View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF5911_low_39 (Length: 250)

Name: NF5911_low_39
Description: NF5911
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF5911_low_39
NF5911_low_39
[»] chr4 (32 HSPs)
chr4 (1-209)||(30996577-30996785)
chr4 (91-172)||(318697-318778)
chr4 (76-139)||(48953076-48953139)
chr4 (76-139)||(50792406-50792469)
chr4 (76-165)||(43940111-43940200)
chr4 (88-139)||(31997878-31997929)
chr4 (76-139)||(10658873-10658936)
chr4 (76-139)||(10873018-10873081)
chr4 (76-139)||(19912719-19912782)
chr4 (76-139)||(26923529-26923592)
chr4 (76-139)||(30411242-30411305)
chr4 (91-138)||(38005592-38005639)
chr4 (76-139)||(50790870-50790933)
chr4 (77-139)||(28459658-28459720)
chr4 (77-139)||(43590580-43590642)
chr4 (134-171)||(24152670-24152707)
chr4 (91-143)||(2390275-2390327)
chr4 (76-144)||(45549694-45549762)
chr4 (76-139)||(49646071-49646132)
chr4 (76-139)||(202336-202399)
chr4 (76-139)||(1771830-1771893)
chr4 (76-139)||(19870006-19870069)
chr4 (126-169)||(40674743-40674786)
chr4 (76-139)||(55610709-55610772)
chr4 (75-133)||(7113500-7113558)
chr4 (77-138)||(27531877-27531939)
chr4 (134-172)||(39840263-39840301)
chr4 (97-139)||(51924072-51924114)
chr4 (99-139)||(19870986-19871026)
chr4 (91-139)||(30653544-30653592)
chr4 (208-236)||(31004240-31004268)
chr4 (107-139)||(31624419-31624451)
[»] chr3 (25 HSPs)
chr3 (76-168)||(43359292-43359384)
chr3 (76-139)||(48072022-48072085)
chr3 (77-139)||(42167323-42167385)
chr3 (97-171)||(49918249-49918323)
chr3 (75-139)||(7041776-7041840)
chr3 (76-143)||(46668383-46668450)
chr3 (77-139)||(41888855-41888916)
chr3 (76-139)||(50935759-50935822)
chr3 (77-139)||(32390105-32390167)
chr3 (77-139)||(43860772-43860834)
chr3 (91-139)||(36806968-36807016)
chr3 (76-136)||(44896056-44896116)
chr3 (91-139)||(46115034-46115082)
chr3 (76-139)||(32111550-32111613)
chr3 (76-139)||(40374498-40374561)
chr3 (97-139)||(22978125-22978167)
chr3 (90-139)||(39534945-39534994)
chr3 (99-139)||(34785891-34785931)
chr3 (125-168)||(2557962-2558004)
chr3 (76-139)||(6586311-6586374)
chr3 (76-139)||(40980130-40980193)
chr3 (97-139)||(5505978-5506020)
chr3 (97-139)||(50938248-50938290)
chr3 (97-138)||(41889432-41889473)
chr3 (134-174)||(19274721-19274761)
[»] chr6 (14 HSPs)
chr6 (77-139)||(34574586-34574648)
chr6 (76-139)||(24159284-24159346)
chr6 (76-139)||(31603902-31603965)
chr6 (77-139)||(15508395-15508457)
chr6 (97-138)||(5956469-5956510)
chr6 (87-139)||(1290428-1290480)
chr6 (76-144)||(31259538-31259606)
chr6 (76-139)||(5090074-5090137)
chr6 (76-139)||(18368724-18368787)
chr6 (76-138)||(190970-191032)
chr6 (91-143)||(18801742-18801794)
chr6 (76-139)||(1789833-1789896)
chr6 (76-139)||(4976570-4976633)
chr6 (96-143)||(34803937-34803984)
[»] chr5 (12 HSPs)
chr5 (91-165)||(7948443-7948517)
chr5 (97-165)||(41356241-41356309)
chr5 (76-139)||(20017296-20017359)
chr5 (77-139)||(20768859-20768921)
chr5 (76-139)||(3078531-3078594)
chr5 (76-139)||(4559470-4559533)
chr5 (76-139)||(8520613-8520676)
chr5 (96-139)||(11575668-11575711)
chr5 (76-139)||(13019040-13019103)
chr5 (114-165)||(37256157-37256208)
chr5 (97-139)||(15524408-15524450)
chr5 (134-172)||(36959459-36959497)
[»] chr7 (30 HSPs)
chr7 (76-141)||(27906435-27906500)
chr7 (76-139)||(31030754-31030817)
chr7 (76-139)||(33982305-33982368)
chr7 (76-168)||(38224639-38224734)
chr7 (76-139)||(43544886-43544949)
chr7 (78-136)||(42833716-42833774)
chr7 (90-139)||(3117304-3117353)
chr7 (98-139)||(36121477-36121518)
chr7 (76-141)||(44104566-44104631)
chr7 (91-139)||(8932505-8932553)
chr7 (76-139)||(1601970-1602033)
chr7 (76-139)||(9806579-9806642)
chr7 (76-143)||(31436237-31436304)
chr7 (76-143)||(31969456-31969523)
chr7 (76-139)||(33979662-33979725)
chr7 (76-139)||(37658105-37658168)
chr7 (76-143)||(42825897-42825964)
chr7 (77-139)||(39870012-39870074)
chr7 (77-139)||(41406234-41406296)
chr7 (75-139)||(40061209-40061273)
chr7 (76-139)||(596102-596165)
chr7 (76-139)||(30582717-30582780)
chr7 (76-139)||(31619551-31619614)
chr7 (76-139)||(35670344-35670407)
chr7 (134-168)||(43544964-43544998)
chr7 (87-139)||(585890-585943)
chr7 (134-174)||(28958190-28958230)
chr7 (76-139)||(37708080-37708144)
chr7 (91-139)||(43468015-43468063)
chr7 (78-138)||(46615782-46615841)
[»] chr2 (25 HSPs)
chr2 (76-139)||(37240995-37241058)
chr2 (76-165)||(18246691-18246784)
chr2 (8-56)||(37241440-37241488)
chr2 (76-143)||(1086085-1086152)
chr2 (76-139)||(14452346-14452409)
chr2 (76-139)||(33179007-33179070)
chr2 (76-139)||(36600983-36601046)
chr2 (76-139)||(40862194-40862257)
chr2 (97-139)||(33182580-33182622)
chr2 (91-139)||(18109720-18109768)
chr2 (76-136)||(36602722-36602782)
chr2 (76-131)||(6322130-6322185)
chr2 (91-138)||(7183287-7183334)
chr2 (76-139)||(11447286-11447349)
chr2 (76-139)||(26340024-26340087)
chr2 (96-139)||(38928500-38928543)
chr2 (76-139)||(39532108-39532171)
chr2 (76-139)||(44525977-44526040)
chr2 (90-144)||(15265345-15265399)
chr2 (134-171)||(1086037-1086074)
chr2 (133-170)||(8341222-8341259)
chr2 (133-174)||(26340101-26340142)
chr2 (91-143)||(240539-240591)
chr2 (97-137)||(7454523-7454563)
chr2 (134-174)||(10361384-10361424)
[»] chr1 (23 HSPs)
chr1 (78-139)||(44299936-44299997)
chr1 (76-143)||(9223882-9223949)
chr1 (76-139)||(5698172-5698235)
chr1 (98-140)||(44502606-44502648)
chr1 (90-139)||(11756876-11756925)
chr1 (76-143)||(5698550-5698616)
chr1 (76-139)||(14390468-14390531)
chr1 (76-139)||(18545587-18545650)
chr1 (76-139)||(38667237-38667300)
chr1 (77-139)||(23259131-23259192)
chr1 (76-130)||(42159667-42159721)
chr1 (77-139)||(43847420-43847482)
chr1 (97-139)||(44109943-44109985)
chr1 (91-139)||(31496656-31496704)
chr1 (91-139)||(35179866-35179914)
chr1 (134-173)||(9223832-9223871)
chr1 (76-139)||(31656415-31656478)
chr1 (76-139)||(39325507-39325570)
chr1 (76-139)||(42628208-42628271)
chr1 (97-139)||(3795975-3796017)
chr1 (97-139)||(4361071-4361113)
chr1 (134-175)||(14390412-14390453)
chr1 (97-142)||(18039995-18040040)
[»] chr8 (26 HSPs)
chr8 (76-138)||(31642739-31642801)
chr8 (75-140)||(19142911-19142976)
chr8 (75-144)||(34617703-34617772)
chr8 (76-139)||(35019533-35019596)
chr8 (88-139)||(35253032-35253083)
chr8 (124-167)||(44336169-44336212)
chr8 (75-137)||(25133258-25133320)
chr8 (78-139)||(38760803-38760863)
chr8 (76-139)||(18146388-18146451)
chr8 (76-143)||(40532099-40532166)
chr8 (76-139)||(43150298-43150361)
chr8 (124-167)||(44338763-44338806)
chr8 (76-139)||(45069809-45069872)
chr8 (76-139)||(45237783-45237846)
chr8 (80-138)||(38364465-38364523)
chr8 (91-143)||(29051178-29051230)
chr8 (75-139)||(43874004-43874068)
chr8 (133-172)||(4601037-4601076)
chr8 (76-139)||(12208852-12208915)
chr8 (76-139)||(12453280-12453343)
chr8 (91-142)||(26020196-26020247)
chr8 (76-139)||(39104168-39104231)
chr8 (76-138)||(4477609-4477671)
chr8 (106-139)||(29725787-29725820)
chr8 (134-171)||(35253098-35253135)
chr8 (91-139)||(41356336-41356384)
[»] scaffold0009 (1 HSPs)
scaffold0009 (76-139)||(94394-94457)
[»] scaffold0115 (4 HSPs)
scaffold0115 (77-139)||(4195-4257)
scaffold0115 (77-139)||(11935-11997)
scaffold0115 (134-174)||(4140-4180)
scaffold0115 (134-174)||(11880-11920)
[»] scaffold0076 (1 HSPs)
scaffold0076 (134-170)||(14259-14295)


Alignment Details
Target: chr4 (Bit Score: 197; Significance: 1e-107; HSPs: 32)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 1 - 209
Target Start/End: Original strand, 30996577 - 30996785
Alignment:
Q  1 atttttattttaaagaatataaaacaaaggcatgttactaatagttcatataataaataattttgttttatcaaactataagctagttgaaaaaactttt 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30996577 atttttattttaaagaatataaaacaaaggcatgttactaatagttcatataataaataattttgttttatcaaactataagctagttgaaaaaactttt 30996676  T
Q  101 tatcaaacacatcttattctatcaaaacaagcttataagttagcttatttgtgttaccaaacacaacctaaatgagagctaaccaaaatgtttgtttttt 200  Q
    |||||||||||||||||||||||||||||| |||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30996677 tatcaaacacatcttattctatcaaaacaaacttataaactagcttatttgtgttaccaaacacaacctaaatgagagctaaccaaaatgtttgtttttt 30996776  T
Q  201 agcctcata 209  Q
    |||||||||    
T  30996777 agcctcata 30996785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 91 - 172
Target Start/End: Original strand, 318697 - 318778
Alignment:
Q  91 aaaaactttttatcaaacacatcttattctatcaaaacaagcttataagttagcttatttgtgttaccaaacacaacctaaa 172  Q
    |||| ||||||| ||||||| ||| ||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  318697 aaaagctttttaccaaacacgtctcattttatcaaaacaagcttataagctagcttatttgtgttaccaaacacaacctaaa 318778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 76 - 139
Target Start/End: Complemental strand, 48953139 - 48953076
Alignment:
Q  76 ctataagctagttgaaaaaactttttatcaaacacatcttattctatcaaaacaagcttataag 139  Q
    ||||||||||||  ||||||||||||| ||||||||||||||| ||||||||||||||||||||    
T  48953139 ctataagctagtgaaaaaaactttttaccaaacacatcttattatatcaaaacaagcttataag 48953076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 76 - 139
Target Start/End: Original strand, 50792406 - 50792469
Alignment:
Q  76 ctataagctagttgaaaaaactttttatcaaacacatcttattctatcaaaacaagcttataag 139  Q
    ||||||||||||  ||||||||||||| ||||||||||||||| ||||||||||||||||||||    
T  50792406 ctataagctagtgaaaaaaactttttaccaaacacatcttattatatcaaaacaagcttataag 50792469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 76 - 165
Target Start/End: Original strand, 43940111 - 43940200
Alignment:
Q  76 ctataagctagttgaaaaaactttttatcaaacacatcttattctatcaaaacaagcttataagttagcttatttgtgttaccaaacaca 165  Q
    ||||||||||||  ||||| ||||||  ||||||||||||||| |||||| ||||| ||||||  ||||||||| |||||||||||||||    
T  43940111 ctataagctagtgaaaaaagctttttgccaaacacatcttattatatcaatacaaggttataaactagcttattcgtgttaccaaacaca 43940200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 88 - 139
Target Start/End: Complemental strand, 31997929 - 31997878
Alignment:
Q  88 tgaaaaaactttttatcaaacacatcttattctatcaaaacaagcttataag 139  Q
    ||||||||||||||||||||||||||  ||||||||||||||||||||||||    
T  31997929 tgaaaaaactttttatcaaacacatcacattctatcaaaacaagcttataag 31997878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 76 - 139
Target Start/End: Original strand, 10658873 - 10658936
Alignment:
Q  76 ctataagctagttgaaaaaactttttatcaaacacatcttattctatcaaaacaagcttataag 139  Q
    ||||||||||||  ||||| ||||||| ||||| ||||||||| ||||||||||||||||||||    
T  10658873 ctataagctagtgaaaaaagctttttaccaaacgcatcttattatatcaaaacaagcttataag 10658936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 76 - 139
Target Start/End: Original strand, 10873018 - 10873081
Alignment:
Q  76 ctataagctagttgaaaaaactttttatcaaacacatcttattctatcaaaacaagcttataag 139  Q
    ||||||||||||  ||||| ||||||| ||||| ||||||||| ||||||||||||||||||||    
T  10873018 ctataagctagtgaaaaaagctttttaccaaacgcatcttattatatcaaaacaagcttataag 10873081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 76 - 139
Target Start/End: Complemental strand, 19912782 - 19912719
Alignment:
Q  76 ctataagctagttgaaaaaactttttatcaaacacatcttattctatcaaaacaagcttataag 139  Q
    ||||||||||||   |||||||||||| ||||||||||| ||| ||||||||||||||||||||    
T  19912782 ctataagctagtgagaaaaactttttaccaaacacatctcattttatcaaaacaagcttataag 19912719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 76 - 139
Target Start/End: Original strand, 26923529 - 26923592
Alignment:
Q  76 ctataagctagttgaaaaaactttttatcaaacacatcttattctatcaaaacaagcttataag 139  Q
    ||||||||||||   |||| ||||||| ||||||||||| ||||||||||||| ||||||||||    
T  26923529 ctataagctagtgagaaaagctttttaccaaacacatctcattctatcaaaactagcttataag 26923592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 76 - 139
Target Start/End: Original strand, 30411242 - 30411305
Alignment:
Q  76 ctataagctagttgaaaaaactttttatcaaacacatcttattctatcaaaacaagcttataag 139  Q
    ||||||||||||   |||| ||||||| ||||||||||| ||| ||||||||||||||||||||    
T  30411242 ctataagctagtgagaaaagctttttaccaaacacatctcattttatcaaaacaagcttataag 30411305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 91 - 138
Target Start/End: Complemental strand, 38005639 - 38005592
Alignment:
Q  91 aaaaactttttatcaaacacatcttattctatcaaaacaagcttataa 138  Q
    |||||||||||| ||||||||||| ||||||||||||||| |||||||    
T  38005639 aaaaactttttaccaaacacatctcattctatcaaaacaaacttataa 38005592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 76 - 139
Target Start/End: Complemental strand, 50790933 - 50790870
Alignment:
Q  76 ctataagctagttgaaaaaactttttatcaaacacatcttattctatcaaaacaagcttataag 139  Q
    |||||||||| |  ||||| ||||| | ||||||||||||||| ||||||||||||||||||||    
T  50790933 ctataagctaatgaaaaaagcttttcaccaaacacatcttattatatcaaaacaagcttataag 50790870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 77 - 139
Target Start/End: Complemental strand, 28459720 - 28459658
Alignment:
Q  77 tataagctagttgaaaaaactttttatcaaacacatcttattctatcaaaacaagcttataag 139  Q
    |||||||||||   |||| ||||||| ||||||||||| ||| ||||||||||||||||||||    
T  28459720 tataagctagtaagaaaagctttttaccaaacacatctcattttatcaaaacaagcttataag 28459658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 77 - 139
Target Start/End: Complemental strand, 43590642 - 43590580
Alignment:
Q  77 tataagctagttgaaaaaactttttatcaaacacatcttattctatcaaaacaagcttataag 139  Q
    |||||| ||||  ||||| ||||||| ||||||||||||||| ||||||||||| ||||||||    
T  43590642 tataaggtagtgaaaaaagctttttaccaaacacatcttattatatcaaaacaaacttataag 43590580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 134 - 171
Target Start/End: Complemental strand, 24152707 - 24152670
Alignment:
Q  134 tataagttagcttatttgtgttaccaaacacaacctaa 171  Q
    |||||| |||||||||||||||||||||||||||||||    
T  24152707 tataagctagcttatttgtgttaccaaacacaacctaa 24152670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 91 - 143
Target Start/End: Original strand, 2390275 - 2390327
Alignment:
Q  91 aaaaactttttatcaaacacatcttattctatcaaaacaagcttataagttag 143  Q
    |||||||||||| ||||||| ||| ||||| ||||||||| ||||||||||||    
T  2390275 aaaaactttttaccaaacacgtctcattctttcaaaacaaacttataagttag 2390327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 76 - 144
Target Start/End: Complemental strand, 45549762 - 45549694
Alignment:
Q  76 ctataagctagttgaaaaaactttttatcaaacacatcttattctatcaaaacaagcttataagttagc 144  Q
    ||||||||||||   |||| ||||||| ||||||||| | ||| |||||||||||||||||||| ||||    
T  45549762 ctataagctagtgagaaaagctttttaccaaacacatttcattttatcaaaacaagcttataagctagc 45549694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 76 - 139
Target Start/End: Complemental strand, 49646132 - 49646071
Alignment:
Q  76 ctataagctagttgaaaaaactttttatcaaacacatcttattctatcaaaacaagcttataag 139  Q
    ||||||||||||  ||||| ||||||| |||||||||  |||| ||||||||||||||||||||    
T  49646132 ctataagctagtgaaaaaagctttttaccaaacacat--tattatatcaaaacaagcttataag 49646071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 76 - 139
Target Start/End: Complemental strand, 202399 - 202336
Alignment:
Q  76 ctataagctagttgaaaaaactttttatcaaacacatcttattctatcaaaacaagcttataag 139  Q
    ||||||||||||   |||| ||||||| ||||||| ||||||| ||||||| ||||||||||||    
T  202399 ctataagctagtgagaaaagctttttaccaaacacgtcttattttatcaaagcaagcttataag 202336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 76 - 139
Target Start/End: Original strand, 1771830 - 1771893
Alignment:
Q  76 ctataagctagttgaaaaaactttttatcaaacacatcttattctatcaaaacaagcttataag 139  Q
    ||||||||||||   |||| ||||||| ||||||||||| ||| ||||||| ||||||||||||    
T  1771830 ctataagctagtgagaaaagctttttaccaaacacatctcattttatcaaagcaagcttataag 1771893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 76 - 139
Target Start/End: Complemental strand, 19870069 - 19870006
Alignment:
Q  76 ctataagctagttgaaaaaactttttatcaaacacatcttattctatcaaaacaagcttataag 139  Q
    ||||||||||||  ||||| | |||||  |||| ||||||||| ||||||||||||||||||||    
T  19870069 ctataagctagtgaaaaaagcattttactaaacgcatcttattatatcaaaacaagcttataag 19870006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 126 - 169
Target Start/End: Complemental strand, 40674786 - 40674743
Alignment:
Q  126 aacaagcttataagttagcttatttgtgttaccaaacacaacct 169  Q
    |||||||||||||| || ||| ||||||||||||||||||||||    
T  40674786 aacaagcttataagctaacttttttgtgttaccaaacacaacct 40674743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 76 - 139
Target Start/End: Complemental strand, 55610772 - 55610709
Alignment:
Q  76 ctataagctagttgaaaaaactttttatcaaacacatcttattctatcaaaacaagcttataag 139  Q
    ||||||||||||   ||||  |||||| ||||||||||| ||| ||||||||||||||||||||    
T  55610772 ctataagctagtgagaaaagttttttaccaaacacatctcattttatcaaaacaagcttataag 55610709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 75 - 133
Target Start/End: Original strand, 7113500 - 7113558
Alignment:
Q  75 actataagctagttgaaaaaactttttatcaaacacatcttattctatcaaaacaagct 133  Q
    |||||||||||||   |||| ||||||| ||||||||||| ||||||||||||| ||||    
T  7113500 actataagctagtgagaaaagctttttaccaaacacatctcattctatcaaaactagct 7113558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 77 - 138
Target Start/End: Complemental strand, 27531939 - 27531877
Alignment:
Q  77 tataagctagttgaaaaaacttttt-atcaaacacatcttattctatcaaaacaagcttataa 138  Q
    ||||||||| |  |||||||||||| | ||| |||||| ||||||||||||||||||||||||    
T  27531939 tataagctaatgaaaaaaacttttttaccaatcacatcgtattctatcaaaacaagcttataa 27531877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 134 - 172
Target Start/End: Original strand, 39840263 - 39840301
Alignment:
Q  134 tataagttagcttatttgtgttaccaaacacaacctaaa 172  Q
    |||||| |||||| |||||||||||||||||||||||||    
T  39840263 tataagctagcttttttgtgttaccaaacacaacctaaa 39840301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 97 - 139
Target Start/End: Complemental strand, 51924114 - 51924072
Alignment:
Q  97 tttttatcaaacacatcttattctatcaaaacaagcttataag 139  Q
    |||||| ||||||||||| ||| ||||||||||||||||||||    
T  51924114 tttttaccaaacacatctcattttatcaaaacaagcttataag 51924072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 99 - 139
Target Start/End: Original strand, 19870986 - 19871026
Alignment:
Q  99 tttatcaaacacatcttattctatcaaaacaagcttataag 139  Q
    |||| ||||||||||||||| |||||||||||| |||||||    
T  19870986 tttaccaaacacatcttattatatcaaaacaaggttataag 19871026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 91 - 139
Target Start/End: Complemental strand, 30653592 - 30653544
Alignment:
Q  91 aaaaactttttatcaaacacatcttattctatcaaaacaagcttataag 139  Q
    |||| ||||||| ||||||| ||| ||| ||||||||||||||||||||    
T  30653592 aaaagctttttaccaaacacgtctcattttatcaaaacaagcttataag 30653544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 208 - 236
Target Start/End: Original strand, 31004240 - 31004268
Alignment:
Q  208 tacaagtatggcaaaataccatgatgttg 236  Q
    |||||||||||||||||||||||||||||    
T  31004240 tacaagtatggcaaaataccatgatgttg 31004268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 107 - 139
Target Start/End: Original strand, 31624419 - 31624451
Alignment:
Q  107 acacatcttattctatcaaaacaagcttataag 139  Q
    |||||||||||| ||||||||||||||||||||    
T  31624419 acacatcttattatatcaaaacaagcttataag 31624451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 65; Significance: 1e-28; HSPs: 25)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 76 - 168
Target Start/End: Original strand, 43359292 - 43359384
Alignment:
Q  76 ctataagctagttgaaaaaactttttatcaaacacatcttattctatcaaaacaagcttataagttagcttatttgtgttaccaaacacaacc 168  Q
    ||||||||||||  ||||||||||||| |||||||| |||||| |||| ||||||||||||||| ||||||||||||||||||||||||||||    
T  43359292 ctataagctagtgaaaaaaactttttaccaaacacaacttattatatcgaaacaagcttataagctagcttatttgtgttaccaaacacaacc 43359384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 76 - 139
Target Start/End: Complemental strand, 48072085 - 48072022
Alignment:
Q  76 ctataagctagttgaaaaaactttttatcaaacacatcttattctatcaaaacaagcttataag 139  Q
    |||||||||||| |||||| ||||||| ||||||||||||||| ||||||||||||||||||||    
T  48072085 ctataagctagtggaaaaagctttttaccaaacacatcttattgtatcaaaacaagcttataag 48072022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 77 - 139
Target Start/End: Original strand, 42167323 - 42167385
Alignment:
Q  77 tataagctagttgaaaaaactttttatcaaacacatcttattctatcaaaacaagcttataag 139  Q
    |||||||||||  ||||||||||||| ||||||||||||||| ||||||||||||||||||||    
T  42167323 tataagctagtgaaaaaaactttttaccaaacacatcttattatatcaaaacaagcttataag 42167385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 97 - 171
Target Start/End: Complemental strand, 49918323 - 49918249
Alignment:
Q  97 tttttatcaaacacatcttattctatcaaaacaagcttataagttagcttatttgtgttaccaaacacaacctaa 171  Q
    |||||||||||||| ||| ||| |||||||||||||||||||| || ||| |||||||||||||||||| |||||    
T  49918323 tttttatcaaacacgtctcattttatcaaaacaagcttataagctaacttttttgtgttaccaaacacagcctaa 49918249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 75 - 139
Target Start/End: Complemental strand, 7041840 - 7041776
Alignment:
Q  75 actataagctagttgaaaaaactttttatcaaacacatcttattctatcaaaacaagcttataag 139  Q
    ||||||||| |||  ||||||||||||| ||||||||||||||| ||||||||||||||||||||    
T  7041840 actataagcaagtgaaaaaaactttttaccaaacacatcttattatatcaaaacaagcttataag 7041776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 76 - 143
Target Start/End: Complemental strand, 46668450 - 46668383
Alignment:
Q  76 ctataagctagttgaaaaaactttttatcaaacacatcttattctatcaaaacaagcttataagttag 143  Q
    ||||||||||||   |||| ||||||| ||||||||||||||| ||||||||||||||||||||||||    
T  46668450 ctataagctagtgtgaaaagctttttaccaaacacatcttattttatcaaaacaagcttataagttag 46668383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 77 - 139
Target Start/End: Complemental strand, 41888916 - 41888855
Alignment:
Q  77 tataagctagttgaaaaaactttttatcaaacacatcttattctatcaaaacaagcttataag 139  Q
    |||||||||||  ||||||||||||| ||||||||||||||| ||||||||||||||||||||    
T  41888916 tataagctagtgaaaaaaacttttta-caaacacatcttattatatcaaaacaagcttataag 41888855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 76 - 139
Target Start/End: Complemental strand, 50935822 - 50935759
Alignment:
Q  76 ctataagctagttgaaaaaactttttatcaaacacatcttattctatcaaaacaagcttataag 139  Q
    ||||||||||||  ||||| | ||||||||||||||| ||||| ||||||||||||||||||||    
T  50935822 ctataagctagtgaaaaaagcattttatcaaacacatattattatatcaaaacaagcttataag 50935759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 77 - 139
Target Start/End: Original strand, 32390105 - 32390167
Alignment:
Q  77 tataagctagttgaaaaaactttttatcaaacacatcttattctatcaaaacaagcttataag 139  Q
    |||||||||||   |||||||||||| ||||||||||| ||| ||||||||||||||||||||    
T  32390105 tataagctagtgagaaaaactttttaccaaacacatctcattttatcaaaacaagcttataag 32390167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 77 - 139
Target Start/End: Complemental strand, 43860834 - 43860772
Alignment:
Q  77 tataagctagttgaaaaaactttttatcaaacacatcttattctatcaaaacaagcttataag 139  Q
    |||||| ||||  ||||| ||||||| ||||||||||||||| ||||||||||||||||||||    
T  43860834 tataagttagtgaaaaaagctttttaccaaacacatcttattatatcaaaacaagcttataag 43860772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 91 - 139
Target Start/End: Complemental strand, 36807016 - 36806968
Alignment:
Q  91 aaaaactttttatcaaacacatcttattctatcaaaacaagcttataag 139  Q
    |||| ||||||||||||||||||| ||| ||||||||||||||||||||    
T  36807016 aaaagctttttatcaaacacatctcattttatcaaaacaagcttataag 36806968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 76 - 136
Target Start/End: Original strand, 44896056 - 44896116
Alignment:
Q  76 ctataagctagttgaaaaaactttttatcaaacacatcttattctatcaaaacaagcttat 136  Q
    ||||||||||||  |||||  |||||| ||||||||||| |||||||||||||||||||||    
T  44896056 ctataagctagtgaaaaaagttttttaccaaacacatctcattctatcaaaacaagcttat 44896116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 91 - 139
Target Start/End: Complemental strand, 46115082 - 46115034
Alignment:
Q  91 aaaaactttttatcaaacacatcttattctatcaaaacaagcttataag 139  Q
    |||||||||||| |||||||||  |||||||||||||||||||||||||    
T  46115082 aaaaactttttaccaaacacattatattctatcaaaacaagcttataag 46115034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 76 - 139
Target Start/End: Original strand, 32111550 - 32111613
Alignment:
Q  76 ctataagctagttgaaaaaactttttatcaaacacatcttattctatcaaaacaagcttataag 139  Q
    ||||||||||||   |||| ||||||| ||||||||||| ||| ||||||||||||||||||||    
T  32111550 ctataagctagtgagaaaagctttttaccaaacacatctcattttatcaaaacaagcttataag 32111613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 76 - 139
Target Start/End: Original strand, 40374498 - 40374561
Alignment:
Q  76 ctataagctagttgaaaaaactttttatcaaacacatcttattctatcaaaacaagcttataag 139  Q
    ||||||||||||   |||| ||||||| ||||||||||| ||| ||||||||||||||||||||    
T  40374498 ctataagctagtgagaaaagctttttaccaaacacatctcattttatcaaaacaagcttataag 40374561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 97 - 139
Target Start/End: Complemental strand, 22978167 - 22978125
Alignment:
Q  97 tttttatcaaacacatcttattctatcaaaacaagcttataag 139  Q
    |||||| ||||||||||||||| ||||||||||||||||||||    
T  22978167 tttttaccaaacacatcttattatatcaaaacaagcttataag 22978125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 90 - 139
Target Start/End: Original strand, 39534945 - 39534994
Alignment:
Q  90 aaaaaactttttatcaaacacatcttattctatcaaaacaagcttataag 139  Q
    ||||| ||||||| ||||||||||| |||||||||||| |||||||||||    
T  39534945 aaaaagctttttaccaaacacatctcattctatcaaaaaaagcttataag 39534994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 99 - 139
Target Start/End: Original strand, 34785891 - 34785931
Alignment:
Q  99 tttatcaaacacatcttattctatcaaaacaagcttataag 139  Q
    |||| ||||||| ||||||||||||||||||||||||||||    
T  34785891 tttaccaaacacgtcttattctatcaaaacaagcttataag 34785931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 125 - 168
Target Start/End: Original strand, 2557962 - 2558004
Alignment:
Q  125 aaacaagcttataagttagcttatttgtgttaccaaacacaacc 168  Q
    ||||||||| |||||||||||| |||||||||||||||||||||    
T  2557962 aaacaagct-ataagttagcttttttgtgttaccaaacacaacc 2558004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 76 - 139
Target Start/End: Complemental strand, 6586374 - 6586311
Alignment:
Q  76 ctataagctagttgaaaaaactttttatcaaacacatcttattctatcaaaacaagcttataag 139  Q
    ||||||||||||   |||| ||||||| ||||||||| | ||| ||||||||||||||||||||    
T  6586374 ctataagctagtgagaaaagctttttaccaaacacatatcattttatcaaaacaagcttataag 6586311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 76 - 139
Target Start/End: Original strand, 40980130 - 40980193
Alignment:
Q  76 ctataagctagttgaaaaaactttttatcaaacacatcttattctatcaaaacaagcttataag 139  Q
    ||||||||||||   |||| ||||||| ||||||||||| ||| |||||||||||| |||||||    
T  40980130 ctataagctagtgagaaaagctttttaccaaacacatctcattttatcaaaacaagtttataag 40980193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 97 - 139
Target Start/End: Complemental strand, 5506020 - 5505978
Alignment:
Q  97 tttttatcaaacacatcttattctatcaaaacaagcttataag 139  Q
    |||||| ||||||||||| ||||||||||||||| ||||||||    
T  5506020 tttttaccaaacacatctcattctatcaaaacaaacttataag 5505978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 97 - 139
Target Start/End: Original strand, 50938248 - 50938290
Alignment:
Q  97 tttttatcaaacacatcttattctatcaaaacaagcttataag 139  Q
    |||||||||||||||||||||| ||| |||||||| |||||||    
T  50938248 tttttatcaaacacatcttattatataaaaacaaggttataag 50938290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 97 - 138
Target Start/End: Original strand, 41889432 - 41889473
Alignment:
Q  97 tttttatcaaacacatcttattctatcaaaacaagcttataa 138  Q
    |||||| |||| |||||||||| |||||||||||||||||||    
T  41889432 tttttaccaaatacatcttattatatcaaaacaagcttataa 41889473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 134 - 174
Target Start/End: Complemental strand, 19274761 - 19274721
Alignment:
Q  134 tataagttagcttatttgtgttaccaaacacaacctaaatg 174  Q
    |||||| |||||| |||||||||||||||||| ||||||||    
T  19274761 tataagctagcttttttgtgttaccaaacacagcctaaatg 19274721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 51; Significance: 2e-20; HSPs: 14)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 77 - 139
Target Start/End: Original strand, 34574586 - 34574648
Alignment:
Q  77 tataagctagttgaaaaaactttttatcaaacacatcttattctatcaaaacaagcttataag 139  Q
    ||||||||||| |||||||||||||| ||||||||||||||| ||||||||||||||||||||    
T  34574586 tataagctagtggaaaaaactttttaccaaacacatcttattatatcaaaacaagcttataag 34574648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 76 - 139
Target Start/End: Complemental strand, 24159346 - 24159284
Alignment:
Q  76 ctataagctagttgaaaaaactttttatcaaacacatcttattctatcaaaacaagcttataag 139  Q
    |||||||||||| |||||| ||||||| ||||||||||||||| ||||||||||||||||||||    
T  24159346 ctataagctagt-gaaaaagctttttaccaaacacatcttattatatcaaaacaagcttataag 24159284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 76 - 139
Target Start/End: Original strand, 31603902 - 31603965
Alignment:
Q  76 ctataagctagttgaaaaaactttttatcaaacacatcttattctatcaaaacaagcttataag 139  Q
    ||||||||||||  |||||  |||||| |||||||||| |||||||||||||||||||||||||    
T  31603902 ctataagctagtgaaaaaagttttttaccaaacacatcgtattctatcaaaacaagcttataag 31603965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 77 - 139
Target Start/End: Complemental strand, 15508457 - 15508395
Alignment:
Q  77 tataagctagttgaaaaaactttttatcaaacacatcttattctatcaaaacaagcttataag 139  Q
    |||| ||||||  ||||||||||||| ||||||||||||||| |||||||| |||||||||||    
T  15508457 tatacgctagtgaaaaaaactttttaccaaacacatcttattatatcaaaataagcttataag 15508395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 97 - 138
Target Start/End: Complemental strand, 5956510 - 5956469
Alignment:
Q  97 tttttatcaaacacatcttattctatcaaaacaagcttataa 138  Q
    |||||||||||||| |||||||||||||||||||||||||||    
T  5956510 tttttatcaaacacgtcttattctatcaaaacaagcttataa 5956469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 87 - 139
Target Start/End: Complemental strand, 1290480 - 1290428
Alignment:
Q  87 ttgaaaaaactttttatcaaacacatcttattctatcaaaacaagcttataag 139  Q
    |||||||||||||||| |||||||| |||||||||||| || |||||||||||    
T  1290480 ttgaaaaaactttttaccaaacacaacttattctatcataataagcttataag 1290428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 76 - 144
Target Start/End: Original strand, 31259538 - 31259606
Alignment:
Q  76 ctataagctagttgaaaaaactttttatcaaacacatcttattctatcaaaacaagcttataagttagc 144  Q
    ||||||||||||   ||||||||||||  |||||||||| ||| |||||||||||||||||||| ||||    
T  31259538 ctataagctagtgagaaaaactttttactaaacacatctcattttatcaaaacaagcttataagctagc 31259606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 76 - 139
Target Start/End: Original strand, 5090074 - 5090137
Alignment:
Q  76 ctataagctagttgaaaaaactttttatcaaacacatcttattctatcaaaacaagcttataag 139  Q
    |||||||||||| |||||| ||||||| |  |||||||||||| ||||||||||| ||||||||    
T  5090074 ctataagctagtggaaaaagctttttaccctacacatcttattatatcaaaacaaacttataag 5090137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 76 - 139
Target Start/End: Original strand, 18368724 - 18368787
Alignment:
Q  76 ctataagctagttgaaaaaactttttatcaaacacatcttattctatcaaaacaagcttataag 139  Q
    ||||||||||||   |||| ||||||| ||||||||||| ||| ||||||||||||||||||||    
T  18368724 ctataagctagtgagaaaagctttttaccaaacacatctcattttatcaaaacaagcttataag 18368787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 76 - 138
Target Start/End: Complemental strand, 191032 - 190970
Alignment:
Q  76 ctataagctagttgaaaaaactttttatcaaacacatcttattctatcaaaacaagcttataa 138  Q
    ||||||||||||   |||| ||||||| ||||||||||| ||| |||||||||||||||||||    
T  191032 ctataagctagtgagaaaagctttttaccaaacacatctcattttatcaaaacaagcttataa 190970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 91 - 143
Target Start/End: Complemental strand, 18801794 - 18801742
Alignment:
Q  91 aaaaactttttatcaaacacatcttattctatcaaaacaagcttataagttag 143  Q
    |||| ||||||| ||||||| ||| ||| ||||||||||||||||||||||||    
T  18801794 aaaagctttttaccaaacacgtctcattttatcaaaacaagcttataagttag 18801742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 76 - 139
Target Start/End: Complemental strand, 1789896 - 1789833
Alignment:
Q  76 ctataagctagttgaaaaaactttttatcaaacacatcttattctatcaaaacaagcttataag 139  Q
    ||||||||||||   |||| ||||||| ||||||| ||| ||| ||||||||||||||||||||    
T  1789896 ctataagctagtgagaaaagctttttaccaaacacgtctcattttatcaaaacaagcttataag 1789833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 76 - 139
Target Start/End: Complemental strand, 4976633 - 4976570
Alignment:
Q  76 ctataagctagttgaaaaaactttttatcaaacacatcttattctatcaaaacaagcttataag 139  Q
    ||||||||||||   |||| ||||||| ||||||| ||| ||| ||||||||||||||||||||    
T  4976633 ctataagctagtgagaaaagctttttaccaaacacgtctcattttatcaaaacaagcttataag 4976570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 96 - 143
Target Start/End: Complemental strand, 34803984 - 34803937
Alignment:
Q  96 ctttttatcaaacacatcttattctatcaaaacaagcttataagttag 143  Q
    ||||||| |||| |||||||||| |||||||| |||||||||||||||    
T  34803984 ctttttaccaaaaacatcttattatatcaaaataagcttataagttag 34803937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 51; Significance: 2e-20; HSPs: 12)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 91 - 165
Target Start/End: Original strand, 7948443 - 7948517
Alignment:
Q  91 aaaaactttttatcaaacacatcttattctatcaaaacaagcttataagttagcttatttgtgttaccaaacaca 165  Q
    |||| ||||||| ||||||||||| ||| |||||||||||||||||||| |||||| ||||||||||||||||||    
T  7948443 aaaagctttttaccaaacacatctcattttatcaaaacaagcttataagctagcttttttgtgttaccaaacaca 7948517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 97 - 165
Target Start/End: Complemental strand, 41356309 - 41356241
Alignment:
Q  97 tttttatcaaacacatcttattctatcaaaacaagcttataagttagcttatttgtgttaccaaacaca 165  Q
    |||||||||||||||||  |||||||||||||||||||||||  || ||| ||||||||||||||||||    
T  41356309 tttttatcaaacacatcccattctatcaaaacaagcttataaactaacttttttgtgttaccaaacaca 41356241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 76 - 139
Target Start/End: Original strand, 20017296 - 20017359
Alignment:
Q  76 ctataagctagttgaaaaaactttttatcaaacacatcttattctatcaaaacaagcttataag 139  Q
    ||||||||||||   |||||||||||| ||||||||||| ||| ||||||||||||||||||||    
T  20017296 ctataagctagtgagaaaaactttttaccaaacacatctcattttatcaaaacaagcttataag 20017359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 77 - 139
Target Start/End: Original strand, 20768859 - 20768921
Alignment:
Q  77 tataagctagttgaaaaaactttttatcaaacacatcttattctatcaaaacaagcttataag 139  Q
    |||||||||||   |||| ||||||| ||||||||||| ||| ||||||||||||||||||||    
T  20768859 tataagctagtaagaaaagctttttaccaaacacatctcattttatcaaaacaagcttataag 20768921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 76 - 139
Target Start/End: Original strand, 3078531 - 3078594
Alignment:
Q  76 ctataagctagttgaaaaaactttttatcaaacacatcttattctatcaaaacaagcttataag 139  Q
    ||||||||||||   |||||||||||| ||||||| ||| ||| |||||||||||| |||||||    
T  3078531 ctataagctagtgagaaaaactttttaccaaacacgtctcattttatcaaaacaagtttataag 3078594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 76 - 139
Target Start/End: Original strand, 4559470 - 4559533
Alignment:
Q  76 ctataagctagttgaaaaaactttttatcaaacacatcttattctatcaaaacaagcttataag 139  Q
    |||||||||| |  |||||  |||||| ||||||||||| |||||||||| |||||||||||||    
T  4559470 ctataagctaatgaaaaaagttttttaccaaacacatctcattctatcaagacaagcttataag 4559533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 76 - 139
Target Start/End: Complemental strand, 8520676 - 8520613
Alignment:
Q  76 ctataagctagttgaaaaaactttttatcaaacacatcttattctatcaaaacaagcttataag 139  Q
    ||||||||||||   ||||  |||||| ||||||||||| ||||||||||||| ||||||||||    
T  8520676 ctataagctagtgagaaaagatttttaccaaacacatctcattctatcaaaactagcttataag 8520613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 96 - 139
Target Start/End: Complemental strand, 11575711 - 11575668
Alignment:
Q  96 ctttttatcaaacacatcttattctatcaaaacaagcttataag 139  Q
    ||||||| ||||||||||| ||||||||||||||| ||||||||    
T  11575711 ctttttaccaaacacatctcattctatcaaaacaaacttataag 11575668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 76 - 139
Target Start/End: Complemental strand, 13019103 - 13019040
Alignment:
Q  76 ctataagctagttgaaaaaactttttatcaaacacatcttattctatcaaaacaagcttataag 139  Q
    ||||||||||||   |||| ||||||| ||||||||||| ||| ||||||||||| ||||||||    
T  13019103 ctataagctagtgagaaaagctttttaccaaacacatctcattttatcaaaacaaacttataag 13019040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 114 - 165
Target Start/End: Original strand, 37256157 - 37256208
Alignment:
Q  114 ttattctatcaaaacaagcttataagttagcttatttgtgttaccaaacaca 165  Q
    ||||| ||||||||||| |||||||| ||||||||| || ||||||||||||    
T  37256157 ttattatatcaaaacaaacttataagctagcttattcgtattaccaaacaca 37256208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 97 - 139
Target Start/End: Complemental strand, 15524450 - 15524408
Alignment:
Q  97 tttttatcaaacacatcttattctatcaaaacaagcttataag 139  Q
    |||||| ||||||||||||||| |||||||||||| |||||||    
T  15524450 tttttaccaaacacatcttattatatcaaaacaaggttataag 15524408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 134 - 172
Target Start/End: Complemental strand, 36959497 - 36959459
Alignment:
Q  134 tataagttagcttatttgtgttaccaaacacaacctaaa 172  Q
    |||||| |||||| |||||||||||||||||||||||||    
T  36959497 tataagctagcttttttgtgttaccaaacacaacctaaa 36959459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 50; Significance: 1e-19; HSPs: 30)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 76 - 141
Target Start/End: Complemental strand, 27906500 - 27906435
Alignment:
Q  76 ctataagctagttgaaaaaactttttatcaaacacatcttattctatcaaaacaagcttataagtt 141  Q
    |||||||||||| | |||||||||||| |||| |||||||||||||||||||||||||||||||||    
T  27906500 ctataagctagtgggaaaaactttttaccaaatacatcttattctatcaaaacaagcttataagtt 27906435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 76 - 139
Target Start/End: Original strand, 31030754 - 31030817
Alignment:
Q  76 ctataagctagttgaaaaaactttttatcaaacacatcttattctatcaaaacaagcttataag 139  Q
    ||||||||||||   |||||||||||| ||||||||||||||| ||||||||||||||||||||    
T  31030754 ctataagctagtgagaaaaactttttaccaaacacatcttattttatcaaaacaagcttataag 31030817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 76 - 139
Target Start/End: Original strand, 33982305 - 33982368
Alignment:
Q  76 ctataagctagttgaaaaaactttttatcaaacacatcttattctatcaaaacaagcttataag 139  Q
    ||||||||||||  ||||| ||||||| ||||||||||||||| ||||||||||||||||||||    
T  33982305 ctataagctagtgaaaaaagctttttaccaaacacatcttattatatcaaaacaagcttataag 33982368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 76 - 168
Target Start/End: Complemental strand, 38224734 - 38224639
Alignment:
Q  76 ctataagctagttgaaaaaactttttatcaaacacatcttattctatcaaaacaagcttat----aagttagcttatttgtgttaccaaacacaacc 168  Q
    |||||||||||| ||||| | |||||| ||||||||||||||| || |||||||||||||     ||| ||||||||||||||||||||||||||||    
T  38224734 ctataagctagt-gaaaagagtttttaccaaacacatcttattataacaaaacaagcttagctacaagctagcttatttgtgttaccaaacacaacc 38224639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 76 - 139
Target Start/End: Original strand, 43544886 - 43544949
Alignment:
Q  76 ctataagctagttgaaaaaactttttatcaaacacatcttattctatcaaaacaagcttataag 139  Q
    ||||||||||||  ||||| ||||||| ||||||||||||||| ||||||||||||||||||||    
T  43544886 ctataagctagtgaaaaaagctttttaccaaacacatcttattatatcaaaacaagcttataag 43544949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 78 - 136
Target Start/End: Original strand, 42833716 - 42833774
Alignment:
Q  78 ataagctagttgaaaaaactttttatcaaacacatcttattctatcaaaacaagcttat 136  Q
    ||||||||||  |||||  |||||||||||||||||||||| |||||||||||||||||    
T  42833716 ataagctagtgaaaaaagttttttatcaaacacatcttattatatcaaaacaagcttat 42833774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 90 - 139
Target Start/End: Original strand, 3117304 - 3117353
Alignment:
Q  90 aaaaaactttttatcaaacacatcttattctatcaaaacaagcttataag 139  Q
    ||||||||||||||||||||| ||| || |||||||||||||||||||||    
T  3117304 aaaaaactttttatcaaacacgtctcatcctatcaaaacaagcttataag 3117353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 98 - 139
Target Start/End: Complemental strand, 36121518 - 36121477
Alignment:
Q  98 ttttatcaaacacatcttattctatcaaaacaagcttataag 139  Q
    ||||| ||||||||||||||||||||||||||||||||||||    
T  36121518 ttttaccaaacacatcttattctatcaaaacaagcttataag 36121477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 76 - 141
Target Start/End: Original strand, 44104566 - 44104631
Alignment:
Q  76 ctataagctagttgaaaaaactttttatcaaacacatcttattctatcaaaacaagcttataagtt 141  Q
    |||||||||| |  ||||| ||||||| ||||||||||| |||||||||| |||||||||||||||    
T  44104566 ctataagctaatgaaaaaagctttttaccaaacacatctcattctatcaagacaagcttataagtt 44104631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 91 - 139
Target Start/End: Original strand, 8932505 - 8932553
Alignment:
Q  91 aaaaactttttatcaaacacatcttattctatcaaaacaagcttataag 139  Q
    |||| ||||||| ||||||||||| ||||||||||||||||||||||||    
T  8932505 aaaagctttttaccaaacacatctcattctatcaaaacaagcttataag 8932553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 76 - 139
Target Start/End: Original strand, 1601970 - 1602033
Alignment:
Q  76 ctataagctagttgaaaaaactttttatcaaacacatcttattctatcaaaacaagcttataag 139  Q
    ||||||||||||   |||| ||||||| ||||||||||| ||||||||||||| ||||||||||    
T  1601970 ctataagctagtgagaaaagctttttaccaaacacatctcattctatcaaaactagcttataag 1602033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 76 - 139
Target Start/End: Original strand, 9806579 - 9806642
Alignment:
Q  76 ctataagctagttgaaaaaactttttatcaaacacatcttattctatcaaaacaagcttataag 139  Q
    ||||||||||||   |||| ||||||| ||||||||||| ||| ||||||||||||||||||||    
T  9806579 ctataagctagtgagaaaagctttttaccaaacacatctcattttatcaaaacaagcttataag 9806642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 76 - 143
Target Start/End: Original strand, 31436237 - 31436304
Alignment:
Q  76 ctataagctagttgaaaaaactttttatcaaacacatcttattctatcaaaacaagcttataagttag 143  Q
    ||||||||||||   |||||||||||| ||||||||| | ||| |||||||||||| |||||||||||    
T  31436237 ctataagctagtgagaaaaactttttaccaaacacatttcattttatcaaaacaagtttataagttag 31436304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 76 - 143
Target Start/End: Original strand, 31969456 - 31969523
Alignment:
Q  76 ctataagctagttgaaaaaactttttatcaaacacatcttattctatcaaaacaagcttataagttag 143  Q
    ||||||||||||   |||| ||||||| ||||||||| | ||| ||||||||||||||||||||||||    
T  31969456 ctataagctagtgagaaaagctttttaccaaacacatttcattttatcaaaacaagcttataagttag 31969523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 76 - 139
Target Start/End: Complemental strand, 33979725 - 33979662
Alignment:
Q  76 ctataagctagttgaaaaaactttttatcaaacacatcttattctatcaaaacaagcttataag 139  Q
    ||||||||||||  |||||  |||||| ||||||||||||||| |||||||||| |||||||||    
T  33979725 ctataagctagtgaaaaaagttttttaccaaacacatcttattatatcaaaacatgcttataag 33979662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 76 - 139
Target Start/End: Original strand, 37658105 - 37658168
Alignment:
Q  76 ctataagctagttgaaaaaactttttatcaaacacatcttattctatcaaaacaagcttataag 139  Q
    ||||||||||||   |||| ||||||| ||||||||||| ||| ||||||||||||||||||||    
T  37658105 ctataagctagtgagaaaagctttttaccaaacacatctcattttatcaaaacaagcttataag 37658168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 76 - 143
Target Start/End: Complemental strand, 42825964 - 42825897
Alignment:
Q  76 ctataagctagttgaaaaaactttttatcaaacacatcttattctatcaaaacaagcttataagttag 143  Q
    ||||||||||||  ||||| |||||||  ||||||||||||||  |||||||||||||||||| ||||    
T  42825964 ctataagctagtgaaaaaagctttttactaaacacatcttattaaatcaaaacaagcttataaattag 42825897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 77 - 139
Target Start/End: Original strand, 39870012 - 39870074
Alignment:
Q  77 tataagctagttgaaaaaactttttatcaaacacatcttattctatcaaaacaagcttataag 139  Q
    |||||||||||   |||| ||||||| ||||||||||| ||| ||||||||||||||||||||    
T  39870012 tataagctagtgagaaaagctttttaccaaacacatctcattttatcaaaacaagcttataag 39870074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 77 - 139
Target Start/End: Complemental strand, 41406296 - 41406234
Alignment:
Q  77 tataagctagttgaaaaaactttttatcaaacacatcttattctatcaaaacaagcttataag 139  Q
    |||||||||||  ||||| ||||| | |||||||||||||||  |||||||||||||||||||    
T  41406296 tataagctagtgaaaaaagcttttcaccaaacacatcttattaaatcaaaacaagcttataag 41406234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 75 - 139
Target Start/End: Complemental strand, 40061273 - 40061209
Alignment:
Q  75 actataagctagttgaaaaaactttttatcaaacacatcttattctatcaaaacaagcttataag 139  Q
    |||||||||||||   |||| ||||||| ||||||||||| ||| ||| ||||||||||||||||    
T  40061273 actataagctagtgagaaaagctttttaccaaacacatctcattttattaaaacaagcttataag 40061209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 76 - 139
Target Start/End: Original strand, 596102 - 596165
Alignment:
Q  76 ctataagctagttgaaaaaactttttatcaaacacatcttattctatcaaaacaagcttataag 139  Q
    ||||||||||||  |||||  |||||| |||||||||  |||| ||||||||||||||||||||    
T  596102 ctataagctagtgaaaaaagttttttaccaaacacattatattatatcaaaacaagcttataag 596165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 76 - 139
Target Start/End: Complemental strand, 30582780 - 30582717
Alignment:
Q  76 ctataagctagttgaaaaaactttttatcaaacacatcttattctatcaaaacaagcttataag 139  Q
    ||||||||||||   |||| ||||||| ||||||||| | ||| ||||||||||||||||||||    
T  30582780 ctataagctagtgagaaaagctttttaccaaacacatatcattttatcaaaacaagcttataag 30582717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 76 - 139
Target Start/End: Complemental strand, 31619614 - 31619551
Alignment:
Q  76 ctataagctagttgaaaaaactttttatcaaacacatcttattctatcaaaacaagcttataag 139  Q
    ||||||||||||   |||| ||||||| ||||||| ||| ||| ||||||||||||||||||||    
T  31619614 ctataagctagtgataaaagctttttaccaaacacgtctcattttatcaaaacaagcttataag 31619551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 76 - 139
Target Start/End: Original strand, 35670344 - 35670407
Alignment:
Q  76 ctataagctagttgaaaaaactttttatcaaacacatcttattctatcaaaacaagcttataag 139  Q
    ||||||||||||   ||||  |||||| ||||||||||| ||| ||||||||||||||||||||    
T  35670344 ctataagctagtgagaaaagttttttaccaaacacatctcattttatcaaaacaagcttataag 35670407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 134 - 168
Target Start/End: Original strand, 43544964 - 43544998
Alignment:
Q  134 tataagttagcttatttgtgttaccaaacacaacc 168  Q
    |||||||||||||||| ||||||||||||||||||    
T  43544964 tataagttagcttattcgtgttaccaaacacaacc 43544998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 87 - 139
Target Start/End: Original strand, 585890 - 585943
Alignment:
Q  87 ttgaaaaaacttt-ttatcaaacacatcttattctatcaaaacaagcttataag 139  Q
    ||||||||| ||| ||| ||||||||||||||| |||||||| |||||||||||    
T  585890 ttgaaaaaagtttcttaccaaacacatcttattttatcaaaataagcttataag 585943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 134 - 174
Target Start/End: Original strand, 28958190 - 28958230
Alignment:
Q  134 tataagttagcttatttgtgttaccaaacacaacctaaatg 174  Q
    |||||| |||||| ||||||||||||||||||||| |||||    
T  28958190 tataagctagcttttttgtgttaccaaacacaaccaaaatg 28958230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 76 - 139
Target Start/End: Original strand, 37708080 - 37708144
Alignment:
Q  76 ctataagctagttgaaaaaacttttt-atcaaacacatcttattctatcaaaacaagcttataag 139  Q
    ||||||||||||  ||||| |||||| | || |||||||||||| |||||||||||| |||||||    
T  37708080 ctataagctagtgaaaaaagcttttttaccagacacatcttattatatcaaaacaaggttataag 37708144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 91 - 139
Target Start/End: Original strand, 43468015 - 43468063
Alignment:
Q  91 aaaaactttttatcaaacacatcttattctatcaaaacaagcttataag 139  Q
    |||| ||||||| ||||||||||| ||| ||||||||||| ||||||||    
T  43468015 aaaagctttttaccaaacacatctcattttatcaaaacaaacttataag 43468063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 78 - 138
Target Start/End: Original strand, 46615782 - 46615841
Alignment:
Q  78 ataagctagttgaaaaaactttttatcaaacacatcttattctatcaaaacaagcttataa 138  Q
    |||||||| || ||||||||||||| ||||||| ||||||||| | |||| ||||||||||    
T  46615782 ataagctaattaaaaaaactttttaccaaacacgtcttattct-ttaaaaaaagcttataa 46615841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 48; Significance: 2e-18; HSPs: 25)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 76 - 139
Target Start/End: Complemental strand, 37241058 - 37240995
Alignment:
Q  76 ctataagctagttgaaaaaactttttatcaaacacatcttattctatcaaaacaagcttataag 139  Q
    |||||||||||| |||||| ||||||| ||||||||||||||||||||||||||| ||||||||    
T  37241058 ctataagctagtggaaaaagctttttagcaaacacatcttattctatcaaaacaaacttataag 37240995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 76 - 165
Target Start/End: Complemental strand, 18246784 - 18246691
Alignment:
Q  76 ctataagctagttgaaaaaactttttatcaaacacatcttattctatcaaaacaagct----tataagttagcttatttgtgttaccaaacaca 165  Q
    ||||||||||||  ||||| ||||||| ||||||||||||||| || |||||||||||    |||||| ||||||||| || ||||||||||||    
T  18246784 ctataagctagtgaaaaaagctttttaccaaacacatcttattataacaaaacaagcttagctataagctagcttattcgtattaccaaacaca 18246691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 8 - 56
Target Start/End: Original strand, 37241440 - 37241488
Alignment:
Q  8 ttttaaagaatataaaacaaaggcatgttactaatagttcatataataa 56  Q
    |||||||||| ||||||||||| ||||||||||||||||||||||||||    
T  37241440 ttttaaagaacataaaacaaagacatgttactaatagttcatataataa 37241488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 76 - 143
Target Start/End: Complemental strand, 1086152 - 1086085
Alignment:
Q  76 ctataagctagttgaaaaaactttttatcaaacacatcttattctatcaaaacaagcttataagttag 143  Q
    |||||||||||| | ||||  ||| || ||||||||||||||| ||||||||||||||||||||||||    
T  1086152 ctataagctagtgggaaaagttttataccaaacacatcttattttatcaaaacaagcttataagttag 1086085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 76 - 139
Target Start/End: Complemental strand, 14452409 - 14452346
Alignment:
Q  76 ctataagctagttgaaaaaactttttatcaaacacatcttattctatcaaaacaagcttataag 139  Q
    ||||||||||||   |||| ||||||| ||||||||||||||| ||||||||||||||||||||    
T  14452409 ctataagctagtgacaaaagctttttaccaaacacatcttattatatcaaaacaagcttataag 14452346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 76 - 139
Target Start/End: Complemental strand, 33179070 - 33179007
Alignment:
Q  76 ctataagctagttgaaaaaactttttatcaaacacatcttattctatcaaaacaagcttataag 139  Q
    ||||||||||||  |||||  |||||| ||||||||||||||| ||||||||||||||||||||    
T  33179070 ctataagctagtgaaaaaagatttttaccaaacacatcttattatatcaaaacaagcttataag 33179007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 76 - 139
Target Start/End: Complemental strand, 36601046 - 36600983
Alignment:
Q  76 ctataagctagttgaaaaaactttttatcaaacacatcttattctatcaaaacaagcttataag 139  Q
    |||| |||||||  ||||| ||||||| ||||||||| ||||| ||||||||||||||||||||    
T  36601046 ctattagctagtgaaaaaagctttttaccaaacacattttattatatcaaaacaagcttataag 36600983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 76 - 139
Target Start/End: Original strand, 40862194 - 40862257
Alignment:
Q  76 ctataagctagttgaaaaaactttttatcaaacacatcttattctatcaaaacaagcttataag 139  Q
    ||||||||||||   |||| ||||||| ||||||||||| ||| ||||||||||||||||||||    
T  40862194 ctataagctagtgagaaaagctttttaccaaacacatctcattttatcaaaacaagcttataag 40862257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 97 - 139
Target Start/End: Original strand, 33182580 - 33182622
Alignment:
Q  97 tttttatcaaacacatcttattctatcaaaacaagcttataag 139  Q
    |||||| ||||||||||||||| ||||||||||||||||||||    
T  33182580 tttttaccaaacacatcttattatatcaaaacaagcttataag 33182622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 91 - 139
Target Start/End: Original strand, 18109720 - 18109768
Alignment:
Q  91 aaaaactttttatcaaacacatcttattctatcaaaacaagcttataag 139  Q
    |||| ||||||| ||||||||||| ||| ||||||||||||||||||||    
T  18109720 aaaagctttttaccaaacacatctcattttatcaaaacaagcttataag 18109768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 76 - 136
Target Start/End: Original strand, 36602722 - 36602782
Alignment:
Q  76 ctataagctagttgaaaaaactttttatcaaacacatcttattctatcaaaacaagcttat 136  Q
    ||||||||||||  ||||| ||||||| | ||||||||||||| ||| |||||||||||||    
T  36602722 ctataagctagtgaaaaaagctttttagcgaacacatcttattatatgaaaacaagcttat 36602782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 76 - 131
Target Start/End: Original strand, 6322130 - 6322185
Alignment:
Q  76 ctataagctagttgaaaaaactttttatcaaacacatcttattctatcaaaacaag 131  Q
    ||||||||||||  |||||  |||||| ||||||||||||||| ||||||||||||    
T  6322130 ctataagctagtgaaaaaagttttttaccaaacacatcttattatatcaaaacaag 6322185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 91 - 138
Target Start/End: Original strand, 7183287 - 7183334
Alignment:
Q  91 aaaaactttttatcaaacacatcttattctatcaaaacaagcttataa 138  Q
    |||| ||||||| ||||||||| ||||| |||||||||||||||||||    
T  7183287 aaaagctttttaccaaacacattttattttatcaaaacaagcttataa 7183334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 76 - 139
Target Start/End: Complemental strand, 11447349 - 11447286
Alignment:
Q  76 ctataagctagttgaaaaaactttttatcaaacacatcttattctatcaaaacaagcttataag 139  Q
    ||||||| ||||  ||||| |||||||  ||||||||| ||||||||||||||||| |||||||    
T  11447349 ctataagttagtgaaaaaagctttttactaaacacatcgtattctatcaaaacaaggttataag 11447286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 76 - 139
Target Start/End: Original strand, 26340024 - 26340087
Alignment:
Q  76 ctataagctagttgaaaaaactttttatcaaacacatcttattctatcaaaacaagcttataag 139  Q
    ||||||||||||   |||| ||||||| |||||| |||| ||| ||||||||||||||||||||    
T  26340024 ctataagctagtgagaaaagctttttaccaaacatatctcattttatcaaaacaagcttataag 26340087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 96 - 139
Target Start/End: Original strand, 38928500 - 38928543
Alignment:
Q  96 ctttttatcaaacacatcttattctatcaaaacaagcttataag 139  Q
    ||||||| ||||||||||| ||||||||||||| ||||||||||    
T  38928500 ctttttaccaaacacatctcattctatcaaaactagcttataag 38928543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 76 - 139
Target Start/End: Complemental strand, 39532171 - 39532108
Alignment:
Q  76 ctataagctagttgaaaaaactttttatcaaacacatcttattctatcaaaacaagcttataag 139  Q
    ||||||||||||   |||| ||||||| ||||||||||| ||| ||||||||||| ||||||||    
T  39532171 ctataagctagtgagaaaagctttttaccaaacacatctcattttatcaaaacaaacttataag 39532108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 76 - 139
Target Start/End: Original strand, 44525977 - 44526040
Alignment:
Q  76 ctataagctagttgaaaaaactttttatcaaacacatcttattctatcaaaacaagcttataag 139  Q
    |||||||||| |  ||||| ||||||| ||||||||| | |||||||||||||||| |||||||    
T  44525977 ctataagctaatgaaaaaagctttttaccaaacacatttcattctatcaaaacaagtttataag 44526040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 90 - 144
Target Start/End: Original strand, 15265345 - 15265399
Alignment:
Q  90 aaaaaactttttatcaaacacatcttattctatcaaaacaagcttataagttagc 144  Q
    |||||| |||||| ||||||| ||| ||||||| |||||||||||||||| ||||    
T  15265345 aaaaaagtttttaccaaacacgtctcattctattaaaacaagcttataagctagc 15265399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 134 - 171
Target Start/End: Complemental strand, 1086074 - 1086037
Alignment:
Q  134 tataagttagcttatttgtgttaccaaacacaacctaa 171  Q
    |||||| ||||||||||||||||||||||||| |||||    
T  1086074 tataagctagcttatttgtgttaccaaacacagcctaa 1086037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 133 - 170
Target Start/End: Original strand, 8341222 - 8341259
Alignment:
Q  133 ttataagttagcttatttgtgttaccaaacacaaccta 170  Q
    ||||||| ||||||||||||||||||||||||| ||||    
T  8341222 ttataagctagcttatttgtgttaccaaacacagccta 8341259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 133 - 174
Target Start/End: Original strand, 26340101 - 26340142
Alignment:
Q  133 ttataagttagcttatttgtgttaccaaacacaacctaaatg 174  Q
    |||||||||||||| |||||||||||||||||| ||| ||||    
T  26340101 ttataagttagcttttttgtgttaccaaacacagccttaatg 26340142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 91 - 143
Target Start/End: Original strand, 240539 - 240591
Alignment:
Q  91 aaaaactttttatcaaacacatcttattctatcaaaacaagcttataagttag 143  Q
    |||| ||||||| ||||||||||| |||||||||||| || ||||||| ||||    
T  240539 aaaagctttttaccaaacacatctcattctatcaaaataatcttataaattag 240591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 97 - 137
Target Start/End: Original strand, 7454523 - 7454563
Alignment:
Q  97 tttttatcaaacacatcttattctatcaaaacaagcttata 137  Q
    |||||| ||||||||||| ||| ||||||||||||||||||    
T  7454523 tttttaccaaacacatctcattttatcaaaacaagcttata 7454563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 134 - 174
Target Start/End: Complemental strand, 10361424 - 10361384
Alignment:
Q  134 tataagttagcttatttgtgttaccaaacacaacctaaatg 174  Q
    |||||| |||||| |||||||||||||||||| ||||||||    
T  10361424 tataagctagcttttttgtgttaccaaacacagcctaaatg 10361384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 46; Significance: 2e-17; HSPs: 23)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 78 - 139
Target Start/End: Original strand, 44299936 - 44299997
Alignment:
Q  78 ataagctagttgaaaaaactttttatcaaacacatcttattctatcaaaacaagcttataag 139  Q
    ||||||||||| ||||| ||||||| ||||||||||||||| ||||||||||||||||||||    
T  44299936 ataagctagttaaaaaagctttttaccaaacacatcttattatatcaaaacaagcttataag 44299997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 76 - 143
Target Start/End: Complemental strand, 9223949 - 9223882
Alignment:
Q  76 ctataagctagttgaaaaaactttttatcaaacacatcttattctatcaaaacaagcttataagttag 143  Q
    ||||||||||||   |||| ||||||| ||||||||||||||| ||||||||||||||||||||||||    
T  9223949 ctataagctagtgagaaaagctttttaccaaacacatcttattttatcaaaacaagcttataagttag 9223882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 76 - 139
Target Start/End: Complemental strand, 5698235 - 5698172
Alignment:
Q  76 ctataagctagttgaaaaaactttttatcaaacacatcttattctatcaaaacaagcttataag 139  Q
    ||||||||||||   |||| ||||||||||||||||||| ||| ||||||||||||||||||||    
T  5698235 ctataagctagtgagaaaagctttttatcaaacacatctcattttatcaaaacaagcttataag 5698172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 98 - 140
Target Start/End: Complemental strand, 44502648 - 44502606
Alignment:
Q  98 ttttatcaaacacatcttattctatcaaaacaagcttataagt 140  Q
    ||||| |||||||||||||||||||||||||||||||||||||    
T  44502648 ttttaccaaacacatcttattctatcaaaacaagcttataagt 44502606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 90 - 139
Target Start/End: Original strand, 11756876 - 11756925
Alignment:
Q  90 aaaaaactttttatcaaacacatcttattctatcaaaacaagcttataag 139  Q
    ||||||||||||| ||||||||||||||| ||||||||| ||||||||||    
T  11756876 aaaaaactttttaccaaacacatcttattatatcaaaacgagcttataag 11756925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 76 - 143
Target Start/End: Complemental strand, 5698616 - 5698550
Alignment:
Q  76 ctataagctagttgaaaaaactttttatcaaacacatcttattctatcaaaacaagcttataagttag 143  Q
    ||||||||||||   |||| ||||||||||||||||||| ||| |||| |||||||||||||||||||    
T  5698616 ctataagctagtgagaaaagctttttatcaaacacatctcattttatc-aaacaagcttataagttag 5698550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 76 - 139
Target Start/End: Complemental strand, 14390531 - 14390468
Alignment:
Q  76 ctataagctagttgaaaaaactttttatcaaacacatcttattctatcaaaacaagcttataag 139  Q
    ||||||||||||   |||||||||||| ||||||||| | ||| ||||||||||||||||||||    
T  14390531 ctataagctagtgagaaaaactttttaccaaacacatttcattttatcaaaacaagcttataag 14390468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 76 - 139
Target Start/End: Original strand, 18545587 - 18545650
Alignment:
Q  76 ctataagctagttgaaaaaactttttatcaaacacatcttattctatcaaaacaagcttataag 139  Q
    ||||||||||||   |||| ||||||| ||||||||||| ||| ||||||||||||||||||||    
T  18545587 ctataagctagtgagaaaagctttttaccaaacacatctcattttatcaaaacaagcttataag 18545650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 76 - 139
Target Start/End: Complemental strand, 38667300 - 38667237
Alignment:
Q  76 ctataagctagttgaaaaaactttttatcaaacacatcttattctatcaaaacaagcttataag 139  Q
    ||||||||||||   |||| ||||||| ||||||||||| ||| ||||||||||||||||||||    
T  38667300 ctataagctagtgagaaaagctttttaccaaacacatctcattttatcaaaacaagcttataag 38667237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 77 - 139
Target Start/End: Complemental strand, 23259192 - 23259131
Alignment:
Q  77 tataagctagttgaaaaaactttttatcaaacacatcttattctatcaaaacaagcttataag 139  Q
    ||||||||||| |||||| |||| || ||||||||||||||| ||||||||||| ||||||||    
T  23259192 tataagctagt-gaaaaagctttctaccaaacacatcttattatatcaaaacaaacttataag 23259131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 76 - 130
Target Start/End: Complemental strand, 42159721 - 42159667
Alignment:
Q  76 ctataagctagttgaaaaaactttttatcaaacacatcttattctatcaaaacaa 130  Q
    ||||||||||||  ||||| ||||||| ||||||||||||||| |||||||||||    
T  42159721 ctataagctagtgaaaaaagctttttagcaaacacatcttattatatcaaaacaa 42159667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 77 - 139
Target Start/End: Original strand, 43847420 - 43847482
Alignment:
Q  77 tataagctagttgaaaaaactttttatcaaacacatcttattctatcaaaacaagcttataag 139  Q
    |||||| ||||  ||||| ||||||| ||||||||||||||| ||||||||| ||||||||||    
T  43847420 tataaggtagtgaaaaaagctttttaccaaacacatcttattatatcaaaactagcttataag 43847482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 97 - 139
Target Start/End: Original strand, 44109943 - 44109985
Alignment:
Q  97 tttttatcaaacacatcttattctatcaaaacaagcttataag 139  Q
    |||||| ||||||||||||||| ||||||||||||||||||||    
T  44109943 tttttaccaaacacatcttattatatcaaaacaagcttataag 44109985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 91 - 139
Target Start/End: Complemental strand, 31496704 - 31496656
Alignment:
Q  91 aaaaactttttatcaaacacatcttattctatcaaaacaagcttataag 139  Q
    |||||||||||| ||||||||||| ||||||| |||||||| |||||||    
T  31496704 aaaaactttttaccaaacacatctcattctattaaaacaagtttataag 31496656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 91 - 139
Target Start/End: Complemental strand, 35179914 - 35179866
Alignment:
Q  91 aaaaactttttatcaaacacatcttattctatcaaaacaagcttataag 139  Q
    |||| ||||||||||||||||||| ||| ||||||||||| ||||||||    
T  35179914 aaaagctttttatcaaacacatctcattttatcaaaacaaacttataag 35179866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 134 - 173
Target Start/End: Complemental strand, 9223871 - 9223832
Alignment:
Q  134 tataagttagcttatttgtgttaccaaacacaacctaaat 173  Q
    ||||||||||||| |||||||||||||||||| |||||||    
T  9223871 tataagttagcttttttgtgttaccaaacacagcctaaat 9223832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 76 - 139
Target Start/End: Complemental strand, 31656478 - 31656415
Alignment:
Q  76 ctataagctagttgaaaaaactttttatcaaacacatcttattctatcaaaacaagcttataag 139  Q
    ||||||||||||   |||| ||||||| ||||||||||| ||| ||||||||||||||| ||||    
T  31656478 ctataagctagtgagaaaagctttttaccaaacacatctcattttatcaaaacaagcttgtaag 31656415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 76 - 139
Target Start/End: Original strand, 39325507 - 39325570
Alignment:
Q  76 ctataagctagttgaaaaaactttttatcaaacacatcttattctatcaaaacaagcttataag 139  Q
    ||||||||||||   |||| ||||||| ||||||| ||| ||| ||||||||||||||||||||    
T  39325507 ctataagctagtgagaaaagctttttaccaaacacgtctcattttatcaaaacaagcttataag 39325570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 76 - 139
Target Start/End: Original strand, 42628208 - 42628271
Alignment:
Q  76 ctataagctagttgaaaaaactttttatcaaacacatcttattctatcaaaacaagcttataag 139  Q
    ||||||||||||   |||| ||||||| ||||||||||| ||| ||||||| ||||||||||||    
T  42628208 ctataagctagtgagaaaagctttttaccaaacacatctcattttatcaaagcaagcttataag 42628271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 97 - 139
Target Start/End: Original strand, 3795975 - 3796017
Alignment:
Q  97 tttttatcaaacacatcttattctatcaaaacaagcttataag 139  Q
    |||||| ||||||||||| ||| ||||||||||||||||||||    
T  3795975 tttttaccaaacacatctcattttatcaaaacaagcttataag 3796017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 97 - 139
Target Start/End: Original strand, 4361071 - 4361113
Alignment:
Q  97 tttttatcaaacacatcttattctatcaaaacaagcttataag 139  Q
    |||||| ||||||||||| ||||||| ||||||||||||||||    
T  4361071 tttttaccaaacacatctcattctattaaaacaagcttataag 4361113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 134 - 175
Target Start/End: Complemental strand, 14390453 - 14390412
Alignment:
Q  134 tataagttagcttatttgtgttaccaaacacaacctaaatga 175  Q
    |||||| |||||| |||||||||||||||||| |||||||||    
T  14390453 tataagctagcttttttgtgttaccaaacacagcctaaatga 14390412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 97 - 142
Target Start/End: Original strand, 18039995 - 18040040
Alignment:
Q  97 tttttatcaaacacatcttattctatcaaaacaagcttataagtta 142  Q
    |||||||||||||||||| | | |||||||||||| ||||||||||    
T  18039995 tttttatcaaacacatctcagtttatcaaaacaagtttataagtta 18040040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 26)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 76 - 138
Target Start/End: Original strand, 31642739 - 31642801
Alignment:
Q  76 ctataagctagttgaaaaaactttttatcaaacacatcttattctatcaaaacaagcttataa 138  Q
    |||||| ||||| |||||| ||||||| ||||||||||||||| |||||||||||||||||||    
T  31642739 ctataaactagtggaaaaagctttttaccaaacacatcttattgtatcaaaacaagcttataa 31642801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 75 - 140
Target Start/End: Original strand, 19142911 - 19142976
Alignment:
Q  75 actataagctagttgaaaaaactttttatcaaacacatcttattctatcaaaacaagcttataagt 140  Q
    |||||||||||||  ||||||||||| | ||||||||||||||| || ||||||||||||||||||    
T  19142911 actataagctagtgaaaaaaacttttcaccaaacacatcttattataacaaaacaagcttataagt 19142976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 75 - 144
Target Start/End: Complemental strand, 34617772 - 34617703
Alignment:
Q  75 actataagctagttgaaaaaactttttatcaaacacatcttattctatcaaaacaagcttataagttagc 144  Q
    |||||||||||||  |||||  |||||| ||||||||||| |||||||||||||||||||||||| ||||    
T  34617772 actataagctagtgaaaaaagttttttaccaaacacatctcattctatcaaaacaagcttataagctagc 34617703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 76 - 139
Target Start/End: Complemental strand, 35019596 - 35019533
Alignment:
Q  76 ctataagctagttgaaaaaactttttatcaaacacatcttattctatcaaaacaagcttataag 139  Q
    ||||||||||||  |||||  |||||| ||||||||||||||| ||||||||||||||||||||    
T  35019596 ctataagctagtgaaaaaagttttttaccaaacacatcttattatatcaaaacaagcttataag 35019533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 88 - 139
Target Start/End: Original strand, 35253032 - 35253083
Alignment:
Q  88 tgaaaaaactttttatcaaacacatcttattctatcaaaacaagcttataag 139  Q
    ||||||||||||||| ||||||||||  ||||||||||||||||||||||||    
T  35253032 tgaaaaaactttttaccaaacacatcgcattctatcaaaacaagcttataag 35253083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 124 - 167
Target Start/End: Original strand, 44336169 - 44336212
Alignment:
Q  124 aaaacaagcttataagttagcttatttgtgttaccaaacacaac 167  Q
    |||||||| |||||||||||||||||||||||||||||||||||    
T  44336169 aaaacaagtttataagttagcttatttgtgttaccaaacacaac 44336212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 75 - 137
Target Start/End: Complemental strand, 25133320 - 25133258
Alignment:
Q  75 actataagctagttgaaaaaactttttatcaaacacatcttattctatcaaaacaagcttata 137  Q
    |||||||||||||   |||||||||||| ||||||||||  ||||||||||||||||||||||    
T  25133320 actataagctagtgagaaaaactttttaccaaacacatcacattctatcaaaacaagcttata 25133258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 78 - 139
Target Start/End: Original strand, 38760803 - 38760863
Alignment:
Q  78 ataagctagttgaaaaaactttttatcaaacacatcttattctatcaaaacaagcttataag 139  Q
    |||||||||| |||||  ||||||| ||||||||||| ||||||||||||||||||||||||    
T  38760803 ataagctagtggaaaag-ctttttaccaaacacatctcattctatcaaaacaagcttataag 38760863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 76 - 139
Target Start/End: Complemental strand, 18146451 - 18146388
Alignment:
Q  76 ctataagctagttgaaaaaactttttatcaaacacatcttattctatcaaaacaagcttataag 139  Q
    ||||||||||||   |||| ||||||| ||||||||||| ||| ||||||||||||||||||||    
T  18146451 ctataagctagtgagaaaagctttttaccaaacacatctcattttatcaaaacaagcttataag 18146388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 76 - 143
Target Start/End: Complemental strand, 40532166 - 40532099
Alignment:
Q  76 ctataagctagttgaaaaaactttttatcaaacacatcttattctatcaaaacaagcttataagttag 143  Q
    ||||||||||||   |||| ||||||| | ||||||||| ||| ||||||||||||||||||||||||    
T  40532166 ctataagctagtgagaaaagctttttaccgaacacatctcattttatcaaaacaagcttataagttag 40532099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 76 - 139
Target Start/End: Complemental strand, 43150361 - 43150298
Alignment:
Q  76 ctataagctagttgaaaaaactttttatcaaacacatcttattctatcaaaacaagcttataag 139  Q
    ||||||||||||  |||||  |||||| ||||||||||| ||| ||||||||||||||||||||    
T  43150361 ctataagctagtgaaaaaagttttttaccaaacacatctcattttatcaaaacaagcttataag 43150298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 124 - 167
Target Start/End: Complemental strand, 44338806 - 44338763
Alignment:
Q  124 aaaacaagcttataagttagcttatttgtgttaccaaacacaac 167  Q
    |||||||| ||||||| |||||||||||||||||||||||||||    
T  44338806 aaaacaagtttataagctagcttatttgtgttaccaaacacaac 44338763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 76 - 139
Target Start/End: Original strand, 45069809 - 45069872
Alignment:
Q  76 ctataagctagttgaaaaaactttttatcaaacacatcttattctatcaaaacaagcttataag 139  Q
    ||||||||||||   |||| ||||||| ||||||||||| ||| ||||||||||||||||||||    
T  45069809 ctataagctagtgagaaaagctttttaccaaacacatctcattttatcaaaacaagcttataag 45069872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 76 - 139
Target Start/End: Original strand, 45237783 - 45237846
Alignment:
Q  76 ctataagctagttgaaaaaactttttatcaaacacatcttattctatcaaaacaagcttataag 139  Q
    |||||||||| |  ||||| ||||||| ||||||||||| |||||||||| |||||||||||||    
T  45237783 ctataagctaatgaaaaaagctttttaccaaacacatctcattctatcaagacaagcttataag 45237846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 80 - 138
Target Start/End: Original strand, 38364465 - 38364523
Alignment:
Q  80 aagctagttgaaaaaactttttatcaaacacatcttattctatcaaaacaagcttataa 138  Q
    ||||||||  |||||  |||||| ||||||||||||||| |||||||||||||||||||    
T  38364465 aagctagtgaaaaaagttttttaccaaacacatcttattatatcaaaacaagcttataa 38364523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 91 - 143
Target Start/End: Original strand, 29051178 - 29051230
Alignment:
Q  91 aaaaactttttatcaaacacatcttattctatcaaaacaagcttataagttag 143  Q
    |||| ||||||| ||||||||||  ||||||||||||||||||||| ||||||    
T  29051178 aaaagctttttaccaaacacatcacattctatcaaaacaagcttatgagttag 29051230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 75 - 139
Target Start/End: Complemental strand, 43874068 - 43874004
Alignment:
Q  75 actataagctagttgaaaaaactttttatcaaacacatcttattctatcaaaacaagcttataag 139  Q
    |||| ||||||||  |||||  |||||| ||||||||||| ||| ||||||||||||||||||||    
T  43874068 actaaaagctagtgaaaaaagttttttaccaaacacatctcattttatcaaaacaagcttataag 43874004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 133 - 172
Target Start/End: Original strand, 4601037 - 4601076
Alignment:
Q  133 ttataagttagcttatttgtgttaccaaacacaacctaaa 172  Q
    ||||||| |||||||||||||||| |||||||||||||||    
T  4601037 ttataagctagcttatttgtgttatcaaacacaacctaaa 4601076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 76 - 139
Target Start/End: Complemental strand, 12208915 - 12208852
Alignment:
Q  76 ctataagctagttgaaaaaactttttatcaaacacatcttattctatcaaaacaagcttataag 139  Q
    ||||||||||||   |||| ||||||| ||||||| ||| ||| ||||||||||||||||||||    
T  12208915 ctataagctagtgagaaaagctttttaccaaacacgtctcattttatcaaaacaagcttataag 12208852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 76 - 139
Target Start/End: Complemental strand, 12453343 - 12453280
Alignment:
Q  76 ctataagctagttgaaaaaactttttatcaaacacatcttattctatcaaaacaagcttataag 139  Q
    ||||||||||||   |||| ||||||| ||||||| ||| ||| ||||||||||||||||||||    
T  12453343 ctataagctagtgagaaaagctttttaccaaacacgtctcattttatcaaaacaagcttataag 12453280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 91 - 142
Target Start/End: Complemental strand, 26020247 - 26020196
Alignment:
Q  91 aaaaactttttatcaaacacatcttattctatcaaaacaagcttataagtta 142  Q
    ||||||| |||||||||||| ||  |||||||||||| ||||||||||||||    
T  26020247 aaaaactatttatcaaacacgtcccattctatcaaaataagcttataagtta 26020196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 76 - 139
Target Start/End: Original strand, 39104168 - 39104231
Alignment:
Q  76 ctataagctagttgaaaaaactttttatcaaacacatcttattctatcaaaacaagcttataag 139  Q
    ||||||||||||  |||||  |||||| ||||||||||| ||| ||| ||||||||||||||||    
T  39104168 ctataagctagtgaaaaaagttttttaccaaacacatctcattttataaaaacaagcttataag 39104231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 76 - 138
Target Start/End: Original strand, 4477609 - 4477671
Alignment:
Q  76 ctataagctagttgaaaaaactttttatcaaacacatcttattctatcaaaacaagcttataa 138  Q
    ||||||||||||   |||| ||||||||||||||||| | ||| ||||||||||| |||||||    
T  4477609 ctataagctagtgagaaaagctttttatcaaacacatttcattttatcaaaacaaacttataa 4477671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 106 - 139
Target Start/End: Complemental strand, 29725820 - 29725787
Alignment:
Q  106 aacacatcttattctatcaaaacaagcttataag 139  Q
    ||||||||||||| ||||||||||||||||||||    
T  29725820 aacacatcttattatatcaaaacaagcttataag 29725787  T

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Target: chr8; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 134 - 171
Target Start/End: Original strand, 35253098 - 35253135
Alignment:
Q  134 tataagttagcttatttgtgttaccaaacacaacctaa 171  Q
    |||||| |||||| ||||||||||||||||||||||||    
T  35253098 tataagctagcttgtttgtgttaccaaacacaacctaa 35253135  T

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Target: chr8; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 91 - 139
Target Start/End: Complemental strand, 41356384 - 41356336
Alignment:
Q  91 aaaaactttttatcaaacacatcttattctatcaaaacaagcttataag 139  Q
    |||| ||| ||| ||||||||||| ||| ||||||||||||||||||||    
T  41356384 aaaagcttgttaccaaacacatctcattttatcaaaacaagcttataag 41356336  T

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Target: scaffold0009 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 76 - 139
Target Start/End: Original strand, 94394 - 94457
Alignment:
Q  76 ctataagctagttgaaaaaactttttatcaaacacatcttattctatcaaaacaagcttataag 139  Q
    ||||||||||||  ||||| ||||||| ||||||||||||||| |||||||||||| |||||||    
T  94394 ctataagctagtgaaaaaagctttttaccaaacacatcttattatatcaaaacaagtttataag 94457  T

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Target: scaffold0115 (Bit Score: 31; Significance: 0.00000002; HSPs: 4)
Name: scaffold0115
Description:

Target: scaffold0115; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 77 - 139
Target Start/End: Complemental strand, 4257 - 4195
Alignment:
Q  77 tataagctagttgaaaaaactttttatcaaacacatcttattctatcaaaacaagcttataag 139  Q
    |||||||||||   |||| ||||||| ||||||||||| ||| ||| ||||||||||||||||    
T  4257 tataagctagtgagaaaagctttttaccaaacacatctcattttattaaaacaagcttataag 4195  T

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Target: scaffold0115; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 77 - 139
Target Start/End: Complemental strand, 11997 - 11935
Alignment:
Q  77 tataagctagttgaaaaaactttttatcaaacacatcttattctatcaaaacaagcttataag 139  Q
    |||||||||||   |||| ||||||| ||||||||||| ||| ||| ||||||||||||||||    
T  11997 tataagctagtgagaaaagctttttaccaaacacatctcattttattaaaacaagcttataag 11935  T

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Target: scaffold0115; HSP #3
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 134 - 174
Target Start/End: Complemental strand, 4180 - 4140
Alignment:
Q  134 tataagttagcttatttgtgttaccaaacacaacctaaatg 174  Q
    |||||| |||||| |||||||||||||||||| ||||||||    
T  4180 tataagctagcttttttgtgttaccaaacacagcctaaatg 4140  T

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Target: scaffold0115; HSP #4
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 134 - 174
Target Start/End: Complemental strand, 11920 - 11880
Alignment:
Q  134 tataagttagcttatttgtgttaccaaacacaacctaaatg 174  Q
    |||||| |||||| |||||||||||||||||| ||||||||    
T  11920 tataagctagcttttttgtgttaccaaacacagcctaaatg 11880  T

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Target: scaffold0076 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0076
Description:

Target: scaffold0076; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 134 - 170
Target Start/End: Original strand, 14259 - 14295
Alignment:
Q  134 tataagttagcttatttgtgttaccaaacacaaccta 170  Q
    |||||| |||||| |||||||||||||||||||||||    
T  14259 tataagctagcttttttgtgttaccaaacacaaccta 14295  T

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