View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5911_low_37 (Length: 251)
Name: NF5911_low_37
Description: NF5911
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5911_low_37 |
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Alignment Details
Target: chr8 (Bit Score: 218; Significance: 1e-120; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 218; E-Value: 1e-120
Query Start/End: Original strand, 1 - 240
Target Start/End: Original strand, 27522254 - 27522490
Alignment:
| Q |
1 |
gtaaatgtgacataatttaataattaataatgcatatgttatagaaatgttacccaccccatgttcaaagttggaagttgctgctgtagtaagtaatttg |
100 |
Q |
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||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
27522254 |
gtaaatgtgacataatttaat---taataatgcataggttatagaaatgttacccaccccatgttcaaagttggaagttgctgctgtagtaagtaatttg |
27522350 |
T |
|
| Q |
101 |
gattaactccatgatggtttgggtgctcccattgtgcctgctgctgagctgcaatcttttccttctccttgatctataattatttttgaaaatgtgtcat |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
27522351 |
gattaactccatgatggtttgggtgctcccattgtgcctgctgctgagctgcaatcttttccttctccttgatctataattatttttgaaaatgtgtcat |
27522450 |
T |
|
| Q |
201 |
ggaaaataataaagaatcttagccttgattaattattcat |
240 |
Q |
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|||||| ||||||||||||||||||||||||||||||||| |
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| T |
27522451 |
ggaaaacaataaagaatcttagccttgattaattattcat |
27522490 |
T |
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