View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5913-Insertion-1 (Length: 835)
Name: NF5913-Insertion-1
Description: NF5913
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5913-Insertion-1 |
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Alignment Details
Target: chr7 (Bit Score: 365; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 365; E-Value: 0
Query Start/End: Original strand, 9 - 447
Target Start/End: Complemental strand, 45371628 - 45371192
Alignment:
| Q |
9 |
ggactcagattccctgctctaaaaatatctcaccagtaacaagcggtgatcaatttcaggtaatgatttgagaaggggtggcaccagattacacaatcag |
108 |
Q |
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| T |
45371628 |
ggactcagattccctgctctaaaaatatctctccagttacaagcggtgatcaatttcaggtaatgatttgagaaggggtggcaccagattacacaatcag |
45371529 |
T |
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| Q |
109 |
caatttaattccaaattattttgaccattgatttgagatcggacaatcgagatctttaaacgcatatccagcagagaatctaattctatttccaaactta |
208 |
Q |
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| T |
45371528 |
caatttaattccaaattattttgaccattgatttgagatcagacaatcgagatctttaaatgcatatacagcagagaatctaattctatttccaaactta |
45371429 |
T |
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| Q |
209 |
tgcctttacacactcattttgctttccagcaagataagatcctgaggccaccaacagcaagtaactaccagccgaaaat-nnnnnnntgaaaacaaacaa |
307 |
Q |
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| T |
45371428 |
tgcctttacacactcattttgctttccagcaagataagatcctgaggccaccaccagcaagtaactaccagccgaaaataaaaaaaatgaaaaca---aa |
45371332 |
T |
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| Q |
308 |
taactctttattattatgtataaaaaaggatgtaattgattagattccacctttatatgaagtttggttattggattccttattcaaacaaacatctact |
407 |
Q |
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| T |
45371331 |
taactctttattattatgtgtaaaaaaggatgtaattgattagattccacctttatatgaagtttagttattggattccttattcaaacaaacatctact |
45371232 |
T |
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| Q |
408 |
ctacctgcctccaacttgtccaaaatcctccatgtccaac |
447 |
Q |
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| T |
45371231 |
ctacctgcctccaacttgtccaaaatcctccatgtccaac |
45371192 |
T |
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