10729755 - 10729712
Alignment:
Q  13 aatataatattgacatataattttaacaaaagaatgaagtaaca 56  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  10729755 aatataacattaacatataatttttacaaaagaatgaagtaaca 10729712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 13 - 56
Target Start/End: Complemental strand, 14141420 - 14141377
Alignment:
Q  13 aatataatattgacatataattttaacaaaagaatgaagtaaca 56  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  14141420 aatataacattaacatataatttttacaaaagaatgaagtaaca 14141377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 13 - 56
Target Start/End: Complemental strand, 16526620 - 16526577
Alignment:
Q  13 aatataatattgacatataattttaacaaaagaatgaagtaaca 56  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  16526620 aatataacattaacatataatttttacaaaagaatgaagtaaca 16526577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 13 - 56
Target Start/End: Complemental strand, 17373477 - 17373434
Alignment:
Q  13 aatataatattgacatataattttaacaaaagaatgaagtaaca 56  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  17373477 aatataacattaacatataatttttacaaaagaatgaagtaaca 17373434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 13 - 56
Target Start/End: Original strand, 20874604 - 20874647
Alignment:
Q  13 aatataatattgacatataattttaacaaaagaatgaagtaaca 56  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  20874604 aatataacattaacatataatttttacaaaagaatgaagtaaca 20874647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 13 - 56
Target Start/End: Complemental strand, 24223477 - 24223434
Alignment:
Q  13 aatataatattgacatataattttaacaaaagaatgaagtaaca 56  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  24223477 aatataacattaacatataatttttacaaaagaatgaagtaaca 24223434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 240 - 271
Target Start/End: Complemental strand, 26029335 - 26029304
Alignment:
Q  240 aatatgaatcattagttagttcaacattagtt 271  Q
    ||||||||||||||||||||||||||||||||    
T  26029335 aatatgaatcattagttagttcaacattagtt 26029304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 13 - 56
Target Start/End: Original strand, 27647845 - 27647888
Alignment:
Q  13 aatataatattgacatataattttaacaaaagaatgaagtaaca 56  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  27647845 aatataacattaacatataatttttacaaaagaatgaagtaaca 27647888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 194 - 229
Target Start/End: Complemental strand, 30096320 - 30096285
Alignment:
Q  194 tacaatgtatatgacccgtgcggcagcacgggtgga 229  Q
    |||||||||||||| |||||||||||||||||||||    
T  30096320 tacaatgtatatgatccgtgcggcagcacgggtgga 30096285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 13 - 56
Target Start/End: Complemental strand, 33570621 - 33570578
Alignment:
Q  13 aatataatattgacatataattttaacaaaagaatgaagtaaca 56  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  33570621 aatataacattaacatataatttttacaaaagaatgaagtaaca 33570578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 13 - 56
Target Start/End: Complemental strand, 34107651 - 34107608
Alignment:
Q  13 aatataatattgacatataattttaacaaaagaatgaagtaaca 56  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  34107651 aatataacattaacatataatttttacaaaagaatgaagtaaca 34107608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 13 - 56
Target Start/End: Original strand, 34110566 - 34110609
Alignment:
Q  13 aatataatattgacatataattttaacaaaagaatgaagtaaca 56  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  34110566 aatataacattaacatataatttttacaaaagaatgaagtaaca 34110609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 317 - 356
Target Start/End: Original strand, 38180468 - 38180507
Alignment:
Q  317 ggttaaagttctctctgattcaattcccctagtacgtatt 356  Q
    |||||||||||||||| ||| |||||||||||||||||||    
T  38180468 ggttaaagttctctctcattgaattcccctagtacgtatt 38180507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 317 - 356
Target Start/End: Complemental strand, 38190663 - 38190624
Alignment:
Q  317 ggttaaagttctctctgattcaattcccctagtacgtatt 356  Q
    |||||||||||||||| ||| |||||||||||||||||||    
T  38190663 ggttaaagttctctctcattgaattcccctagtacgtatt 38190624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 317 - 356
Target Start/End: Original strand, 38207692 - 38207731
Alignment:
Q  317 ggttaaagttctctctgattcaattcccctagtacgtatt 356  Q
    |||||||||||||||| ||| |||||||||||||||||||    
T  38207692 ggttaaagttctctctcattgaattcccctagtacgtatt 38207731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 317 - 356
Target Start/End: Complemental strand, 38217888 - 38217849
Alignment:
Q  317 ggttaaagttctctctgattcaattcccctagtacgtatt 356  Q
    |||||||||||||||| ||| |||||||||||||||||||    
T  38217888 ggttaaagttctctctcattgaattcccctagtacgtatt 38217849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 13 - 56
Target Start/End: Complemental strand, 38247178 - 38247135
Alignment:
Q  13 aatataatattgacatataattttaacaaaagaatgaagtaaca 56  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  38247178 aatataacattaacatataatttttacaaaagaatgaagtaaca 38247135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 317 - 356
Target Start/End: Original strand, 38455828 - 38455867
Alignment:
Q  317 ggttaaagttctctctgattcaattcccctagtacgtatt 356  Q
    |||||||||||||||| ||| |||||||||||||||||||    
T  38455828 ggttaaagttctctctcattgaattcccctagtacgtatt 38455867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 13 - 56
Target Start/End: Original strand, 40177033 - 40177076
Alignment:
Q  13 aatataatattgacatataattttaacaaaagaatgaagtaaca 56  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  40177033 aatataacattaacatataatttttacaaaagaatgaagtaaca 40177076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 201 - 229
Target Start/End: Original strand, 4082591 - 4082619
Alignment:
Q  201 tatatgacccgtgcggcagcacgggtgga 229  Q
    |||||||||||||||||||||||||||||    
T  4082591 tatatgacccgtgcggcagcacgggtgga 4082619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 201 - 229
Target Start/End: Complemental strand, 16349752 - 16349724
Alignment:
Q  201 tatatgacccgtgcggcagcacgggtgga 229  Q
    |||||||||||||||||||||||||||||    
T  16349752 tatatgacccgtgcggcagcacgggtgga 16349724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 200; Significance: 1e-109; HSPs: 46)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 200; E-Value: 1e-109
Query Start/End: Original strand, 8 - 239
Target Start/End: Original strand, 49672560 - 49672792
Alignment:
Q  8 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgag 107  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||       |||||||||||||||||||||||    
T  49672560 ccaataatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgag 49672659  T
Q  108 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgt-tactatatctacaatgtatatg 206  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  49672660 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatg 49672759  T
Q  207 acccgtgcggcagcacgggtggaaagtctagta 239  Q
    |||||||||||||||||||||||||||||||||    
T  49672760 acccgtgcggcagcacgggtggaaagtctagta 49672792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 199; E-Value: 1e-108
Query Start/End: Original strand, 8 - 238
Target Start/End: Original strand, 12264198 - 12264429
Alignment:
Q  8 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgag 107  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||       |||||||||||||||||||||||    
T  12264198 ccaataatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgag 12264297  T
Q  108 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgt-tactatatctacaatgtatatg 206  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  12264298 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatg 12264397  T
Q  207 acccgtgcggcagcacgggtggaaagtctagt 238  Q
    ||||||||||||||||||||||||||||||||    
T  12264398 acccgtgcggcagcacgggtggaaagtctagt 12264429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 199; E-Value: 1e-108
Query Start/End: Original strand, 8 - 238
Target Start/End: Complemental strand, 38654158 - 38653927
Alignment:
Q  8 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgag 107  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||       |||||||||||||||||||||||    
T  38654158 ccaataatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgag 38654059  T
Q  108 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgt-tactatatctacaatgtatatg 206  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  38654058 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatg 38653959  T
Q  207 acccgtgcggcagcacgggtggaaagtctagt 238  Q
    ||||||||||||||||||||||||||||||||    
T  38653958 acccgtgcggcagcacgggtggaaagtctagt 38653927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 199; E-Value: 1e-108
Query Start/End: Original strand, 8 - 238
Target Start/End: Complemental strand, 43363842 - 43363611
Alignment:
Q  8 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgag 107  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||       |||||||||||||||||||||||    
T  43363842 ccaataatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgag 43363743  T
Q  108 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgt-tactatatctacaatgtatatg 206  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  43363742 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatg 43363643  T
Q  207 acccgtgcggcagcacgggtggaaagtctagt 238  Q
    ||||||||||||||||||||||||||||||||    
T  43363642 acccgtgcggcagcacgggtggaaagtctagt 43363611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 8 - 244
Target Start/End: Original strand, 34121353 - 34121590
Alignment:
Q  8 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgag 107  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||       |||||||||||||||||||||||    
T  34121353 ccaataatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgag 34121452  T
Q  108 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgt-tactatatctacaatgtatatg 206  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  34121453 gttcgaattccaacatctgcatatatttgggaccacgtatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatg 34121552  T
Q  207 acccgtgcggcagcacgggtggaaagtctagtaaatat 244  Q
    ||||||||||||||||||||||||||||||||| ||||    
T  34121553 acccgtgcggcagcacgggtggaaagtctagtacatat 34121590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 196; E-Value: 1e-106
Query Start/End: Original strand, 8 - 239
Target Start/End: Original strand, 21098302 - 21098534
Alignment:
Q  8 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgag 107  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||       |||||||||||||||||||||||    
T  21098302 ccaataatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgag 21098401  T
Q  108 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgt-tactatatctacaatgtatatg 206  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||    
T  21098402 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctattatatctacaatgtatatg 21098501  T
Q  207 acccgtgcggcagcacgggtggaaagtctagta 239  Q
    |||||||||||||||||||||||||||||||||    
T  21098502 acccgtgcggcagcacgggtggaaagtctagta 21098534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 8 - 238
Target Start/End: Complemental strand, 1941951 - 1941720
Alignment:
Q  8 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgag 107  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||       |||||||||||||| ||||||||    
T  1941951 ccaataatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtgatgtctgag 1941852  T
Q  108 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgt-tactatatctacaatgtatatg 206  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  1941851 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatg 1941752  T
Q  207 acccgtgcggcagcacgggtggaaagtctagt 238  Q
    ||||||||||||||||||||||||||||||||    
T  1941751 acccgtgcggcagcacgggtggaaagtctagt 1941720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 193; E-Value: 1e-105
Query Start/End: Original strand, 8 - 240
Target Start/End: Original strand, 3898420 - 3898653
Alignment:
Q  8 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgag 107  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||       |||||||||||||||||||||||    
T  3898420 ccaataatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgag 3898519  T
Q  108 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgt-tactatatctacaatgtatatg 206  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||    
T  3898520 gttcaaattccaacatctgcatatatttgggaccacatatttcattctctttaatatgcattgagatttgtttttgtctactatatctacaatgtatatg 3898619  T
Q  207 acccgtgcggcagcacgggtggaaagtctagtaa 240  Q
    ||||||||||||||||||||||||||||||||||    
T  3898620 acccgtgcggcagcacgggtggaaagtctagtaa 3898653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 191; E-Value: 1e-103
Query Start/End: Original strand, 8 - 238
Target Start/End: Complemental strand, 49506580 - 49506349
Alignment:
Q  8 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgag 107  Q
    |||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||       |||||||||||||||||||||||    
T  49506580 ccaataatataatattgacatataattttaacaaaagaatgaagtaccacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgag 49506481  T
Q  108 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgt-tactatatctacaatgtatatg 206  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  49506480 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatg 49506381  T
Q  207 acccgtgcggcagcacgggtggaaagtctagt 238  Q
    ||||||||||||| ||||||||||||||||||    
T  49506380 acccgtgcggcagtacgggtggaaagtctagt 49506349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 188; E-Value: 1e-102
Query Start/End: Original strand, 8 - 238
Target Start/End: Original strand, 54073025 - 54073259
Alignment:
Q  8 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgag 107  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||       |||||||||||||||||||||||    
T  54073025 ccaataatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgag 54073124  T
Q  108 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgt-tactatatctacaatg---tat 203  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||   |||    
T  54073125 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtactat 54073224  T
Q  204 atgacccgtgcggcagcacgggtggaaagtctagt 238  Q
    |||||||||||||||||||||||||||||||||||    
T  54073225 atgacccgtgcggcagcacgggtggaaagtctagt 54073259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 184; E-Value: 2e-99
Query Start/End: Original strand, 8 - 239
Target Start/End: Original strand, 26948796 - 26949028
Alignment:
Q  8 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgag 107  Q
    |||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||       |||||||||| ||||||||||||    
T  26948796 ccaataatataacattgacatataattttaacaaaagaatgaagtaacacacgattgataaaagttaatatttttaaggtgaataagtgtggtgtctgag 26948895  T
Q  108 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgt-tactatatctacaatgtatatg 206  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||    
T  26948896 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactacatctacaatgtatatg 26948995  T
Q  207 acccgtgcggcagcacgggtggaaagtctagta 239  Q
    |||||||||||||||||||||||||||||||||    
T  26948996 acccgtgcggcagcacgggtggaaagtctagta 26949028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 179; E-Value: 2e-96
Query Start/End: Original strand, 8 - 238
Target Start/End: Complemental strand, 4584665 - 4584434
Alignment:
Q  8 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgag 107  Q
    |||| ||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||       |||||||||| ||||||||||||    
T  4584665 ccaataatataacattgacatataattttaacaaaagaatgaagtaagacacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctgag 4584566  T
Q  108 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgt-tactatatctacaatgtatatg 206  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||    
T  4584565 gttcaaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactacatctacaatgtatatg 4584466  T
Q  207 acccgtgcggcagcacgggtggaaagtctagt 238  Q
    ||||||||||||||||||||||||||||||||    
T  4584465 acccgtgcggcagcacgggtggaaagtctagt 4584434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 179; E-Value: 2e-96
Query Start/End: Original strand, 8 - 238
Target Start/End: Original strand, 20671247 - 20671478
Alignment:
Q  8 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgag 107  Q
    |||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||       |||||||||| ||||||||||||    
T  20671247 ccaataatataacattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctgag 20671346  T
Q  108 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgt-tactatatctacaatgtatatg 206  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||    
T  20671347 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactacatctacaatgtatatg 20671446  T
Q  207 acccgtgcggcagcacgggtggaaagtctagt 238  Q
    || |||| ||||||||||||||||||||||||    
T  20671447 actcgtgtggcagcacgggtggaaagtctagt 20671478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 179; E-Value: 2e-96
Query Start/End: Original strand, 8 - 238
Target Start/End: Complemental strand, 36076685 - 36076454
Alignment:
Q  8 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgag 107  Q
    |||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||       |||||||||| |||||||||||     
T  36076685 ccaataatataacattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctgaa 36076586  T
Q  108 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgt-tactatatctacaatgtatatg 206  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||| ||||||||||||||||    
T  36076585 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttaatatgcattgagatttgtttttgtctactacatctacaatgtatatg 36076486  T
Q  207 acccgtgcggcagcacgggtggaaagtctagt 238  Q
    ||||||||||||||||||||||||||||||||    
T  36076485 acccgtgcggcagcacgggtggaaagtctagt 36076454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 169; E-Value: 1e-90
Query Start/End: Original strand, 8 - 236
Target Start/End: Original strand, 31488409 - 31488638
Alignment:
Q  8 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgag 107  Q
    |||| ||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||       |||||||||| ||||||||||||    
T  31488409 ccaataatataacattgacatataattttaacaaaagaataaagtaacacacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctgag 31488508  T
Q  108 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgt-tactatatctacaatgtatatg 206  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||     
T  31488509 gttcgaattccaacatctgcatatatttgggacaacatatttcattctctttgatatgcattgagatttgtttttgtctactacatctacaatgtatata 31488608  T
Q  207 acccgtgcggcagcacgggtggaaagtcta 236  Q
    |||||||||||||||||| |||||||||||    
T  31488609 acccgtgcggcagcacggatggaaagtcta 31488638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 161; E-Value: 9e-86
Query Start/End: Original strand, 8 - 236
Target Start/End: Original strand, 39146438 - 39146667
Alignment:
Q  8 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgag 107  Q
    |||| ||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||       |||||||||| ||||||||||||    
T  39146438 ccaataatataacattgacatataattttaacaaaagaatgaagtaagacacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctgag 39146537  T
Q  108 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgt-tactatatctacaatgtatatg 206  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||| ||||| ||||||||||||||||    
T  39146538 gttcgaattccaacatctgcatatatttgggaccacatattttattctctttgatatgcattgagatttatttttgtctactacatctacaatgtatatg 39146637  T
Q  207 acccgtgcggcagcacgggtggaaagtcta 236  Q
    |||||||||||| ||| | |||||||||||    
T  39146638 acccgtgcggcaacacagatggaaagtcta 39146667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 159; E-Value: 1e-84
Query Start/End: Original strand, 8 - 238
Target Start/End: Complemental strand, 45558115 - 45557884
Alignment:
Q  8 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgag 107  Q
    |||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||       |||||||||| ||||||||||||    
T  45558115 ccaataatataatattgacatataattttaacaaaagaatgaagtaatacacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctgag 45558016  T
Q  108 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgt-tactatatctacaatgtatatg 206  Q
    ||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||| ||||||    
T  45558015 gttcgaatttcaacatctgcatatacttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactacatctacaatatatatg 45557916  T
Q  207 acccgtgcggcagcacgggtggaaagtctagt 238  Q
    ||| || ||| ||||| |||||||||||||||    
T  45557915 acctgtacggtagcactggtggaaagtctagt 45557884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 155; E-Value: 3e-82
Query Start/End: Original strand, 8 - 238
Target Start/End: Original strand, 49478206 - 49478437
Alignment:
Q  8 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgag 107  Q
    |||| ||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||       |||||||||| ||||||||||||    
T  49478206 ccaataatataacattgacatataattttaataaaagaatgaagtaacacacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctgag 49478305  T
Q  108 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgt-tactatatctacaatgtatatg 206  Q
    |||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||| | |||||  ||||||||||| |||    
T  49478306 gttcgaattccaacatttgcatatatttgggaccacatatttcattatctttgatatgtattgagatttgtttttatctactacgtctacaatgtaaatg 49478405  T
Q  207 acccgtgcggcagcacgggtggaaagtctagt 238  Q
    || |||||||||||||||||||||||||||||    
T  49478406 actcgtgcggcagcacgggtggaaagtctagt 49478437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 154; E-Value: 1e-81
Query Start/End: Original strand, 55 - 240
Target Start/End: Complemental strand, 40014837 - 40014651
Alignment:
Q  55 cacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgaggttcgaattccaacatctgcatatatttgggaccacatatttcattc 154  Q
    |||||||||||||||||||||||       ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40014837 cacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgaggttcgaattccaacatctgcatatatttgggaccacatatttcattc 40014738  T
Q  155 tctttgatatgcattgagatttgtttttg-ttactatatctacaatgtatatgacccgtgcggcagcacgggtggaaagtctagtaa 240  Q
    ||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40014737 tctttgatatgcattgagatttgtttttgtttattatatctacaatgtatatgacccgtgcggcagcacgggtggaaagtctagtaa 40014651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 149; E-Value: 1e-78
Query Start/End: Original strand, 8 - 233
Target Start/End: Complemental strand, 55041820 - 55041588
Alignment:
Q  8 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaat------taatannnnnnnggtgaataagcgtggtg 101  Q
    |||| ||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||      |||||       |||||||||| ||||||    
T  55041820 ccaataatataacattgacatataattttaacaaaagagtgaagtaacacacgattgataaaaataaaaattaatatttttaaggtgaataagtgtggtg 55041721  T
Q  102 tctgaggttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgt-tactatatctacaatg 200  Q
    |||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||    
T  55041720 tctgaggttcgaattcaaacatctgcatatatttggaaccacatatttcattctctttgatatgcattgagatttgtttttgtctactacatctacaatg 55041621  T
Q  201 tatatgacccgtgcggcagcacgggtggaaagt 233  Q
    |||||||||||||||| ||||||||||||||||    
T  55041620 tatatgacccgtgcggtagcacgggtggaaagt 55041588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 8 - 196
Target Start/End: Original strand, 24119205 - 24119394
Alignment:
Q  8 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgag 107  Q
    |||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||       |||||||||| ||||||||||||    
T  24119205 ccaataatataacattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctgag 24119304  T
Q  108 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgt-tactatatctac 196  Q
    ||| ||||||||||||||||||||||||||||||| |||||||||| ||||| |||||||||||||||||||||||| ||||| ||||||    
T  24119305 gtttgaattccaacatctgcatatatttgggaccatatatttcattatctttaatatgcattgagatttgtttttgtctactacatctac 24119394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 85 - 206
Target Start/End: Complemental strand, 26051457 - 26051334
Alignment:
Q  85 ggtgaataagcgtggtgtctgaggttcgaattccaacatctgcatatatttggg-accacatatttcattctctttgatatgcattgagatttgtttttg 183  Q
    ||||||||||||||||||||||||||||||||||||| || ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  26051457 ggtgaataagcgtggtgtctgaggttcgaattccaacctcagcatatatttggggaccacatatttcattctctttgatatgcattgagatttgtttttg 26051358  T
Q  184 t-tactatatctacaatgtatatg 206  Q
    | ||||| ||||||||||||||||    
T  26051357 tctactacatctacaatgtatatg 26051334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 133 - 238
Target Start/End: Complemental strand, 6460273 - 6460168
Alignment:
Q  133 tttgggaccacatatttcattctctttgatatgcattgagatttgtttttgt-tactatatctacaatgtatatgacccgtgcggcagcacgggtggaaa 231  Q
    ||||||||||||||||| ||||| ||||||||| |||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||    
T  6460273 tttgggaccacatattttattct-tttgatatgtattgagatttgtttttgtctactacatctacaatgtatatgacccgtgcggcagcacgggtggaaa 6460175  T
Q  232 gtctagt 238  Q
    |||||||    
T  6460174 gtctagt 6460168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 8 - 77
Target Start/End: Complemental strand, 26052309 - 26052240
Alignment:
Q  8 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaata 77  Q
    |||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26052309 ccaataatataacattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaata 26052240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 194 - 229
Target Start/End: Original strand, 37099729 - 37099764
Alignment:
Q  194 tacaatgtatatgacccgtgcggcagcacgggtgga 229  Q
    ||||||||||||||||||||||||||||||||||||    
T  37099729 tacaatgtatatgacccgtgcggcagcacgggtgga 37099764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 13 - 56
Target Start/End: Complemental strand, 1942033 - 1941990
Alignment:
Q  13 aatataatattgacatataattttaacaaaagaatgaagtaaca 56  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  1942033 aatataacattaacatataatttttacaaaagaatgaagtaaca 1941990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 13 - 56
Target Start/End: Original strand, 3898338 - 3898381
Alignment:
Q  13 aatataatattgacatataattttaacaaaagaatgaagtaaca 56  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  3898338 aatataacattaacatataatttttacaaaagaatgaagtaaca 3898381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 13 - 56
Target Start/End: Original strand, 12264115 - 12264158
Alignment:
Q  13 aatataatattgacatataattttaacaaaagaatgaagtaaca 56  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  12264115 aatataacattaacatataatttttacaaaagaatgaagtaaca 12264158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 13 - 56
Target Start/End: Original strand, 20671166 - 20671209
Alignment:
Q  13 aatataatattgacatataattttaacaaaagaatgaagtaaca 56  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  20671166 aatataacattaacatataatttttacaaaagaatgaagtaaca 20671209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 13 - 56
Target Start/End: Original strand, 21098219 - 21098262
Alignment:
Q  13 aatataatattgacatataattttaacaaaagaatgaagtaaca 56  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  21098219 aatataacattaacatataatttttacaaaagaatgaagtaaca 21098262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 13 - 56
Target Start/End: Complemental strand, 26052392 - 26052349
Alignment:
Q  13 aatataatattgacatataattttaacaaaagaatgaagtaaca 56  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  26052392 aatataacattaacatataatttttacaaaagaatgaagtaaca 26052349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 13 - 56
Target Start/End: Original strand, 26948689 - 26948732
Alignment:
Q  13 aatataatattgacatataattttaacaaaagaatgaagtaaca 56  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  26948689 aatataacattaacatataatttttacaaaagaatgaagtaaca 26948732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 13 - 56
Target Start/End: Original strand, 31488329 - 31488372
Alignment:
Q  13 aatataatattgacatataattttaacaaaagaatgaagtaaca 56  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  31488329 aatataacattaacatataatttttacaaaagaatgaagtaaca 31488372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 13 - 56
Target Start/End: Original strand, 34121271 - 34121314
Alignment:
Q  13 aatataatattgacatataattttaacaaaagaatgaagtaaca 56  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  34121271 aatataacattaacatataatttttacaaaagaatgaagtaaca 34121314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 13 - 56
Target Start/End: Complemental strand, 38654241 - 38654198
Alignment:
Q  13 aatataatattgacatataattttaacaaaagaatgaagtaaca 56  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  38654241 aatataacattaacatataatttttacaaaagaatgaagtaaca 38654198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 13 - 56
Target Start/End: Complemental strand, 43363924 - 43363881
Alignment:
Q  13 aatataatattgacatataattttaacaaaagaatgaagtaaca 56  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  43363924 aatataacattaacatataatttttacaaaagaatgaagtaaca 43363881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 13 - 56
Target Start/End: Original strand, 49478124 - 49478167
Alignment:
Q  13 aatataatattgacatataattttaacaaaagaatgaagtaaca 56  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  49478124 aatataacattaacatataatttttacaaaagaatgaagtaaca 49478167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 13 - 56
Target Start/End: Original strand, 49672478 - 49672521
Alignment:
Q  13 aatataatattgacatataattttaacaaaagaatgaagtaaca 56  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  49672478 aatataacattaacatataatttttacaaaagaatgaagtaaca 49672521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 198 - 229
Target Start/End: Complemental strand, 53556951 - 53556920
Alignment:
Q  198 atgtatatgacccgtgcggcagcacgggtgga 229  Q
    ||||||||||||||||||||||||||||||||    
T  53556951 atgtatatgacccgtgcggcagcacgggtgga 53556920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 13 - 56
Target Start/End: Complemental strand, 55041901 - 55041858
Alignment:
Q  13 aatataatattgacatataattttaacaaaagaatgaagtaaca 56  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  55041901 aatataacattaacatataatttttacaaaagaatgaagtaaca 55041858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 185 - 239
Target Start/End: Complemental strand, 13364075 - 13364021
Alignment:
Q  185 tactatatctacaatgtatatgacccgtgcggcagcacgggtggaaagtctagta 239  Q
    ||||| || ||||||||||||||||||||||||||||  |||| || ||||||||    
T  13364075 tactacatatacaatgtatatgacccgtgcggcagcagaggtgaaatgtctagta 13364021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 197 - 226
Target Start/End: Complemental strand, 5561594 - 5561565
Alignment:
Q  197 aatgtatatgacccgtgcggcagcacgggt 226  Q
    ||||||||||||||||||||||||||||||    
T  5561594 aatgtatatgacccgtgcggcagcacgggt 5561565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 202 - 239
Target Start/End: Original strand, 25437286 - 25437323
Alignment:
Q  202 atatgacccgtgcggcagcacgggtggaaagtctagta 239  Q
    |||||||||||||||||||||||||| || ||||||||    
T  25437286 atatgacccgtgcggcagcacgggtgcaaggtctagta 25437323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 13 - 54
Target Start/End: Complemental strand, 36076764 - 36076723
Alignment:
Q  13 aatataatattgacatataattttaacaaaagaatgaagtaa 54  Q
    ||||||| ||| |||||||||||| |||||||||||||||||    
T  36076764 aatataacattaacatataatttttacaaaagaatgaagtaa 36076723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 191 - 239
Target Start/End: Original strand, 926210 - 926258
Alignment:
Q  191 atctacaatgtatatgacccgtgcggcagcacgggtggaaagtctagta 239  Q
    ||||| ||||||||||||||| ||| ||||||||||| || ||||||||    
T  926210 atctataatgtatatgacccgggcgtcagcacgggtgaaaggtctagta 926258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 202 - 238
Target Start/End: Complemental strand, 20370394 - 20370358
Alignment:
Q  202 atatgacccgtgcggcagcacgggtggaaagtctagt 238  Q
    ||||||||||||||||||||||||||||  |||||||    
T  20370394 atatgacccgtgcggcagcacgggtggatggtctagt 20370358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 200; Significance: 1e-109; HSPs: 32)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 200; E-Value: 1e-109
Query Start/End: Original strand, 8 - 239
Target Start/End: Original strand, 41664508 - 41664740
Alignment:
Q  8 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgag 107  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||       |||||||||||||||||||||||    
T  41664508 ccaataatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgag 41664607  T
Q  108 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgt-tactatatctacaatgtatatg 206  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  41664608 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatg 41664707  T
Q  207 acccgtgcggcagcacgggtggaaagtctagta 239  Q
    |||||||||||||||||||||||||||||||||    
T  41664708 acccgtgcggcagcacgggtggaaagtctagta 41664740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 8 - 244
Target Start/End: Original strand, 41663235 - 41663472
Alignment:
Q  8 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgag 107  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||       |||||||||||||||||||||||    
T  41663235 ccaataatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgag 41663334  T
Q  108 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgt-tactatatctacaatgtatatg 206  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  41663335 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatg 41663434  T
Q  207 acccgtgcggcagcacgggtggaaagtctagtaaatat 244  Q
    |||| |||||||||||||||||||||||||||| ||||    
T  41663435 acccatgcggcagcacgggtggaaagtctagtatatat 41663472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 8 - 238
Target Start/End: Original strand, 6120550 - 6120781
Alignment:
Q  8 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgag 107  Q
    |||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||       |||||||||||||||||||||||    
T  6120550 ccaataatataatattgacatatagttttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgag 6120649  T
Q  108 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgt-tactatatctacaatgtatatg 206  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  6120650 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatg 6120749  T
Q  207 acccgtgcggcagcacgggtggaaagtctagt 238  Q
    ||||||||||||||||||||||||||||||||    
T  6120750 acccgtgcggcagcacgggtggaaagtctagt 6120781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 8 - 238
Target Start/End: Original strand, 18351549 - 18351780
Alignment:
Q  8 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgag 107  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||       |||||||||||||||||| ||||    
T  18351549 ccaataatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtttgag 18351648  T
Q  108 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgt-tactatatctacaatgtatatg 206  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  18351649 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatg 18351748  T
Q  207 acccgtgcggcagcacgggtggaaagtctagt 238  Q
    ||||||||||||||||||||||||||||||||    
T  18351749 acccgtgcggcagcacgggtggaaagtctagt 18351780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 188; E-Value: 1e-102
Query Start/End: Original strand, 8 - 239
Target Start/End: Original strand, 44902080 - 44902311
Alignment:
Q  8 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgag 107  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||        ||||||||||||||||||||||    
T  44902080 ccaataatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaatta-tattttttttgtgaataagcgtggtgtctgag 44902178  T
Q  108 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgt-tactatatctacaatgtatatg 206  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  44902179 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatg 44902278  T
Q  207 acccgtgcggcagcacgggtggaaagtctagta 239  Q
    |||||||||||||||||||||||||||||||||    
T  44902279 acccgtgcggcagcacgggtggaaagtctagta 44902311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 179; E-Value: 2e-96
Query Start/End: Original strand, 8 - 238
Target Start/End: Complemental strand, 19596594 - 19596363
Alignment:
Q  8 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgag 107  Q
    |||| ||| ||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||       |||||||||||||||||||||||    
T  19596594 ccaataatttaacattgacatataattttaacaaaagaatgaagtaacacacaattgataaaaattaatatttttaaggtgaataagcgtggtgtctgag 19596495  T
Q  108 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgt-tactatatctacaatgtatatg 206  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||| ||||||||||||||||    
T  19596494 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttaatatgcattgagatttgtttttgtctactacatctacaatgtatatg 19596395  T
Q  207 acccgtgcggcagcacgggtggaaagtctagt 238  Q
    ||||||||||||||||||||||||||||||||    
T  19596394 acccgtgcggcagcacgggtggaaagtctagt 19596363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 178; E-Value: 6e-96
Query Start/End: Original strand, 13 - 238
Target Start/End: Original strand, 20544828 - 20545054
Alignment:
Q  13 aatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgaggttcg 112  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||       |||||||||||||||||| | |||||||    
T  20544828 aatataatattgacatataattttaacaaaagaatgaagtaccacacgattgataaaaattaatatttttttggtgaataagcgtggtgttttaggttcg 20544927  T
Q  113 aattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgt-tactatatctacaatgtatatgacccg 211  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||    
T  20544928 aattctaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctaccatatctacaatgtatatgacccg 20545027  T
Q  212 tgcggcagcacgggtggaaagtctagt 238  Q
    |||||||||||||||||||||||||||    
T  20545028 tgcggcagcacgggtggaaagtctagt 20545054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 171; E-Value: 9e-92
Query Start/End: Original strand, 8 - 238
Target Start/End: Original strand, 8700259 - 8700490
Alignment:
Q  8 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgag 107  Q
    |||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||       |||||| ||  ||||||| ||||    
T  8700259 ccaataatataacattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttaaggtgaaaaaatgtggtgtatgag 8700358  T
Q  108 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgt-tactatatctacaatgtatatg 206  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||| ||||||||||||||||    
T  8700359 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgaaatttgtttttgtctactacatctacaatgtatatg 8700458  T
Q  207 acccgtgcggcagcacgggtggaaagtctagt 238  Q
    ||||||||||||||||||||||||||||||||    
T  8700459 acccgtgcggcagcacgggtggaaagtctagt 8700490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 169; E-Value: 1e-90
Query Start/End: Original strand, 8 - 236
Target Start/End: Original strand, 31424007 - 31424236
Alignment:
Q  8 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgag 107  Q
    |||| ||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||       |||||||||| ||||||| ||||    
T  31424007 ccaataatataacattgacatataattttaacaaaagaatgaagtaacacacaattgataaaaattaatatttttaaggtgaataagtgtggtgtatgag 31424106  T
Q  108 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgt-tactatatctacaatgtatatg 206  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||    
T  31424107 gttcgaattccaacatctacatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactacatctacaatgtatatg 31424206  T
Q  207 acccgtgcggcagcacgggtggaaagtcta 236  Q
    || |||||||||||||||||||||||||||    
T  31424207 actcgtgcggcagcacgggtggaaagtcta 31424236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 168; E-Value: 6e-90
Query Start/End: Original strand, 8 - 239
Target Start/End: Original strand, 42441958 - 42442194
Alignment:
Q  8 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgag 107  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||       |||||||||||||||||||||||    
T  42441958 ccaataatataatattgacatataattttaacaaaagaatgaagtaacac--gattgataaaaattaatatttttttggtgaataagcgtggtgtctgag 42442055  T
Q  108 gttcg------aattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgt-tactatatctacaatg 200  Q
    |||||      |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  42442056 gttcgaattcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatg 42442155  T
Q  201 tatatgacccgtgcggcagcacgggtggaaagtctagta 239  Q
    |||||||||||||||||| ||||||||||||||||||||    
T  42442156 tatatgacccgtgcggcaacacgggtggaaagtctagta 42442194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 154; E-Value: 1e-81
Query Start/End: Original strand, 8 - 241
Target Start/End: Original strand, 42055197 - 42055431
Alignment:
Q  8 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgag 107  Q
    |||| ||||||| |||||||||  || |||||||||||||||||||||||||||||||||||||||||||       |||||||||| ||||||||||||    
T  42055197 ccaataatataacattgacata--atcttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctgag 42055294  T
Q  108 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgt-tactatatctacaatgtatatg 206  Q
    |||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||    
T  42055295 gttcgaattccaacatctgcatatatttgggatcacctatttcattctctttgatatgcattgagatttgtttttgtctactacatctacaatgtatatg 42055394  T
Q  207 acccgtgcg--gcagcacgggtggaaagtctagtaaa 241  Q
    |||||||||  | ||||||||||||||||||||||||    
T  42055395 acccgtgcggtgtagcacgggtggaaagtctagtaaa 42055431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 153; E-Value: 5e-81
Query Start/End: Original strand, 8 - 236
Target Start/End: Complemental strand, 26231490 - 26231261
Alignment:
Q  8 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgag 107  Q
    |||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||       | |||||||| ||||||||||||    
T  26231490 ccaataatataacattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttaagatgaataagtgtggtgtctgag 26231391  T
Q  108 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgt-tactatatctacaatgtatatg 206  Q
    ||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||| |||||||||||| ||||| |||||||||||||||     
T  26231390 gttcgaattccaacatctgaatatatttgagaccacatatttcattctctttgatatgcattgaaatttgtttttgtctactacatctacaatgtatata 26231291  T
Q  207 acccgtgcggcagcacgggtggaaagtcta 236  Q
    ||| |||||| |||||||||| ||||||||    
T  26231290 acctgtgcggtagcacgggtgaaaagtcta 26231261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 151; E-Value: 8e-80
Query Start/End: Original strand, 8 - 238
Target Start/End: Complemental strand, 36279685 - 36279455
Alignment:
Q  8 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgag 107  Q
    |||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||       |||||||||| ||||| ||||||    
T  36279685 ccaataatataacattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttaaggtgaataagtgtggtatctgag 36279586  T
Q  108 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgt-tactatatctacaatgtatatg 206  Q
     |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||| ||||| ||||||||||||||||    
T  36279585 attcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatacattgatatttgtttttgtctactacatctacaatgtatatg 36279486  T
Q  207 acccgtgcggcagcacgggtggaaagtctagt 238  Q
    || |||||  | ||||||||||||||||||||    
T  36279485 actcgtgctac-gcacgggtggaaagtctagt 36279455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 146; E-Value: 8e-77
Query Start/End: Original strand, 86 - 238
Target Start/End: Complemental strand, 27944949 - 27944796
Alignment:
Q  86 gtgaataagcgtggtgtctgaggttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgt- 184  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  27944949 gtgaataagcgtggtgtctgaggttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtc 27944850  T
Q  185 tactatatctacaatgtatatgacccgtgcggcagcacgggtggaaagtctagt 238  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27944849 tactatatctacaatgtatatgacccgtgcggcagcacgggtggaaagtctagt 27944796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 13 - 238
Target Start/End: Complemental strand, 34007935 - 34007714
Alignment:
Q  13 aatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgaggttcg 112  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||       |||| ||||| |||||||||||||||||    
T  34007935 aatataacattgacatataattttaacaaaagaatgaagtaacacacgatttataaaaattaatatttttaaggtggataagtgtggtgtctgaggttcg 34007836  T
Q  113 aattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgt-tactatatctacaatgtatatgacccg 211  Q
    |||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||| |||| |||||    
T  34007835 aattccaacatcggcatatatttgggactacatatttcattctctttgatatgcattgagatttgtttttgtctactacatctacaatggatattacccg 34007736  T
Q  212 tgcggcagcacgggtggaaagtctagt 238  Q
    |     |||||||||||||||||||||    
T  34007735 t-----agcacgggtggaaagtctagt 34007714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 8 - 207
Target Start/End: Complemental strand, 999462 - 999262
Alignment:
Q  8 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgag 107  Q
    |||| ||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||       |||||||||| ||||||||||||    
T  999462 ccaataatataacattgacatataattttaacaaaagaatgaagtaagacacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctgag 999363  T
Q  108 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgt-tactatatctacaatgtatatg 206  Q
    |||||||||||||||||| ||||||||||||||||||| ||| |||||||||||||||||||||||||||||||| | ||||| |||||||| |||||||    
T  999362 gttcgaattccaacatctacatatatttgggaccacatgttttattctctttgatatgcattgagatttgtttttatctactacatctacaaagtatatg 999263  T
Q  207 a 207  Q
    |    
T  999262 a 999262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 111; E-Value: 6e-56
Query Start/End: Original strand, 23 - 197
Target Start/End: Original strand, 16214837 - 16215012
Alignment:
Q  23 tgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgaggttcgaattccaaca 122  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||       |||||||||| |||||||  |||||||||||||| |||    
T  16214837 tgacatataattttaacaaaagaatgaagtaacacacgattaataaaaattaatatttttaaggtgaataagtgtggtgttagaggttcgaattcctaca 16214936  T
Q  123 tctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgt-tactatatctaca 197  Q
    | ||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||| ||||| |||||||    
T  16214937 tttgcatatattttggaccacatatttcattctctttgatatgcattgagatttatttttgtctactacatctaca 16215012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 106; E-Value: 6e-53
Query Start/End: Original strand, 85 - 213
Target Start/End: Complemental strand, 692356 - 692227
Alignment:
Q  85 ggtgaataagcgtggtgtctgaggttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgt 184  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  692356 ggtgaataagtgtggtgtctgaggttcgaattccaacatctgcatatatttgggaccatatatttcattctctttgatatgcattgagatttgtttttgt 692257  T
Q  185 -tactatatctacaatgtatatgacccgtg 213  Q
     ||||| || ||||||||||||||||||||    
T  692256 ctactacatttacaatgtatatgacccgtg 692227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 194 - 239
Target Start/End: Complemental strand, 25889083 - 25889038
Alignment:
Q  194 tacaatgtatatgacccgtgcggcagcacgggtggaaagtctagta 239  Q
    |||| ||||||||||||||||||||||||| |||||||||||||||    
T  25889083 tacattgtatatgacccgtgcggcagcacgagtggaaagtctagta 25889038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 13 - 56
Target Start/End: Complemental strand, 19596677 - 19596634
Alignment:
Q  13 aatataatattgacatataattttaacaaaagaatgaagtaaca 56  Q
    ||||||| ||| ||||||||||||||||||||||||||||||||    
T  19596677 aatataacattaacatataattttaacaaaagaatgaagtaaca 19596634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 194 - 229
Target Start/End: Original strand, 31572466 - 31572501
Alignment:
Q  194 tacaatgtatatgacccgtgcggcagcacgggtgga 229  Q
    ||||||||||||||||||||||||||||||||||||    
T  31572466 tacaatgtatatgacccgtgcggcagcacgggtgga 31572501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 199 - 239
Target Start/End: Original strand, 2988911 - 2988951
Alignment:
Q  199 tgtatatgacccgtgcggcagcacgggtggaaagtctagta 239  Q
    |||||||||||| |||||||||||||||| |||||||||||    
T  2988911 tgtatatgacccatgcggcagcacgggtgaaaagtctagta 2988951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 13 - 56
Target Start/End: Original strand, 6120467 - 6120510
Alignment:
Q  13 aatataatattgacatataattttaacaaaagaatgaagtaaca 56  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  6120467 aatataacattaacatataatttttacaaaagaatgaagtaaca 6120510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 13 - 56
Target Start/End: Original strand, 16214741 - 16214784
Alignment:
Q  13 aatataatattgacatataattttaacaaaagaatgaagtaaca 56  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  16214741 aatataacattaacatataatttttacaaaagaatgaagtaaca 16214784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 13 - 56
Target Start/End: Original strand, 18351467 - 18351510
Alignment:
Q  13 aatataatattgacatataattttaacaaaagaatgaagtaaca 56  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  18351467 aatataacattaacatataatttttacaaaagaatgaagtaaca 18351510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 13 - 56
Target Start/End: Complemental strand, 26231570 - 26231527
Alignment:
Q  13 aatataatattgacatataattttaacaaaagaatgaagtaaca 56  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  26231570 aatataacattaacatataatttttacaaaagaatgaagtaaca 26231527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 13 - 56
Target Start/End: Original strand, 31423924 - 31423967
Alignment:
Q  13 aatataatattgacatataattttaacaaaagaatgaagtaaca 56  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  31423924 aatataacattaacatataatttttacaaaagaatgaagtaaca 31423967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 13 - 56
Target Start/End: Complemental strand, 34008023 - 34007980
Alignment:
Q  13 aatataatattgacatataattttaacaaaagaatgaagtaaca 56  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  34008023 aatataacattaacatataatttttacaaaagaatgaagtaaca 34007980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 13 - 56
Target Start/End: Original strand, 41663152 - 41663195
Alignment:
Q  13 aatataatattgacatataattttaacaaaagaatgaagtaaca 56  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  41663152 aatataacattaacatataatttttacaaaagaatgaagtaaca 41663195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 13 - 56
Target Start/End: Original strand, 42441876 - 42441919
Alignment:
Q  13 aatataatattgacatataattttaacaaaagaatgaagtaaca 56  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  42441876 aatataacattaacatataatttttacaaaagaatgaagtaaca 42441919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 188 - 238
Target Start/End: Complemental strand, 22139611 - 22139561
Alignment:
Q  188 tatatctacaatgtatatgacccgtgcggcagcacgggtggaaagtctagt 238  Q
    ||||| |||| |||||||||||||||| ||| |||||||| ||||||||||    
T  22139611 tatatttacattgtatatgacccgtgctgcaacacgggtgaaaagtctagt 22139561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 202 - 238
Target Start/End: Original strand, 17839249 - 17839285
Alignment:
Q  202 atatgacccgtgcggcagcacgggtggaaagtctagt 238  Q
    ||||||||||||||||||||||||||||  |||||||    
T  17839249 atatgacccgtgcggcagcacgggtggatggtctagt 17839285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 200; Significance: 1e-109; HSPs: 43)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 200; E-Value: 1e-109
Query Start/End: Original strand, 8 - 239
Target Start/End: Original strand, 4266379 - 4266611
Alignment:
Q  8 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgag 107  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||       |||||||||||||||||||||||    
T  4266379 ccaataatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgag 4266478  T
Q  108 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgt-tactatatctacaatgtatatg 206  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  4266479 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatg 4266578  T
Q  207 acccgtgcggcagcacgggtggaaagtctagta 239  Q
    |||||||||||||||||||||||||||||||||    
T  4266579 acccgtgcggcagcacgggtggaaagtctagta 4266611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 200; E-Value: 1e-109
Query Start/End: Original strand, 8 - 239
Target Start/End: Complemental strand, 38913978 - 38913746
Alignment:
Q  8 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgag 107  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||       |||||||||||||||||||||||    
T  38913978 ccaataatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgag 38913879  T
Q  108 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgt-tactatatctacaatgtatatg 206  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  38913878 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatg 38913779  T
Q  207 acccgtgcggcagcacgggtggaaagtctagta 239  Q
    |||||||||||||||||||||||||||||||||    
T  38913778 acccgtgcggcagcacgggtggaaagtctagta 38913746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 199; E-Value: 1e-108
Query Start/End: Original strand, 8 - 238
Target Start/End: Complemental strand, 34888917 - 34888686
Alignment:
Q  8 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgag 107  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||       |||||||||||||||||||||||    
T  34888917 ccaataatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgag 34888818  T
Q  108 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgt-tactatatctacaatgtatatg 206  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  34888817 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatg 34888718  T
Q  207 acccgtgcggcagcacgggtggaaagtctagt 238  Q
    ||||||||||||||||||||||||||||||||    
T  34888717 acccgtgcggcagcacgggtggaaagtctagt 34888686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 191; E-Value: 1e-103
Query Start/End: Original strand, 8 - 246
Target Start/End: Complemental strand, 2951597 - 2951358
Alignment:
Q  8 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgag 107  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||       |||||||||||||||||||||||    
T  2951597 ccaataatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgag 2951498  T
Q  108 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttg-ttactatatctacaatgtatatg 206  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||| ||||| |||||||||||||    
T  2951497 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttttttttgtttattatatttacaatgtatatg 2951398  T
Q  207 acccgtgcggcagcacgggtggaaagtctagtaaatatga 246  Q
    |||||||||||||||||||||||||||||||||| |||||    
T  2951397 acccgtgcggcagcacgggtggaaagtctagtaagtatga 2951358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 183; E-Value: 6e-99
Query Start/End: Original strand, 27 - 241
Target Start/End: Original strand, 1231813 - 1232028
Alignment:
Q  27 atataattttaacaaaagaatgaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgaggttcgaattccaacatctg 126  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||||||||||||||||||    
T  1231813 atataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgaggttcgaattccaacatctg 1231912  T
Q  127 catatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgt-tactatatctacaatgtatatgacccgtgcggcagcacggg 225  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||    
T  1231913 catatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatttacaatgtatatgacccgtgcggcagcacggg 1232012  T
Q  226 tggaaagtctagtaaa 241  Q
    ||||||||||||||||    
T  1232013 tggaaagtctagtaaa 1232028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 175; E-Value: 4e-94
Query Start/End: Original strand, 8 - 214
Target Start/End: Original strand, 50151058 - 50151265
Alignment:
Q  8 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgag 107  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||       |||||||||||||||||||||||    
T  50151058 ccaataatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgag 50151157  T
Q  108 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgt-tactatatctacaatgtatatg 206  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  50151158 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatg 50151257  T
Q  207 acccgtgc 214  Q
    ||||||||    
T  50151258 acccgtgc 50151265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 171; E-Value: 9e-92
Query Start/End: Original strand, 8 - 238
Target Start/End: Original strand, 9216029 - 9216260
Alignment:
Q  8 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgag 107  Q
    |||| ||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||       ||| |||||| ||||||||||||    
T  9216029 ccaataatataacattgacatataattttaacaaaagaatgaagtaagacacgattgataaaaattaatatttttaaggtaaataagtgtggtgtctgag 9216128  T
Q  108 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgt-tactatatctacaatgtatatg 206  Q
    |||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||| | ||||||||||||||||||||||    
T  9216129 gttcgaattccaacatctgcatatatttgggaccacatgttttattctctttgatatgcattgagatttgtttttatctactatatctacaatgtatatg 9216228  T
Q  207 acccgtgcggcagcacgggtggaaagtctagt 238  Q
    ||||||||||||||||||||||||||||||||    
T  9216229 acccgtgcggcagcacgggtggaaagtctagt 9216260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 167; E-Value: 2e-89
Query Start/End: Original strand, 8 - 238
Target Start/End: Complemental strand, 23482938 - 23482707
Alignment:
Q  8 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgag 107  Q
    |||| |||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||       |||||||||| ||||||| ||||    
T  23482938 ccaataatataacgttgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttcaggtgaataagtgtggtgtatgag 23482839  T
Q  108 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgt-tactatatctacaatgtatatg 206  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||| ||||| ||||||||||||||||    
T  23482838 gttcgaattccaacatctgcatatatttgggaccacatatttcatgctctttgatatgcattgagatttgtatttgtctactacatctacaatgtatatg 23482739  T
Q  207 acccgtgcggcagcacgggtggaaagtctagt 238  Q
    || |||||||||||||||||||||||||||||    
T  23482738 actcgtgcggcagcacgggtggaaagtctagt 23482707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 163; E-Value: 6e-87
Query Start/End: Original strand, 8 - 246
Target Start/End: Original strand, 38444629 - 38444868
Alignment:
Q  8 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgag 107  Q
    |||| ||||||| ||||||||||||||||| ||||||||||||||||||||  |||||||||||||||||       |||||||||| |||||||||||     
T  38444629 ccaataatataacattgacatataattttatcaaaagaatgaagtaacacattattgataaaaattaatatttttaaggtgaataagtgtggtgtctgaa 38444728  T
Q  108 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgt-tactatatctacaatgtatatg 206  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||    
T  38444729 gttcgaatttcaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactacatctacaatgtatatg 38444828  T
Q  207 acccgtgcggcagcacgggtggaaagtctagtaaatatga 246  Q
    |||| ||||||| ||||||||||||||||||||| |||||    
T  38444829 acccatgcggcatcacgggtggaaagtctagtaattatga 38444868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 162; E-Value: 2e-86
Query Start/End: Original strand, 8 - 233
Target Start/End: Original strand, 35614065 - 35614291
Alignment:
Q  8 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgag 107  Q
    |||| ||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||       |||||||||| ||||||||| |     
T  35614065 ccaataatatgacattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttcaggtgaataagtgtggtgtcttaa 35614164  T
Q  108 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgt-tactatatctacaatgtatatg 206  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| || |||||||||||||    
T  35614165 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactacatttacaatgtatatg 35614264  T
Q  207 acccgtgcggcagcacgggtggaaagt 233  Q
    |||||||||| ||||||||||||||||    
T  35614265 acccgtgcggtagcacgggtggaaagt 35614291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 160; E-Value: 3e-85
Query Start/End: Original strand, 8 - 239
Target Start/End: Complemental strand, 18706739 - 18706508
Alignment:
Q  8 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgag 107  Q
    |||| |||||||  ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||       |||||||||| ||||||| ||||    
T  18706739 ccaataatataacgttgacatataattttaacaaaagaatgaagttacacacgattgataaaaattaatatttttcaggtgaataagtgtggtgtatgag 18706640  T
Q  108 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgt-tactatatctacaatgtatatg 206  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||| ||||| ||||||||||||||||    
T  18706639 gttcgaattccaacatctgcatatattt-ggaccacatatttcattctctttgatatgcattaagatttgtttttgtctactacatctacaatgtatatg 18706541  T
Q  207 acccgtgcggcagcacgggtggaaagtctagta 239  Q
    || ||||||||||||||||||||||||||||||    
T  18706540 actcgtgcggcagcacgggtggaaagtctagta 18706508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 159; E-Value: 1e-84
Query Start/End: Original strand, 8 - 238
Target Start/End: Original strand, 7333942 - 7334173
Alignment:
Q  8 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgag 107  Q
    |||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||       |||||||||| ||||||||||||    
T  7333942 ccaataatataacattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttatggtgaataagtgtggtgtctgag 7334041  T
Q  108 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgt-tactatatctacaatgtatatg 206  Q
    ||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||| |||||| || |||||     
T  7334042 gtttgaattccaacatctgcatatatttgggaccacatattttattctctttgatatgcattgagatttgtttttgtctactacatctaccatctatata 7334141  T
Q  207 acccgtgcggcagcacgggtggaaagtctagt 238  Q
    |||||||| |||||||||||| ||||||||||    
T  7334142 acccgtgcagcagcacgggtgaaaagtctagt 7334173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 154; E-Value: 1e-81
Query Start/End: Original strand, 13 - 238
Target Start/End: Complemental strand, 52687339 - 52687114
Alignment:
Q  13 aatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgaggttcg 112  Q
    ||||||| |||||||||||||||||| |||| |||||||||||||||||||||||||||||||||       |||||||||| ||||||| |||||||||    
T  52687339 aatataacattgacatataattttaataaaaaaatgaagtaacacacgattgataaaaattaatatttttaaggtgaataagtgtggtgt-tgaggttcg 52687241  T
Q  113 aattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgt-tactatatctacaatgtatatgacccg 211  Q
     |||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||| ||||| |||||||||||||||||||||    
T  52687240 gattccaacatctgcatatatttgggaccacatatttcattctctttcataggcattgagatttgtttttgtatactacatctacaatgtatatgacccg 52687141  T
Q  212 tgcggcagcacgggtggaaagtctagt 238  Q
    |||| ||||||||||||||||||||||    
T  52687140 tgcgacagcacgggtggaaagtctagt 52687114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 150; E-Value: 3e-79
Query Start/End: Original strand, 8 - 238
Target Start/End: Complemental strand, 18855463 - 18855233
Alignment:
Q  8 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgag 107  Q
    |||| ||||||| |||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||       |||||||||| ||||||||||||    
T  18855463 ccaataatataacattgacatataattttaacaaaagaatgaagtaatacatgattgataaaaattaatatttttaaggtgaataagtgtggtgtctgag 18855364  T
Q  108 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgttactatatctacaatgtatatga 207  Q
    ||||||||| |||||||| ||||||||||||||||||| ||| ||||||||||||||||||||||||||| |||   ||||  |||||||||||||||||    
T  18855363 gttcgaatttcaacatctacatatatttgggaccacatgttttattctctttgatatgcattgagatttgatttgtctactgcatctacaatgtatatga 18855264  T
Q  208 cccgtgcggcagcacgggtggaaagtctagt 238  Q
    |||||||||||||||||||||||||||||||    
T  18855263 cccgtgcggcagcacgggtggaaagtctagt 18855233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 85 - 238
Target Start/End: Complemental strand, 31018354 - 31018200
Alignment:
Q  85 ggtgaataagcgtggtgtctgaggttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgt 184  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31018354 ggtgaataagcgtggtgtctgaggttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgt 31018255  T
Q  185 -tactatatctacaatgtatatgacccgtgcggcagcacgggtggaaagtctagt 238  Q
     ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31018254 ctactatatctacaatgtatatgacccgtgcggcagcacgggtggaaagtctagt 31018200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 145; E-Value: 3e-76
Query Start/End: Original strand, 85 - 236
Target Start/End: Original strand, 50326076 - 50326228
Alignment:
Q  85 ggtgaataagcgtggtgtctgaggttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgt 184  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  50326076 ggtgaataagcgtggtgtctgaggttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgt 50326175  T
Q  185 -tactatatctacaatgtatatgacccgtgcggcagcacgggtggaaagtcta 236  Q
     ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  50326176 ctactatatctacaatgtatatgacccgtgcggcagcacgggtggaaagtcta 50326228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 135; E-Value: 3e-70
Query Start/End: Original strand, 8 - 198
Target Start/End: Original strand, 39727978 - 39728169
Alignment:
Q  8 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgag 107  Q
    |||| ||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||       |||||||||| ||||||||||||    
T  39727978 ccaataatataacattgacatataattttaacaaaagaatgaagtaagacacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctgag 39728077  T
Q  108 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgt-tactatatctacaa 198  Q
    |||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||| ||||| ||||||||    
T  39728078 gttcgaattccaacatctgcatatatttgggaccacatgttttattctctttgatatgcattgagatttgtttttgtctactacatctacaa 39728169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 21 - 184
Target Start/End: Original strand, 35614827 - 35614989
Alignment:
Q  21 attgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgaggttcgaattccaa 120  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||       ||| |||||| |||||||||||||||||||||||||    
T  35614827 attgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatattttaa-ggtaaataagtgtggtgtctgaggttcgaattccaa 35614925  T
Q  121 catctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgt 184  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||    
T  35614926 catctgcatatatttgagaccacatatttcattctctttgatatgcattaagatttgtttttgt 35614989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 111; E-Value: 6e-56
Query Start/End: Original strand, 21 - 184
Target Start/End: Complemental strand, 19764768 - 19764605
Alignment:
Q  21 attgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgaggttcgaattccaa 120  Q
    |||||||| |||||||||||||| ||||||||||||||||||| |||||||||||||       |||||||||| |||||||||||||||||||||| ||    
T  19764768 attgacatgtaattttaacaaaataatgaagtaacacacgattcataaaaattaatatttttaaggtgaataagtgtggtgtctgaggttcgaattcaaa 19764669  T
Q  121 catctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgt 184  Q
    ||| ||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||    
T  19764668 catttgcatatatttgggaccacatatttcattctttttaatatgcattgagatttgtttttgt 19764605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 145 - 239
Target Start/End: Original strand, 29942153 - 29942248
Alignment:
Q  145 tatttcattctctttgatatgcattgagatttgtttttgt-tactatatctacaatgtatatgacccgtgcggcagcacgggtggaaagtctagta 239  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29942153 tatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatgacccgtgcggcagcacgggtggaaagtctagta 29942248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 8 - 144
Target Start/End: Original strand, 2590333 - 2590468
Alignment:
Q  8 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgag 107  Q
    |||| ||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||       |||||||||| ||||||||||||    
T  2590333 ccaataatataacattgacatataattttaacaaaagaatgaagtaagacacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctgag 2590432  T
Q  108 gttcgaattccaacatctgcatatatttgggaccaca 144  Q
    ||| |||||| ||||||||||||||||||| ||||||    
T  2590433 gtt-gaattcgaacatctgcatatatttggaaccaca 2590468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 8 - 148
Target Start/End: Original strand, 19768462 - 19768602
Alignment:
Q  8 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgag 107  Q
    |||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||       | |||||||| ||||||||||||    
T  19768462 ccaataatataacattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaataatatttttaagatgaataagtgtggtgtctgag 19768561  T
Q  108 gttcgaattccaacatctgcatatatttgggaccacatatt 148  Q
    ||||||| | |||||||| ||| ||||||| ||||||||||    
T  19768562 gttcgaaattcaacatctacatgtatttggaaccacatatt 19768602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 122 - 205
Target Start/End: Original strand, 5061335 - 5061419
Alignment:
Q  122 atctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgt-tactatatctacaatgtatat 205  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||    
T  5061335 atctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactacatctacaatgtatat 5061419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 191 - 238
Target Start/End: Original strand, 52957058 - 52957105
Alignment:
Q  191 atctacaatgtatatgacccgtgcggcagcacgggtggaaagtctagt 238  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||    
T  52957058 atctacaatgtatatgacccgtgcggcagcacgggtggagagtctagt 52957105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 195 - 238
Target Start/End: Original strand, 2590466 - 2590509
Alignment:
Q  195 acaatgtatatgacccgtgcggcagcacgggtggaaagtctagt 238  Q
    |||||||||||||| |||||||||||||||||||||||||||||    
T  2590466 acaatgtatatgactcgtgcggcagcacgggtggaaagtctagt 2590509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 202 - 238
Target Start/End: Original strand, 26497649 - 26497685
Alignment:
Q  202 atatgacccgtgcggcagcacgggtggaaagtctagt 238  Q
    |||||||||||||||||||||||||| ||||||||||    
T  26497649 atatgacccgtgcggcagcacgggtgcaaagtctagt 26497685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 197 - 229
Target Start/End: Complemental strand, 28947495 - 28947463
Alignment:
Q  197 aatgtatatgacccgtgcggcagcacgggtgga 229  Q
    |||||||||||||||||||||||||||||||||    
T  28947495 aatgtatatgacccgtgcggcagcacgggtgga 28947463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 174 - 229
Target Start/End: Complemental strand, 29387952 - 29387896
Alignment:
Q  174 tttgtttttgt-tactatatctacaatgtatatgacccgtgcggcagcacgggtgga 229  Q
    ||||||||||| ||||| |  |||||||||||||||||||||||||| |||||||||    
T  29387952 tttgtttttgtctactacacttacaatgtatatgacccgtgcggcagtacgggtgga 29387896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 13 - 56
Target Start/End: Original strand, 1231725 - 1231768
Alignment:
Q  13 aatataatattgacatataattttaacaaaagaatgaagtaaca 56  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  1231725 aatataacattaacatataatttttacaaaagaatgaagtaaca 1231768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 13 - 56
Target Start/End: Complemental strand, 2951679 - 2951636
Alignment:
Q  13 aatataatattgacatataattttaacaaaagaatgaagtaaca 56  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  2951679 aatataacattaacatataatttttacaaaagaatgaagtaaca 2951636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 13 - 56
Target Start/End: Original strand, 4266297 - 4266340
Alignment:
Q  13 aatataatattgacatataattttaacaaaagaatgaagtaaca 56  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  4266297 aatataacattaacatataatttttacaaaagaatgaagtaaca 4266340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 13 - 56
Target Start/End: Complemental strand, 18706816 - 18706773
Alignment:
Q  13 aatataatattgacatataattttaacaaaagaatgaagtaaca 56  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  18706816 aatataacattaacatataatttttacaaaagaatgaagtaaca 18706773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 13 - 56
Target Start/End: Complemental strand, 19764857 - 19764814
Alignment:
Q  13 aatataatattgacatataattttaacaaaagaatgaagtaaca 56  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  19764857 aatataacattaacatataatttttacaaaagaatgaagtaaca 19764814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 13 - 56
Target Start/End: Original strand, 19768382 - 19768425
Alignment:
Q  13 aatataatattgacatataattttaacaaaagaatgaagtaaca 56  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  19768382 aatataacattaacatataatttttacaaaagaatgaagtaaca 19768425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 13 - 56
Target Start/End: Complemental strand, 23483015 - 23482972
Alignment:
Q  13 aatataatattgacatataattttaacaaaagaatgaagtaaca 56  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  23483015 aatataacattaacatataatttttacaaaagaatgaagtaaca 23482972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 13 - 56
Target Start/End: Original strand, 35613984 - 35614027
Alignment:
Q  13 aatataatattgacatataattttaacaaaagaatgaagtaaca 56  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  35613984 aatataaaattaacatataatttttacaaaagaatgaagtaaca 35614027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 13 - 56
Target Start/End: Original strand, 35614734 - 35614777
Alignment:
Q  13 aatataatattgacatataattttaacaaaagaatgaagtaaca 56  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  35614734 aatataacattaacatataatttttacaaaagaatgaagtaaca 35614777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 13 - 56
Target Start/End: Complemental strand, 38914060 - 38914017
Alignment:
Q  13 aatataatattgacatataattttaacaaaagaatgaagtaaca 56  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  38914060 aatataacattaacatataatttttacaaaagaatgaagtaaca 38914017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 13 - 56
Target Start/End: Complemental strand, 52036353 - 52036310
Alignment:
Q  13 aatataatattgacatataattttaacaaaagaatgaagtaaca 56  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  52036353 aatataacattaacatataatttttacaaaagaatgaagtaaca 52036310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 202 - 238
Target Start/End: Complemental strand, 4325490 - 4325454
Alignment:
Q  202 atatgacccgtgcggcagcacgggtggaaagtctagt 238  Q
    |||||||||||||||||||||||||| || |||||||    
T  4325490 atatgacccgtgcggcagcacgggtgcaaggtctagt 4325454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 13 - 53
Target Start/End: Original strand, 7333863 - 7333903
Alignment:
Q  13 aatataatattgacatataattttaacaaaagaatgaagta 53  Q
    ||||||| ||| |||||||||||| ||||||||||||||||    
T  7333863 aatataacattaacatataatttttacaaaagaatgaagta 7333903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 186 - 234
Target Start/End: Original strand, 36465872 - 36465920
Alignment:
Q  186 actatatctacaatgtatatgacccgtgcggcagcacgggtggaaagtc 234  Q
    ||||||| ||||  |||||||||| ||||||||||||||||| ||||||    
T  36465872 actatatttacaccgtatatgacctgtgcggcagcacgggtgaaaagtc 36465920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 203 - 239
Target Start/End: Original strand, 41871384 - 41871420
Alignment:
Q  203 tatgacccgtgcggcagcacgggtggaaagtctagta 239  Q
    ||||||||||||||||||||||||| || ||||||||    
T  41871384 tatgacccgtgcggcagcacgggtgcaaggtctagta 41871420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 199; Significance: 1e-108; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 199; E-Value: 1e-108
Query Start/End: Original strand, 8 - 238
Target Start/End: Original strand, 46272 - 46503
Alignment:
Q  8 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgag 107  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||       |||||||||||||||||||||||    
T  46272 ccaataatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgag 46371  T
Q  108 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgt-tactatatctacaatgtatatg 206  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  46372 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatg 46471  T
Q  207 acccgtgcggcagcacgggtggaaagtctagt 238  Q
    ||||||||||||||||||||||||||||||||    
T  46472 acccgtgcggcagcacgggtggaaagtctagt 46503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 199; Significance: 1e-108; HSPs: 38)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 199; E-Value: 1e-108
Query Start/End: Original strand, 8 - 238
Target Start/End: Complemental strand, 12597496 - 12597265
Alignment:
Q  8 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgag 107  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||       |||||||||||||||||||||||    
T  12597496 ccaataatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgag 12597397  T
Q  108 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgt-tactatatctacaatgtatatg 206  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  12597396 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatg 12597297  T
Q  207 acccgtgcggcagcacgggtggaaagtctagt 238  Q
    ||||||||||||||||||||||||||||||||    
T  12597296 acccgtgcggcagcacgggtggaaagtctagt 12597265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 8 - 236
Target Start/End: Original strand, 19997663 - 19997892
Alignment:
Q  8 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgag 107  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||       |||||||||||||||||||||||    
T  19997663 ccaataatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgag 19997762  T
Q  108 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgt-tactatatctacaatgtatatg 206  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  19997763 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatg 19997862  T
Q  207 acccgtgcggcagcacgggtggaaagtcta 236  Q
    ||||||||||||||||||||||||||||||    
T  19997863 acccgtgcggcagcacgggtggaaagtcta 19997892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 196; E-Value: 1e-106
Query Start/End: Original strand, 8 - 239
Target Start/End: Original strand, 33645940 - 33646172
Alignment:
Q  8 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgag 107  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||       |||||||||||||||||||||||    
T  33645940 ccaataatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgag 33646039  T
Q  108 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgt-tactatatctacaatgtatatg 206  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  33646040 gttcgaattccaacatctgcatatatttggaaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatg 33646139  T
Q  207 acccgtgcggcagcacgggtggaaagtctagta 239  Q
    |||||||||||||||||||||||||||||||||    
T  33646140 acccgtgcggcagcacgggtggaaagtctagta 33646172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 193; E-Value: 1e-105
Query Start/End: Original strand, 8 - 240
Target Start/End: Complemental strand, 28099828 - 28099595
Alignment:
Q  8 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgag 107  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||       |||||||||||||||||||||||    
T  28099828 ccaataatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgag 28099729  T
Q  108 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgt-tactatatctacaatgtatatg 206  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||    
T  28099728 gttcgaattccaacatcagcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctattatatctacaatgtatatg 28099629  T
Q  207 acccgtgcggcagcacgggtggaaagtctagtaa 240  Q
    ||||||||||||||||||||||||||||||||||    
T  28099628 acccgtgcggcagcacgggtggaaagtctagtaa 28099595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 178; E-Value: 6e-96
Query Start/End: Original strand, 8 - 238
Target Start/End: Original strand, 2266766 - 2267005
Alignment:
Q  8 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtg--------g 99  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||       ||||||||||||||        |    
T  2266766 ccaataatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtcgtgg 2266865  T
Q  100 tgtctgaggttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgt-tactatatctacaa 198  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  2266866 tgtctgaggttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaa 2266965  T
Q  199 tgtatatgacccgtgcggcagcacgggtggaaagtctagt 238  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  2266966 tgtatatgacccgtgcggcagcacgggtggaaagtctagt 2267005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 175; E-Value: 4e-94
Query Start/End: Original strand, 14 - 240
Target Start/End: Original strand, 13533771 - 13533998
Alignment:
Q  14 atataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgaggttcga 113  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||       |||||||||| ||||||||||||||||||    
T  13533771 atataacattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctgaggttcga 13533870  T
Q  114 attccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgt-tactatatctacaatgtatatgacccgt 212  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| | ||||| ||||||||||||||||||||||    
T  13533871 attccaacatctgcatatatttgggaccacatatttcattctctttgatatacattgagatttgtttttatctactacatctacaatgtatatgacccgt 13533970  T
Q  213 gcggcagcacgggtggaaagtctagtaa 240  Q
    ||||||||||||||||||| ||||||||    
T  13533971 gcggcagcacgggtggaaaatctagtaa 13533998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 171; E-Value: 9e-92
Query Start/End: Original strand, 8 - 238
Target Start/End: Original strand, 17202430 - 17202661
Alignment:
Q  8 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgag 107  Q
    |||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||       |||||||||| ||||||||||||    
T  17202430 ccaataatataacattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctgag 17202529  T
Q  108 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgt-tactatatctacaatgtatatg 206  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||| ||||| ||||||||||||||||    
T  17202530 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgtgatttgtatttgtctactacatctacaatgtatatg 17202629  T
Q  207 acccgtgcggcagcacgggtggaaagtctagt 238  Q
    ||  ||||||||||||||||||||||||||||    
T  17202630 acttgtgcggcagcacgggtggaaagtctagt 17202661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 167; E-Value: 2e-89
Query Start/End: Original strand, 8 - 238
Target Start/End: Original strand, 3592891 - 3593122
Alignment:
Q  8 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgag 107  Q
    |||| ||||||| ||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||       |||||||||| ||||||||||||    
T  3592891 ccaataatataacattgagatataattttaacaaaagaatgaagtaacacacgattcataaaaattaatatttttaaggtgaataagtgtggtgtctgag 3592990  T
Q  108 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgt-tactatatctacaatgtatatg 206  Q
    ||||||||||||||||||| |||||||||||| |||||||||||||||||| ||||||||||||||||||||||||| ||||| ||||||||||||||||    
T  3592991 gttcgaattccaacatctgaatatatttgggatcacatatttcattctcttggatatgcattgagatttgtttttgtctactacatctacaatgtatatg 3593090  T
Q  207 acccgtgcggcagcacgggtggaaagtctagt 238  Q
    ||||||||||||||||||||||||||||||||    
T  3593091 acccgtgcggcagcacgggtggaaagtctagt 3593122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 167; E-Value: 2e-89
Query Start/End: Original strand, 8 - 238
Target Start/End: Complemental strand, 10584959 - 10584728
Alignment:
Q  8 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgag 107  Q
    |||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||       |||||||||| || |||||||||    
T  10584959 ccaataatataacattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttaaggtgaataagtgtagtgtctgag 10584860  T
Q  108 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgt-tactatatctacaatgtatatg 206  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||| ||||||||||||||||    
T  10584859 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattaagatttgtttttgtctactacatctacaatgtatatg 10584760  T
Q  207 acccgtgcggcagcacgggtggaaagtctagt 238  Q
    |||| |  ||||||||||||||||||||||||    
T  10584759 acccatatggcagcacgggtggaaagtctagt 10584728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 167; E-Value: 2e-89
Query Start/End: Original strand, 13 - 239
Target Start/End: Original strand, 15044725 - 15044952
Alignment:
Q  13 aatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgaggttcg 112  Q
    ||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||       |||||||||| |||||||||||||||||    
T  15044725 aatataacattgacatataattttaacaaaagaatgaagtaaaacacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctgaggttcg 15044824  T
Q  113 aattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgt-tactatatctacaatgtatatgacccg 211  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||| ||||||| ||||| ||||||||||||||||||| |    
T  15044825 aattccaacatctgcatatatttgggaccacatattttattctctttgatatgcattgaaatttatttttgtctactacatctacaatgtatatgacctg 15044924  T
Q  212 tgcggcagcacgggtggaaagtctagta 239  Q
    ||||||||||||||||||||||||||||    
T  15044925 tgcggcagcacgggtggaaagtctagta 15044952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 156; E-Value: 8e-83
Query Start/End: Original strand, 8 - 239
Target Start/End: Original strand, 2005426 - 2005658
Alignment:
Q  8 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgag 107  Q
    |||| ||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||       |||||||||| ||||||||||||    
T  2005426 ccaataatataacattgacatataattttaacaaaagaatgaagtaagacacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctgag 2005525  T
Q  108 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgt-tactatatctacaatgtatatg 206  Q
    ||||||||||||||||||||||||||||  |||||||| ||| |||||||||||||||||||||||||||||||||| ||||  ||||||||||||||||    
T  2005526 gttcgaattccaacatctgcatatatttaagaccacatgttttattctctttgatatgcattgagatttgtttttgtctactgcatctacaatgtatatg 2005625  T
Q  207 acccgtgcggcagcacgggtggaaagtctagta 239  Q
    ||||||||||| ||||| |||||||||||||||    
T  2005626 acccgtgcggccgcacgagtggaaagtctagta 2005658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 8 - 172
Target Start/End: Original strand, 17594814 - 17594979
Alignment:
Q  8 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaatt-aatannnnnnnggtgaataagcgtggtgtctga 106  Q
    |||| ||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||       |||||||||| |||||||||||    
T  17594814 ccaataatataacattgacatataattttaacaaaagaatgaagtaacatacgattgataaaaatttaatatttttaaggtgaataagtgtggtgtctga 17594913  T
Q  107 ggttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgag 172  Q
     ||| ||||| |||||||| ||||||||||||||||||||||||||| ||||||||||||||||||    
T  17594914 agtttgaatttcaacatctccatatatttgggaccacatatttcattttctttgatatgcattgag 17594979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 8 - 136
Target Start/End: Original strand, 8539598 - 8539726
Alignment:
Q  8 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgag 107  Q
    |||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||       |||||||||| ||||||||||||    
T  8539598 ccaataatataacattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctgag 8539697  T
Q  108 gttcgaattccaacatctgcatatatttg 136  Q
    |||||||||||||||||||||||||||||    
T  8539698 gttcgaattccaacatctgcatatatttg 8539726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 114 - 238
Target Start/End: Complemental strand, 1405688 - 1405563
Alignment:
Q  114 attccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgt-tactatatctacaatgtatatgacccgt 212  Q
    |||||||||||||||||||||||||| ||||||||||||||||||| |||| ||||||||||||||||| | ||||| ||||||||||||||||||||||    
T  1405688 attccaacatctgcatatatttgggatcacatatttcattctctttaatatacattgagatttgtttttatctactacatctacaatgtatatgacccgt 1405589  T
Q  213 gcggcagcacgggtggaaagtctagt 238  Q
    ||||||||||||||||||| ||||||    
T  1405588 gcggcagcacgggtggaaaatctagt 1405563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 8 - 137
Target Start/End: Original strand, 25448747 - 25448876
Alignment:
Q  8 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgag 107  Q
    |||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||       |||||||||||||||||||||||    
T  25448747 ccaataatataatattgacatataattttaacaaaaaaatgaagtaacacacgattgataaaaattaatatatttttggtgaataagcgtggtgtctgag 25448846  T
Q  108 gttcgaattccaacatctgcatatatttgg 137  Q
     ||||||||||||||||| |||||||||||    
T  25448847 tttcgaattccaacatctacatatatttgg 25448876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 100 - 202
Target Start/End: Original strand, 33035523 - 33035626
Alignment:
Q  100 tgtctgaggttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgt-tactatatctacaa 198  Q
    |||||||| ||||||||||| |||||||||||||||| |||||||| ||| ||||||||||| |||||||||||||||||||||| ||||| ||||||||    
T  33035523 tgtctgagattcgaattccagcatctgcatatatttgagaccacatgttttattctctttgacatgcattgagatttgtttttgtctactacatctacaa 33035622  T
Q  199 tgta 202  Q
    ||||    
T  33035623 tgta 33035626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 185 - 239
Target Start/End: Original strand, 8539729 - 8539783
Alignment:
Q  185 tactatatctacaatgtatatgacccgtgcggcagcacgggtggaaagtctagta 239  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  8539729 tactacatctacaatgtatatgacccgtgcggcagcacgggtggaaagtctagta 8539783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 197 - 238
Target Start/End: Complemental strand, 162710 - 162669
Alignment:
Q  197 aatgtatatgacccgtgcggcagcacgggtggaaagtctagt 238  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  162710 aatgtatatgacccgtgcggcagcacgggtggaaagtctagt 162669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 185 - 238
Target Start/End: Complemental strand, 6300762 - 6300709
Alignment:
Q  185 tactatatctacaatgtatatgacccgtgcggcagcacgggtggaaagtctagt 238  Q
    ||||| || |||||||||||||||||||||||||||||||||| | ||||||||    
T  6300762 tactagatatacaatgtatatgacccgtgcggcagcacgggtgcatagtctagt 6300709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 185 - 238
Target Start/End: Complemental strand, 6307572 - 6307519
Alignment:
Q  185 tactatatctacaatgtatatgacccgtgcggcagcacgggtggaaagtctagt 238  Q
    ||||| || |||||||||||||||||||||||||||||||||| | ||||||||    
T  6307572 tactagatatacaatgtatatgacccgtgcggcagcacgggtgcatagtctagt 6307519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 194 - 229
Target Start/End: Complemental strand, 8657108 - 8657073
Alignment:
Q  194 tacaatgtatatgacccgtgcggcagcacgggtgga 229  Q
    ||||||||||||||||||||||||||||||||||||    
T  8657108 tacaatgtatatgacccgtgcggcagcacgggtgga 8657073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 196 - 239
Target Start/End: Complemental strand, 14986433 - 14986390
Alignment:
Q  196 caatgtatatgacccgtgcggcagcacgggtggaaagtctagta 239  Q
    ||||||||||||||||||| |||||||||||| |||||||||||    
T  14986433 caatgtatatgacccgtgcagcagcacgggtgcaaagtctagta 14986390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 198 - 238
Target Start/End: Complemental strand, 15432377 - 15432337
Alignment:
Q  198 atgtatatgacccgtgcggcagcacgggtggaaagtctagt 238  Q
    |||||||||||||||||||| |||||||| |||||||||||    
T  15432377 atgtatatgacccgtgcggccgcacgggtagaaagtctagt 15432337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 188 - 236
Target Start/End: Complemental strand, 25342687 - 25342639
Alignment:
Q  188 tatatctacaatgtatatgacccgtgcggcagcacgggtggaaagtcta 236  Q
    ||||| |||| |||||||||| |||||||||||||||||| ||||||||    
T  25342687 tatatttacattgtatatgactcgtgcggcagcacgggtgaaaagtcta 25342639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 13 - 56
Target Start/End: Original strand, 2266684 - 2266727
Alignment:
Q  13 aatataatattgacatataattttaacaaaagaatgaagtaaca 56  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  2266684 aatataacattaacatataatttttacaaaagaatgaagtaaca 2266727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 188 - 239
Target Start/End: Complemental strand, 2965509 - 2965458
Alignment:
Q  188 tatatctacaatgtatatgacccgtgcggcagcacgggtggaaagtctagta 239  Q
    ||||| |||| ||| |||||||||||||||||||||||||  ||||||||||    
T  2965509 tatatttacattgtttatgacccgtgcggcagcacgggtgataagtctagta 2965458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 13 - 56
Target Start/End: Complemental strand, 10585039 - 10584996
Alignment:
Q  13 aatataatattgacatataattttaacaaaagaatgaagtaaca 56  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  10585039 aatataacattaacatataatttttacaaaagaatgaagtaaca 10584996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 13 - 56
Target Start/End: Complemental strand, 12597578 - 12597535
Alignment:
Q  13 aatataatattgacatataattttaacaaaagaatgaagtaaca 56  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  12597578 aatataacattaacatataatttttacaaaagaatgaagtaaca 12597535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 13 - 56
Target Start/End: Original strand, 15044639 - 15044682
Alignment:
Q  13 aatataatattgacatataattttaacaaaagaatgaagtaaca 56  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  15044639 aatataacattaacatataatttttacaaaagaatgaagtaaca 15044682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 13 - 56
Target Start/End: Original strand, 17202348 - 17202391
Alignment:
Q  13 aatataatattgacatataattttaacaaaagaatgaagtaaca 56  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  17202348 aatataacattaacatataatttttacaaaagaatgaagtaaca 17202391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 13 - 56
Target Start/End: Original strand, 17594733 - 17594776
Alignment:
Q  13 aatataatattgacatataattttaacaaaagaatgaagtaaca 56  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  17594733 aatataacattaacatataatttttacaaaagaatgaagtaaca 17594776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 13 - 56
Target Start/End: Original strand, 19997580 - 19997623
Alignment:
Q  13 aatataatattgacatataattttaacaaaagaatgaagtaaca 56  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  19997580 aatataacattaacatataatttttacaaaagaatgaagtaaca 19997623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 194 - 229
Target Start/End: Complemental strand, 24570798 - 24570763
Alignment:
Q  194 tacaatgtatatgacccgtgcggcagcacgggtgga 229  Q
    |||||||||||||||||||| |||||||||||||||    
T  24570798 tacaatgtatatgacccgtgtggcagcacgggtgga 24570763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 13 - 56
Target Start/End: Complemental strand, 28099911 - 28099868
Alignment:
Q  13 aatataatattgacatataattttaacaaaagaatgaagtaaca 56  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  28099911 aatataacattaacatataatttttacaaaagaatgaagtaaca 28099868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 194 - 229
Target Start/End: Complemental strand, 33289114 - 33289079
Alignment:
Q  194 tacaatgtatatgacccgtgcggcagcacgggtgga 229  Q
    |||||| |||||||||||||||||||||||||||||    
T  33289114 tacaatctatatgacccgtgcggcagcacgggtgga 33289079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 13 - 56
Target Start/End: Original strand, 33645858 - 33645901
Alignment:
Q  13 aatataatattgacatataattttaacaaaagaatgaagtaaca 56  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  33645858 aatataacattaacatataatttttacaaaagaatgaagtaaca 33645901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 197 - 238
Target Start/End: Complemental strand, 24165132 - 24165091
Alignment:
Q  197 aatgtatatgacccgtgcggcagcacgggtggaaagtctagt 238  Q
    ||||||||||||||||||| |||||||||||  |||||||||    
T  24165132 aatgtatatgacccgtgcgtcagcacgggtgataagtctagt 24165091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 202 - 238
Target Start/End: Original strand, 2737142 - 2737178
Alignment:
Q  202 atatgacccgtgcggcagcacgggtggaaagtctagt 238  Q
    ||||||||||||||||||||||||||||  |||||||    
T  2737142 atatgacccgtgcggcagcacgggtggatggtctagt 2737178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 199; Significance: 1e-108; HSPs: 48)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 199; E-Value: 1e-108
Query Start/End: Original strand, 8 - 238
Target Start/End: Original strand, 52434622 - 52434853
Alignment:
Q  8 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgag 107  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||       |||||||||||||||||||||||    
T  52434622 ccaataatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgag 52434721  T
Q  108 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgt-tactatatctacaatgtatatg 206  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  52434722 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatg 52434821  T
Q  207 acccgtgcggcagcacgggtggaaagtctagt 238  Q
    ||||||||||||||||||||||||||||||||    
T  52434822 acccgtgcggcagcacgggtggaaagtctagt 52434853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 8 - 240
Target Start/End: Complemental strand, 30825153 - 30824920
Alignment:
Q  8 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgag 107  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||       |||||||||||||||||||||||    
T  30825153 ccaataatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgag 30825054  T
Q  108 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgt-tactatatctacaatgtatatg 206  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  30825053 gttcgaattccaacatctgcatatatttggaaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatg 30824954  T
Q  207 acccgtgcggcagcacgggtggaaagtctagtaa 240  Q
    ||||||||||||||||||||||||||||||||||    
T  30824953 acccgtgcggcagcacgggtggaaagtctagtaa 30824920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 8 - 238
Target Start/End: Complemental strand, 16918119 - 16917888
Alignment:
Q  8 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgag 107  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||       |||||||||||||||||||||||    
T  16918119 ccaataatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgag 16918020  T
Q  108 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgt-tactatatctacaatgtatatg 206  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  16918019 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatg 16917920  T
Q  207 acccgtgcggcagcacgggtggaaagtctagt 238  Q
    |||||||||||||||| |||||||||||||||    
T  16917919 acccgtgcggcagcacaggtggaaagtctagt 16917888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 8 - 240
Target Start/End: Original strand, 37651664 - 37651897
Alignment:
Q  8 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgag 107  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||       |||||||||||||||||| ||||    
T  37651664 ccaataatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtttgag 37651763  T
Q  108 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgt-tactatatctacaatgtatatg 206  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||    
T  37651764 gttcgaattccaacatctgcatatatttgagaccacatatttcattctctttcatatgcattgagatttgtttttgtctactatatctacaatgtatatg 37651863  T
Q  207 acccgtgcggcagcacgggtggaaagtctagtaa 240  Q
    ||||||||||||||||||||||||||||||||||    
T  37651864 acccgtgcggcagcacgggtggaaagtctagtaa 37651897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 8 - 238
Target Start/End: Complemental strand, 53143493 - 53143262
Alignment:
Q  8 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgag 107  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||       |||||||||||||||||||||||    
T  53143493 ccaataatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgag 53143394  T
Q  108 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgt-tactatatctacaatgtatatg 206  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||    
T  53143393 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctattatatctacaatgtatatg 53143294  T
Q  207 acccgtgcggcagcacgggtggaaagtctagt 238  Q
    ||||||||||||||||||||| ||| ||||||    
T  53143293 acccgtgcggcagcacgggtgaaaaatctagt 53143262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 8 - 239
Target Start/End: Complemental strand, 12090691 - 12090458
Alignment:
Q  8 ccaagaatataatattgacatataattttaacaaaagaa-tgaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctga 106  Q
    |||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||       | ||||||||||||||||||||    
T  12090691 ccaataatataatattgacatataattttaacaaaagaaatgaagtaacacacgattgataaaaattaatattttttggttgaataagcgtggtgtctga 12090592  T
Q  107 ggttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgt-tactatatctacaatgtatat 205  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  12090591 ggttcgaattccaacatctacatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatat 12090492  T
Q  206 gacccgtgcggcagcacgggtggaaagtctagta 239  Q
    ||||||||||||||||||||||||||||||||||    
T  12090491 gacccgtgcggcagcacgggtggaaagtctagta 12090458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 183; E-Value: 6e-99
Query Start/End: Original strand, 8 - 238
Target Start/End: Complemental strand, 31966200 - 31965969
Alignment:
Q  8 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgag 107  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||       |||||||||||||||||||||||    
T  31966200 ccaataatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttttggtgaataagcgtggtgtctgag 31966101  T
Q  108 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgt-tactatatctacaatgtatatg 206  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||| || || ||||||||||||||||    
T  31966100 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttatttatgtataataaatctacaatgtatatg 31966001  T
Q  207 acccgtgcggcagcacgggtggaaagtctagt 238  Q
    ||||||||||||||||||||||||||||||||    
T  31966000 acccgtgcggcagcacgggtggaaagtctagt 31965969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 181; E-Value: 1e-97
Query Start/End: Original strand, 14 - 238
Target Start/End: Complemental strand, 16905177 - 16904952
Alignment:
Q  14 atataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgaggttcga 113  Q
    |||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||       |||||||||| ||||||||||||||||||    
T  16905177 atataacattgacatataattttaacaaaagaatgaagtaacacacaattgataaaaattaatatttttaaggtgaataagtgtggtgtctgaggttcga 16905078  T
Q  114 attccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgt-tactatatctacaatgtatatgacccgt 212  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||    
T  16905077 attccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactacatctacaatgtatatgacccgt 16904978  T
Q  213 gcggcagcacgggtggaaagtctagt 238  Q
    ||||||||||||||||||||||||||    
T  16904977 gcggcagcacgggtggaaagtctagt 16904952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 172; E-Value: 2e-92
Query Start/End: Original strand, 8 - 239
Target Start/End: Complemental strand, 33139702 - 33139470
Alignment:
Q  8 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgag 107  Q
    |||| ||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||       |||||||||  ||||||||||||    
T  33139702 ccaataatataacattgacatataattttaacaaaagaatgaagtaatacacgattgataaaaattaatatttttaaggtgaataaatgtggtgtctgag 33139603  T
Q  108 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgt-tactatatctacaatgtatatg 206  Q
    ||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||    
T  33139602 gttcgaattccaacatctgcatatatttgggacaacatatttaattctctttgatatgcattgagatttgtttttgtctactaaatctacaatgtatatg 33139503  T
Q  207 acccgtgcggcagcacgggtggaaagtctagta 239  Q
    |||||||||||||||||||||||||||||||||    
T  33139502 acccgtgcggcagcacgggtggaaagtctagta 33139470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 169; E-Value: 1e-90
Query Start/End: Original strand, 8 - 236
Target Start/End: Original strand, 46256032 - 46256261
Alignment:
Q  8 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgag 107  Q
    |||| ||||||| |||||||||||||||||||||||||||||||||| | ||||||||||||||||||||       |||||||||| ||||||||||||    
T  46256032 ccaataatataacattgacatataattttaacaaaagaatgaagtaagatacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctgag 46256131  T
Q  108 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgt-tactatatctacaatgtatatg 206  Q
    |||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||    
T  46256132 gttccaattccaacatctgcatatatttgggaccacatattttattctctttgatatgcattgagatttgtttttgtctactacatctacaatgtatatg 46256231  T
Q  207 acccgtgcggcagcacgggtggaaagtcta 236  Q
    ||||||||||||||||||||||||||||||    
T  46256232 acccgtgcggcagcacgggtggaaagtcta 46256261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 168; E-Value: 6e-90
Query Start/End: Original strand, 8 - 243
Target Start/End: Complemental strand, 48118762 - 48118529
Alignment:
Q  8 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgag 107  Q
    |||| ||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||       |||||||| | ||||||| ||||    
T  48118762 ccaataatataacattgacatataattttaacaaaagaatgaagtaacacacgattggtaaaaattaatatttttaaggtgaatacgtgtggtgtttgag 48118663  T
Q  108 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgttactatatctacaatgtatatga 207  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||  ||| |||||||||||||||||    
T  48118662 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttatttttgt--ctacatctacaatgtatatga 48118565  T
Q  208 cccgtgcggcagcacgggtggaaagtctagtaaata 243  Q
    | ||||||||||||||||||||||||||||||||||    
T  48118564 ctcgtgcggcagcacgggtggaaagtctagtaaata 48118529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 163; E-Value: 6e-87
Query Start/End: Original strand, 8 - 238
Target Start/End: Complemental strand, 37591035 - 37590804
Alignment:
Q  8 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgag 107  Q
    |||| ||||||| |||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||       |||||||||| ||||||||||||    
T  37591035 ccaataatataacattgacatataattttaacaaaagaatgaagtaagacatgattgataaaaattaatatttttaaggtgaataagtgtggtgtctgag 37590936  T
Q  108 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgt-tactatatctacaatgtatatg 206  Q
    ||||||||| |||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||| |||||| ||||| ||||||||||||||||    
T  37590935 gttcgaatttcaacatctgcatatatttgggaccacatgttttattctctttgatatgcattgagatttgattttgtctactacatctacaatgtatatg 37590836  T
Q  207 acccgtgcggcagcacgggtggaaagtctagt 238  Q
    ||||||||||||||||||||||||||||||||    
T  37590835 acccgtgcggcagcacgggtggaaagtctagt 37590804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 162; E-Value: 2e-86
Query Start/End: Original strand, 8 - 229
Target Start/End: Complemental strand, 44376310 - 44376088
Alignment:
Q  8 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgag 107  Q
    |||| ||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||       |||||||||| ||||||||||||    
T  44376310 ccaataatataacattgacatataattttaacaaaagaatgaagtaagacacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctgag 44376211  T
Q  108 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgt-tactatatctacaatgtatatg 206  Q
    ||||||||||||||||||||||||||||| |||||||| ||| |||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||    
T  44376210 gttcgaattccaacatctgcatatatttgtgaccacatgttttattctctttgatatgcattgagatttgtttttgtctactacatctacaatgtatatg 44376111  T
Q  207 acccgtgcggcagcacgggtgga 229  Q
    |||||||||||||||||||||||    
T  44376110 acccgtgcggcagcacgggtgga 44376088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 161; E-Value: 9e-86
Query Start/End: Original strand, 14 - 238
Target Start/End: Original strand, 35760585 - 35760810
Alignment:
Q  14 atataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgaggttcga 113  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||       |||||||||  ||||||| ||||||||||    
T  35760585 atataacattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttaaggtgaataattgtggtgtttgaggttcga 35760684  T
Q  114 attccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgt-tactatatctacaatgtatatgacccgt 212  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||| | |||||||||||||||||||||||| |||    
T  35760685 attccaacatctgcatatatttgggaccacatatttcattctctttgatatacattgagatttatttttatctactatatctacaatgtatatgactcgt 35760784  T
Q  213 gcggcagcacgggtggaaagtctagt 238  Q
    ||||||||||||||||||| ||||||    
T  35760785 gcggcagcacgggtggaaaatctagt 35760810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 159; E-Value: 1e-84
Query Start/End: Original strand, 8 - 238
Target Start/End: Original strand, 41387124 - 41387355
Alignment:
Q  8 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgag 107  Q
    |||| ||||||| |||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||       |||||||||| ||||||||||||    
T  41387124 ccaataatataacattgacatataattttaacaaaagaatgaagtaagacacgatcgataaaaattaatatttttaaggtgaataagtgtggtgtctgag 41387223  T
Q  108 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgt-tactatatctacaatgtatatg 206  Q
    ||||||||| || ||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  41387224 gttcgaatttcagcatctgcatatatttgggaccacatgttttattctctttgatatgcattgagatttgtttttgtctactatatctacaatgtatatg 41387323  T
Q  207 acccgtgcggcagcacgggtggaaagtctagt 238  Q
    |||||| ||||||||||| |||||||||||||    
T  41387324 acccgtacggcagcacggatggaaagtctagt 41387355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 155; E-Value: 3e-82
Query Start/End: Original strand, 8 - 238
Target Start/End: Complemental strand, 47143031 - 47142800
Alignment:
Q  8 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgag 107  Q
    |||| ||| ||| ||||| ||||||||||||||||||||||||||||||||| || ||||||||||||||       ||||||||||| |||||||||||    
T  47143031 ccaataatttaacattgagatataattttaacaaaagaatgaagtaacacacaatcgataaaaattaatatttttaaggtgaataagcatggtgtctgag 47142932  T
Q  108 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgt-tactatatctacaatgtatatg 206  Q
    |||||||||| |||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||    
T  47142931 gttcgaattctaacatctgcatatatttgagaccacatatgtcattctctttgatatgcattgagatttgtttttgtctactacatctacaatgtatatg 47142832  T
Q  207 acccgtgcggcagcacgggtggaaagtctagt 238  Q
    ||| ||||||||||||||||||||||||||||    
T  47142831 accagtgcggcagcacgggtggaaagtctagt 47142800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 153; E-Value: 5e-81
Query Start/End: Original strand, 8 - 236
Target Start/End: Complemental strand, 45977221 - 45976992
Alignment:
Q  8 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgag 107  Q
    |||| ||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||       |||||||||| ||||||||||||    
T  45977221 ccaataatataacattgacatataattttaacaaaagaatgaagtaacacacaattgataaaaattaatatttttaaggtgaataagtgtggtgtctgag 45977122  T
Q  108 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgt-tactatatctacaatgtatatg 206  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||| ||||| | ||||| |||||| |||||||||    
T  45977121 gttcgaattccaacatctgcatatatttaggaccacatatttcattctctttgatatgcattgatatttatttttatctactacatctacgatgtatatg 45977022  T
Q  207 acccgtgcggcagcacgggtggaaagtcta 236  Q
    |||||||| ||||||||| |||||||||||    
T  45977021 acccgtgcagcagcacggatggaaagtcta 45976992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 151; E-Value: 8e-80
Query Start/End: Original strand, 8 - 238
Target Start/End: Complemental strand, 39058588 - 39058357
Alignment:
Q  8 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgag 107  Q
    |||| ||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||       |||||||||| ||||| ||||||    
T  39058588 ccaataatataacattgacatataattttaacaaaagaatgaagtaacacatgattgataaaaattaatatttttaaggtgaataagtgtggtatctgag 39058489  T
Q  108 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgt-tactatatctacaatgtatatg 206  Q
    ||||||||||||||||||  |||||||||||||||||||||||||||||||||||||  ||| | |||||||||||| ||||||||||||||||||||||    
T  39058488 gttcgaattccaacatcttgatatatttgggaccacatatttcattctctttgatatatattaaaatttgtttttgtctactatatctacaatgtatatg 39058389  T
Q  207 acccgtgcggcagcacgggtggaaagtctagt 238  Q
    |||||||||||||||| |||||||| ||||||    
T  39058388 acccgtgcggcagcacaggtggaaaatctagt 39058357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 136; E-Value: 7e-71
Query Start/End: Original strand, 8 - 215
Target Start/End: Complemental strand, 31628718 - 31628510
Alignment:
Q  8 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgag 107  Q
    |||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||       | |||||||| ||||||| ||||    
T  31628718 ccaataatataacattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaaataatatttttaagatgaataagtgtggtgtatgag 31628619  T
Q  108 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgt-tactatatctacaatgtatatg 206  Q
    ||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||| ||||||||| ||| | ||||||||||||||||    
T  31628618 gttcgaattccaacatctgcatatatttgagaccacatatttaattctctttgatatgcattgagatatgtttttgtctacaacatctacaatgtatatg 31628519  T
Q  207 acccgtgcg 215  Q
    |||||||||    
T  31628518 acccgtgcg 31628510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 136; E-Value: 7e-71
Query Start/End: Original strand, 8 - 214
Target Start/End: Complemental strand, 52098422 - 52098214
Alignment:
Q  8 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaatt-aatannnnnnnggtgaataagcgtggtgtctga 106  Q
    |||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||       |||||||||| || ||||||||    
T  52098422 ccaataatataacattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaatttaatatttttaaggtgaataagtgttgtgtctga 52098323  T
Q  107 ggttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgt-tactatatctacaatgtatat 205  Q
     ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||| |||| |||||||    
T  52098322 agtttgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttatttttgtctactatatttacagtgtatat 52098223  T
Q  206 gacccgtgc 214  Q
    |||||||||    
T  52098222 gacccgtgc 52098214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 8 - 236
Target Start/End: Original strand, 54624955 - 54625177
Alignment:
Q  8 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgag 107  Q
    |||| ||||||| |||||||||||||||||||||| |||||||||||||      |||||||||||||||       |||||||||| ||||||||||||    
T  54624955 ccaataatataacattgacatataattttaacaaa-gaatgaagtaaca------tgataaaaattaatatttttaaggtgaataagtgtggtgtctgag 54625047  T
Q  108 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgt-tactatatctacaatgtatatg 206  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||  ||||||||||||||     
T  54625048 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattaagatttgtttttgtctactacgtctacaatgtatata 54625147  T
Q  207 acccgtgcggcagcacgggtggaaagtcta 236  Q
    ||||||||| || |||  ||||||| ||||    
T  54625148 acccgtgcgacatcacatgtggaaaatcta 54625177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 8 - 184
Target Start/End: Complemental strand, 45782660 - 45782484
Alignment:
Q  8 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgag 107  Q
    |||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||       |||||||||| ||||||||||||    
T  45782660 ccaataatataacattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctgag 45782561  T
Q  108 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgt 184  Q
    |||| ||||||||||||| ||||||||| ||||||||||||||||||||||||||||  |||||||||| |||||||    
T  45782560 gttcaaattccaacatcttcatatatttaggaccacatatttcattctctttgatatatattgagatttatttttgt 45782484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 13 - 177
Target Start/End: Complemental strand, 50229933 - 50229768
Alignment:
Q  13 aatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaa-ttaatannnnnnnggtgaataagcgtggtgtctgaggttc 111  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||       ||||||||||  |||||||||||||||    
T  50229933 aatataacattgacatataattttaacaaaagaatgaagtaacacactattgataaaaaattaatatttttaaggtgaataagtatggtgtctgaggttc 50229834  T
Q  112 gaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttg 177  Q
    |||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||    
T  50229833 gaattccaacatctgcatatattttggaccacatgtttcattctctttgatatgcattgagatttg 50229768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 197 - 238
Target Start/End: Original strand, 18209699 - 18209740
Alignment:
Q  197 aatgtatatgacccgtgcggcagcacgggtggaaagtctagt 238  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  18209699 aatgtatatgacccgtgcggcagcacgggtggaaagtctagt 18209740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 145 - 198
Target Start/End: Complemental strand, 50229766 - 50229712
Alignment:
Q  145 tatttcattctctttgatatgcattgagatttgtttttgt-tactatatctacaa 198  Q
    |||||||||||||||||||||||||||||||| ||||||| ||||| ||||||||    
T  50229766 tatttcattctctttgatatgcattgagatttttttttgtctactacatctacaa 50229712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 85 - 132
Target Start/End: Complemental strand, 34684650 - 34684603
Alignment:
Q  85 ggtgaataagcgtggtgtctgaggttcgaattccaacatctgcatata 132  Q
    |||||||||| | |||||||||||||||||||||||| ||||||||||    
T  34684650 ggtgaataagtggggtgtctgaggttcgaattccaacctctgcatata 34684603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 197 - 228
Target Start/End: Original strand, 11238181 - 11238212
Alignment:
Q  197 aatgtatatgacccgtgcggcagcacgggtgg 228  Q
    ||||||||||||||||||||||||||||||||    
T  11238181 aatgtatatgacccgtgcggcagcacgggtgg 11238212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 13 - 56
Target Start/End: Complemental strand, 12090773 - 12090730
Alignment:
Q  13 aatataatattgacatataattttaacaaaagaatgaagtaaca 56  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  12090773 aatataacattaacatataatttttacaaaagaatgaagtaaca 12090730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 13 - 56
Target Start/End: Complemental strand, 16905261 - 16905218
Alignment:
Q  13 aatataatattgacatataattttaacaaaagaatgaagtaaca 56  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  16905261 aatataacattaacatataatttttacaaaagaatgaagtaaca 16905218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 13 - 56
Target Start/End: Complemental strand, 16918201 - 16918158
Alignment:
Q  13 aatataatattgacatataattttaacaaaagaatgaagtaaca 56  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  16918201 aatataacattaacatataatttttacaaaagaatgaagtaaca 16918158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 196 - 239
Target Start/End: Complemental strand, 18258255 - 18258212
Alignment:
Q  196 caatgtatatgacccgtgcggcagcacgggtggaaagtctagta 239  Q
    ||||||||||||||||||||||||||||| | || |||||||||    
T  18258255 caatgtatatgacccgtgcggcagcacggatagacagtctagta 18258212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 194 - 229
Target Start/End: Original strand, 19745243 - 19745278
Alignment:
Q  194 tacaatgtatatgacccgtgcggcagcacgggtgga 229  Q
    |||||||||||||||||||||||| |||||||||||    
T  19745243 tacaatgtatatgacccgtgcggccgcacgggtgga 19745278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 194 - 229
Target Start/End: Complemental strand, 19794563 - 19794528
Alignment:
Q  194 tacaatgtatatgacccgtgcggcagcacgggtgga 229  Q
    |||||||||||||||||||||||| |||||||||||    
T  19794563 tacaatgtatatgacccgtgcggccgcacgggtgga 19794528  T

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Target: chr4; HSP #34
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 196 - 243
Target Start/End: Complemental strand, 22289997 - 22289950
Alignment:
Q  196 caatgtatatgacccgtgcggcagcacgggtggaaagtctagtaaata 243  Q
    ||||||||||||| |||||||||||||||||| || ||||||| ||||    
T  22289997 caatgtatatgactcgtgcggcagcacgggtgcaaggtctagttaata 22289950  T

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Target: chr4; HSP #35
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 194 - 229
Target Start/End: Complemental strand, 23976750 - 23976715
Alignment:
Q  194 tacaatgtatatgacccgtgcggcagcacgggtgga 229  Q
    |||||| |||||||||||||||||||||||||||||    
T  23976750 tacaatatatatgacccgtgcggcagcacgggtgga 23976715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 199 - 238
Target Start/End: Original strand, 26724134 - 26724173
Alignment:
Q  199 tgtatatgacccgtgcggcagcacgggtggaaagtctagt 238  Q
    ||||||| ||||||||||||||||||||| ||||||||||    
T  26724134 tgtatataacccgtgcggcagcacgggtgaaaagtctagt 26724173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 13 - 56
Target Start/End: Complemental strand, 30825235 - 30825192
Alignment:
Q  13 aatataatattgacatataattttaacaaaagaatgaagtaaca 56  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  30825235 aatataacattaacatataatttttacaaaagaatgaagtaaca 30825192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 13 - 56
Target Start/End: Complemental strand, 31966282 - 31966239
Alignment:
Q  13 aatataatattgacatataattttaacaaaagaatgaagtaaca 56  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  31966282 aatataacattaacatataatttttacaaaagaatgaagtaaca 31966239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 13 - 56
Target Start/End: Complemental strand, 39058665 - 39058622
Alignment:
Q  13 aatataatattgacatataattttaacaaaagaatgaagtaaca 56  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  39058665 aatataacattaacatataatttttacaaaagaatgaagtaaca 39058622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 13 - 56
Target Start/End: Complemental strand, 45977307 - 45977264
Alignment:
Q  13 aatataatattgacatataattttaacaaaagaatgaagtaaca 56  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  45977307 aatataacattaacatataatttttacaaaagaatgaagtaaca 45977264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 13 - 56
Target Start/End: Complemental strand, 47143113 - 47143070
Alignment:
Q  13 aatataatattgacatataattttaacaaaagaatgaagtaaca 56  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  47143113 aatataacattaacatataatttttacaaaagaatgaagtaaca 47143070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 13 - 56
Target Start/End: Complemental strand, 48118845 - 48118802
Alignment:
Q  13 aatataatattgacatataattttaacaaaagaatgaagtaaca 56  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  48118845 aatataacattaacatataatttttacaaaagaatgaagtaaca 48118802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 13 - 56
Target Start/End: Complemental strand, 52098503 - 52098460
Alignment:
Q  13 aatataatattgacatataattttaacaaaagaatgaagtaaca 56  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  52098503 aatataacattaacatataatttttacaaaagaatgaagtaaca 52098460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 13 - 56
Target Start/End: Original strand, 52434540 - 52434583
Alignment:
Q  13 aatataatattgacatataattttaacaaaagaatgaagtaaca 56  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  52434540 aatataacattaacatataatttttacaaaagaatgaagtaaca 52434583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 13 - 56
Target Start/End: Complemental strand, 53143577 - 53143534
Alignment:
Q  13 aatataatattgacatataattttaacaaaagaatgaagtaaca 56  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  53143577 aatataacattaacatataatttttacaaaagaatgaagtaaca 53143534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 13 - 56
Target Start/End: Original strand, 54624879 - 54624922
Alignment:
Q  13 aatataatattgacatataattttaacaaaagaatgaagtaaca 56  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  54624879 aatataacattaacatataatttttacaaaagaatgaagtaaca 54624922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 202 - 238
Target Start/End: Complemental strand, 8371116 - 8371080
Alignment:
Q  202 atatgacccgtgcggcagcacgggtggaaagtctagt 238  Q
    |||||||||||||||||||||||||| || |||||||    
T  8371116 atatgacccgtgcggcagcacgggtgcaaggtctagt 8371080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 13 - 53
Target Start/End: Complemental strand, 50230019 - 50229979
Alignment:
Q  13 aatataatattgacatataattttaacaaaagaatgaagta 53  Q
    ||||||| ||| |||||||||||| ||||||||||||||||    
T  50230019 aatataacattaacatataatttttacaaaagaatgaagta 50229979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 173; Significance: 6e-93; HSPs: 2)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 173; E-Value: 6e-93
Query Start/End: Original strand, 8 - 240
Target Start/End: Complemental strand, 149281 - 149048
Alignment:
Q  8 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgag 107  Q
    |||| |||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||       |||||||||| || |||| |||     
T  149281 ccaataatataacgttgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatatttttaaggtgaataagtgttgtgtttgat 149182  T
Q  108 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgt-tactatatctacaatgtatatg 206  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||    
T  149181 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtctactatatctacaatttatatg 149082  T
Q  207 acccgtgcggcagcacgggtggaaagtctagtaa 240  Q
    ||||||||||||||||||||||||||||||||||    
T  149081 acccgtgcggcagcacgggtggaaagtctagtaa 149048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #2
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 13 - 56
Target Start/End: Complemental strand, 149361 - 149318
Alignment:
Q  13 aatataatattgacatataattttaacaaaagaatgaagtaaca 56  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  149361 aatataacattaacatataatttttacaaaagaatgaagtaaca 149318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0173 (Bit Score: 163; Significance: 6e-87; HSPs: 1)
Name: scaffold0173
Description:

Target: scaffold0173; HSP #1
Raw Score: 163; E-Value: 6e-87
Query Start/End: Original strand, 8 - 238
Target Start/End: Original strand, 19345 - 19576
Alignment:
Q  8 ccaagaatataatattgacatataattttaacaaaagaatgaagtaacacacgattgataaaaattaatannnnnnnggtgaataagcgtggtgtctgag 107  Q
    |||| ||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||       |||||||||| ||||||||||||    
T  19345 ccaataatataacattgacatataattttaacaaaagaatgaagtaagacacgattgataaaaattaatatttttaaggtgaataagtgtggtgtctgag 19444  T
Q  108 gttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgt-tactatatctacaatgtatatg 206  Q
    |||||||||||||||||||||||||||||||||||||||||| ||| ||||| |||||||||||||||||||||||| ||||| |||||||||||||| |    
T  19445 gttcgaattccaacatctgcatatatttgggaccacatatttaattatctttaatatgcattgagatttgtttttgtctactacatctacaatgtatagg 19544  T
Q  207 acccgtgcggcagcacgggtggaaagtctagt 238  Q
    |||||| |||||||||||||||||||||||||    
T  19545 acccgtacggcagcacgggtggaaagtctagt 19576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0836 (Bit Score: 139; Significance: 1e-72; HSPs: 1)
Name: scaffold0836
Description:

Target: scaffold0836; HSP #1
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 87 - 248
Target Start/End: Complemental strand, 5430 - 5268
Alignment:
Q  87 tgaataagcgtggtgtctgaggttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgt-t 185  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  5430 tgaataagcgtggtgtctgaggttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgtct 5331  T
Q  186 actatatctacaatgtatatgacccgtgcggcagcacgggtggaaagtctagtaaatatgaat 248  Q
    | ||||||||||||||||||| ||||||||||||||||||||||||||||||| | |||||||    
T  5330 attatatctacaatgtatatgtcccgtgcggcagcacgggtggaaagtctagtgagtatgaat 5268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0515 (Bit Score: 117; Significance: 2e-59; HSPs: 1)
Name: scaffold0515
Description:

Target: scaffold0515; HSP #1
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 87 - 238
Target Start/End: Complemental strand, 6213 - 6061
Alignment:
Q  87 tgaataagcgtggtgtctgaggttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgt-t 185  Q
    |||||||| ||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||| |    
T  6213 tgaataagtgtggtgtttgaggttcgaattccaacatctgcatatatttgagaccacatatttcattctctttgatatgcattgagatatgtttttgtct 6114  T
Q  186 actatatctacaatgtatatgacccgtgcggcagcacgggtggaaagtctagt 238  Q
    || | ||||||||||||||||||||||||||||||||||||||||| ||||||    
T  6113 acaacatctacaatgtatatgacccgtgcggcagcacgggtggaaaatctagt 6061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0306 (Bit Score: 117; Significance: 2e-59; HSPs: 1)
Name: scaffold0306
Description:

Target: scaffold0306; HSP #1
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 87 - 238
Target Start/End: Complemental strand, 6223 - 6071
Alignment:
Q  87 tgaataagcgtggtgtctgaggttcgaattccaacatctgcatatatttgggaccacatatttcattctctttgatatgcattgagatttgtttttgt-t 185  Q
    |||||||| ||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||| |    
T  6223 tgaataagtgtggtgtttgaggttcgaattccaacatctgcatatatttgagaccacatatttcattctctttgatatgcattgagatatgtttttgtct 6124  T
Q  186 actatatctacaatgtatatgacccgtgcggcagcacgggtggaaagtctagt 238  Q
    || | ||||||||||||||||||||||||||||||||||||||||| ||||||    
T  6123 acaacatctacaatgtatatgacccgtgcggcagcacgggtggaaaatctagt 6071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0896 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0896
Description:

Target: scaffold0896; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 194 - 229
Target Start/End: Original strand, 1102 - 1137
Alignment:
Q  194 tacaatgtatatgacccgtgcggcagcacgggtgga 229  Q
    ||||||||||||||||||||||||||||||||||||    
T  1102 tacaatgtatatgacccgtgcggcagcacgggtgga 1137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0316 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0316
Description:

Target: scaffold0316; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 196 - 241
Target Start/End: Original strand, 14730 - 14774
Alignment:
Q  196 caatgtatatgacccgtgcggcagcacgggtggaaagtctagtaaa 241  Q
    ||||||||||||||||||||||| ||||||||| ||||||||||||    
T  14730 caatgtatatgacccgtgcggcaacacgggtgg-aagtctagtaaa 14774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1234 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold1234
Description:

Target: scaffold1234; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 202 - 238
Target Start/End: Original strand, 1047 - 1083
Alignment:
Q  202 atatgacccgtgcggcagcacgggtggaaagtctagt 238  Q
    |||||||||||||||||||||||||| || |||||||    
T  1047 atatgacccgtgcggcagcacgggtgcaaggtctagt 1083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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