View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5916_high_37 (Length: 266)
Name: NF5916_high_37
Description: NF5916
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5916_high_37 |
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Alignment Details
Target: chr7 (Bit Score: 221; Significance: 1e-122; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 221; E-Value: 1e-122
Query Start/End: Original strand, 6 - 258
Target Start/End: Original strand, 24293826 - 24294077
Alignment:
| Q |
6 |
aagggtgaaccgtgaaagcaaaataagactcaggtaaatcagtaaaaatacaatgcgacgcgataaaaaatttaatattaaaaatcgcatttccggcagc |
105 |
Q |
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| T |
24293826 |
aagggtgaactgtgaaagcaaaataagactcaggtaaatcagtaaaaatataatgcgacgcgataaaaaatttaatat-aaaaatcgcatttccggctgc |
24293924 |
T |
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| Q |
106 |
cttggcaccaatttcttgcagccacggatacccgattatttttgacaacctcttgcagcaaacagtttcctttctaacatgccaacaacccagggtcacc |
205 |
Q |
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|||||||||||||||| |||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
24293925 |
cttggcaccaatttctggcagccacgggtacccgattatttttgacaacttcttgcagcaaacagtttcctttctaacatgccaacaacccagggtcacc |
24294024 |
T |
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| Q |
206 |
ctcgaaaaagtgacattatcggtgacttttaagcatttctgagggcctttgct |
258 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
24294025 |
ctcgaaaaagtgacattatcggtgacttttaagcatttctgagggcctttgct |
24294077 |
T |
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