View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF5913_high_5 (Length: 440)
Name: NF5913_high_5
Description: NF5913
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5913_high_5 |
 | |
|
Alignment Details
Target: chr1 (Bit Score: 406; Significance: 0; HSPs: 31)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 406; E-Value: 0
Query Start/End: Original strand, 13 - 422
Target Start/End: Original strand, 9317820 - 9318229
Alignment:
| Q |
13 |
tgaaggagggttcggttgtgtttataaaggaaatttaattagtggtccatttgtggccataaagatgttgggtaactctaagggtaatgggcaagacttt |
112 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
9317820 |
tgaaggagggttcggttgtgtttataaaggaaatttaattagtggtccatttgtggccataaagatgttgggtaactctaagggtaatgggcaagacttt |
9317919 |
T |
|
| Q |
113 |
attaatgaagttgcaaccataggaagaatacaccatgcaaatgtggttagacttattggtttttgttttgagagatcaaaacgtgcacttgtttatgaat |
212 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
9317920 |
attaatgaagttgcaaccataggaagaatacaccatgcaaatgtggttagacttattggtttttgttttgagagatcaaaacgtgcacttgtttatgaat |
9318019 |
T |
|
| Q |
213 |
tcatgcccaacggctctcttgataaatacatttcctctaaagatgatgttattgatctaacttgcaagaaaatgtatgagatatctcttggagtggctcg |
312 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
9318020 |
tcatgcccaacggctctcttgataaatacatttcctctaaagatgatgttattgatctaacttgcaagaaaatgtatgagatatctcttggagtggctcg |
9318119 |
T |
|
| Q |
313 |
tggaattgcttatttgcatcaaggatgtgacatgcaaatcttgcattttgatatcaagccccataacatccttcttgatgagaactttattcccaaagtt |
412 |
Q |
| |
|
||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
9318120 |
tggaattgcttatttgcatgaaggatgtgacatgcaaatcttgcattttgatatcaagccccataacatccttcttgatgagaactttattcccaaagtt |
9318219 |
T |
|
| Q |
413 |
tcagactttg |
422 |
Q |
| |
|
|||||||||| |
|
|
| T |
9318220 |
tcagactttg |
9318229 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 220; E-Value: 1e-121
Query Start/End: Original strand, 59 - 422
Target Start/End: Complemental strand, 9320436 - 9320073
Alignment:
| Q |
59 |
ccatttgtggccataaagatgttgggtaactctaagggtaatgggcaagactttattaatgaagttgcaaccataggaagaatacaccatgcaaatgtgg |
158 |
Q |
| |
|
||||||||||||||||||||||||||||| |||||||||||||| ||||| || |||| |||||| |||||||||||||||||||| || | ||||||| |
|
|
| T |
9320436 |
ccatttgtggccataaagatgttgggtaaatctaagggtaatggacaagatttcattagtgaagtcgcaaccataggaagaatacatcacaccaatgtgg |
9320337 |
T |
|
| Q |
159 |
ttagacttattggtttttgttttgagagatcaaaacgtgcacttgtttatgaattcatgcccaacggctctcttgataaatacatttcctctaaagatga |
258 |
Q |
| |
|
|| |||||||||| |||||| |||| ||||||| ||||| |||||||||||||||||| |||| ||||||||||||||||| |||||||||| ||| || |
|
|
| T |
9320336 |
ttcgacttattgggttttgtgttgaaggatcaaagcgtgctcttgtttatgaattcatgtccaatggctctcttgataaatatatttcctctagagagga |
9320237 |
T |
|
| Q |
259 |
tgttattgatctaacttgcaagaaaatgtatgagatatctcttggagtggctcgtggaattgcttatttgcatcaaggatgtgacatgcaaatcttgcat |
358 |
Q |
| |
|
| ||| ||||| || ||||||||||||||||||||||||||||||||||||| || |||||||| ||||||||||||||||||||||| |||||| |
|
|
| T |
9320236 |
tactatctctctaaattatcagaaaatgtatgagatatctcttggagtggctcgtggtatggcttatttacatcaaggatgtgacatgcaaattttgcat |
9320137 |
T |
|
| Q |
359 |
tttgatatcaagccccataacatccttcttgatgagaactttattcccaaagtttcagactttg |
422 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |
|
|
| T |
9320136 |
tttgatatcaagccccataacatccttcttgatgagaactttatccccaaagtttcagactttg |
9320073 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 216; E-Value: 1e-118
Query Start/End: Original strand, 59 - 422
Target Start/End: Complemental strand, 9350753 - 9350390
Alignment:
| Q |
59 |
ccatttgtggccataaagatgttgggtaactctaagggtaatgggcaagactttattaatgaagttgcaaccataggaagaatacaccatgcaaatgtgg |
158 |
Q |
| |
|
||||||||||||||||||||||||||||| |||||||||||||| ||||| || |||| |||||| |||||||||||||||||||| || | ||||||| |
|
|
| T |
9350753 |
ccatttgtggccataaagatgttgggtaaatctaagggtaatggacaagatttcattagtgaagtcgcaaccataggaagaatacatcacaccaatgtgg |
9350654 |
T |
|
| Q |
159 |
ttagacttattggtttttgttttgagagatcaaaacgtgcacttgtttatgaattcatgcccaacggctctcttgataaatacatttcctctaaagatga |
258 |
Q |
| |
|
|| |||||||||| |||||| |||| ||||||| ||||| |||||||||||||||||| |||| ||||||||||||||||| |||||||||| ||| || |
|
|
| T |
9350653 |
tttgacttattgggttttgtgttgaaggatcaaagcgtgctcttgtttatgaattcatgtccaatggctctcttgataaatatatttcctctagagagga |
9350554 |
T |
|
| Q |
259 |
tgttattgatctaacttgcaagaaaatgtatgagatatctcttggagtggctcgtggaattgcttatttgcatcaaggatgtgacatgcaaatcttgcat |
358 |
Q |
| |
|
| ||| ||||| || |||||||||||||||||||| |||||||||||||||| || |||||||| ||||||||||||||||||||||| |||||| |
|
|
| T |
9350553 |
tactatctctctaagttatcagaaaatgtatgagatatctgttggagtggctcgtggtatggcttatttacatcaaggatgtgacatgcaaattttgcat |
9350454 |
T |
|
| Q |
359 |
tttgatatcaagccccataacatccttcttgatgagaactttattcccaaagtttcagactttg |
422 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |
|
|
| T |
9350453 |
tttgatatcaagccccataacatccttcttgatgagaactttatccccaaagtttcagactttg |
9350390 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 182; E-Value: 3e-98
Query Start/End: Original strand, 53 - 422
Target Start/End: Original strand, 9254598 - 9254967
Alignment:
| Q |
53 |
agtggtccatttgtggccataaagatgttgggtaactctaagggtaatgggcaagactttattaatgaagttgcaaccataggaagaatacaccatgcaa |
152 |
Q |
| |
|
||||| |||||||| |||||||||||||||| ||| |||||||||||||| || || || |||| |||||| |||||||||||||||||||| || | | |
|
|
| T |
9254598 |
agtgggccatttgttgccataaagatgttggttaaatctaagggtaatggacatgatttcattagtgaagtcgcaaccataggaagaatacatcacacca |
9254697 |
T |
|
| Q |
153 |
atgtggttagacttattggtttttgttttgagagatcaaaacgtgcacttgtttatgaattcatgcccaacggctctcttgataaatacatttcctctaa |
252 |
Q |
| |
|
|||||| | |||||||||| |||||| ||||| ||||||| ||||| |||||||||||||||||| |||| || |||||||||||||| |||||||||| |
|
|
| T |
9254698 |
atgtggctcgacttattgggttttgtgttgagggatcaaagcgtgctcttgtttatgaattcatgtccaatggttctcttgataaatatatttcctctag |
9254797 |
T |
|
| Q |
253 |
agatgatgttattgatctaacttgcaagaaaatgtatgagatatctcttggagtggctcgtggaattgcttatttgcatcaaggatgtgacatgcaaatc |
352 |
Q |
| |
|
||| ||| ||| ||||| || |||||||||| |||||||||||||||||||||| ||| ||||||||||| ||||||||||| || |||||||| |
|
|
| T |
9254798 |
agaggatactatctctctaagttatcagaaaatgtacgagatatctcttggagtggctcatggtattgcttatttacatcaaggatgcgaaatgcaaatt |
9254897 |
T |
|
| Q |
353 |
ttgcattttgatatcaagccccataacatccttcttgatgagaactttattcccaaagtttcagactttg |
422 |
Q |
| |
|
||||||||||| ||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||| |
|
|
| T |
9254898 |
ttgcattttgacatcaagccccataacatccttctcgatgagaactttaaccccaaagtttcagactttg |
9254967 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #5
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 98 - 420
Target Start/End: Complemental strand, 8921191 - 8920869
Alignment:
| Q |
98 |
aatgggcaagactttattaatgaagttgcaaccataggaagaatacaccatgcaaatgtggttagacttattggtttttgttttgagagatcaaaacgtg |
197 |
Q |
| |
|
||||||||||| || ||||||||||||||||||||||||| |||||| || || |||||||| ||||| |||| |||||| ||||| |||||||||||| |
|
|
| T |
8921191 |
aatgggcaagatttcattaatgaagttgcaaccataggaaaaatacatcacgccaatgtggtgcgacttgttggattttgtgttgagggatcaaaacgtg |
8921092 |
T |
|
| Q |
198 |
cacttgtttatgaattcatgcccaacggctctcttgataaatacatttcctctaaagatgatgttattgatctaacttgcaagaaaatgtatgagatatc |
297 |
Q |
| |
|
| ||||||||||| |||||||| || ||||||||||||| ||| |||||||||| ||| ||| ||| |||||| ||| ||||||| |||||||| |
|
|
| T |
8921091 |
ctcttgtttatgatttcatgccaaatggctctcttgatagatatatttcctctagagaagatcacatttccttaacttataagcaaatgtacgagatatc |
8920992 |
T |
|
| Q |
298 |
tcttggagtggctcgtggaattgcttatttgcatcaaggatgtgacatgcaaatcttgcattttgatatcaagccccataacatccttcttgatgagaac |
397 |
Q |
| |
|
||||||||| || |||||||||||||||||||||||||| |||||||||||||| || |||||||| |||||||| |||||||| |||||||| | || |
|
|
| T |
8920991 |
tcttggagttgcacgtggaattgcttatttgcatcaaggctgtgacatgcaaattttacattttgacatcaagcctcataacatacttcttgaccatgac |
8920892 |
T |
|
| Q |
398 |
tttattcccaaagtttcagactt |
420 |
Q |
| |
|
|| || |||||||||||||||| |
|
|
| T |
8920891 |
ttcatcgccaaagtttcagactt |
8920869 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #6
Raw Score: 136; E-Value: 9e-71
Query Start/End: Original strand, 99 - 390
Target Start/End: Complemental strand, 8956517 - 8956226
Alignment:
| Q |
99 |
atgggcaagactttattaatgaagttgcaaccataggaagaatacaccatgcaaatgtggttagacttattggtttttgttttgagagatcaaaacgtgc |
198 |
Q |
| |
|
|||| ||||| || ||||||||||||||||||||||||| |||||| || | |||||||| ||||| |||| ||||| ||||| ||||||||||||| |
|
|
| T |
8956517 |
atggacaagatttcattaatgaagttgcaaccataggaaaaatacatcacaccaatgtggtgcgacttgttggattttgcattgagggatcaaaacgtgc |
8956418 |
T |
|
| Q |
199 |
acttgtttatgaattcatgcccaacggctctcttgataaatacatttcctctaaagatgatgttattgatctaacttgcaagaaaatgtatgagatatct |
298 |
Q |
| |
|
||||||||||| ||||||||||| ||||||||||||| ||| |||||||||| || ||| |||| |||||| ||| ||||||||||||||||| |
|
|
| T |
8956417 |
tcttgtttatgatttcatgcccaatggctctcttgatagatatatttcctctagggaagatcatatttccttaacttataagcaaatgtatgagatatct |
8956318 |
T |
|
| Q |
299 |
cttggagtggctcgtggaattgcttatttgcatcaaggatgtgacatgcaaatcttgcattttgatatcaagccccataacatccttcttga |
390 |
Q |
| |
|
|||||||| || |||||||||||||||||||||||||| |||||||||||||| || ||||||||||||||||| |||||||| |||||||| |
|
|
| T |
8956317 |
cttggagttgcacgtggaattgcttatttgcatcaaggttgtgacatgcaaattttacattttgatatcaagcctcataacattcttcttga |
8956226 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #7
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 98 - 422
Target Start/End: Complemental strand, 8932596 - 8932272
Alignment:
| Q |
98 |
aatgggcaagactttattaatgaagttgcaaccataggaagaatacaccatgcaaatgtggttagacttattggtttttgttttgagagatcaaaacgtg |
197 |
Q |
| |
|
||||| ||||| || |||| |||||||||||| ||||||| |||||| || | |||||||| ||||| |||| |||||| |||||| ||||||||||| |
|
|
| T |
8932596 |
aatggacaagatttcattagtgaagttgcaactataggaaaaatacatcacaccaatgtggtgcgacttgttggattttgtgttgagaaatcaaaacgtg |
8932497 |
T |
|
| Q |
198 |
cacttgtttatgaattcatgcccaacggctctcttgataaatacatttcctctaaagatgatgttattgatctaacttgcaagaaaatgtatgagatatc |
297 |
Q |
| |
|
| ||||||||||| ||||||||||| ||||||||||||| ||| |||||||||| ||| || |||| |||||| ||| ||||||| |||||||| |
|
|
| T |
8932496 |
ctcttgtttatgatttcatgcccaatggctctcttgatagatatatttcctctagagaagaccatatttccttaacttataagcaaatgtacgagatatc |
8932397 |
T |
|
| Q |
298 |
tcttggagtggctcgtggaattgcttatttgcatcaaggatgtgacatgcaaatcttgcattttgatatcaagccccataacatccttcttgatgagaac |
397 |
Q |
| |
|
||||||||| || |||||||||||||||||||||||||| |||||||||||||| || ||||| ||||||||||| |||||||| |||||||| || || |
|
|
| T |
8932396 |
tcttggagttgcacgtggaattgcttatttgcatcaaggttgtgacatgcaaattttacatttcgatatcaagcctcataacatacttcttgaccaggac |
8932297 |
T |
|
| Q |
398 |
tttattcccaaagtttcagactttg |
422 |
Q |
| |
|
|| || ||||||| |||||||||| |
|
|
| T |
8932296 |
ttcatcgccaaagtatcagactttg |
8932272 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #8
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 91 - 390
Target Start/End: Complemental strand, 8942519 - 8942220
Alignment:
| Q |
91 |
taagggtaatgggcaagactttattaatgaagttgcaaccataggaagaatacaccatgcaaatgtggttagacttattggtttttgttttgagagatca |
190 |
Q |
| |
|
|||||| ||||||||||| || || |||||||||||||| |||||||||||||| || | |||||||| |||||||||| |||||| ||||| ||||| |
|
|
| T |
8942519 |
taagggaaatgggcaagatttcatcaatgaagttgcaacaataggaagaatacatcacaccaatgtggtgcgacttattggattttgtgttgagggatca |
8942420 |
T |
|
| Q |
191 |
aaacgtgcacttgtttatgaattcatgcccaacggctctcttgataaatacatttcctctaaagatgatgttattgatctaacttgcaagaaaatgtatg |
290 |
Q |
| |
|
||| | || ||||||||||| ||||||||||| ||||||||||||||||| || || |||| ||| ||| |||| |||||| || |||| |||| |
|
|
| T |
8942419 |
aaaagagctcttgtttatgatttcatgcccaatggctctcttgataaatatatatcatctagagaagatcatatttccttaacttataaacaaatatatg |
8942320 |
T |
|
| Q |
291 |
agatatctcttggagtggctcgtggaattgcttatttgcatcaaggatgtgacatgcaaatcttgcattttgatatcaagccccataacatccttcttga |
390 |
Q |
| |
|
|||||||||||| || || |||||||||||||||||||||||||| |||||||||||||| || ||||||||||||||||| |||||||| |||||||| |
|
|
| T |
8942319 |
agatatctcttgccgttgcacgtggaattgcttatttgcatcaaggttgtgacatgcaaattttacattttgatatcaagcctcataacatacttcttga |
8942220 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #9
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 35 - 422
Target Start/End: Original strand, 9453373 - 9453763
Alignment:
| Q |
35 |
tataaaggaaatttaattagtggtccatttgtggccataaagatgttggg---taactctaagggtaatgggcaagactttattaatgaagttgcaacca |
131 |
Q |
| |
|
|||||||||||| |||| |||||||||||| | ||||||||||||||| ||| || || |||||||||||| || || | |||||||||||||| |
|
|
| T |
9453373 |
tataaaggaaatctaataagtggtccatttatagccataaagatgttgaaaattaaatcaaaaactaatgggcaagatttcataagtgaagttgcaacca |
9453472 |
T |
|
| Q |
132 |
taggaagaatacaccatgcaaatgtggttagacttattggtttttgttttgagagatcaaaacgtgcacttgtttatgaattcatgcccaacggctctct |
231 |
Q |
| |
|
|||| |||||| ||||| |||||||||| ||||| ||||| |||||| | || |||||||||| || |||||||| || | ||||||||| ||||| || |
|
|
| T |
9453473 |
tagggagaatataccattcaaatgtggtaagactcattgggttttgtgtcgaaggatcaaaacgcgctcttgtttacgagtacatgcccaaaggctcact |
9453572 |
T |
|
| Q |
232 |
tgataaatacatttcctctaaagatgatgttattgatctaacttgcaagaaaatgtatgagatatctcttggagtggctcgtggaattgcttatttgcat |
331 |
Q |
| |
|
||||||||| |||| | ||||| | ||||| ||| ||| | | |||| ||||||||||||||||||||||||||||||||| | ||| | ||| |
|
|
| T |
9453573 |
tgataaatatattttcaacaaagagggagttatatctcttactaacgaccaaatatatgagatatctcttggagtggctcgtggaatttcatatcttcat |
9453672 |
T |
|
| Q |
332 |
caaggatgtgacatgcaaatcttgcattttgatatcaagccccataacatccttcttgatgagaactttattcccaaagtttcagactttg |
422 |
Q |
| |
|
||||| ||||| |||||||| |||||||||||||| ||||| || |||||||||||||| || || || || || ||||||||||| |||| |
|
|
| T |
9453673 |
caagggtgtgatatgcaaattttgcattttgatattaagcctcacaacatccttcttgacgaaaatttcatccctaaagtttcagattttg |
9453763 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #10
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 98 - 422
Target Start/End: Original strand, 9485804 - 9486128
Alignment:
| Q |
98 |
aatgggcaagactttattaatgaagttgcaaccataggaagaatacaccatgcaaatgtggttagacttattggtttttgttttgagagatcaaaacgtg |
197 |
Q |
| |
|
||||||||||| || || | |||||||||||| |||||||||||| | ||| |||||||||| ||||| ||||| |||||| | || |||| ||||||| |
|
|
| T |
9485804 |
aatgggcaagatttcataagtgaagttgcaactataggaagaatatatcattcaaatgtggtaagactcattgggttttgtgtcgaaggatcgaaacgtg |
9485903 |
T |
|
| Q |
198 |
cacttgtttatgaattcatgcccaacggctctcttgataaatacatttcctctaaagatgatgttattgatctaacttgcaagaaaatgtatgagatatc |
297 |
Q |
| |
|
| |||||||| || | ||||||||| ||||| ||||||||||| |||| | ||||| | ||||| ||||||| | | |||| ||||||||||| |
|
|
| T |
9485904 |
ctcttgtttacgagtacatgcccaatggctcacttgataaatatattttcaacaaagagggagttatatctctaactaacgaccaaatatatgagatatc |
9486003 |
T |
|
| Q |
298 |
tcttggagtggctcgtggaattgcttatttgcatcaaggatgtgacatgcaaatcttgcattttgatatcaagccccataacatccttcttgatgagaac |
397 |
Q |
| |
|
|||||||||||||||||||||| | ||| | |||||||| |||| |||||||| |||||||||||||| ||||| || ||||| |||||||| || || |
|
|
| T |
9486004 |
tcttggagtggctcgtggaatttcatatcttcatcaaggctgtggtatgcaaattttgcattttgatattaagcctcacaacattcttcttgacgaaaat |
9486103 |
T |
|
| Q |
398 |
tttattcccaaagtttcagactttg |
422 |
Q |
| |
|
||| | || |||||||| ||||||| |
|
|
| T |
9486104 |
tttgtccctaaagtttcggactttg |
9486128 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #11
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 98 - 422
Target Start/End: Complemental strand, 9400127 - 9399803
Alignment:
| Q |
98 |
aatgggcaagactttattaatgaagttgcaaccataggaagaatacaccatgcaaatgtggttagacttattggtttttgttttgagagatcaaaacgtg |
197 |
Q |
| |
|
||||||||||| || || | |||||||||||| |||||||||||| ||||| |||||||||| ||||| || || |||||| | || |||| ||||| | |
|
|
| T |
9400127 |
aatgggcaagatttcataagtgaagttgcaactataggaagaatataccattcaaatgtggtaagactcatagggttttgtgtcgaaggatcgaaacgag |
9400028 |
T |
|
| Q |
198 |
cacttgtttatgaattcatgcccaacggctctcttgataaatacatttcctctaaagatgatgttattgatctaacttgcaagaaaatgtatgagatatc |
297 |
Q |
| |
|
| |||||||| || | ||||||||| ||||| ||||||||||| |||| | ||||| | ||||| ||||||| | | |||| ||||||||||| |
|
|
| T |
9400027 |
ctcttgtttacgagtacatgcccaatggctcacttgataaatatattttcaacaaagagggagttatatctctaactaacgaccaaatatatgagatatc |
9399928 |
T |
|
| Q |
298 |
tcttggagtggctcgtggaattgcttatttgcatcaaggatgtgacatgcaaatcttgcattttgatatcaagccccataacatccttcttgatgagaac |
397 |
Q |
| |
|
|||||||||||||| |||||| | ||| | ||||| || ||||| |||||||| |||||||||||||| ||||| || |||||||||||||| || || |
|
|
| T |
9399927 |
tcttggagtggctcaaggaatttcatatcttcatcagggttgtgatatgcaaattttgcattttgatattaagcctcacaacatccttcttgacgaaaat |
9399828 |
T |
|
| Q |
398 |
tttattcccaaagtttcagactttg |
422 |
Q |
| |
|
|| || || |||||||| ||||||| |
|
|
| T |
9399827 |
ttcatccctaaagtttcggactttg |
9399803 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #12
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 64 - 402
Target Start/End: Original strand, 9104572 - 9104910
Alignment:
| Q |
64 |
tgtggccataaagatgttgggtaactctaagggtaatgggcaagactttattaatgaagttgcaaccataggaagaatacaccatgcaaatgtggttaga |
163 |
Q |
| |
|
|||||| || |||||||||||||| || || |||||||| ||||||||||||| |||||| |||||||| ||||| ||||| ||| ||||| || | | |
|
|
| T |
9104572 |
tgtggcaatcaagatgttgggtaagtcgaaaggtaatggacaagactttattagtgaagtagcaaccattggaaggatacatcatttgaatgtagt-aca |
9104670 |
T |
|
| Q |
164 |
cttatt-ggtttttgttttgagagatcaaaacgtgcacttgtttatgaattcatgcccaacggctctcttgataaatacatttcctctaaagatgatgtt |
262 |
Q |
| |
|
||||| || |||||| ||||| ||||||||||||| |||||||||||||||||||| || || ||||||||||||| |||| ||| ||||| | |
|
|
| T |
9104671 |
attatttggattttgtattgagggatcaaaacgtgctcttgtttatgaattcatgcctaatggatctcttgataaatttattttctccaaagaagggagc |
9104770 |
T |
|
| Q |
263 |
attgatctaacttgcaagaaaatgtatgagatatctcttggagtggctcgtggaattgcttatttgcatcaaggatgtgacatgcaaatcttgcattttg |
362 |
Q |
| |
|
|| || ||| | ||| ||||| || || ||| | ||||||| |||||||| ||||||||| | || || |||||||| ||| | || || ||||||| |
|
|
| T |
9104771 |
ataaatttaagctacaacaaaatttacgatatagcaattggagtagctcgtgggattgcttatcttcaccacggatgtgaaatgaagattttacattttg |
9104870 |
T |
|
| Q |
363 |
atatcaagccccataacatccttcttgatgagaactttat |
402 |
Q |
| |
|
||||||||||||| || ||||||||||||||||||||||| |
|
|
| T |
9104871 |
atatcaagccccacaatatccttcttgatgagaactttat |
9104910 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #13
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 97 - 422
Target Start/End: Original strand, 9432451 - 9432776
Alignment:
| Q |
97 |
taatgggcaagactttattaatgaagttgcaaccataggaagaatacaccatgcaaatgtggttagacttattggtttttgttttgagagatcaaaacgt |
196 |
Q |
| |
|
|||||| ||||| || || | |||||||||||||||||| |||||| ||||| |||||||||| ||||| |||| |||||| | || |||||||||| |
|
|
| T |
9432451 |
taatggccaagatttcataagtgaagttgcaaccatagggagaatataccattcaaatgtggtaagactcgttgggttttgtgtcgaaggatcaaaacgc |
9432550 |
T |
|
| Q |
197 |
gcacttgtttatgaattcatgcccaacggctctcttgataaatacatttcctctaaagatgatgttattgatctaacttgcaagaaaatgtatgagatat |
296 |
Q |
| |
|
|| |||||||| || | ||||||||| ||||| ||||||||||| |||| | ||||| | ||||| |||| || | | |||| |||||||||| |
|
|
| T |
9432551 |
gctcttgtttacgagtacatgcccaatggctcacttgataaatatattttcaacaaagagggagttatatctctatctaacgaccaaatatatgagatat |
9432650 |
T |
|
| Q |
297 |
ctcttggagtggctcgtggaattgcttatttgcatcaaggatgtgacatgcaaatcttgcattttgatatcaagccccataacatccttcttgatgagaa |
396 |
Q |
| |
|
||||||||||||||| ||||||| | ||| | ||||| || ||||| |||||||| |||||||||||||| ||||| || ||||||||||| || || || |
|
|
| T |
9432651 |
ctcttggagtggctcttggaatttcatatcttcatcagggttgtgatatgcaaattttgcattttgatattaagcctcacaacatccttctggacgaaaa |
9432750 |
T |
|
| Q |
397 |
ctttattcccaaagtttcagactttg |
422 |
Q |
| |
|
|| || || |||||||| ||||||| |
|
|
| T |
9432751 |
tttcatccctaaagtttcggactttg |
9432776 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #14
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 64 - 402
Target Start/End: Original strand, 9096390 - 9096728
Alignment:
| Q |
64 |
tgtggccataaagatgttgggtaactctaagggtaatgggcaagactttattaatgaagttgcaaccataggaagaatacaccatgcaaatgtggttaga |
163 |
Q |
| |
|
|||||| || ||| |||||||||| || || |||||||||||||| ||||| |||||||| |||| || ||||||||||| ||| ||||| || | | |
|
|
| T |
9096390 |
tgtggcaatcaagttgttgggtaattcaaaaggtaatgggcaagattttataaatgaagtcacaactattggaagaatacatcatttgaatgtagt-aca |
9096488 |
T |
|
| Q |
164 |
cttatt-ggtttttgttttgagagatcaaaacgtgcacttgtttatgaattcatgcccaacggctctcttgataaatacatttcctctaaagatgatgtt |
262 |
Q |
| |
|
||||| || |||||| ||||| ||||||||||||| |||||||||||||||||||| || || ||||||||||||| |||| ||| ||||| | |
|
|
| T |
9096489 |
attatttggattttgtattgagggatcaaaacgtgctcttgtttatgaattcatgcctaatggatctcttgataaatttattttctccaaagaagggagc |
9096588 |
T |
|
| Q |
263 |
attgatctaacttgcaagaaaatgtatgagatatctcttggagtggctcgtggaattgcttatttgcatcaaggatgtgacatgcaaatcttgcattttg |
362 |
Q |
| |
|
|| || ||| | ||| ||||| || || ||| | ||||||| |||||||| ||||||||| | || || |||||||| ||| | || || ||||||| |
|
|
| T |
9096589 |
ataaatttaagctacaacaaaatttacgatatagcaattggagtagctcgtgggattgcttatcttcaccacggatgtgaaatgaagattttacattttg |
9096688 |
T |
|
| Q |
363 |
atatcaagccccataacatccttcttgatgagaactttat |
402 |
Q |
| |
|
||||||||||||| || ||||||||||||||||||||||| |
|
|
| T |
9096689 |
atatcaagccccacaatatccttcttgatgagaactttat |
9096728 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #15
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 64 - 402
Target Start/End: Original strand, 9082120 - 9082458
Alignment:
| Q |
64 |
tgtggccataaagatgttgggtaactctaagggtaatgggcaagactttattaatgaagttgcaaccataggaagaatacaccatgcaaatgtggttaga |
163 |
Q |
| |
|
|||||| || |||||||||||||| || || |||||||||||||||||||| |||||||| |||| || ||||||||||| ||| ||||| || | | |
|
|
| T |
9082120 |
tgtggcaatcaagatgttgggtaagtcaaaaggtaatgggcaagactttatcaatgaagtcacaactattggaagaatacatcatttgaatgttgt-aca |
9082218 |
T |
|
| Q |
164 |
ctta-ttggtttttgttttgagagatcaaaacgtgcacttgtttatgaattcatgcccaacggctctcttgataaatacatttcctctaaagatgatgtt |
262 |
Q |
| |
|
||| |||| ||||| ||||| |||| |||||||| |||||||||||||||||||| || || ||||||||||||| |||| ||||||||| | |
|
|
| T |
9082219 |
attacttggattttgcattgagggatccaaacgtgctcttgtttatgaattcatgcctaatggatctcttgataaatttattttctctaaagaagggagc |
9082318 |
T |
|
| Q |
263 |
attgatctaacttgcaagaaaatgtatgagatatctcttggagtggctcgtggaattgcttatttgcatcaaggatgtgacatgcaaatcttgcattttg |
362 |
Q |
| |
|
|| || ||| | ||| ||||| || || ||| | ||||||| |||||||| ||||||||| | || || |||||||| ||| | || || ||||||| |
|
|
| T |
9082319 |
ataaatttaagctacaacaaaatttacgatatagcaattggagtagctcgtgggattgcttatcttcaccatggatgtgaaatgaagattttacattttg |
9082418 |
T |
|
| Q |
363 |
atatcaagccccataacatccttcttgatgagaactttat |
402 |
Q |
| |
|
||||||||||||| || ||| | ||||||||||||||||| |
|
|
| T |
9082419 |
atatcaagccccacaatatcttgcttgatgagaactttat |
9082458 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #16
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 64 - 405
Target Start/End: Complemental strand, 9057090 - 9056749
Alignment:
| Q |
64 |
tgtggccataaagatgttgggtaactctaagggtaatgggcaagactttattaatgaagttgcaaccataggaagaatacaccatgcaaatgtggttaga |
163 |
Q |
| |
|
|||||| |||||||||||||| || || || |||||||||||||||||||| |||||||| |||| || ||||||||||| ||| |||||||||| | |
|
|
| T |
9057090 |
tgtggcaataaagatgttgggcaagtccaaaggtaatgggcaagactttatcaatgaagtcacaactattggaagaatacatcatttaaatgtggttcaa |
9056991 |
T |
|
| Q |
164 |
cttattggtttttgttttgagagatcaaaacgtgcacttgtttatgaattcatgcccaacggctctcttgataaatacatttcctctaaagatgatgtta |
263 |
Q |
| |
|
| |||| ||||| ||||| | |||||||| || |||||||||||||| |||| || || |||||||||||||| |||| ||||||||| | || |
|
|
| T |
9056990 |
ttacttggattttgcattgaggggtcaaaacgagctcttgtttatgaatttatgcgtaatggatctcttgataaatatattttctctaaagaagggagta |
9056891 |
T |
|
| Q |
264 |
ttgatctaacttgcaagaaaatgtatgagatatctcttggagtggctcgtggaattgcttatttgcatcaaggatgtgacatgcaaatcttgcattttga |
363 |
Q |
| |
|
| || ||| | ||| || || | || || || ||||||| |||||||| |||| |||| | ||| | |||||||| ||| |||| ||||||||||| |
|
|
| T |
9056890 |
taaatttaagctacaaccaattgcacgatatttcaattggagtagctcgtgggattgattatctccataatggatgtgaaatgaaaattttgcattttga |
9056791 |
T |
|
| Q |
364 |
tatcaagccccataacatccttcttgatgagaactttattcc |
405 |
Q |
| |
|
||||||||| || || ||||| ||||| ||||| |||||||| |
|
|
| T |
9056790 |
tatcaagccacacaatatcctacttgacgagaattttattcc |
9056749 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #17
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 52 - 405
Target Start/End: Original strand, 9142440 - 9142793
Alignment:
| Q |
52 |
tagtggtccatttgtggccataaagatgttgggtaactctaagggtaatgggcaagactttattaatgaagttgcaaccataggaagaatacaccatgca |
151 |
Q |
| |
|
||||||||| | |||||| || |||||| ||||||| || || |||||||||||||| ||||||| ||||||| ||||| ||||||||||| |||| |
|
|
| T |
9142440 |
tagtggtccttgtgtggcaatcaagatgctgggtaagtcaaaaggtaatgggcaagattttattagtgaagttatgaccatcggaagaatacatcatgtg |
9142539 |
T |
|
| Q |
152 |
aatgtggttagacttattggtttttgttttgagagatcaaaacgtgcacttgtttatgaattcatgcccaacggctctcttgataaatacatttcctcta |
251 |
Q |
| |
|
|||||||| | | | | || |||||| ||||| |||||||||| || ||| |||||||||||||| | || || ||||||||||||| |||| ||| | |
|
|
| T |
9142540 |
aatgtggtgaaattactaggattttgtattgagggatcaaaacgcgctcttatttatgaattcatgtcaaatggatctcttgataaatttattttctcaa |
9142639 |
T |
|
| Q |
252 |
aagatgatgttattgatctaacttgcaagaaaatgtatgagatatctcttggagtggctcgtggaattgcttatttgcatcaaggatgtgacatgcaaat |
351 |
Q |
| |
|
|||| | || || || ||| | |||| |||| || || ||||||| ||||| |||||||||||| | || || |||||||| ||| | || |
|
|
| T |
9142640 |
aagaagggagtaaagaattatgttgtagccaaatacatgacatttcaattggagtagctcgaggaattgcttatctccaccatggatgtgaaatgaagat |
9142739 |
T |
|
| Q |
352 |
cttgcattttgatatcaagccccataacatccttcttgatgagaactttattcc |
405 |
Q |
| |
|
|| ||||||||||||||||||||||| || || |||||||||||||||||||| |
|
|
| T |
9142740 |
attacattttgatatcaagccccataatattctgcttgatgagaactttattcc |
9142793 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #18
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 64 - 255
Target Start/End: Complemental strand, 8965041 - 8964850
Alignment:
| Q |
64 |
tgtggccataaagatgttgggtaactctaagggtaatgggcaagactttattaatgaagttgcaaccataggaagaatacaccatgcaaatgtggttaga |
163 |
Q |
| |
|
|||||| || |||||||| ||||| || || ||||||||||| ||||||||||||||||| |||||||| ||||| ||||| ||| |||||||| | |
|
|
| T |
8965041 |
tgtggcaatcaagatgttaggtaaatcaaaaggtaatgggcaggactttattaatgaagtagcaaccattggaaggatacatcatttgaatgtggtgcaa |
8964942 |
T |
|
| Q |
164 |
cttattggtttttgttttgagagatcaaaacgtgcacttgtttatgaattcatgcccaacggctctcttgataaatacatttcctctaaaga |
255 |
Q |
| |
|
| |||||||||||| | ||| ||||||| ||||| |||||||||||||||||| | || || || |||||||||| |||| ||||||||| |
|
|
| T |
8964941 |
ttaattggtttttgtgtcgagggatcaaaccgtgctcttgtttatgaattcatgtctaatggatcccttgataaatttattttctctaaaga |
8964850 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #19
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 52 - 255
Target Start/End: Complemental strand, 9000204 - 9000001
Alignment:
| Q |
52 |
tagtggtccatttgtggccataaagatgttgggtaactctaagggtaatgggcaagactttattaatgaagttgcaaccataggaagaatacaccatgca |
151 |
Q |
| |
|
||||||||| | |||||| ||||||||||||||||| || || ||||||||| |||| ||||||| |||||| ||||||| ||||||||| | ||| |
|
|
| T |
9000204 |
tagtggtccttgtgtggcaataaagatgttgggtaaatcgaaaggtaatgggaaagattttattagtgaagtctcaaccatcggaagaatatatcatttg |
9000105 |
T |
|
| Q |
152 |
aatgtggttagacttattggtttttgttttgagagatcaaaacgtgcacttgtttatgaattcatgcccaacggctctcttgataaatacatttcctcta |
251 |
Q |
| |
|
|||||||| || | |||| |||||| | ||| |||| |||||||| |||||||||||||||||||| || || || |||||||||| |||| ||||| |
|
|
| T |
9000104 |
aatgtggtacgattacttggattttgtatcgagggatcgaaacgtgctcttgtttatgaattcatgcctaatggatcacttgataaatttattttctcta |
9000005 |
T |
|
| Q |
252 |
aaga |
255 |
Q |
| |
|
|||| |
|
|
| T |
9000004 |
aaga |
9000001 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #20
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 300 - 422
Target Start/End: Original strand, 8873885 - 8874007
Alignment:
| Q |
300 |
ttggagtggctcgtggaattgcttatttgcatcaaggatgtgacatgcaaatcttgcattttgatatcaagccccataacatccttcttgatgagaactt |
399 |
Q |
| |
|
||||||| |||||||| ||||||||| | ||||| |||||||| ||| | || |||||||||||||| ||||| || ||||||||||||||||||||||| |
|
|
| T |
8873885 |
ttggagtagctcgtgggattgcttatctccatcatggatgtgaaatgaagattttgcattttgatattaagcctcacaacatccttcttgatgagaactt |
8873984 |
T |
|
| Q |
400 |
tattcccaaagtttcagactttg |
422 |
Q |
| |
|
|| ||| ||||| || ||||||| |
|
|
| T |
8873985 |
tactccgaaagtctctgactttg |
8874007 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #21
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 300 - 399
Target Start/End: Complemental strand, 8999956 - 8999857
Alignment:
| Q |
300 |
ttggagtggctcgtggaattgcttatttgcatcaaggatgtgacatgcaaatcttgcattttgatatcaagccccataacatccttcttgatgagaactt |
399 |
Q |
| |
|
||||||| |||||||| ||||||||| | || || ||||| || ||| | || || ||||||||||||||||| || ||||||||||||||||| ||||| |
|
|
| T |
8999956 |
ttggagtagctcgtgggattgcttatctccaccatggatgcgaaatgaagattttacattttgatatcaagcctcacaacatccttcttgatgaaaactt |
8999857 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #22
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 116 - 245
Target Start/End: Complemental strand, 9464595 - 9464466
Alignment:
| Q |
116 |
aatgaagttgcaaccataggaagaatacaccatgcaaatgtggttagacttattggtttttgttttgagagatcaaaacgtgcacttgtttatgaattca |
215 |
Q |
| |
|
||||||||||| ||||| |||| || ||||||| ||||||||| || ||||| |||||| |||||| | ||||| | |||||||||||||| |||| |
|
|
| T |
9464595 |
aatgaagttgctaccattggaacgattcaccatgttaatgtggttcacctaattggcttttgtgttgagaaaacaaaaagagcacttgtttatgagttca |
9464496 |
T |
|
| Q |
216 |
tgcccaacggctctcttgataaatacattt |
245 |
Q |
| |
|
|||| |||| |||||||| ||| |||||| |
|
|
| T |
9464495 |
tgcctaacgattctcttgaaaaacacattt |
9464466 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 308 - 396
Target Start/End: Complemental strand, 8964797 - 8964709
Alignment:
| Q |
308 |
gctcgtggaattgcttatttgcatcaaggatgtgacatgcaaatcttgcattttgatatcaagccccataacatccttcttgatgagaa |
396 |
Q |
| |
|
|||||||| ||||||||| | || || ||||| || ||| | || |||||||||||||| ||||| || |||||||||||||||||||| |
|
|
| T |
8964797 |
gctcgtgggattgcttatcttcaccatggatgcgaaatgaagattttgcattttgatattaagcctcacaacatccttcttgatgagaa |
8964709 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 287 - 387
Target Start/End: Complemental strand, 9384531 - 9384431
Alignment:
| Q |
287 |
tatgagatatctcttggagtggctcgtggaattgcttatttgcatcaaggatgtgacatgcaaatcttgcattttgatatcaagccccataacatccttc |
386 |
Q |
| |
|
||||| |||||||| ||| | |||||||| || | ||| |||||||||||||||| |||||||| | ||||||||||||||||| ||||| || |||| |
|
|
| T |
9384531 |
tatgaaatatctctcggaatagctcgtgggatagaatatctgcatcaaggatgtgatatgcaaattctacattttgatatcaagcctcataatattcttc |
9384432 |
T |
|
| Q |
387 |
t |
387 |
Q |
| |
|
| |
|
|
| T |
9384431 |
t |
9384431 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #25
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 64 - 219
Target Start/End: Original strand, 8873649 - 8873804
Alignment:
| Q |
64 |
tgtggccataaagatgttgggtaactctaagggtaatgggcaagactttattaatgaagttgcaaccataggaagaatacaccatgcaaatgtggttaga |
163 |
Q |
| |
|
|||||| || |||||||||||||| || || ||||| |||| ||||||||| | |||||| |||||||| || |||||||| ||| |||||||| | |
|
|
| T |
8873649 |
tgtggcaatcaagatgttgggtaaatcaaaaggtaacgggcgagactttataagtgaagtagcaaccattgggagaatacatcatttgaatgtggtgcaa |
8873748 |
T |
|
| Q |
164 |
cttattggtttttgttttgagagatcaaaacgtgcacttgtttatgaattcatgcc |
219 |
Q |
| |
|
| ||||| ||||| ||| ||||||||||||| ||||||||||| || ||||| |
|
|
| T |
8873749 |
ttaattggattttgcaccgagggatcaaaacgtgctcttgtttatgagtttatgcc |
8873804 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #26
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 359 - 414
Target Start/End: Original strand, 11028483 - 11028538
Alignment:
| Q |
359 |
tttgatatcaagccccataacatccttcttgatgagaactttattcccaaagtttc |
414 |
Q |
| |
|
|||||||| ||||| ||||||||||||||||||||||| |||| ||| |||||||| |
|
|
| T |
11028483 |
tttgatataaagcctcataacatccttcttgatgagaattttaatccaaaagtttc |
11028538 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 296 - 414
Target Start/End: Complemental strand, 11011187 - 11011069
Alignment:
| Q |
296 |
tctcttggagtggctcgtggaattgcttatttgcatcaaggatgtgacatgcaaatcttgcattttgatatcaagccccataacatccttcttgatgaga |
395 |
Q |
| |
|
|||||||||||||||||||| |||| || |||||||| ||||| | ||| |||| | || |||||||| ||||| |||||||| ||||||||||| | |
|
|
| T |
11011187 |
tctcttggagtggctcgtggcattgagtacttgcatcatggatgcaatatgaaaattctacactttgatataaagcctcataacattcttcttgatgaaa |
11011088 |
T |
|
| Q |
396 |
actttattcccaaagtttc |
414 |
Q |
| |
|
| || | ||| |||||||| |
|
|
| T |
11011087 |
atttcaatccaaaagtttc |
11011069 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #28
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 296 - 393
Target Start/End: Complemental strand, 10974543 - 10974446
Alignment:
| Q |
296 |
tctcttggagtggctcgtggaattgcttatttgcatcaaggatgtgacatgcaaatcttgcattttgatatcaagccccataacatccttcttgatga |
393 |
Q |
| |
|
|||||||| |||||||||||||||| || || ||| | |||||||| ||| |||| | || |||||||| ||||| |||| ||||||||||||||| |
|
|
| T |
10974543 |
tctcttggggtggctcgtggaattgagtactttcataatggatgtgatatgaaaattctacactttgatataaagcctcataccatccttcttgatga |
10974446 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 279 - 387
Target Start/End: Original strand, 9233855 - 9233963
Alignment:
| Q |
279 |
agaaaatgtatgagatatctcttggagtggctcgtggaattgcttatttgcatcaaggatgtgacatgcaaatcttgcattttgatatcaagccccataa |
378 |
Q |
| |
|
||||||| ||||| |||| ||| ||| | |||||||| || | ||| |||||||||| ||||| |||||||| | ||||||||||||||||| ||||| |
|
|
| T |
9233855 |
agaaaatatatgaaatatgtctcggaatagctcgtgggatagagtatctgcatcaaggttgtgatatgcaaattctacattttgatatcaagcctcataa |
9233954 |
T |
|
| Q |
379 |
catccttct |
387 |
Q |
| |
|
|| ||||| |
|
|
| T |
9233955 |
tattcttct |
9233963 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 296 - 396
Target Start/End: Complemental strand, 11033478 - 11033378
Alignment:
| Q |
296 |
tctcttggagtggctcgtggaattgcttatttgcatcaaggatgtgacatgcaaatcttgcattttgatatcaagccccataacatccttcttgatgaga |
395 |
Q |
| |
|
||||||||||||||||| || |||| || |||||| | ||||| || ||| |||| | || ||||| || ||||| |||||||||||||||||||||| |
|
|
| T |
11033478 |
tctcttggagtggctcgaggcattgagtacttgcataatggatgcgatatgaaaattctacactttgacataaagcctcataacatccttcttgatgaga |
11033379 |
T |
|
| Q |
396 |
a |
396 |
Q |
| |
|
| |
|
|
| T |
11033378 |
a |
11033378 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #31
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 97 - 149
Target Start/End: Complemental strand, 9384721 - 9384669
Alignment:
| Q |
97 |
taatgggcaagactttattaatgaagttgcaaccataggaagaatacaccatg |
149 |
Q |
| |
|
|||||| ||||| |||||||| |||||||| ||||| ||||||||||| |||| |
|
|
| T |
9384721 |
taatggacaagattttattaacgaagttgcgaccattggaagaatacatcatg |
9384669 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 290; Significance: 1e-162; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 290; E-Value: 1e-162
Query Start/End: Original strand, 13 - 422
Target Start/End: Complemental strand, 9160172 - 9159763
Alignment:
| Q |
13 |
tgaaggagggttcggttgtgtttataaaggaaatttaattagtggtccatttgtggccataaagatgttgggtaactctaagggtaatgggcaagacttt |
112 |
Q |
| |
|
|||||||||||| |||| ||||||||||||||| |||| |||||| ||||||| |||||||||||||||||||| |||||||||||||| ||||| || |
|
|
| T |
9160172 |
tgaaggagggtttggttctgtttataaaggaaagttaagaagtggtgcatttgttgccataaagatgttgggtaagtctaagggtaatggacaagatttc |
9160073 |
T |
|
| Q |
113 |
attaatgaagttgcaaccataggaagaatacaccatgcaaatgtggttagacttattggtttttgttttgagagatcaaaacgtgcacttgtttatgaat |
212 |
Q |
| |
|
|||| ||| |||||||| ||||||||||||||||||||||||||||| ||||||||||| |||||| | |||||||||||| || | ||||||||||||| |
|
|
| T |
9160072 |
attagtgaggttgcaactataggaagaatacaccatgcaaatgtggtaagacttattggattttgtgtggagagatcaaaatgtactcttgtttatgaat |
9159973 |
T |
|
| Q |
213 |
tcatgcccaacggctctcttgataaatacatttcctctaaagatgatgttattgatctaacttgcaagaaaatgtatgagatatctcttggagtggctcg |
312 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||| ||||||||||||| |
|
|
| T |
9159972 |
tcatgcccaacggctctcttgataaatacatttcctctaaagatgatgttattaatctaacttataagaaaatgtatgagatatctattggagtggctcg |
9159873 |
T |
|
| Q |
313 |
tggaattgcttatttgcatcaaggatgtgacatgcaaatcttgcattttgatatcaagccccataacatccttcttgatgagaactttattcccaaagtt |
412 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||| ||||| ||| |
|
|
| T |
9159872 |
tggaattgcttatttgcatcaaggatgtgacatgcaaatcttgcattttgatatcaagccccataacatacttcttgacgagaactttatccccaaggtt |
9159773 |
T |
|
| Q |
413 |
tcagactttg |
422 |
Q |
| |
|
|| ||||||| |
|
|
| T |
9159772 |
tctgactttg |
9159763 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 200; Significance: 1e-109; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 200; E-Value: 1e-109
Query Start/End: Original strand, 59 - 422
Target Start/End: Original strand, 15926772 - 15927135
Alignment:
| Q |
59 |
ccatttgtggccataaagatgttgggtaactctaagggtaatgggcaagactttattaatgaagttgcaaccataggaagaatacaccatgcaaatgtgg |
158 |
Q |
| |
|
||||||||||||||||||||||||||||| |||||| | ||||| ||||| |||||||||||||| |||||||||||||||||||| || | ||||| | |
|
|
| T |
15926772 |
ccatttgtggccataaagatgttgggtaaatctaagagcaatggacaagattttattaatgaagtggcaaccataggaagaatacatcacaccaatgtag |
15926871 |
T |
|
| Q |
159 |
ttagacttattggtttttgttttgagagatcaaaacgtgcacttgtttatgaattcatgcccaacggctctcttgataaatacatttcctctaaagatga |
258 |
Q |
| |
|
|| |||||||||| |||||| ||||| ||||||| ||||| ||||||||||||||||||||||| || |||||||||||||| ||||| |||| || || |
|
|
| T |
15926872 |
ttcgacttattggattttgtgttgagggatcaaagcgtgctcttgtttatgaattcatgcccaatggttctcttgataaatatatttcttctagcgagga |
15926971 |
T |
|
| Q |
259 |
tgttattgatctaacttgcaagaaaatgtatgagatatctcttggagtggctcgtggaattgcttatttgcatcaaggatgtgacatgcaaatcttgcat |
358 |
Q |
| |
|
|| ||| |||||||| ||| ||||||||||||||||||||||||| |||||||| || ||||| || |||||||||||| |||||||||| |||||| |
|
|
| T |
15926972 |
tgctatctctctaacttataagcaaatgtatgagatatctcttggagttgctcgtggtatggcttacttacatcaaggatgtaacatgcaaattttgcat |
15927071 |
T |
|
| Q |
359 |
tttgatatcaagccccataacatccttcttgatgagaactttattcccaaagtttcagactttg |
422 |
Q |
| |
|
||||| |||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||| |
|
|
| T |
15927072 |
tttgacatcaagccccataacatccttcttgatgagaactttatccccaaagtttccgactttg |
15927135 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 329 - 396
Target Start/End: Complemental strand, 27692684 - 27692617
Alignment:
| Q |
329 |
catcaaggatgtgacatgcaaatcttgcattttgatatcaagccccataacatccttcttgatgagaa |
396 |
Q |
| |
|
|||||||| ||||||||||||||| | || |||||||| || || |||||||| |||||||| ||||| |
|
|
| T |
27692684 |
catcaaggttgtgacatgcaaatcatacactttgatataaaacctcataacattcttcttgacgagaa |
27692617 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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