View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF5916_high_14 (Length: 492)
Name: NF5916_high_14
Description: NF5916
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5916_high_14 |
 | |
|
Alignment Details
Target: chr4 (Bit Score: 322; Significance: 0; HSPs: 17)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 322; E-Value: 0
Query Start/End: Original strand, 1 - 474
Target Start/End: Complemental strand, 27524389 - 27523907
Alignment:
| Q |
1 |
tgtaagaaggaagtaactaaatttttgatgatgcaatgatttgtgctgttagtgaaggagatagtaagtgtatttatagattttgaagttctctcaaaac |
100 |
Q |
| |
|
|||| |||||| |||||||||| |||||| ||||||||| || | ||||| |||||||||| || |||| ||| |||||||||| ||||||||||||| | |
|
|
| T |
27524389 |
tgtatgaaggatgtaactaaatatttgataatgcaatgagtttttctgtttgtgaaggagagaggaagtttatatatagattttaaagttctctcaaacc |
27524290 |
T |
|
| Q |
101 |
caaattccaagaaaaactattattgatggggttgaaggatatagatcatagggataaggtagcatgtggtgttgtcttcgagtgtaccctaccttcttaa |
200 |
Q |
| |
|
|||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |
|
|
| T |
27524289 |
caaatttcaagaaaaactattattgaaggggttgaaggatatagatcatagggataaggtagcatgtggtgttgtcttagagtgtaccctaccttcttaa |
27524190 |
T |
|
| Q |
201 |
acaatgtccaatacaaagcttccacttgctaccaaatgagatgtgc--------aacctcatatttgttgatgatttaattggtgtacttcataattttg |
292 |
Q |
| |
|
||||| |||||||||||||||||| ||||||||||||||||||||| ||| |||||||| || |||||||||||||| | ||||||||||| | |
|
|
| T |
27524189 |
acaatatccaatacaaagcttccaattgctaccaaatgagatgtgctcaagtgcaacgtcatatttcttcatgatttaattggtttccttcataatttcg |
27524090 |
T |
|
| Q |
293 |
taaacatgcttcagacatgttttcttcattatgataatgctgatgtccagctggtaagtgactacatggctatggataacaattgatcaacagaaaccat |
392 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||| |
|
|
| T |
27524089 |
taaacatgcttcagacatgttttcttcattatgataatgctgatgtccagctggtaagtgtctacatggctatggataacaattgatcaacataaaccat |
27523990 |
T |
|
| Q |
393 |
tctacatgtctgtgg-ttgtaatttcaagtttatcaattatatgacgcttctgcacaagaattatgcattatctatctactac |
474 |
Q |
| |
|
||||||||||||||| ||||| |||||||| |||||||||||||| |||| |||||||||||||||||||||||||||||||| |
|
|
| T |
27523989 |
tctacatgtctgtggtttgtactttcaagtctatcaattatatgatgcttttgcacaagaattatgcattatctatctactac |
27523907 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 269; E-Value: 1e-150
Query Start/End: Original strand, 15 - 474
Target Start/End: Original strand, 27468624 - 27469093
Alignment:
| Q |
15 |
aactaaatttttgatgatgc-aatgatttgtgctgttagtgaaggagatagtaagtgtatttatagattttgaagttctctcaaaaccaaattccaagaa |
113 |
Q |
| |
|
|||||||| ||||||||||| ||||| |||| ||||| ||||||| || || |||||||||||||||||||||||||||||||||| |||||| ||| || |
|
|
| T |
27468624 |
aactaaatatttgatgatgccaatgagttgtcctgtttgtgaaggcgagaggaagtgtatttatagattttgaagttctctcaaaatcaaatttcaacaa |
27468723 |
T |
|
| Q |
114 |
aaactattattgatggggttgaaggatatagatcatagggataaggtagcatgtggtgttgtcttcgagtgtaccctaccttcttaaacaa-tgtccaat |
212 |
Q |
| |
|
||||||||||||| ||| |||| ||||| ||| |||||||||||||| ||||||||||||||| ||||||||||||||||||||||||| |||||||| |
|
|
| T |
27468724 |
aaactattattgaagggtttgatggatagagagcatagggataaggtctcatgtggtgttgtctaagagtgtaccctaccttcttaaacaaatgtccaat |
27468823 |
T |
|
| Q |
213 |
acaaagcttccacttgctaccaaatgagatgtgc--------aacctcatatttgttgatgatttaattggtgtacttcataattttgtaaacatgcttc |
304 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| | |||||||||| || |||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
27468824 |
acaaagcttccacttgctaccaaatgagatgtgctcaagtgcagcctcatatttcttcatgatttaattggtgtacttcataattttgtaaacatgcttc |
27468923 |
T |
|
| Q |
305 |
agacatgttttcttcattatgataatgctgatgtccagctggtaagtgactacatggctatggataacaattgatcaacagaaaccattctacatgtctg |
404 |
Q |
| |
|
|||||||||||||||||||||||||||| ||||| |||||||||||||||| | ||| |||||||||||| ||||||| ||||||||||||||||||| |
|
|
| T |
27468924 |
agacatgttttcttcattatgataatgccgatgtgaagctggtaagtgactataaggccatggataacaatagatcaactcaaaccattctacatgtctg |
27469023 |
T |
|
| Q |
405 |
tggttgtaatttcaagtttatcaattatatgacgcttctgcacaagaattatgcattatctatctactac |
474 |
Q |
| |
|
||||| || |||||||| |||| || |||||| |||||| | |||||||||||||||||||||||||||| |
|
|
| T |
27469024 |
tggttctactttcaagtctatctatcatatgatgcttctactcaagaattatgcattatctatctactac |
27469093 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 259; E-Value: 1e-144
Query Start/End: Original strand, 14 - 474
Target Start/End: Complemental strand, 27514736 - 27514277
Alignment:
| Q |
14 |
taactaaatttttgatgatgc-aatgatttgtgctgttagtgaaggagatagtaagtgtatttatagattttgaagttctctcaaaaccaaattccaaga |
112 |
Q |
| |
|
||||||||| |||||||||| ||||| ||||||| ||| ||||||||| || ||||||||||||||||||||||||||||||| ||||||||| ||||| |
|
|
| T |
27514736 |
taactaaatacttgatgatgccaatgagttgtgct-tta-tgaaggagagaggaagtgtatttatagattttgaagttctctcagaaccaaatttcaaga |
27514639 |
T |
|
| Q |
113 |
aaaactattattgatggggttgaaggatatagatcatagggataaggtagcatgtggtgttgtcttcgagtgtaccctaccttcttaaacaa-tgtccaa |
211 |
Q |
| |
|
||||||||||||| ||| |||| ||||| ||| |||||||||||||| ||||||||||||||| ||||||||||||||||||||||||| ||||||| |
|
|
| T |
27514638 |
gaaactattattgaagggtttgatggatagagagcatagggataaggtctcatgtggtgttgtctaagagtgtaccctaccttcttaaacaaatgtccaa |
27514539 |
T |
|
| Q |
212 |
tacaaagcttccacttgctaccaaatgagatgtgcaacctcatatttgttgatgatttaattggtgtacttcataattttgtaaacatgcttcagacatg |
311 |
Q |
| |
|
||||||||||||||||||||||||||||||||| || |||||||||| || ||||||||||||||||||||||||||||||||||||||||| ||||||| |
|
|
| T |
27514538 |
tacaaagcttccacttgctaccaaatgagatgt-cagcctcatatttcttcatgatttaattggtgtacttcataattttgtaaacatgctttagacatg |
27514440 |
T |
|
| Q |
312 |
ttttcttcattatgataatgctgatgtccagctggtaagtgactacatggctatggataacaattgatcaacagaaaccattctacatgtctgtggttgt |
411 |
Q |
| |
|
|||||| |||||||||||||||||||||||||| ||||||||||| | || || ||||||||| | ||||| ||||||||||| |||| ||||| | | |
|
|
| T |
27514439 |
ttttctgcattatgataatgctgatgtccagctagtaagtgactataatgccatagataacaatataacaacataaaccattctatatgtttgtggcttt |
27514340 |
T |
|
| Q |
412 |
aatttcaagtttatcaattatatgacgcttctgcacaagaattatgcattatctatctactac |
474 |
Q |
| |
|
| |||||||| |||||||||||||| |||| ||| |||||||||||||||||||||||||||| |
|
|
| T |
27514339 |
actttcaagtctatcaattatatgatgcttatgctcaagaattatgcattatctatctactac |
27514277 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 240; E-Value: 1e-133
Query Start/End: Original strand, 13 - 474
Target Start/End: Original strand, 27475855 - 27476323
Alignment:
| Q |
13 |
gtaactaaatttttgatgatgc-aatgatttgtgctgttagtgaaggagatagtaagtgtatttatagattttgaagttctctcaaaaccaaattccaag |
111 |
Q |
| |
|
|||||||||| ||||||||||| ||| | |||||||||| ||||||||| || ||||||||||||||||||||||||||||||||||||||||| |||| |
|
|
| T |
27475855 |
gtaactaaatatttgatgatgccaatcagttgtgctgtttatgaaggagagaggaagtgtatttatagattttgaagttctctcaaaaccaaatttcaag |
27475954 |
T |
|
| Q |
112 |
aaaaactattattgatggggttgaaggatatagatcatagggataaggtagcatgtggtgttgtcttcgagtgtaccctacc-ttcttaaacaatgtcca |
210 |
Q |
| |
|
| ||||||||||||| ||| |||| ||||| ||| || ||||||||||||||||| ||||||||||| |||||||||||||| ||| ||||||||||||| |
|
|
| T |
27475955 |
agaaactattattgaagggtttgatggatagagagcacagggataaggtagcatggggtgttgtcttagagtgtaccctacctttcctaaacaatgtcca |
27476054 |
T |
|
| Q |
211 |
atacaaagcttccacttgctaccaaatgagatgtg--caa------cctcatatttgttgatgatttaattggtgtacttcataattttgtaaacatgct |
302 |
Q |
| |
|
||||||||||||||||||||| |||| ||||||| ||| ||||||||||||| ||||||||||| | | | |||||||||||| |||||| |
|
|
| T |
27476055 |
atacaaagcttccacttgctaaaaaataagatgtgatcaagtatagcctcatatttgttcatgatttaattagcg---tcaataattttgtaagcatgct |
27476151 |
T |
|
| Q |
303 |
tcagacatgttttcttcattatgataatgctgatgtccagctggtaagtgactacatggctatggataacaattgatcaacagaaaccattctacatgtc |
402 |
Q |
| |
|
|||||||||||||||||||||||||||||| ||||| |||||||| |||||| | || |||||||||||| |||||||| ||||||||||||||||| |
|
|
| T |
27476152 |
tcagacatgttttcttcattatgataatgccgatgtgaagctggtatgtgactctaaggacatggataacaatagatcaacataaaccattctacatgtc |
27476251 |
T |
|
| Q |
403 |
tgtggttgtaatttcaagtttatcaattatatgacgcttctgcacaagaattatgcattatctatctactac |
474 |
Q |
| |
|
|||||||||| |||||||| |||||||||||||| |||||||| |||||||||||||||||||||||||||| |
|
|
| T |
27476252 |
tgtggttgtactttcaagtctatcaattatatgatgcttctgctcaagaattatgcattatctatctactac |
27476323 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 201; E-Value: 1e-109
Query Start/End: Original strand, 1 - 384
Target Start/End: Complemental strand, 27503788 - 27503399
Alignment:
| Q |
1 |
tgtaagaaggaagtaactaaatttttgatgatgcaatgatttgtgctgttagtgaaggagatagtaagtgtatttatagattttgaagttctctcaaaac |
100 |
Q |
| |
|
||||||| ||| |||| ||| | |||||||||||||||| |||||||||| |||||||||| || ||||||||||||||| ||||||||| ||||||||| |
|
|
| T |
27503788 |
tgtaagatggatgtaattaagtatttgatgatgcaatgaattgtgctgtttgtgaaggagagaggaagtgtatttatagagtttgaagttatctcaaaac |
27503689 |
T |
|
| Q |
101 |
caaattccaagaaaaactattattgatggggttgaaggatatagatcatagggataaggtagcatgtggtgttgtcttcgagtgtaccctacc-ttctta |
199 |
Q |
| |
|
| |||||| ||||||||||||||||| ||||| |||||||| ||||||||||||||| |||||||||||||||||||| |||||| ||||||| ||| || |
|
|
| T |
27503688 |
ccaattcctagaaaaactattattgaaggggtggaaggatagagatcatagggataatgtagcatgtggtgttgtcttagagtgtcccctacctttccta |
27503589 |
T |
|
| Q |
200 |
aacaatgtccaatacaaagcttccacttgctaccaaatgagatgtg--caa------cctcatatttgttgatgatttaattggtgtacttcataatttt |
291 |
Q |
| |
|
|||||||||||||||||||||||||||||||| |||| ||||||| ||| ||||||||||||| ||||||||||| | | | |||||||| |
|
|
| T |
27503588 |
aacaatgtccaatacaaagcttccacttgctaaaaaataagatgtgatcaagtatagcctcatatttgttcatgatttaattagcg---tcaataatttt |
27503492 |
T |
|
| Q |
292 |
gtaaacatgcttcagacatgttttcttcattatgataatgctgatgtccagctggtaagtgactacatggctatggataacaattgatcaaca |
384 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||| | ||| |||||||||||| |||||||| |
|
|
| T |
27503491 |
gtaaacatgcttcagacatgttttcttcattatgataatgttgatgtccagctgataagtgactataaggcaatggataacaatagatcaaca |
27503399 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 156; E-Value: 1e-82
Query Start/End: Original strand, 2 - 244
Target Start/End: Complemental strand, 27508731 - 27508488
Alignment:
| Q |
2 |
gtaagaaggaagtaactaaatttttgatgatgc-aatgatttgtgctgttagtgaaggagatagtaagtgtatttatagattttgaagttctctcaaaac |
100 |
Q |
| |
|
|||||||||| |||||||| | |||||||||| ||||| |||||||||| |||||||||| || ||||||||||||||| ||||||||| ||||||||| |
|
|
| T |
27508731 |
gtaagaaggatgtaactaagtaattgatgatgctaatgagttgtgctgtttgtgaaggagagaggaagtgtatttatagagtttgaagttatctcaaaac |
27508632 |
T |
|
| Q |
101 |
caaattccaagaaaaactattattgatggggttgaaggatatagatcatagggataaggtagcatgtggtgttgtcttcgagtgtaccctaccttcttaa |
200 |
Q |
| |
|
| |||||| ||||||||||||||||| ||||| |||||||| ||| ||||| ||||||||||||||||||| |||||| ||||||||||||||||||||| |
|
|
| T |
27508631 |
ccaattcctagaaaaactattattgaaggggtggaaggatagagagcatagtgataaggtagcatgtggtgctgtcttagagtgtaccctaccttcttaa |
27508532 |
T |
|
| Q |
201 |
acaatgtccaatacaaagcttccacttgctaccaaatgagatgt |
244 |
Q |
| |
|
||||||||||||||||||||||||||| |||||||||||||||| |
|
|
| T |
27508531 |
acaatgtccaatacaaagcttccacttcctaccaaatgagatgt |
27508488 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #7
Raw Score: 116; E-Value: 8e-59
Query Start/End: Original strand, 244 - 474
Target Start/End: Complemental strand, 27489723 - 27489495
Alignment:
| Q |
244 |
tgcaacctcatatttgttgatgatttaattggtgtacttcataattttgtaaacatgcttcagacatgttttcttcattatgataatgctgatgtccagc |
343 |
Q |
| |
|
||||||||||||||| || ||| ||||||||| |||| ||||||||||||||||||| |||||||||||||||||||||| |||| |||||||||| |
|
|
| T |
27489723 |
tgcaacctcatatttattcatgcattaattggt--actttgtaattttgtaaacatgctttagacatgttttcttcattatgaaaatgtcgatgtccagc |
27489626 |
T |
|
| Q |
344 |
tggtaagtgactacatggctatggataacaattgatcaacagaaaccattctacatgtctgtggttgtaatttcaagtttatcaattatatgacgcttct |
443 |
Q |
| |
|
|||| ||||| || | ||| ||| |||| || ||||| || | |||||||||||||||||||||||| |||||||| |||||||||||||| |||||| |
|
|
| T |
27489625 |
tggttagtgattataaggcaatgtataattatggatcatcataggccattctacatgtctgtggttgtactttcaagtctatcaattatatgatgcttct |
27489526 |
T |
|
| Q |
444 |
gcacaagaattatgcattatctatctactac |
474 |
Q |
| |
|
||||||||||||||||||||||||||||||| |
|
|
| T |
27489525 |
gcacaagaattatgcattatctatctactac |
27489495 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #8
Raw Score: 116; E-Value: 8e-59
Query Start/End: Original strand, 280 - 471
Target Start/End: Complemental strand, 27508486 - 27508295
Alignment:
| Q |
280 |
cttcataattttgtaaacatgcttcagacatgttttcttcattatgataatgctgatgtccagctggtaagtgactacatggctatggataacaattgat |
379 |
Q |
| |
|
|||||||||||| |||||||||| |||||||||||||||||||||| ||||||||||||||||| ||||||||||| | ||| || ||||||||| ||| |
|
|
| T |
27508486 |
cttcataattttataaacatgctgaagacatgttttcttcattatgacaatgctgatgtccagctagtaagtgactataaggccatagataacaatagat |
27508387 |
T |
|
| Q |
380 |
caacagaaaccattctacatgtctgtggttgtaatttcaagtttatcaattatatgacgcttctgcacaagaattatgcattatctatctac |
471 |
Q |
| |
|
|||||||||||||||||||||| ||||||| || || ||||| |||||||||||||| |||||| | |||||||||||||||||||| |||| |
|
|
| T |
27508386 |
caacagaaaccattctacatgtttgtggttctacttacaagtctatcaattatatgatgcttcttctcaagaattatgcattatctagctac |
27508295 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #9
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 282 - 401
Target Start/End: Original strand, 27556962 - 27557081
Alignment:
| Q |
282 |
tcataattttgtaaacatgcttcagacatgttttcttcattatgataatgctgatgtccagctggtaagtgactacatggctatggataacaattgatca |
381 |
Q |
| |
|
|||||||||||||||||||||| |||||||||||||||||||||||| || |||| |||||||||||||||| || | || |||||||||||| ||||| |
|
|
| T |
27556962 |
tcataattttgtaaacatgctttagacatgttttcttcattatgatagtgttgatttccagctggtaagtgattataacgcaatggataacaatagatca |
27557061 |
T |
|
| Q |
382 |
acagaaaccattctacatgt |
401 |
Q |
| |
|
||| |||||||||||||||| |
|
|
| T |
27557062 |
acataaaccattctacatgt |
27557081 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #10
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 289 - 401
Target Start/End: Original strand, 27497858 - 27497971
Alignment:
| Q |
289 |
tttgtaaacatgcttcagacatgttttcttcattatgataatgctgatgtccagctggtaagtga-ctacatggctatggataacaattgatcaacagaa |
387 |
Q |
| |
|
|||||||||| |||| |||||||||||||||||||||||||| ||||||| ||||||||||||| || | ||| ||||||||||| |||||||| || |
|
|
| T |
27497858 |
tttgtaaacaggcttaggacatgttttcttcattatgataatgttgatgtctagctggtaagtgagatataaggcagtggataacaatagatcaacataa |
27497957 |
T |
|
| Q |
388 |
accattctacatgt |
401 |
Q |
| |
|
|||||||||||||| |
|
|
| T |
27497958 |
accattctacatgt |
27497971 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #11
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 279 - 344
Target Start/End: Complemental strand, 27506325 - 27506260
Alignment:
| Q |
279 |
acttcataattttgtaaacatgcttcagacatgttttcttcattatgataatgctgatgtccagct |
344 |
Q |
| |
|
|||||||||||||||||||||| ||||||||||||||||||||||| | | ||||||||||||||| |
|
|
| T |
27506325 |
acttcataattttgtaaacatgtttcagacatgttttcttcattatcaaagtgctgatgtccagct |
27506260 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #12
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 279 - 344
Target Start/End: Original strand, 27479399 - 27479464
Alignment:
| Q |
279 |
acttcataattttgtaaacatgcttcagacatgttttcttcattatgataatgctgatgtccagct |
344 |
Q |
| |
|
||||||||||| |||||||||| ||||||||||||||||||||||| || ||||||||||||||| |
|
|
| T |
27479399 |
acttcataattgtgtaaacatgtttcagacatgttttcttcattatcatggtgctgatgtccagct |
27479464 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #13
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 279 - 341
Target Start/End: Original strand, 27486459 - 27486521
Alignment:
| Q |
279 |
acttcataattttgtaaacatgcttcagacatgttttcttcattatgataatgctgatgtcca |
341 |
Q |
| |
|
||||||||||| |||||||||| ||||||||||||||||||||||| | | || ||||||||| |
|
|
| T |
27486459 |
acttcataattgtgtaaacatgtttcagacatgttttcttcattattaaagtgttgatgtcca |
27486521 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #14
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 277 - 334
Target Start/End: Complemental strand, 27526747 - 27526689
Alignment:
| Q |
277 |
gtacttcataattttgtaaacatgcttcagacatg-ttttcttcattatgataatgctg |
334 |
Q |
| |
|
|||||||||||||||| |||||| |||||||||| ||||||||||||||||||||||| |
|
|
| T |
27526747 |
gtacttcataattttgaaaacattgttcagacatgtttttcttcattatgataatgctg |
27526689 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #15
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 277 - 351
Target Start/End: Original strand, 27554101 - 27554174
Alignment:
| Q |
277 |
gtacttcataattttgtaaacatgcttcagacatgttttcttcattatgataatgctgatgtccagctggtaagt |
351 |
Q |
| |
|
|||||||||||||||| ||||||| | |||||||||| ||||||| |||||||| |||| |||||||||||||| |
|
|
| T |
27554101 |
gtacttcataattttgcaaacatgtctaagacatgttt-cttcattttgataatgttgatctccagctggtaagt |
27554174 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #16
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 281 - 348
Target Start/End: Complemental strand, 27431937 - 27431871
Alignment:
| Q |
281 |
ttcataattttgtaaacatgcttcagacatgttttcttcattatgataatgctgatgtccagctggta |
348 |
Q |
| |
|
||||||||||||||||||||| | | |||||||| |||||| |||||||| |||||||||||||||| |
|
|
| T |
27431937 |
ttcataattttgtaaacatgcattatacatgttt-cttcatcttgataatgttgatgtccagctggta |
27431871 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 160 - 241
Target Start/End: Complemental strand, 27517451 - 27517369
Alignment:
| Q |
160 |
tagcatgtggtgttgtcttc-gagtgtaccctaccttcttaaacaatgtccaatacaaagcttccacttgctaccaaatgaga |
241 |
Q |
| |
|
|||||||||| |||||||| || ||||||| ||||||| |||||||| |||| |||||||||||||||| ||||| ||||| |
|
|
| T |
27517451 |
tagcatgtggcgttgtcttaagattgtaccccaccttctcaaacaatggccaacacaaagcttccacttggaaccaattgaga |
27517369 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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