View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

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 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF5911_high_22 (Length: 308)

Name: NF5911_high_22
Description: NF5911
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF5911_high_22
NF5911_high_22
[»] chr8 (1 HSPs)
chr8 (2-303)||(2892657-2892954)


Alignment Details
Target: chr8 (Bit Score: 265; Significance: 1e-148; HSPs: 1)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 265; E-Value: 1e-148
Query Start/End: Original strand, 2 - 303
Target Start/End: Original strand, 2892657 - 2892954
Alignment:
Q  2 tgtgatactggatactttcaatacaacaaaacaaggaattaacatgttcaatcaaattcgactctaattattcatacttgtcttaaacatataagtacaa 101  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2892657 tgtgatactggatactttcaataaaacaaaacaaggaattaacatgttcaatcaaattcgactctaattattcatacttgtcttaaacatataagtacaa 2892756  T
Q  102 ggtacataaccagaatacaacatagttcttcacaatggataatcaaaacacatgtcttaatcattaaggacataatatgattatgatatatagggagcta 201  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2892757 ggtacataaccagaatacaacatagttcttcacaatggataatcaaaacacatgtcttaatcattaaggacataatatgattatgatatatagggagcta 2892856  T
Q  202 catgataactcatatcagtcaacaaacatgaaatttcatgagataaaacataagacacaactaagcttcaactaaatggccttctctttcccctttgcta 301  Q
    ||||||||||||||||||||    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||| |||| ||    
T  2892857 catgataactcatatcagtc----aacatgaaatttcatgagataaaacataagacacaactaagcttcaagtaaatggccttctccttcccttttgata 2892952  T

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