View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF5916_low_34 (Length: 311)

Name: NF5916_low_34
Description: NF5916
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF5916_low_34
NF5916_low_34
[»] chr8 (10 HSPs)
chr8 (19-293)||(42220911-42221185)
chr8 (23-307)||(41841204-41841492)
chr8 (219-307)||(44878950-44879038)
chr8 (219-307)||(44880883-44880971)
chr8 (252-307)||(40054312-40054367)
chr8 (250-307)||(10944451-10944508)
chr8 (254-307)||(37679757-37679810)
chr8 (252-307)||(37682057-37682112)
chr8 (245-293)||(42872516-42872564)
chr8 (269-307)||(44582870-44582908)
[»] chr5 (4 HSPs)
chr5 (19-307)||(1716504-1716792)
chr5 (252-307)||(3643640-3643695)
chr5 (252-307)||(7524968-7525023)
chr5 (256-307)||(4103249-4103300)
[»] chr4 (9 HSPs)
chr4 (19-307)||(3461194-3461481)
chr4 (244-307)||(49106581-49106644)
chr4 (244-307)||(50077251-50077314)
chr4 (245-307)||(49108685-49108747)
chr4 (250-307)||(11652444-11652501)
chr4 (253-307)||(26984719-26984773)
chr4 (253-307)||(26998792-26998846)
chr4 (253-301)||(48205832-48205880)
chr4 (257-293)||(34481155-34481191)
[»] chr2 (20 HSPs)
chr2 (54-307)||(2841069-2841327)
chr2 (245-301)||(8984686-8984742)
chr2 (244-307)||(8979314-8979377)
chr2 (244-307)||(9026778-9026841)
chr2 (244-307)||(30732000-30732063)
chr2 (245-307)||(43850042-43850104)
chr2 (244-301)||(8973304-8973361)
chr2 (250-307)||(9008019-9008076)
chr2 (244-301)||(9023439-9023496)
chr2 (250-307)||(32918078-32918135)
chr2 (244-307)||(9032045-9032108)
chr2 (254-307)||(30733990-30734043)
chr2 (252-301)||(9020847-9020896)
chr2 (254-307)||(19232451-19232504)
chr2 (244-307)||(8988447-8988510)
chr2 (244-301)||(9030390-9030447)
chr2 (250-301)||(8992146-8992197)
chr2 (250-307)||(9016491-9016548)
chr2 (259-307)||(10763930-10763978)
chr2 (255-290)||(39814115-39814150)
[»] chr6 (4 HSPs)
chr6 (244-307)||(10791704-10791767)
chr6 (244-307)||(10795942-10796005)
chr6 (252-307)||(30521242-30521297)
chr6 (254-301)||(8875691-8875738)
[»] chr1 (20 HSPs)
chr1 (244-307)||(14654392-14654455)
chr1 (244-307)||(14664183-14664246)
chr1 (244-307)||(14669761-14669824)
chr1 (244-307)||(14706080-14706143)
chr1 (244-307)||(14708570-14708633)
chr1 (244-307)||(14716283-14716346)
chr1 (244-307)||(28366251-28366314)
chr1 (244-307)||(33988062-33988125)
chr1 (245-307)||(14676625-14676687)
chr1 (245-307)||(14683743-14683805)
chr1 (245-307)||(38175582-38175644)
chr1 (250-307)||(14674479-14674536)
chr1 (250-307)||(14679857-14679914)
chr1 (252-307)||(14652525-14652580)
chr1 (252-307)||(14662316-14662371)
chr1 (250-301)||(14667169-14667220)
chr1 (245-307)||(14681592-14681654)
chr1 (258-307)||(37422175-37422224)
chr1 (255-307)||(11872533-11872585)
chr1 (250-293)||(28698551-28698594)
[»] chr3 (1 HSPs)
chr3 (254-300)||(15758562-15758608)


Alignment Details
Target: chr8 (Bit Score: 243; Significance: 1e-135; HSPs: 10)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 243; E-Value: 1e-135
Query Start/End: Original strand, 19 - 293
Target Start/End: Complemental strand, 42221185 - 42220911
Alignment:
Q  19 atattcattggagagcttctcaaaatctgtaaaacgtattgttggcatgagatttgtccttgttggaagttcaaatcatatatcctttgtttggaaattg 118  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  42221185 atattcattggagagcttctcaaaatctgtaaaacgtattgttggcatgagatttgtccttgttggaagctcaaatcatatatcctttgtttggaaattg 42221086  T
Q  119 gtctttgttggccatgtcatgccatacaagaacaagctagtcccaagctattgcaaatagtcccacatcgctagttctagaaagtaagtggttgatatga 218  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  42221085 gtctttgttggccatgtcatgccatacaagaacaagctagtcccaagctattgcaaatagtcccacatcgctagttctagaaagtaagtggtggatatga 42220986  T
Q  219 gatataaaagcaggggcgagcatggctttccactcatacctttctcggccttttggctaagatcaagtgtagtat 293  Q
    ||||||||||||| ||||||||| |||||| |||||||| ||| |||| ||||||||||||||||||||||||||    
T  42220985 gatataaaagcagaggcgagcatagctttcaactcatacatttttcggtcttttggctaagatcaagtgtagtat 42220911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 104; E-Value: 7e-52
Query Start/End: Original strand, 23 - 307
Target Start/End: Complemental strand, 41841492 - 41841204
Alignment:
Q  23 tcattggagagcttctcaaaatctgtaaaacgtattgttggcatgagatttgtccttgttggaagttcaaatcatatatcctttgtttggaaattggtct 122  Q
    ||||||| ||||||||||||||||||||||  ||| |||| |||||||||||||||||||||||| ||||||||  ||||||||| |||||| |||||||    
T  41841492 tcattggtgagcttctcaaaatctgtaaaatatatcgttgacatgagatttgtccttgttggaagctcaaatcacgtatcctttgcttggaatttggtct 41841393  T
Q  123 ttgttggccatgtcatgccatacaagaacaagctagtcccaagctattg-caaa---tagtcccacatcgctagttctagaaagtaagtg-gttgatatg 217  Q
     ||||||||||| |||| | ||||||||| |   ||||||||| | ||| | ||   ||||||||||||||| |||  |||||| ||||| || ||| ||    
T  41841392 ctgttggccatgccatg-cgtacaagaaccattgagtcccaagttgttgtctaagtttagtcccacatcgctcgtttaagaaagcaagtgagtggatgtg 41841294  T
Q  218 agatataaaagcaggggcgagcatggctttccactcatacctttctcggccttttggctaagatcaagtgtagtatttgttcttctcagt 307  Q
    ||||||||||||||  || | |    ||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||    
T  41841293 agatataaaagcagaagccaacccatctttcaactcatacctttctcggccttttggctaagatcaagtgtagtatctgttcttatcagt 41841204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 219 - 307
Target Start/End: Original strand, 44878950 - 44879038
Alignment:
Q  219 gatataaaagcaggggcgagcatggctttccactcatacctttctcggccttttggctaagatcaagtgtagtatttgttcttctcagt 307  Q
    ||||||||||||| |||||||    | ||| |||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||    
T  44878950 gatataaaagcagaggcgagcccaacattcaactcatacctttctcggccttttggctaagatcaagtgtagtatctgttcttatcagt 44879038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 219 - 307
Target Start/End: Complemental strand, 44880971 - 44880883
Alignment:
Q  219 gatataaaagcaggggcgagcatggctttccactcatacctttctcggccttttggctaagatcaagtgtagtatttgttcttctcagt 307  Q
    ||||||||||||| |||||||    | ||| |||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||    
T  44880971 gatataaaagcagaggcgagcccaacattcaactcatacctttctcggccttttggctaagatcaagtgtagtatctgttcttatcagt 44880883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 252 - 307
Target Start/End: Original strand, 40054312 - 40054367
Alignment:
Q  252 tcatacctttctcggccttttggctaagatcaagtgtagtatttgttcttctcagt 307  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||| |||||    
T  40054312 tcatacctttctcggccttttggctaagatcaagtgtagtatctgttcttatcagt 40054367  T

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Target: chr8; HSP #6
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 250 - 307
Target Start/End: Complemental strand, 10944508 - 10944451
Alignment:
Q  250 actcatacctttctcggccttttggctaagatcaagtgtagtatttgttcttctcagt 307  Q
    |||||||||||||||| ||||||||||||||||||||||||||| ||||||| |||||    
T  10944508 actcatacctttctcgaccttttggctaagatcaagtgtagtatctgttcttatcagt 10944451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 254 - 307
Target Start/End: Original strand, 37679757 - 37679810
Alignment:
Q  254 atacctttctcggccttttggctaagatcaagtgtagtatttgttcttctcagt 307  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||| |||||    
T  37679757 atacctttctcggccttttggctaagatcaagtgtagtatctgttcttatcagt 37679810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 252 - 307
Target Start/End: Original strand, 37682057 - 37682112
Alignment:
Q  252 tcatacctttctcggccttttggctaagatcaagtgtagtatttgttcttctcagt 307  Q
    |||||| ||||||||||||||||||||||||||||||||||| ||||||| |||||    
T  37682057 tcatacatttctcggccttttggctaagatcaagtgtagtatctgttcttatcagt 37682112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 245 - 293
Target Start/End: Complemental strand, 42872564 - 42872516
Alignment:
Q  245 tttccactcatacctttctcggccttttggctaagatcaagtgtagtat 293  Q
    |||| |||||||||||||||||||||||||||||||| |||||||||||    
T  42872564 tttcaactcatacctttctcggccttttggctaagattaagtgtagtat 42872516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 269 - 307
Target Start/End: Original strand, 44582870 - 44582908
Alignment:
Q  269 ttttggctaagatcaagtgtagtatttgttcttctcagt 307  Q
    ||||||||||||||||||||||||| ||||||| |||||    
T  44582870 ttttggctaagatcaagtgtagtatctgttcttatcagt 44582908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 182; Significance: 2e-98; HSPs: 4)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 182; E-Value: 2e-98
Query Start/End: Original strand, 19 - 307
Target Start/End: Complemental strand, 1716792 - 1716504
Alignment:
Q  19 atattcattggagagcttctcaaaatctgtaaaacgtattgttggcatgagatttgtccttgttggaagttcaaatcatatatcctttgtttggaaattg 118  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||  ||||||||||||||||||||    
T  1716792 atattcattggagagcttctcaaaatctgtaaaatgtattgttggcatgagatttgtccttgttggaagctcaaatcacgtatcctttgtttggaaattg 1716693  T
Q  119 gtctttgttggccatgtcatgccatacaagaacaagctagtcccaagctattgcaaatagtcccacatcgctagttctagaaagtaagtg-gttgatatg 217  Q
    |||||||||||||||| |||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||| |||||| ||||| || ||| ||    
T  1716692 gtctttgttggccatgccatgccatacaagagcaagctagtcccaggctattgcaaatagtcccacatcgctagttc-agaaagcaagtgagtggatgtg 1716594  T
Q  218 agatataaaagcaggggcgagcatggctttccactcatacctttctcggccttttggctaagatcaagtgtagtatttgttcttctcagt 307  Q
    ||||||||||  ||  |||||     ||||  |||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||    
T  1716593 agatataaaataagaagcgagtgcatcttttaactcatacctttctcggccttttggctaagatcaagtgtagtatctgttcttatcagt 1716504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 252 - 307
Target Start/End: Original strand, 3643640 - 3643695
Alignment:
Q  252 tcatacctttctcggccttttggctaagatcaagtgtagtatttgttcttctcagt 307  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||| |||||    
T  3643640 tcatacctttctcggccttttggctaagatcaagtgtagtatctgttcttatcagt 3643695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 252 - 307
Target Start/End: Original strand, 7524968 - 7525023
Alignment:
Q  252 tcatacctttctcggccttttggctaagatcaagtgtagtatttgttcttctcagt 307  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||| |||||    
T  7524968 tcatacctttctcggccttttggctaagatcaagtgtagtatctgttcttatcagt 7525023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 256 - 307
Target Start/End: Original strand, 4103249 - 4103300
Alignment:
Q  256 acctttctcggccttttggctaagatcaagtgtagtatttgttcttctcagt 307  Q
    ||||||||| || |||||| |||||||||||||||||| ||||||| |||||    
T  4103249 acctttctcagcattttggttaagatcaagtgtagtatctgttcttatcagt 4103300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 91; Significance: 4e-44; HSPs: 9)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 19 - 307
Target Start/End: Complemental strand, 3461481 - 3461194
Alignment:
Q  19 atattcattggagagcttctcaaaatctgtaaaacgtattgttggcatgagatttgtccttgttggaagttcaaatcatatatcctttgtttggaaattg 118  Q
    |||||||||||||||||||||||||||||||||| ||||||   |||  |||||||||||||||||||| ||||||||| ||||||||| ||| || |||    
T  3461481 atattcattggagagcttctcaaaatctgtaaaatgtattg---gcaaaagatttgtccttgttggaagctcaaatcatgtatcctttgcttgaaagttg 3461385  T
Q  119 gtctttgttggccatgtcatgccatacaagaacaagctagtcccaagctattg-caaa---tagtcccacatcgctagttctagaaagtaagtg-gttga 213  Q
    |||| ||||||| ||| |||| | | ||||||| ||  ||||||||| | ||| | ||   ||||||||||||||| ||   |||||| ||||| || ||    
T  3461384 gtctctgttggctatgccatg-cgtgcaagaactag--agtcccaagttgttgtctaagtttagtcccacatcgcttgtggaagaaagcaagtgagtgga 3461288  T
Q  214 tatgagatataaaagcaggggcgagcatggctttccactcatacctttctcggccttttggctaagatcaagtgtagtatttgttcttctcagt 307  Q
    |  ||||||||||| ||   ||||||||  ||||| | |||||||||||||||||||||||||||||||||||||||||| ||||||| |||||    
T  3461287 tgggagatataaaaccataagcgagcatctctttcaattcatacctttctcggccttttggctaagatcaagtgtagtatctgttcttatcagt 3461194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 244 - 307
Target Start/End: Complemental strand, 49106644 - 49106581
Alignment:
Q  244 ctttccactcatacctttctcggccttttggctaagatcaagtgtagtatttgttcttctcagt 307  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||    
T  49106644 ctttcaactcatacctttctcggccttttggctaagatcaagtgtagtatctgttcttatcagt 49106581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 244 - 307
Target Start/End: Complemental strand, 50077314 - 50077251
Alignment:
Q  244 ctttccactcatacctttctcggccttttggctaagatcaagtgtagtatttgttcttctcagt 307  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||    
T  50077314 ctttcaactcatacctttctcggccttttggctaagatcaagtgtagtatctgttcttatcagt 50077251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 245 - 307
Target Start/End: Complemental strand, 49108747 - 49108685
Alignment:
Q  245 tttccactcatacctttctcggccttttggctaagatcaagtgtagtatttgttcttctcagt 307  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||    
T  49108747 tttcaactcatacctttctcggccttttggctaagatcaagtgtagtatctgttcttatcagt 49108685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 250 - 307
Target Start/End: Complemental strand, 11652501 - 11652444
Alignment:
Q  250 actcatacctttctcggccttttggctaagatcaagtgtagtatttgttcttctcagt 307  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||    
T  11652501 actcatacctttctcggccttttggctaagatcaagtgtagtatctgttcttatcagt 11652444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 253 - 307
Target Start/End: Complemental strand, 26984773 - 26984719
Alignment:
Q  253 catacctttctcggccttttggctaagatcaagtgtagtatttgttcttctcagt 307  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||| |||||    
T  26984773 catacctttctcggccttttggctaagatcaagtgtagtatctgttcttatcagt 26984719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 253 - 307
Target Start/End: Complemental strand, 26998846 - 26998792
Alignment:
Q  253 catacctttctcggccttttggctaagatcaagtgtagtatttgttcttctcagt 307  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||| |||||    
T  26998846 catacctttctcggccttttggctaagatcaagtgtagtatctgttcttatcagt 26998792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 253 - 301
Target Start/End: Original strand, 48205832 - 48205880
Alignment:
Q  253 catacctttctcggccttttggctaagatcaagtgtagtatttgttctt 301  Q
    |||||||||||||||||||| |||||||| ||||||||||| |||||||    
T  48205832 catacctttctcggccttttagctaagattaagtgtagtatctgttctt 48205880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 257 - 293
Target Start/End: Complemental strand, 34481191 - 34481155
Alignment:
Q  257 cctttctcggccttttggctaagatcaagtgtagtat 293  Q
    |||||||| ||||||||||||||||| ||||||||||    
T  34481191 cctttctcagccttttggctaagatcgagtgtagtat 34481155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 87; Significance: 1e-41; HSPs: 20)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 54 - 307
Target Start/End: Complemental strand, 2841327 - 2841069
Alignment:
Q  54 gtattgttggcatgagatttgtccttgttggaagttcaaatcatatatcctttgtttggaaattggtctttgttggccatgtcatgccatacaagaacaa 153  Q
    |||||||||| || |||||||||||||||||||| ||||||||   |||||||| |||||||||||||||||||||||||| |||| | ||||||||||     
T  2841327 gtattgttggaatcagatttgtccttgttggaagctcaaatcacgcatcctttgcttggaaattggtctttgttggccatgccatg-cgtacaagaacag 2841229  T
Q  154 gctagtcccaagctattgcaaa----tagtcccacatcgctagttctagaaagtaagtg-gttgatatgagatataaaagcaggggcgagcatggcttt- 247  Q
    || ||||||||| |||||   |    ||||||||||||| | |||  |||||| ||||| || ||| ||||||||||||||||  ||||||     |||     
T  2841228 gcgagtcccaagttattgtttaagtttagtcccacatcggttgttgaagaaagcaagtgagtggatgtgagatataaaagcagacgcgagccccttttta 2841129  T
Q  248 ccactcatacctttctcggccttttggctaagatcaagtgtagtatttgttcttctcagt 307  Q
     | ||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||    
T  2841128 actctcatacctttctcggccttttggctaagatcaagtgtagtatctgttcttatcagt 2841069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 245 - 301
Target Start/End: Original strand, 8984686 - 8984742
Alignment:
Q  245 tttccactcatacctttctcggccttttggctaagatcaagtgtagtatttgttctt 301  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8984686 tttcaactcatacctttctcggccttttggctaagatcaagtgtagtatttgttctt 8984742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 244 - 307
Target Start/End: Original strand, 8979314 - 8979377
Alignment:
Q  244 ctttccactcatacctttctcggccttttggctaagatcaagtgtagtatttgttcttctcagt 307  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||    
T  8979314 ctttcaactcatacctttctcggccttttggctaagatcaagtgtagtatctgttcttatcagt 8979377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 244 - 307
Target Start/End: Original strand, 9026778 - 9026841
Alignment:
Q  244 ctttccactcatacctttctcggccttttggctaagatcaagtgtagtatttgttcttctcagt 307  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||    
T  9026778 ctttcaactcatacctttctcggccttttggctaagatcaagtgtagtatctgttcttatcagt 9026841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 244 - 307
Target Start/End: Original strand, 30732000 - 30732063
Alignment:
Q  244 ctttccactcatacctttctcggccttttggctaagatcaagtgtagtatttgttcttctcagt 307  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||    
T  30732000 ctttcaactcatacctttctcggccttttggctaagatcaagtgtagtatctgttcttatcagt 30732063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 245 - 307
Target Start/End: Original strand, 43850042 - 43850104
Alignment:
Q  245 tttccactcatacctttctcggccttttggctaagatcaagtgtagtatttgttcttctcagt 307  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||    
T  43850042 tttcaactcatacctttctcggccttttggctaagatcaagtgtagtatctgttcttatcagt 43850104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 244 - 301
Target Start/End: Original strand, 8973304 - 8973361
Alignment:
Q  244 ctttccactcatacctttctcggccttttggctaagatcaagtgtagtatttgttctt 301  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  8973304 ctttcaactcatacctttctcggccttttggctaagatcaagtgtagtatctgttctt 8973361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 250 - 307
Target Start/End: Original strand, 9008019 - 9008076
Alignment:
Q  250 actcatacctttctcggccttttggctaagatcaagtgtagtatttgttcttctcagt 307  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||    
T  9008019 actcatacctttctcggccttttggctaagatcaagtgtagtatctgttcttatcagt 9008076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 244 - 301
Target Start/End: Original strand, 9023439 - 9023496
Alignment:
Q  244 ctttccactcatacctttctcggccttttggctaagatcaagtgtagtatttgttctt 301  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  9023439 ctttcaactcatacctttctcggccttttggctaagatcaagtgtagtatctgttctt 9023496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 250 - 307
Target Start/End: Original strand, 32918078 - 32918135
Alignment:
Q  250 actcatacctttctcggccttttggctaagatcaagtgtagtatttgttcttctcagt 307  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||    
T  32918078 actcatacctttctcggccttttggctaagatcaagtgtagtatctgttcttatcagt 32918135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 244 - 307
Target Start/End: Original strand, 9032045 - 9032108
Alignment:
Q  244 ctttccactcatacctttctcggccttttggctaagatcaagtgtagtatttgttcttctcagt 307  Q
    ||||| ||||||||||||||||||||||||| |||||||||||||||||| ||||||| |||||    
T  9032045 ctttcaactcatacctttctcggccttttggttaagatcaagtgtagtatctgttcttatcagt 9032108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 254 - 307
Target Start/End: Original strand, 30733990 - 30734043
Alignment:
Q  254 atacctttctcggccttttggctaagatcaagtgtagtatttgttcttctcagt 307  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||| |||||    
T  30733990 atacctttctcggccttttggctaagatcaagtgtagtatctgttcttatcagt 30734043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 252 - 301
Target Start/End: Original strand, 9020847 - 9020896
Alignment:
Q  252 tcatacctttctcggccttttggctaagatcaagtgtagtatttgttctt 301  Q
    |||||| ||||||||||||||||||||||||||||||||||| |||||||    
T  9020847 tcatacatttctcggccttttggctaagatcaagtgtagtatctgttctt 9020896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 254 - 307
Target Start/End: Complemental strand, 19232504 - 19232451
Alignment:
Q  254 atacctttctcggccttttggctaagatcaagtgtagtatttgttcttctcagt 307  Q
    |||||||||||||||||||||||||||||||||||| ||| ||||||| |||||    
T  19232504 atacctttctcggccttttggctaagatcaagtgtaatatctgttcttatcagt 19232451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 244 - 307
Target Start/End: Original strand, 8988447 - 8988510
Alignment:
Q  244 ctttccactcatacctttctcggccttttggctaagatcaagtgtagtatttgttcttctcagt 307  Q
    ||||| ||| ||||| |||| ||||||||||| ||||||||||||||||||||||||| |||||    
T  8988447 ctttcaacttataccattcttggccttttggcgaagatcaagtgtagtatttgttcttatcagt 8988510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 244 - 301
Target Start/End: Original strand, 9030390 - 9030447
Alignment:
Q  244 ctttccactcatacctttctcggccttttggctaagatcaagtgtagtatttgttctt 301  Q
    ||||| |||||||  ||||| ||||||||||||||||||||||||||||| |||||||    
T  9030390 ctttcaactcatatttttcttggccttttggctaagatcaagtgtagtatctgttctt 9030447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 250 - 301
Target Start/End: Original strand, 8992146 - 8992197
Alignment:
Q  250 actcatacctttctcggccttttggctaagatcaagtgtagtatttgttctt 301  Q
    |||||| |||||||| | |||||||||||||||||||||||||| |||||||    
T  8992146 actcatgcctttctcagtcttttggctaagatcaagtgtagtatatgttctt 8992197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 250 - 307
Target Start/End: Original strand, 9016491 - 9016548
Alignment:
Q  250 actcatacctttctcggccttttggctaagatcaagtgtagtatttgttcttctcagt 307  Q
    |||||||||||  ||| |||||||||||||||||| |||||||| ||||||| |||||    
T  9016491 actcataccttattcgaccttttggctaagatcaaatgtagtatctgttcttatcagt 9016548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 259 - 307
Target Start/End: Complemental strand, 10763978 - 10763930
Alignment:
Q  259 tttctcggccttttggctaagatcaagtgtagtatttgttcttctcagt 307  Q
    |||||||| |||||| ||||||||||||||||||| ||||||| |||||    
T  10763978 tttctcggtcttttgactaagatcaagtgtagtatatgttcttatcagt 10763930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 255 - 290
Target Start/End: Original strand, 39814115 - 39814150
Alignment:
Q  255 tacctttctcggccttttggctaagatcaagtgtag 290  Q
    ||||||||||||||||||||||| ||||||||||||    
T  39814115 tacctttctcggccttttggctatgatcaagtgtag 39814150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 52; Significance: 8e-21; HSPs: 4)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 244 - 307
Target Start/End: Complemental strand, 10791767 - 10791704
Alignment:
Q  244 ctttccactcatacctttctcggccttttggctaagatcaagtgtagtatttgttcttctcagt 307  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||    
T  10791767 ctttcaactcatacctttctcggccttttggctaagatcaagtgtagtatctgttcttatcagt 10791704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 244 - 307
Target Start/End: Complemental strand, 10796005 - 10795942
Alignment:
Q  244 ctttccactcatacctttctcggccttttggctaagatcaagtgtagtatttgttcttctcagt 307  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||    
T  10796005 ctttcaactcatacctttctcggccttttggctaagatcaagtgtagtatctgttcttatcagt 10795942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 252 - 307
Target Start/End: Original strand, 30521242 - 30521297
Alignment:
Q  252 tcatacctttctcggccttttggctaagatcaagtgtagtatttgttcttctcagt 307  Q
    |||||||||||||| |||||||||| |||||||||||||||| ||||||| |||||    
T  30521242 tcatacctttctcgaccttttggctgagatcaagtgtagtatctgttcttatcagt 30521297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 254 - 301
Target Start/End: Original strand, 8875691 - 8875738
Alignment:
Q  254 atacctttctcggccttttggctaagatcaagtgtagtatttgttctt 301  Q
    |||| |||| |||||||||||||||||||||||||| ||| |||||||    
T  8875691 atacatttcccggccttttggctaagatcaagtgtaatatctgttctt 8875738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 52; Significance: 8e-21; HSPs: 20)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 244 - 307
Target Start/End: Complemental strand, 14654455 - 14654392
Alignment:
Q  244 ctttccactcatacctttctcggccttttggctaagatcaagtgtagtatttgttcttctcagt 307  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||    
T  14654455 ctttcaactcatacctttctcggccttttggctaagatcaagtgtagtatctgttcttatcagt 14654392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 244 - 307
Target Start/End: Complemental strand, 14664246 - 14664183
Alignment:
Q  244 ctttccactcatacctttctcggccttttggctaagatcaagtgtagtatttgttcttctcagt 307  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||    
T  14664246 ctttcaactcatacctttctcggccttttggctaagatcaagtgtagtatctgttcttatcagt 14664183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 244 - 307
Target Start/End: Complemental strand, 14669824 - 14669761
Alignment:
Q  244 ctttccactcatacctttctcggccttttggctaagatcaagtgtagtatttgttcttctcagt 307  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||    
T  14669824 ctttcaactcatacctttctcggccttttggctaagatcaagtgtagtatctgttcttatcagt 14669761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 244 - 307
Target Start/End: Original strand, 14706080 - 14706143
Alignment:
Q  244 ctttccactcatacctttctcggccttttggctaagatcaagtgtagtatttgttcttctcagt 307  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||    
T  14706080 ctttcaactcatacctttctcggccttttggctaagatcaagtgtagtatctgttcttatcagt 14706143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 244 - 307
Target Start/End: Original strand, 14708570 - 14708633
Alignment:
Q  244 ctttccactcatacctttctcggccttttggctaagatcaagtgtagtatttgttcttctcagt 307  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||    
T  14708570 ctttcaactcatacctttctcggccttttggctaagatcaagtgtagtatctgttcttatcagt 14708633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 244 - 307
Target Start/End: Original strand, 14716283 - 14716346
Alignment:
Q  244 ctttccactcatacctttctcggccttttggctaagatcaagtgtagtatttgttcttctcagt 307  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||    
T  14716283 ctttcaactcatacctttctcggccttttggctaagatcaagtgtagtatctgttcttatcagt 14716346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 244 - 307
Target Start/End: Complemental strand, 28366314 - 28366251
Alignment:
Q  244 ctttccactcatacctttctcggccttttggctaagatcaagtgtagtatttgttcttctcagt 307  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||    
T  28366314 ctttcaactcatacctttctcggccttttggctaagatcaagtgtagtatctgttcttatcagt 28366251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 244 - 307
Target Start/End: Original strand, 33988062 - 33988125
Alignment:
Q  244 ctttccactcatacctttctcggccttttggctaagatcaagtgtagtatttgttcttctcagt 307  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||    
T  33988062 ctttcaactcatacctttctcggccttttggctaagatcaagtgtagtatctgttcttatcagt 33988125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 245 - 307
Target Start/End: Original strand, 14676625 - 14676687
Alignment:
Q  245 tttccactcatacctttctcggccttttggctaagatcaagtgtagtatttgttcttctcagt 307  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||    
T  14676625 tttcaactcatacctttctcggccttttggctaagatcaagtgtagtatctgttcttatcagt 14676687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 245 - 307
Target Start/End: Original strand, 14683743 - 14683805
Alignment:
Q  245 tttccactcatacctttctcggccttttggctaagatcaagtgtagtatttgttcttctcagt 307  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||    
T  14683743 tttcaactcatacctttctcggccttttggctaagatcaagtgtagtatctgttcttatcagt 14683805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 245 - 307
Target Start/End: Complemental strand, 38175644 - 38175582
Alignment:
Q  245 tttccactcatacctttctcggccttttggctaagatcaagtgtagtatttgttcttctcagt 307  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||    
T  38175644 tttcaactcatacctttctcggccttttggctaagatcaagtgtagtatctgttcttatcagt 38175582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 250 - 307
Target Start/End: Original strand, 14674479 - 14674536
Alignment:
Q  250 actcatacctttctcggccttttggctaagatcaagtgtagtatttgttcttctcagt 307  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||    
T  14674479 actcatacctttctcggccttttggctaagatcaagtgtagtatctgttcttatcagt 14674536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 250 - 307
Target Start/End: Original strand, 14679857 - 14679914
Alignment:
Q  250 actcatacctttctcggccttttggctaagatcaagtgtagtatttgttcttctcagt 307  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||    
T  14679857 actcatacctttctcggccttttggctaagatcaagtgtagtatctgttcttatcagt 14679914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 252 - 307
Target Start/End: Original strand, 14652525 - 14652580
Alignment:
Q  252 tcatacctttctcggccttttggctaagatcaagtgtagtatttgttcttctcagt 307  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||| |||||    
T  14652525 tcatacctttctcggccttttggctaagatcaagtgtagtatctgttcttatcagt 14652580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 252 - 307
Target Start/End: Original strand, 14662316 - 14662371
Alignment:
Q  252 tcatacctttctcggccttttggctaagatcaagtgtagtatttgttcttctcagt 307  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||| |||||    
T  14662316 tcatacctttctcggccttttggctaagatcaagtgtagtatctgttcttatcagt 14662371  T

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Target: chr1; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 250 - 301
Target Start/End: Complemental strand, 14667220 - 14667169
Alignment:
Q  250 actcatacctttctcggccttttggctaagatcaagtgtagtatttgttctt 301  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  14667220 actcatacctttctcggccttttggctaagatcaagtgtagtatctgttctt 14667169  T

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Target: chr1; HSP #17
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 245 - 307
Target Start/End: Original strand, 14681592 - 14681654
Alignment:
Q  245 tttccactcatacctttctcggccttttggctaagatcaagtgtagtatttgttcttctcagt 307  Q
    |||| ||| |||||||||||||||||||||||||||||||||||||||| ||||||| |||||    
T  14681592 tttcaacttatacctttctcggccttttggctaagatcaagtgtagtatctgttcttatcagt 14681654  T

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Target: chr1; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 258 - 307
Target Start/End: Original strand, 37422175 - 37422224
Alignment:
Q  258 ctttctcggccttttggctaagatcaagtgtagtatttgttcttctcagt 307  Q
    ||||||||||||||||||||||||||||||||| || ||||||| |||||    
T  37422175 ctttctcggccttttggctaagatcaagtgtagcatatgttcttatcagt 37422224  T

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Target: chr1; HSP #19
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 255 - 307
Target Start/End: Complemental strand, 11872585 - 11872533
Alignment:
Q  255 tacctttctcggccttttggctaagatcaagtgtagtatttgttcttctcagt 307  Q
    ||||||||||||||||||| ||||||||||||||| ||| ||||||| |||||    
T  11872585 tacctttctcggccttttgactaagatcaagtgtactatctgttcttatcagt 11872533  T

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Target: chr1; HSP #20
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 250 - 293
Target Start/End: Original strand, 28698551 - 28698594
Alignment:
Q  250 actcatacctttctcggccttttggctaagatcaagtgtagtat 293  Q
    |||||||| |||||||| ||||||||||||||||| ||||||||    
T  28698551 actcatacatttctcggtcttttggctaagatcaaatgtagtat 28698594  T

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Target: chr3 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 254 - 300
Target Start/End: Complemental strand, 15758608 - 15758562
Alignment:
Q  254 atacctttctcggccttttggctaagatcaagtgtagtatttgttct 300  Q
    ||||||||||| |||||||||||||||||||||||| ||| ||||||    
T  15758608 atacctttctcagccttttggctaagatcaagtgtaatatctgttct 15758562  T

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