View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF5914-Insertion-3 (Length: 831)
Name: NF5914-Insertion-3
Description: NF5914
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5914-Insertion-3 |
 | |
|
Alignment Details
Target: chr4 (Bit Score: 774; Significance: 0; HSPs: 5)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 774; E-Value: 0
Query Start/End: Original strand, 9 - 830
Target Start/End: Original strand, 2886153 - 2886974
Alignment:
| Q |
9 |
ggagcgttaacaggatttgtgtttcttttcaacatattattcactgtggctctcacttaccttgatcgtgagtaccttcgtttattgttatttaagtttc |
108 |
Q |
| |
|
||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
2886153 |
ggagcattaacaggatttatgtttcttttcaacatattattcactgtggctctcacttaccttgatcgtgagtaccttcgtttattgttatttaagtttc |
2886252 |
T |
|
| Q |
109 |
ttatgcttatgcacacatttcattaactaacatgcatgatttttacagcatttgacaagccacaagcaacaataaatgaagaatcagaagacagcacaac |
208 |
Q |
| |
|
|||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
2886253 |
ttatgcttatgcgcacatttcataaactaacatgcatgatttttacagcatttgacaagccacaagcaacaataaatgaagaatcagaagacagcacaac |
2886352 |
T |
|
| Q |
209 |
aaatggcactacccaagaagttgaattaccgcgtataggtgatctatctttttcataccactcgtgaaaactcaatataaacatgctacttttatgtgtt |
308 |
Q |
| |
|
|||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
2886353 |
aaatggcactacccaagaagttgaattaccacgtataggtgatctatctttttcataccactcgtgaaaactcaatataaacatgctacttttatgtgtt |
2886452 |
T |
|
| Q |
309 |
tgaactagttcattagtgatttataatgcattttgattttatttaatattatttgggtgtagtcttgattattgttagggctgggatctcagttttctat |
408 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
2886453 |
tgaactagttcattagtgatttataatgcattttgattttatttaatattatttgggtgtagtcttgattattgttagggctgggatctcagttttctat |
2886552 |
T |
|
| Q |
409 |
aatgatgttctttcatgcctcataatggctttagaatcttaacatatttgcagttgttatgcagcaagttcaggaggatcacatggtgcggaccccagcc |
508 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||| |||| |
|
|
| T |
2886553 |
aatgatgttctttcatgcctcataatggctttagaatcttaacatatttgcaattgttatgcagcaagttcaggaggatcaaatggtgcggaccctagcc |
2886652 |
T |
|
| Q |
509 |
aaagagagagaagaggaatggttcttccttttgaaccacattctatagcctttgacgatgttgtatattctgttgacatgccacaggtaagtgagattat |
608 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
2886653 |
aaagagagagaagaggaatggttcttccttttgaaccacattctatagcctttgacgatgttgtatattctgttgacatgccacaggtaagtgagattat |
2886752 |
T |
|
| Q |
609 |
aaaagtttattacaatttaagatttggttttcaaacaatgtttttagttaactttggaccttaactcttgagattctaattggcaggaaatgaaggttca |
708 |
Q |
| |
|
|||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
2886753 |
aaaagttttttacaatttaagatttggttttcaaacaatgtttttagttaactttggaccttaactcttgagattctaattggcaggaaatgaaggttca |
2886852 |
T |
|
| Q |
709 |
aggggtagtagaggatagattagtacttttgaagggtgttagtggtgcatttaggcctggtgttctcactgccctaatgggagttagtggagctggtaaa |
808 |
Q |
| |
|
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||| |
|
|
| T |
2886853 |
aggggtactagaggatagattagtacttttgaagggtgttagtggtgcatttaggcctggtgttctcacagccttaatgggagttagtggagctggtaaa |
2886952 |
T |
|
| Q |
809 |
actactttaatggatgttttgg |
830 |
Q |
| |
|
|||||||||||||||||||||| |
|
|
| T |
2886953 |
actactttaatggatgttttgg |
2886974 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 191; E-Value: 1e-103
Query Start/End: Original strand, 428 - 830
Target Start/End: Complemental strand, 2897800 - 2897402
Alignment:
| Q |
428 |
tcataatggctttagaatcttaacata-tttgcagttgttatgcagcaagttcaggaggatcacatggtgcggaccccagccaaagagagagaagaggaa |
526 |
Q |
| |
|
|||||||| |||||||||||||||| | ||| || |||||| ||||| |||| ||||| || ||| || | | ||||| | ||| ||| ||| |||| |
|
|
| T |
2897800 |
tcataatgtctttagaatcttaacaaaatttccaattgttacgcagctagtttaggagaat---atgttgtgagctccagcaacagaaagaaaaggggaa |
2897704 |
T |
|
| Q |
527 |
tggttcttccttttgaaccacattctatagcctttgacgatgttgtatattctgttgacatgccacaggtaagtgagattataaaagtttattacaattt |
626 |
Q |
| |
|
|| |||||||||||||||||||||||||| ||||||| | ||||||||||| ||||||||||||||||||||| | || | ||||| ||| |||| |
|
|
| T |
2897703 |
tgattcttccttttgaaccacattctataatctttgaccaagttgtatattcagttgacatgccacaggtaagtca--ttttcaaagtaagttataattg |
2897606 |
T |
|
| Q |
627 |
aagatttggttttcaaacaatgtttttagttaactttggaccttaactcttgagattctaattggcaggaaatgaaggttcaaggggtagtagaggatag |
726 |
Q |
| |
|
|||||||| |||||||||||||| || ||||||||||| ||||||||| ||||| ||||| || |||||||||||||||||||| |||||||||||||| |
|
|
| T |
2897605 |
aagatttgattttcaaacaatgtgttcagttaactttgaaccttaactattgagtatctaaatgacaggaaatgaaggttcaaggtgtagtagaggatag |
2897506 |
T |
|
| Q |
727 |
attagtacttttgaagggtgttagtggtgcatttaggcctggtgttctcactgccctaatgggagttagtggagctggtaaaactactttaatggatgtt |
826 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
2897505 |
attagtacttttgaagggtgttagtggtgcatttaggcctggtgttctcacagcattaatgggagttagtggagctggtaaaactactttaatggatgtt |
2897406 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 182; E-Value: 6e-98
Query Start/End: Original strand, 9 - 294
Target Start/End: Complemental strand, 2898267 - 2897983
Alignment:
| Q |
9 |
ggagcgttaacaggatttgtgtttcttttcaacatattattcactgtggctctcacttaccttgatcgtgagtaccttcgtttattgttatttaagtttc |
108 |
Q |
| |
|
||||| |||||||||||| |||||||||||||||||||||||||| ||||||||||| ||||| ||||||||||| ||| ||| ||| |||||||||||| |
|
|
| T |
2898267 |
ggagcattaacaggatttatgtttcttttcaacatattattcactatggctctcactcaccttaatcgtgagtacattcattt-ttggtatttaagtttc |
2898169 |
T |
|
| Q |
109 |
ttatgcttatgcacacatttcattaactaacatgcatgatttttacagcatttgacaagccacaagcaacaataaatgaagaatcagaagacagcacaac |
208 |
Q |
| |
|
||||| ||||||| | || |||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||| |
|
|
| T |
2898168 |
ttatggttatgcaaatatgccattgactaacatgcatgatttttacagcatttgacaagccacaagcaaaaataaatgaagaatcagaagacagcataac |
2898069 |
T |
|
| Q |
209 |
aaatggcactacccaagaagttgaattaccgcgtataggtgatctatctttttcataccactcgtgaaaactcaatataaacatgc |
294 |
Q |
| |
|
|||||||||| ||||||||||||||||||||| |||||| || ||||||||||||||| || |||||||||||||||||||||| |
|
|
| T |
2898068 |
aaatggcactctccaagaagttgaattaccgcgcataggttatgaatctttttcataccattcatgaaaactcaatataaacatgc |
2897983 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 689 - 830
Target Start/End: Original strand, 2877066 - 2877207
Alignment:
| Q |
689 |
tggcaggaaatgaaggttcaaggggtagtagaggatagattagtacttttgaagggtgttagtggtgcatttaggcctggtgttctcactgccctaatgg |
788 |
Q |
| |
|
|||||||||||||| | |||||| || |||||||||| |||| ||||||||||| ||||||||||||||||| |||||||||||||| || | |||| |
|
|
| T |
2877066 |
tggcaggaaatgaaagatcaaggtgtgatagaggataggctagtgcttttgaagggagttagtggtgcatttagacctggtgttctcacagctttgatgg |
2877165 |
T |
|
| Q |
789 |
gagttagtggagctggtaaaactactttaatggatgttttgg |
830 |
Q |
| |
|
| |||||||||||||||||||||||||| |||||||| |||| |
|
|
| T |
2877166 |
gtgttagtggagctggtaaaactactttgatggatgtattgg |
2877207 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 523 - 600
Target Start/End: Original strand, 2876662 - 2876739
Alignment:
| Q |
523 |
ggaatggttcttccttttgaaccacattctatagcctttgacgatgttgtatattctgttgacatgccacaggtaagt |
600 |
Q |
| |
|
||||||||||| |||||||||||| ||||||| | |||||||| ||||||| ||||||||| ||||||| |||||| |
|
|
| T |
2876662 |
ggaatggttctaccttttgaaccatattctatcacatttgacgaaattgtatactctgttgacgtgccacaagtaagt |
2876739 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 58; Significance: 6e-24; HSPs: 7)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 689 - 826
Target Start/End: Complemental strand, 44223465 - 44223328
Alignment:
| Q |
689 |
tggcaggaaatgaaggttcaaggggtagtagaggatagattagtacttttgaagggtgttagtggtgcatttaggcctggtgttctcactgccctaatgg |
788 |
Q |
| |
|
|||||||||||||||| ||||| || ||| || |||||||| |||||||||||||||||||||||||| ||||| ||||||||||| || | |||| |
|
|
| T |
44223465 |
tggcaggaaatgaaggagcaaggtgttagagaagacagattagtgcttttgaagggtgttagtggtgcattcaggcccggtgttctcacagctttgatgg |
44223366 |
T |
|
| Q |
789 |
gagttagtggagctggtaaaactactttaatggatgtt |
826 |
Q |
| |
|
| || ||||||||||||||||| ||| | ||||||||| |
|
|
| T |
44223365 |
gtgtaagtggagctggtaaaacaactctgatggatgtt |
44223328 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 689 - 826
Target Start/End: Complemental strand, 44211303 - 44211166
Alignment:
| Q |
689 |
tggcaggaaatgaaggttcaaggggtagtagaggatagattagtacttttgaagggtgttagtggtgcatttaggcctggtgttctcactgccctaatgg |
788 |
Q |
| |
|
|||||||||||||||| ||||| || |||||| ||| |||| ||||||||||||||||| |||||||| ||||| ||||||||||| || | |||| |
|
|
| T |
44211303 |
tggcaggaaatgaaggagcaaggtgttacagaggacagactagtgcttttgaagggtgttagcggtgcattcaggcccggtgttctcacagctttgatgg |
44211204 |
T |
|
| Q |
789 |
gagttagtggagctggtaaaactactttaatggatgtt |
826 |
Q |
| |
|
| || ||||||||||||||||| ||| | ||||||||| |
|
|
| T |
44211203 |
gtgtaagtggagctggtaaaacaactctgatggatgtt |
44211166 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 689 - 826
Target Start/End: Complemental strand, 44234287 - 44234150
Alignment:
| Q |
689 |
tggcaggaaatgaaggttcaaggggtagtagaggatagattagtacttttgaagggtgttagtggtgcatttaggcctggtgttctcactgccctaatgg |
788 |
Q |
| |
|
|||||||||||||||| ||||| || |||||| |||||||| |||||||||||||||||||| ||||| ||||||||||| || || || | |||| |
|
|
| T |
44234287 |
tggcaggaaatgaaggagcaaggtgttacagaggacagattagtgcttttgaagggtgttagtggcgcattcaggcctggtgtacttacggctttgatgg |
44234188 |
T |
|
| Q |
789 |
gagttagtggagctggtaaaactactttaatggatgtt |
826 |
Q |
| |
|
| || ||||||||||||||||| ||| | ||||||||| |
|
|
| T |
44234187 |
gtgtaagtggagctggtaaaacaactctgatggatgtt |
44234150 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 523 - 591
Target Start/End: Complemental strand, 44211476 - 44211408
Alignment:
| Q |
523 |
ggaatggttcttccttttgaaccacattctatagcctttgacgatgttgtatattctgttgacatgcca |
591 |
Q |
| |
|
|||||||||||||| ||||||||||||||||| | ||||| ||| ||||||| ||||||||||||||| |
|
|
| T |
44211476 |
ggaatggttcttccatttgaaccacattctatcacttttgatgatattgtatactctgttgacatgcca |
44211408 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #5
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 523 - 591
Target Start/End: Complemental strand, 44234460 - 44234392
Alignment:
| Q |
523 |
ggaatggttcttccttttgaaccacattctatagcctttgacgatgttgtatattctgttgacatgcca |
591 |
Q |
| |
|
|||||||||||||| ||||||||||||||||| | ||||| ||| ||||||| ||||||||||||||| |
|
|
| T |
44234460 |
ggaatggttcttccatttgaaccacattctatcacttttgatgatattgtatactctgttgacatgcca |
44234392 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #6
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 751 - 828
Target Start/End: Complemental strand, 43457796 - 43457719
Alignment:
| Q |
751 |
tggtgcatttaggcctggtgttctcactgccctaatgggagttagtggagctggtaaaactactttaatggatgtttt |
828 |
Q |
| |
|
||||||||| |||||||| ||||| || || |||||||||||||||||||||| || || ||||| ||||||||||| |
|
|
| T |
43457796 |
tggtgcattcaggcctggagttctaacggctttaatgggagttagtggagctggaaagacaactttgatggatgtttt |
43457719 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #7
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 523 - 591
Target Start/End: Complemental strand, 44223638 - 44223570
Alignment:
| Q |
523 |
ggaatggttcttccttttgaaccacattctatagcctttgacgatgttgtatattctgttgacatgcca |
591 |
Q |
| |
|
|||||||||||||| ||||||||||||||||| | ||||| ||| ||||||| |||||||| |||||| |
|
|
| T |
44223638 |
ggaatggttcttccatttgaaccacattctatcacttttgatgatattgtatactctgttgatatgcca |
44223570 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 52; Significance: 2e-20; HSPs: 10)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 523 - 598
Target Start/End: Original strand, 39337959 - 39338034
Alignment:
| Q |
523 |
ggaatggttcttccttttgaaccacattctatagcctttgacgatgttgtatattctgttgacatgccacaggtaa |
598 |
Q |
| |
|
||||||||||||||||||||||||||||||||| ||||||| || ||| ||||||||| |||||||||||||||| |
|
|
| T |
39337959 |
ggaatggttcttccttttgaaccacattctataacctttgatgaagttacatattctgtagacatgccacaggtaa |
39338034 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 523 - 598
Target Start/End: Complemental strand, 39564879 - 39564804
Alignment:
| Q |
523 |
ggaatggttcttccttttgaaccacattctatagcctttgacgatgttgtatattctgttgacatgccacaggtaa |
598 |
Q |
| |
|
||||||||||||||||||||||||||||||||| ||||||| || ||| |||||| || |||||||||||||||| |
|
|
| T |
39564879 |
ggaatggttcttccttttgaaccacattctataacctttgatgaagttacatattccgtagacatgccacaggtaa |
39564804 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 523 - 598
Target Start/End: Original strand, 39349136 - 39349211
Alignment:
| Q |
523 |
ggaatggttcttccttttgaaccacattctatagcctttgacgatgttgtatattctgttgacatgccacaggtaa |
598 |
Q |
| |
|
||||||||||||||||||||||||||||||||| ||||||| || ||| ||||||| | |||||||| ||||||| |
|
|
| T |
39349136 |
ggaatggttcttccttttgaaccacattctataacctttgatgaagttacatattctatagacatgccgcaggtaa |
39349211 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 519 - 598
Target Start/End: Original strand, 39365605 - 39365684
Alignment:
| Q |
519 |
aagaggaatggttcttccttttgaaccacattctatagcctttgacgatgttgtatattctgttgacatgccacaggtaa |
598 |
Q |
| |
|
|||||||||||||||||| |||||||||||||| || ||||||| || ||| ||||||||| |||||||||||||||| |
|
|
| T |
39365605 |
aagaggaatggttcttccatttgaaccacattcaatcacctttgatgaagtttcatattctgtagacatgccacaggtaa |
39365684 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 519 - 598
Target Start/End: Complemental strand, 39538665 - 39538586
Alignment:
| Q |
519 |
aagaggaatggttcttccttttgaaccacattctatagcctttgacgatgttgtatattctgttgacatgccacaggtaa |
598 |
Q |
| |
|
|||||||||||||||||| |||||||||||||| || ||||||| || ||| ||||||||| |||||||||||||||| |
|
|
| T |
39538665 |
aagaggaatggttcttccatttgaaccacattcaatcacctttgatgaagtttcatattctgtagacatgccacaggtaa |
39538586 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 519 - 596
Target Start/End: Complemental strand, 39548029 - 39547952
Alignment:
| Q |
519 |
aagaggaatggttcttccttttgaaccacattctatagcctttgacgatgttgtatattctgttgacatgccacaggt |
596 |
Q |
| |
|
||||||||||||||| ||||||||||||||||| || ||||||| || ||| ||||||||| |||||||||||||| |
|
|
| T |
39548029 |
aagaggaatggttctcccttttgaaccacattcaatcacctttgatgaagttacatattctgtagacatgccacaggt |
39547952 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 519 - 598
Target Start/End: Complemental strand, 39589774 - 39589695
Alignment:
| Q |
519 |
aagaggaatggttcttccttttgaaccacattctatagcctttgacgatgttgtatattctgttgacatgccacaggtaa |
598 |
Q |
| |
|
|||||||||||||||||||||||||||||||| | | ||||||| || || ||||||||| |||||||||||||||| |
|
|
| T |
39589774 |
aagaggaatggttcttccttttgaaccacattgtgtcacctttgatgaagtaacatattctgtagacatgccacaggtaa |
39589695 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #8
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 521 - 590
Target Start/End: Complemental strand, 39575535 - 39575466
Alignment:
| Q |
521 |
gaggaatggttcttccttttgaaccacattctatagcctttgacgatgttgtatattctgttgacatgcc |
590 |
Q |
| |
|
|||||||||||||||||||||||| |||||||||| ||||||| || || ||||||||| |||||||| |
|
|
| T |
39575535 |
gaggaatggttcttccttttgaacaacattctataacctttgatgaagtaacatattctgtcgacatgcc |
39575466 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #9
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 734 - 789
Target Start/End: Complemental strand, 39564522 - 39564467
Alignment:
| Q |
734 |
cttttgaagggtgttagtggtgcatttaggcctggtgttctcactgccctaatggg |
789 |
Q |
| |
|
|||||||||||||| ||||| || || || ||||||||||||||||| |||||||| |
|
|
| T |
39564522 |
cttttgaagggtgtaagtggagctttcagacctggtgttctcactgctctaatggg |
39564467 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #10
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 734 - 825
Target Start/End: Complemental strand, 39575333 - 39575242
Alignment:
| Q |
734 |
cttttgaagggtgttagtggtgcatttaggcctggtgttctcactgccctaatgggagttagtggagctggtaaaactactttaatggatgt |
825 |
Q |
| |
|
|||||||| ||||| || || || |||||||| |||||||||||||| || ||||| || | ||| ||||| ||||| ||||| |||||||| |
|
|
| T |
39575333 |
cttttgaacggtgtcagcggagcttttaggccaggtgttctcactgcacttatgggtgtcactggtgctggcaaaacaactttgatggatgt |
39575242 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 40; Significance: 0.0000000000003; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 733 - 828
Target Start/End: Complemental strand, 2149131 - 2149036
Alignment:
| Q |
733 |
acttttgaagggtgttagtggtgcatttaggcctggtgttctcactgccctaatgggagttagtggagctggtaaaactactttaatggatgtttt |
828 |
Q |
| |
|
|||||||||||||||||||||||| ||||| ||||| || || || || | ||||| || ||||| ||||| || |||||||||||||||||||| |
|
|
| T |
2149131 |
acttttgaagggtgttagtggtgcttttagacctggagtactaacagctttgatgggtgtaagtggtgctggaaagactactttaatggatgtttt |
2149036 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 39; Significance: 0.000000000001; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 758 - 828
Target Start/End: Original strand, 4501168 - 4501238
Alignment:
| Q |
758 |
tttaggcctggtgttctcactgccctaatgggagttagtggagctggtaaaactactttaatggatgtttt |
828 |
Q |
| |
|
||||||||||| ||||| ||||| ||||||||||||||||| || || || || ||||||||||||||||| |
|
|
| T |
4501168 |
tttaggcctggagttcttactgcactaatgggagttagtggtgccgggaagacaactttaatggatgtttt |
4501238 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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