View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5916_low_44 (Length: 258)
Name: NF5916_low_44
Description: NF5916
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5916_low_44 |
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Alignment Details
Target: chr2 (Bit Score: 230; Significance: 1e-127; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 230; E-Value: 1e-127
Query Start/End: Original strand, 18 - 247
Target Start/End: Complemental strand, 40371695 - 40371466
Alignment:
| Q |
18 |
acatccaccctactactacctatatttgcttacaccgaaccactctatatggtttaaaagatttaatataccctaataactaagggttaaggcttgcatg |
117 |
Q |
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| T |
40371695 |
acatccaccctactactacctatatttgcttacaccgaaccactctatatggtttaaaagatttaatataccctaataactaagggttaaggcttgcatg |
40371596 |
T |
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| Q |
118 |
tatatacataagttgttcggaatgaaataatcataaagtacatgtattaatcccaatgcaataagggtatccatctttcgtaccataacattctttgata |
217 |
Q |
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| T |
40371595 |
tatatacataagttgttcggaatgaaataatcataaagtacatgtattaatcccaatgcaataagggtatccatctttcgtaccataacattctttgata |
40371496 |
T |
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| Q |
218 |
tggtcagcaaatgtaattactcctaccttt |
247 |
Q |
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|||||||||||||||||||||||||||||| |
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| T |
40371495 |
tggtcagcaaatgtaattactcctaccttt |
40371466 |
T |
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