View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5911_high_54 (Length: 214)
Name: NF5911_high_54
Description: NF5911
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5911_high_54 |
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Alignment Details
Target: chr8 (Bit Score: 173; Significance: 3e-93; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 173; E-Value: 3e-93
Query Start/End: Original strand, 13 - 197
Target Start/End: Complemental strand, 27840163 - 27839979
Alignment:
| Q |
13 |
aatatagtatgaattatgtatatgcattatgcttttaatgttcgtatagtataatcttctgaattcaattaaagttatgtttctcctgtttttgtttgtc |
112 |
Q |
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| T |
27840163 |
aatatagtatgaattatgtatatgcattatgcttttaatgttcgtatagtataatcttctgaattcaattaaagttatgtttctcctgttcttgtttgtc |
27840064 |
T |
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| Q |
113 |
catattataaggtatacattattgcttaattaagtgtcatgataggaaatgtctttcaaaaaagacatgaaagaagccaactata |
197 |
Q |
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| T |
27840063 |
catattataaagtatacattattgcttaattaagtgtcatgataggaaatgtctttcaaaaaagacatgaaagaagccaattata |
27839979 |
T |
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