View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF5916_low_6 (Length: 592)

Name: NF5916_low_6
Description: NF5916
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF5916_low_6
NF5916_low_6
[»] chr4 (77 HSPs)
chr4 (212-468)||(393519-393766)
chr4 (223-424)||(1829752-1829953)
chr4 (222-459)||(40792749-40792984)
chr4 (222-434)||(1587180-1587392)
chr4 (209-420)||(1188828-1189039)
chr4 (222-424)||(6348153-6348354)
chr4 (225-461)||(52963570-52963806)
chr4 (250-461)||(52241035-52241245)
chr4 (219-401)||(6349490-6349674)
chr4 (219-445)||(23203849-23204074)
chr4 (222-338)||(4128991-4129107)
chr4 (222-438)||(42871093-42871308)
chr4 (220-438)||(1794407-1794627)
chr4 (222-333)||(24426337-24426448)
chr4 (225-420)||(27850857-27851047)
chr4 (221-420)||(52239874-52240074)
chr4 (222-334)||(37882832-37882944)
chr4 (259-441)||(7708688-7708869)
chr4 (220-420)||(44503599-44503798)
chr4 (221-369)||(390214-390361)
chr4 (222-420)||(2312400-2312600)
chr4 (222-420)||(11968509-11968708)
chr4 (218-369)||(37884249-37884399)
chr4 (241-439)||(53435654-53435852)
chr4 (222-367)||(2310921-2311065)
chr4 (224-420)||(42810123-42810319)
chr4 (219-334)||(44501513-44501628)
chr4 (222-336)||(1831267-1831381)
chr4 (224-412)||(27847678-27847865)
chr4 (221-336)||(1190196-1190311)
chr4 (222-383)||(1588044-1588207)
chr4 (357-459)||(2311086-2311188)
chr4 (222-384)||(4871320-4871482)
chr4 (250-422)||(10168700-10168873)
chr4 (241-434)||(53432079-53432272)
chr4 (215-424)||(49343925-49344135)
chr4 (218-424)||(53205399-53205605)
chr4 (250-420)||(7707614-7707786)
chr4 (224-335)||(31965835-31965946)
chr4 (247-366)||(54485519-54485638)
chr4 (216-434)||(13165488-13165705)
chr4 (222-335)||(31968397-31968510)
chr4 (250-412)||(13533189-13533350)
chr4 (225-331)||(42872308-42872414)
chr4 (222-420)||(15449994-15450193)
chr4 (248-392)||(49342643-49342787)
chr4 (250-392)||(33231415-33231558)
chr4 (248-366)||(54484336-54484455)
chr4 (249-377)||(11438531-11438659)
chr4 (250-376)||(14524815-14524941)
chr4 (218-360)||(54866612-54866752)
chr4 (300-392)||(13166717-13166809)
chr4 (250-392)||(50546932-50547075)
chr4 (241-336)||(53204378-53204473)
chr4 (222-336)||(10167423-10167537)
chr4 (250-336)||(23201872-23201958)
chr4 (260-390)||(40723264-40723393)
chr4 (340-420)||(56085463-56085543)
chr4 (222-424)||(4714017-4714220)
chr4 (341-420)||(22069352-22069431)
chr4 (253-335)||(50548228-50548310)
chr4 (295-372)||(5591418-5591495)
chr4 (295-372)||(48126875-48126952)
chr4 (250-334)||(54865131-54865214)
chr4 (342-420)||(4871611-4871690)
chr4 (342-412)||(28657046-28657116)
chr4 (238-303)||(28590942-28591007)
chr4 (342-419)||(44498579-44498656)
chr4 (348-424)||(56000408-56000484)
chr4 (399-445)||(2974399-2974445)
chr4 (374-424)||(17494274-17494324)
chr4 (238-307)||(669678-669747)
chr4 (339-420)||(1519926-1520006)
chr4 (338-410)||(26496239-26496312)
chr4 (241-301)||(28589798-28589858)
chr4 (236-276)||(44498472-44498512)
chr4 (236-276)||(49895052-49895092)
[»] chr5 (37 HSPs)
chr5 (222-434)||(325092-325303)
chr5 (225-459)||(39605349-39605584)
chr5 (220-441)||(30912062-30912282)
chr5 (224-420)||(39603853-39604051)
chr5 (222-392)||(22047730-22047902)
chr5 (220-413)||(30857796-30857988)
chr5 (224-420)||(27705235-27705432)
chr5 (218-373)||(22049104-22049258)
chr5 (217-418)||(22308721-22308922)
chr5 (238-410)||(8521269-8521440)
chr5 (222-420)||(30859090-30859290)
chr5 (238-391)||(1010314-1010466)
chr5 (222-434)||(33173865-33174078)
chr5 (217-420)||(30910734-30910939)
chr5 (339-434)||(1102733-1102828)
chr5 (218-336)||(22307502-22307620)
chr5 (222-331)||(15941272-15941380)
chr5 (238-377)||(32757839-32757978)
chr5 (222-336)||(34894147-34894261)
chr5 (214-283)||(41798004-41798074)
chr5 (295-410)||(324109-324225)
chr5 (236-336)||(24509040-24509140)
chr5 (238-336)||(24503198-24503296)
chr5 (250-412)||(9169612-9169774)
chr5 (247-423)||(11263615-11263789)
chr5 (222-328)||(34898963-34899069)
chr5 (250-392)||(8523693-8523836)
chr5 (342-392)||(4127201-4127251)
chr5 (247-289)||(11262279-11262321)
chr5 (295-420)||(10735834-10735959)
chr5 (222-267)||(15941409-15941454)
chr5 (238-307)||(32759081-32759150)
chr5 (342-422)||(35081355-35081435)
chr5 (250-288)||(20538079-20538117)
chr5 (237-274)||(324080-324117)
chr5 (295-392)||(33172624-33172720)
chr5 (236-276)||(9220524-9220564)
[»] chr7 (63 HSPs)
chr7 (218-424)||(47454331-47454536)
chr7 (221-459)||(32256277-32256514)
chr7 (213-459)||(43459443-43459690)
chr7 (222-424)||(6173369-6173568)
chr7 (219-445)||(11501175-11501400)
chr7 (238-450)||(41079726-41079936)
chr7 (222-423)||(47456300-47456493)
chr7 (253-459)||(22337252-22337457)
chr7 (250-461)||(40812489-40812703)
chr7 (238-420)||(32255003-32255187)
chr7 (217-335)||(33096862-33096980)
chr7 (221-461)||(22538727-22538967)
chr7 (221-434)||(40509640-40509853)
chr7 (238-346)||(30333299-30333407)
chr7 (222-369)||(30310119-30310266)
chr7 (225-420)||(43460742-43460938)
chr7 (223-424)||(40508377-40508578)
chr7 (221-434)||(22115070-22115284)
chr7 (223-334)||(45455378-45455489)
chr7 (220-434)||(4299954-4300168)
chr7 (250-408)||(47060408-47060565)
chr7 (217-334)||(32602926-32603043)
chr7 (222-412)||(47059106-47059297)
chr7 (218-434)||(3413526-3413742)
chr7 (250-413)||(13562848-13563010)
chr7 (250-382)||(30334599-30334727)
chr7 (221-420)||(22335976-22336176)
chr7 (222-335)||(45454036-45454149)
chr7 (238-392)||(41078770-41078925)
chr7 (222-334)||(4298711-4298823)
chr7 (250-420)||(13564158-13564329)
chr7 (220-335)||(30311474-30311589)
chr7 (222-391)||(33779036-33779202)
chr7 (250-412)||(9662165-9662326)
chr7 (246-424)||(24282892-24283069)
chr7 (222-278)||(40811338-40811394)
chr7 (92-158)||(5373510-5373576)
chr7 (225-361)||(46835676-46835810)
chr7 (248-334)||(11344531-11344614)
chr7 (222-392)||(11502368-11502540)
chr7 (343-421)||(44554687-44554764)
chr7 (248-410)||(46201155-46201317)
chr7 (217-335)||(40738843-40738962)
chr7 (342-420)||(2414863-2414941)
chr7 (247-336)||(24281097-24281187)
chr7 (247-335)||(3414839-3414927)
chr7 (222-334)||(35664287-35664399)
chr7 (250-361)||(25533214-25533325)
chr7 (260-353)||(22537595-22537686)
chr7 (342-436)||(35295817-35295911)
chr7 (343-408)||(7354623-7354688)
chr7 (241-305)||(38539688-38539752)
chr7 (364-434)||(22691109-22691179)
chr7 (333-434)||(669295-669395)
chr7 (339-387)||(15992250-15992298)
chr7 (340-424)||(16755987-16756071)
chr7 (338-392)||(39981430-39981485)
chr7 (342-392)||(43441464-43441514)
chr7 (338-410)||(41328332-41328405)
chr7 (236-273)||(44372741-44372778)
chr7 (236-273)||(44381597-44381634)
chr7 (236-276)||(9081405-9081445)
chr7 (301-434)||(40811397-40811531)
[»] scaffold0034 (2 HSPs)
scaffold0034 (222-445)||(109641-109863)
scaffold0034 (250-335)||(108539-108624)
[»] chr3 (70 HSPs)
chr3 (222-459)||(40244185-40244421)
chr3 (220-445)||(34818082-34818306)
chr3 (222-445)||(38240904-38241125)
chr3 (250-459)||(27837946-27838154)
chr3 (215-392)||(38242463-38242641)
chr3 (222-424)||(18197145-18197339)
chr3 (222-412)||(53624290-53624479)
chr3 (259-423)||(10730920-10731083)
chr3 (250-445)||(35372055-35372248)
chr3 (222-445)||(41263636-41263858)
chr3 (218-434)||(53420313-53420527)
chr3 (220-406)||(12107912-12108103)
chr3 (238-366)||(50809435-50809563)
chr3 (238-366)||(50810808-50810936)
chr3 (238-366)||(50864928-50865056)
chr3 (238-366)||(50866299-50866427)
chr3 (222-458)||(26887437-26887673)
chr3 (248-369)||(53194841-53194962)
chr3 (249-459)||(40745347-40745557)
chr3 (222-336)||(53187557-53187670)
chr3 (222-334)||(37735304-37735416)
chr3 (240-332)||(37736089-37736181)
chr3 (247-434)||(42684899-42685086)
chr3 (250-413)||(53612897-53613059)
chr3 (222-334)||(36176512-36176625)
chr3 (222-335)||(40364317-40364430)
chr3 (325-445)||(3209862-3209982)
chr3 (225-334)||(18458663-18458772)
chr3 (258-420)||(20288144-20288306)
chr3 (250-336)||(53421765-53421851)
chr3 (223-330)||(34819295-34819401)
chr3 (238-335)||(41544676-41544773)
chr3 (214-390)||(53622651-53622830)
chr3 (250-392)||(3208510-3208653)
chr3 (278-367)||(36175317-36175405)
chr3 (222-289)||(3209982-3210049)
chr3 (250-410)||(3455554-3455715)
chr3 (225-334)||(23443463-23443572)
chr3 (279-411)||(12106629-12106760)
chr3 (247-377)||(18442275-18442401)
chr3 (247-377)||(19487349-19487475)
chr3 (250-424)||(24403265-24403439)
chr3 (220-334)||(41264659-41264773)
chr3 (379-445)||(42592693-42592759)
chr3 (222-287)||(12105288-12105353)
chr3 (295-420)||(20314684-20314809)
chr3 (295-420)||(20336577-20336702)
chr3 (259-420)||(10732048-10732210)
chr3 (258-334)||(28909611-28909687)
chr3 (222-335)||(53614278-53614391)
chr3 (222-288)||(35370911-35370977)
chr3 (218-336)||(38247480-38247598)
chr3 (342-412)||(55423511-55423581)
chr3 (219-288)||(3817315-3817384)
chr3 (250-335)||(26886298-26886383)
chr3 (241-334)||(42686151-42686244)
chr3 (265-333)||(3807980-3808048)
chr3 (326-434)||(7270425-7270533)
chr3 (250-314)||(55328331-55328395)
chr3 (217-288)||(3811520-3811591)
chr3 (345-436)||(14745104-14745195)
chr3 (342-412)||(31282466-31282536)
chr3 (342-436)||(48083345-48083439)
chr3 (359-424)||(35371043-35371108)
chr3 (338-410)||(49379815-49379888)
chr3 (236-276)||(10301882-10301922)
chr3 (340-424)||(10338854-10338938)
chr3 (339-410)||(13621034-13621106)
chr3 (348-424)||(43346366-43346442)
chr3 (265-333)||(44182323-44182391)
[»] chr1 (53 HSPs)
chr1 (213-424)||(27814281-27814492)
chr1 (221-434)||(50444605-50444817)
chr1 (250-445)||(16963860-16964054)
chr1 (218-445)||(15233938-15234163)
chr1 (222-420)||(15072710-15072908)
chr1 (221-424)||(14477707-14477910)
chr1 (250-440)||(49802796-49802985)
chr1 (279-434)||(46110337-46110491)
chr1 (222-335)||(45585014-45585127)
chr1 (222-434)||(14470854-14471066)
chr1 (222-424)||(46111412-46111606)
chr1 (224-408)||(35943379-35943563)
chr1 (221-377)||(52628837-52628992)
chr1 (222-392)||(23091349-23091520)
chr1 (212-434)||(41873877-41874100)
chr1 (222-335)||(15071340-15071453)
chr1 (222-328)||(34351968-34352074)
chr1 (247-408)||(16123310-16123471)
chr1 (250-335)||(44278354-44278439)
chr1 (250-438)||(46467172-46467359)
chr1 (222-333)||(52627513-52627625)
chr1 (238-377)||(24499619-24499757)
chr1 (250-438)||(15746669-15746856)
chr1 (222-334)||(41872574-41872686)
chr1 (213-353)||(50442614-50442753)
chr1 (250-377)||(44276148-44276274)
chr1 (238-333)||(51042350-51042444)
chr1 (260-392)||(49801653-49801786)
chr1 (341-434)||(48527651-48527744)
chr1 (217-410)||(15232745-15232939)
chr1 (303-410)||(44999392-44999499)
chr1 (258-424)||(30535586-30535751)
chr1 (5-87)||(31587130-31587212)
chr1 (340-421)||(48492844-48492925)
chr1 (250-367)||(46318590-46318707)
chr1 (250-390)||(48096982-48097121)
chr1 (222-288)||(33369247-33369313)
chr1 (241-307)||(42245920-42245986)
chr1 (371-424)||(51300176-51300229)
chr1 (344-420)||(13147336-13147412)
chr1 (340-408)||(16757456-16757524)
chr1 (342-420)||(9226135-9226213)
chr1 (343-420)||(6049345-6049422)
chr1 (260-420)||(16965045-16965207)
chr1 (340-392)||(3617445-3617497)
chr1 (250-305)||(42244657-42244712)
chr1 (342-412)||(21507183-21507253)
chr1 (341-423)||(32693325-32693407)
chr1 (333-434)||(12665900-12666000)
chr1 (317-390)||(18821689-18821762)
chr1 (338-410)||(51445703-51445776)
chr1 (342-394)||(10711906-10711958)
chr1 (372-424)||(50442752-50442804)
[»] chr2 (47 HSPs)
chr2 (218-445)||(32470471-32470697)
chr2 (222-420)||(43033080-43033277)
chr2 (215-413)||(17460612-17460809)
chr2 (238-413)||(11315947-11316121)
chr2 (220-420)||(11317287-11317488)
chr2 (250-445)||(1083014-1083208)
chr2 (222-408)||(28562742-28562927)
chr2 (225-411)||(43034399-43034586)
chr2 (295-459)||(6028787-6028952)
chr2 (222-335)||(7437766-7437879)
chr2 (222-387)||(17459251-17459418)
chr2 (218-411)||(7436461-7436652)
chr2 (224-333)||(28561368-28561477)
chr2 (222-335)||(32469146-32469260)
chr2 (250-420)||(29219411-29219583)
chr2 (250-420)||(29332710-29332882)
chr2 (225-335)||(42641866-42641975)
chr2 (251-445)||(6032209-6032403)
chr2 (214-434)||(6030375-6030597)
chr2 (250-420)||(18616924-18617096)
chr2 (215-413)||(29220804-29221001)
chr2 (215-413)||(29334103-29334300)
chr2 (223-413)||(18615515-18615704)
chr2 (218-328)||(36010571-36010681)
chr2 (258-434)||(34464002-34464178)
chr2 (238-424)||(2277385-2277571)
chr2 (221-414)||(11547656-11547851)
chr2 (238-377)||(34147150-34147289)
chr2 (250-372)||(35903534-35903656)
chr2 (250-411)||(21664829-21664989)
chr2 (258-420)||(34512848-34513008)
chr2 (260-434)||(34513459-34513633)
chr2 (240-353)||(12359666-12359779)
chr2 (223-334)||(34468957-34469068)
chr2 (223-334)||(36011648-36011758)
chr2 (222-336)||(6030603-6030717)
chr2 (238-411)||(37956963-37957135)
chr2 (325-420)||(34467607-34467702)
chr2 (238-307)||(2276295-2276364)
chr2 (340-392)||(4921006-4921059)
chr2 (238-307)||(34148393-34148462)
chr2 (250-305)||(30749328-30749383)
chr2 (250-288)||(44191162-44191200)
chr2 (222-275)||(6028743-6028796)
chr2 (388-424)||(12095440-12095476)
chr2 (340-392)||(16295165-16295217)
chr2 (236-276)||(23233760-23233800)
[»] chr8 (62 HSPs)
chr8 (217-459)||(32797131-32797376)
chr8 (222-434)||(30786674-30786887)
chr8 (217-445)||(32693823-32694050)
chr8 (250-461)||(42099985-42100196)
chr8 (225-445)||(41629709-41629928)
chr8 (222-459)||(13116328-13116565)
chr8 (239-434)||(22551022-22551216)
chr8 (222-434)||(32798437-32798650)
chr8 (222-440)||(44076261-44076481)
chr8 (247-445)||(45279703-45279900)
chr8 (220-399)||(30787542-30787720)
chr8 (247-420)||(6397806-6397978)
chr8 (221-361)||(4810466-4810605)
chr8 (222-412)||(42872118-42872307)
chr8 (218-434)||(8571522-8571739)
chr8 (221-434)||(42870810-42871025)
chr8 (217-362)||(28418799-28418944)
chr8 (220-336)||(8570114-8570230)
chr8 (222-335)||(26696530-26696643)
chr8 (222-390)||(45281138-45281306)
chr8 (238-366)||(28420148-28420276)
chr8 (250-424)||(38696334-38696508)
chr8 (250-410)||(42877645-42877804)
chr8 (222-420)||(32695193-32695393)
chr8 (222-410)||(42098561-42098750)
chr8 (218-423)||(212630-212834)
chr8 (218-423)||(239420-239624)
chr8 (218-423)||(726253-726457)
chr8 (218-423)||(792775-792979)
chr8 (218-423)||(798754-798958)
chr8 (222-361)||(41630105-41630242)
chr8 (241-336)||(211612-211707)
chr8 (241-336)||(240549-240644)
chr8 (241-336)||(725235-725330)
chr8 (241-336)||(793904-793999)
chr8 (212-320)||(13197961-13198070)
chr8 (222-360)||(17339530-17339667)
chr8 (216-386)||(17702227-17702399)
chr8 (250-334)||(17338067-17338151)
chr8 (341-460)||(17455164-17455283)
chr8 (241-412)||(45394984-45395155)
chr8 (222-410)||(13117562-13117751)
chr8 (260-377)||(26697796-26697912)
chr8 (250-369)||(41743586-41743705)
chr8 (250-420)||(14840819-14840989)
chr8 (250-360)||(45437462-45437572)
chr8 (222-270)||(12850465-12850513)
chr8 (236-419)||(24192584-24192767)
chr8 (264-335)||(29103527-29103598)
chr8 (255-334)||(29104371-29104450)
chr8 (339-412)||(42362678-42362751)
chr8 (238-334)||(38697012-38697108)
chr8 (236-276)||(10667981-10668021)
chr8 (340-392)||(10669393-10669445)
chr8 (341-412)||(24305159-24305230)
chr8 (369-420)||(40437516-40437567)
chr8 (260-334)||(6398503-6398577)
chr8 (342-410)||(9854809-9854878)
chr8 (379-424)||(13513572-13513617)
chr8 (379-424)||(13603105-13603150)
chr8 (348-424)||(24069365-24069441)
chr8 (348-424)||(34617114-34617190)
[»] scaffold0077 (2 HSPs)
scaffold0077 (250-442)||(52618-52809)
scaffold0077 (217-420)||(54103-54308)
[»] scaffold0031 (2 HSPs)
scaffold0031 (223-420)||(125150-125350)
scaffold0031 (218-392)||(123963-124136)
[»] chr6 (31 HSPs)
chr6 (250-459)||(23397235-23397444)
chr6 (220-459)||(29380187-29380426)
chr6 (222-459)||(17839020-17839257)
chr6 (223-398)||(7310275-7310449)
chr6 (220-366)||(232172-232316)
chr6 (222-320)||(34023884-34023982)
chr6 (247-418)||(12669746-12669917)
chr6 (222-335)||(6452516-6452629)
chr6 (250-411)||(5186594-5186753)
chr6 (220-392)||(7311672-7311844)
chr6 (250-390)||(32506976-32507116)
chr6 (222-331)||(34024073-34024181)
chr6 (222-335)||(6452282-6452395)
chr6 (225-334)||(27080925-27081034)
chr6 (212-334)||(6701368-6701490)
chr6 (221-360)||(6702852-6702989)
chr6 (250-420)||(23392240-23392411)
chr6 (238-333)||(15730036-15730132)
chr6 (238-366)||(233543-233666)
chr6 (250-420)||(5187541-5187712)
chr6 (224-334)||(27967055-27967165)
chr6 (222-335)||(2687929-2688042)
chr6 (224-313)||(27082171-27082261)
chr6 (218-420)||(17837610-17837813)
chr6 (250-336)||(2687256-2687342)
chr6 (250-335)||(18346755-18346840)
chr6 (250-415)||(29722689-29722853)
chr6 (222-420)||(29381649-29381848)
chr6 (342-420)||(11967334-11967412)
chr6 (348-422)||(27082093-27082167)
chr6 (338-410)||(11722899-11722972)
[»] scaffold1152 (1 HSPs)
scaffold1152 (222-413)||(2403-2593)
[»] scaffold0118 (1 HSPs)
scaffold0118 (238-420)||(43493-43677)
[»] scaffold0019 (2 HSPs)
scaffold0019 (225-434)||(63037-63246)
scaffold0019 (238-334)||(61865-61961)
[»] scaffold0201 (1 HSPs)
scaffold0201 (222-434)||(21125-21337)
[»] scaffold0078 (1 HSPs)
scaffold0078 (225-336)||(18813-18924)
[»] scaffold0011 (1 HSPs)
scaffold0011 (250-420)||(127459-127629)
[»] scaffold2071 (1 HSPs)
scaffold2071 (250-434)||(587-771)
[»] scaffold1251 (1 HSPs)
scaffold1251 (238-377)||(1048-1187)
[»] scaffold0013 (1 HSPs)
scaffold0013 (250-412)||(32598-32758)
[»] scaffold0219 (1 HSPs)
scaffold0219 (295-420)||(8111-8235)


Alignment Details
Target: chr4 (Bit Score: 165; Significance: 6e-88; HSPs: 77)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 165; E-Value: 6e-88
Query Start/End: Original strand, 212 - 468
Target Start/End: Complemental strand, 393766 - 393519
Alignment:
Q  212 aatttattttggcttatttgatcgaatggtccctcaaataatttcaagttttcattttggtcccacaattaataaaacgtatcttttggtccctcacttt 311  Q
    ||||| ||||||||||||||||| || |||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  393766 aattttttttggcttatttgatccaacggtccctcaaataatttcaaattttcattttggtcccacaattaataaaaagtatcttttggtccctcacttt 393667  T
Q  312 tttctccgtttgccaaataaatcccgaactgttaactttaactccaaatgtctatggtagaccaaccttaaaagtggtccatcgtagaccttattaattt 411  Q
    |||||||||||||||||||||||||| |||||||||||||| || |||||| ||| || |||||||||||||||||||||||||||||||||||||||      
T  393666 tttctccgtttgccaaataaatcccggactgttaactttaattctaaatgtttatagtggaccaaccttaaaagtggtccatcgtagaccttattaat-- 393569  T
Q  412 tattaattttaacagttcgatctatttatcataataggaccgttagatttatcataa 468  Q
           ||||||   || ||||||||||||||||||||||||||||||||||||||    
T  393568 -------tttaaccaatcaatctatttatcataataggaccgttagatttatcataa 393519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 139; E-Value: 2e-72
Query Start/End: Original strand, 223 - 424
Target Start/End: Original strand, 1829752 - 1829953
Alignment:
Q  223 gcttatttgatcgaatggtccctcaaataatttcaagttttcattttggtcccacaattaataaaacgtatcttttggtccctcacttttttctccgttt 322  Q
    |||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| || |||||    
T  1829752 gcttatttgatccaacggtccctcaaataatttcaagttttcattttggtcccacaattaataaaacgtatcttttagtccctcactttttcctacgttt 1829851  T
Q  323 gccaaataaatcccgaactgttaac-tttaactccaaatgtctatggtagaccaaccttaaaagtggtccatcgtagaccttattaattttattaatttt 421  Q
    | ||||||||| ||| ||||||||| |||||||| |||||||||| || ||||||| |||||||||||||||||||||||||||||||||||||||| ||    
T  1829852 gtcaaataaattccg-actgttaacttttaactctaaatgtctatcgtggaccaactttaaaagtggtccatcgtagaccttattaattttattaatctt 1829950  T
Q  422 aac 424  Q
    |||    
T  1829951 aac 1829953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 129; E-Value: 2e-66
Query Start/End: Original strand, 222 - 459
Target Start/End: Original strand, 40792749 - 40792984
Alignment:
Q  222 ggcttatttgatcgaatggtccctcaaataatttcaagttttcattttggtcccacaattaataaaacgtatcttttggtccctcacttttttctccgtt 321  Q
    ||||||||||||  ||||||||   || |||||| ||||||||||||||||||||||||||||||||| ||  |||||||||||||  ||||||||||||    
T  40792749 ggcttatttgatttaatggtcctctaattaattttaagttttcattttggtcccacaattaataaaacatacattttggtccctcagatttttctccgtt 40792848  T
Q  322 tgccaaataaatcccgaactgttaactttaactccaaatgtctatggtagaccaaccttaaaagtggtccatcgtagaccttattaattttattaatttt 421  Q
    |||||||||||||||||   |||||||||||||  |||||||||| || |||||||||||||||||||| || |||||||||||||||||| ||||||||    
T  40792849 tgccaaataaatcccga---gttaactttaactttaaatgtctatagtggaccaaccttaaaagtggtctatggtagaccttattaattttcttaatttt 40792945  T
Q  422 aacagttcgatctatttatcataata-ggaccgttagat 459  Q
    | | |||||||||||||||||||| | ||||||||||||    
T  40792946 atccgttcgatctatttatcataaaagggaccgttagat 40792984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 122; E-Value: 3e-62
Query Start/End: Original strand, 222 - 434
Target Start/End: Original strand, 1587180 - 1587392
Alignment:
Q  222 ggcttatttgatcgaatggtccctcaaataatttcaagttttcattttggtcccacaattaataaaacgtatcttttggtccctcacttttttctccgtt 321  Q
    ||||||||||||| || ||||||||||||||||| || |||||||||| ||| |||||||||||||||||| |||||||||||||||||||| |||||||    
T  1587180 ggcttatttgatccaacggtccctcaaataattttaaattttcattttagtctcacaattaataaaacgtaccttttggtccctcactttttcctccgtt 1587279  T
Q  322 tgccaaataaatcccgaactgttaac-tttaactccaaatgtctatggtagaccaaccttaaaagtggtccatcgtagaccttattaattttattaattt 420  Q
    |||||||||||||||| |  |||||| |||||||| |||||||||| |||||||||| ||||||||| ||||||||| |||||||||||||| ||||| |    
T  1587280 tgccaaataaatcccg-atggttaacttttaactctaaatgtctatagtagaccaactttaaaagtgttccatcgtataccttattaattttgttaatct 1587378  T
Q  421 taacagttcgatct 434  Q
    |||| ||| |||||    
T  1587379 taaccgtttgatct 1587392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 121; E-Value: 1e-61
Query Start/End: Original strand, 209 - 420
Target Start/End: Original strand, 1188828 - 1189039
Alignment:
Q  209 gacaatttattttggcttatttgatcgaatggtccctcaaataatttcaagttttcattttggtcccacaattaataaaacgtatcttttggtccctcac 308  Q
    ||||||| |||||||||||||||||| ||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||  ||||||||||||||    
T  1188828 gacaattaattttggcttatttgatccaatagtccctcaaataatttcaagtttttattttggtcccacaattaataaaacgtacattttggtccctcac 1188927  T
Q  309 ttttttctccgtttgccaaataaatcccgaactgttaac-tttaactccaaatgtctatggtagaccaaccttaaaagtggtccatcgtagaccttatta 407  Q
    ||||| |||||||||||||||||||||||||| |||||| |||||| | |||||||||||||  |||||| ||  | |||||||| ||||||||||| ||    
T  1188928 tttttcctccgtttgccaaataaatcccgaac-gttaacttttaaccctaaatgtctatggtgaaccaacattgtaggtggtccaccgtagaccttaata 1189026  T
Q  408 attttattaattt 420  Q
    ||||  |||||||    
T  1189027 atttgcttaattt 1189039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 119; E-Value: 2e-60
Query Start/End: Original strand, 222 - 424
Target Start/End: Original strand, 6348153 - 6348354
Alignment:
Q  222 ggcttatttgatcgaatggtccctcaaataatttcaagttttcattttggtcccacaattaataaaacgtatcttttggtccctcacttttttctccgtt 321  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||| ||| |||    
T  6348153 ggcttatttgatcaaatggtccctcaaataatttcaagttttcattttggtcccacaattaataaaacgtaccttttggttcctcactttttcctctgtt 6348252  T
Q  322 tgccaaataaatcccgaactgttaactttaactccaaatgtctatggtagaccaaccttaaaagtggtccatcgtagaccttattaattttattaatttt 421  Q
    || ||||||||| | | |  ||||| ||||||  |||||||||||||| |||||||||||| ||||||||| |||||||||||||||| ||  |||||||    
T  6348253 tgtcaaataaattctg-atggttaagtttaacctcaaatgtctatggtggaccaaccttaagagtggtccaccgtagaccttattaatatttctaatttt 6348351  T
Q  422 aac 424  Q
    |||    
T  6348352 aac 6348354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 118; E-Value: 6e-60
Query Start/End: Original strand, 225 - 461
Target Start/End: Original strand, 52963570 - 52963806
Alignment:
Q  225 ttatttgatcgaatggtccctcaaataatttcaagttttcattttggtcccacaattaataaaacgtatcttttggtccctcacttttttctccgtttgc 324  Q
    |||||||||| | ||||||   ||||||||||||||||||||||||||| ||||||||||||| ||||| |||||||||||||  ||||||||||||||     
T  52963570 ttatttgatcaattggtcctctaaataatttcaagttttcattttggtctcacaattaataaatcgtatgttttggtccctcaagtttttctccgtttgt 52963669  T
Q  325 caaataaatcccgaactgttaactttaactccaaatgtctatggtagaccaaccttaaaagtggtccatcgtagaccttattaattttattaattttaac 424  Q
    |||||||||| || ||||||||||||||||||||||||||||||| ||||| |||||||||||||||||| ||||||||  ||| ||| ||| |||||||    
T  52963670 caaataaatctcg-actgttaactttaactccaaatgtctatggtggaccagccttaaaagtggtccatcatagaccttcataaatttgttagttttaac 52963768  T
Q  425 agttcgatctatttatcataata-ggaccgttagattt 461  Q
      || ||||||||||| |||| | |||| |||||||||    
T  52963769 ctttagatctatttatgataaaagggacggttagattt 52963806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 250 - 461
Target Start/End: Complemental strand, 52241245 - 52241035
Alignment:
Q  250 taatttcaagttttcattttggtcccacaattaataaaacgtatcttttggtccctcacttttttctccgtttgccaaataaatcccgaactgttaactt 349  Q
    |||||||| |||||||||||| | |||||||||||||||||||  ||||| | |||||  |||| ||||||||||||||||||| ||| || ||||||||    
T  52241245 taatttcatgttttcattttgattccacaattaataaaacgtacgttttgattcctcatcttttcctccgtttgccaaataaattccg-accgttaactt 52241147  T
Q  350 taactccaaatgtctatggtagaccaaccttaaaagtggtccatcgtagaccttattaattttattaattttaacagttcgatctatttatcataata-g 448  Q
    ||||||||||| |||||||| ||||| |||||||||||||||||  |||||||||||| |||| ||||||||| |  ||||||||||||||||||| | |    
T  52241146 taactccaaatatctatggt-gaccatccttaaaagtggtccatgatagaccttattagttttgttaattttatccattcgatctatttatcataaaagg 52241048  T
Q  449 gaccgttagattt 461  Q
    ||| |||||||||    
T  52241047 gacagttagattt 52241035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 96; E-Value: 9e-47
Query Start/End: Original strand, 219 - 401
Target Start/End: Complemental strand, 6349674 - 6349490
Alignment:
Q  219 tttggcttatttgatcgaatggtccctcaaataatttcaagttttcattttggtcccacaattaataaaacgtatcttttggtccctcacttttttctcc 318  Q
    |||||| ||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||  |||    
T  6349674 tttggcctatttgattcaatggtccctcaaataatttcaagttttcattttggtcccacaattaataaaacgtaccttttggtccctcaccttttcttcc 6349575  T
Q  319 gtttgccaaataaatcccgaactgttaactttaactccaa---atgtctatggtagaccaaccttaaaagtggtccatcgtagacc 401  Q
    |||| ||||||| ||||||||| ||||| |||||| ||||   |||| |||||| || ||||||||| ||||||||| | ||||||    
T  6349574 gtttaccaaatagatcccgaac-gttaagtttaaccccaaatgatgtatatggtggatcaaccttaagagtggtccaccatagacc 6349490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 219 - 445
Target Start/End: Complemental strand, 23204074 - 23203849
Alignment:
Q  219 tttggcttatttgatcgaatggtccctcaaataatttcaagttttcattttggtcccacaattaataaaacgtatcttttggtccctcacttttttctcc 318  Q
    ||||||||||| |||||  |||||||| |  ||||||||  ||||||||||||||||||| |||||||||      ||||||||| |||  |||||||||    
T  23204074 tttggcttattagatcgtttggtcccttatttaatttcatattttcattttggtcccacatttaataaaaatggcgttttggtccgtcatctttttctcc 23203975  T
Q  319 gtttgccaaataaatcccgaactgttaactttaactccaaatgtctatggtagaccaaccttaaaagtggtccatcgtagaccttattaattttattaat 418  Q
    ||||||||| |||||||| || | ||||||||||||| |||| |||||||| || ||||||||||||||||| || |||||||||||||||||| |||||    
T  23203974 gtttgccaattaaatccc-aagtattaactttaactctaaatatctatggtggatcaaccttaaaagtggtctattgtagaccttattaattttgttaat 23203876  T
Q  419 tttaacagttcgatctatttatcataa 445  Q
    ||||||  |||||| ||||||||||||    
T  23203875 tttaaccattcgatatatttatcataa 23203849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 222 - 338
Target Start/End: Original strand, 4128991 - 4129107
Alignment:
Q  222 ggcttatttgatcgaatggtccctcaaataatttcaagttttcattttggtcccacaattaataaaacgtatcttttggtccctcacttttttctccgtt 321  Q
    ||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||| |||  ||||||||||| |||||||||||||||    
T  4128991 ggcttatttgatccaatggttcctcaaataatttcaagttttcattttggtcccacaattaataaaatgtacattttggtcccttacttttttctccgtt 4129090  T
Q  322 tgccaaataaatcccga 338  Q
    |||||||||||||||||    
T  4129091 tgccaaataaatcccga 4129107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 222 - 438
Target Start/End: Original strand, 42871093 - 42871308
Alignment:
Q  222 ggcttatttgatcgaatggtccctcaaataatttcaagttttcattttggtcccacaattaataaaacgtatcttttggtccctcacttttttctccgtt 321  Q
    ||||||||||||| |||||||||   | ||||||||| ||||||||||| |||||||||||||||||||||  ||||||||||||||||||| |||||||    
T  42871093 ggcttatttgatccaatggtcccctgattaatttcaaattttcattttgatcccacaattaataaaacgtacgttttggtccctcactttttcctccgtt 42871192  T
Q  322 tgccaaataaatcccgaactgttaactttaactccaaatgtctatggtagaccaaccttaaaagtggtccatcgtagaccttattaattttattaatttt 421  Q
    |||||||||||||| | |||||||| ||||| |||||||||||| ||| || |||| ||| |  | ||||| |||||||| |||||||||  |||||||     
T  42871193 tgccaaataaatcctg-actgttaagtttaattccaaatgtctacggtggatcaacattatatatagtccaccgtagaccctattaatttctttaattta 42871291  T
Q  422 aacagttcgatctattt 438  Q
    |||  |||||| |||||    
T  42871292 aactattcgatttattt 42871308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 220 - 438
Target Start/End: Original strand, 1794407 - 1794627
Alignment:
Q  220 ttggcttatttgatcgaatggtccctcaaataatttcaagttttcattttggtcccacaattaataaaacgtatcttttggtccctcacttttttctccg 319  Q
    ||||||||||||||  ||||||||||||||||||||||||||||||||||| || ||||||||||||||  || |||||| ||||||||||||| ||| |    
T  1794407 ttggcttatttgattcaatggtccctcaaataatttcaagttttcattttgatctcacaattaataaaatataccttttgatccctcactttttcctctg 1794506  T
Q  320 tttgccaaataaatcccgaactgttaactttaactccaa---atgtctatggtagaccaaccttaaaagtggtccatcgtagaccttattaattttatta 416  Q
    |||| ||||||||| || ||| ||||| |||||  ||||   |||| |||||| |||||||||||| ||||||||| | ||||||||||||| ||| |||    
T  1794507 tttgtcaaataaat-cctaacggttaagtttaatcccaaatgatgtatatggtggaccaaccttaagagtggtccaccatagaccttattaaatttttta 1794605  T
Q  417 attttaacagttcgatctattt 438  Q
    |||| ||| ||| |||| ||||    
T  1794606 atttaaaccgtttgatcaattt 1794627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 222 - 333
Target Start/End: Original strand, 24426337 - 24426448
Alignment:
Q  222 ggcttatttgatcgaatggtccctcaaataatttcaagttttcattttggtcccacaattaataaaacgtatcttttggtccctcacttttttctccgtt 321  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||| |||||||    
T  24426337 ggcttatttgatccaatggtccctcaaataatttcaagttttcattttggtctcacaattaataaaacgtaccttttggtccctcactttttcctccgtt 24426436  T
Q  322 tgccaaataaat 333  Q
    ||||||| ||||    
T  24426437 tgccaaaaaaat 24426448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 91; E-Value: 8e-44
Query Start/End: Original strand, 225 - 420
Target Start/End: Complemental strand, 27851047 - 27850857
Alignment:
Q  225 ttatttgatcgaatggtccctcaaataatttcaagttttcattttggtcccacaattaataaaacgtatcttttggtccctcacttttttctccgtttgc 324  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||| ||||||        
T  27851047 ttatttgatccaatggtccctcaaataatttcaagttttcattttggtcccacaattaataaaacgtatattttggtccctcaatttttcctccgt---- 27850952  T
Q  325 caaataaatcccgaactgttaactttaactccaa---atgtctatggtagaccaaccttaaaagtggtccatcgtagaccttattaattttattaattt 420  Q
       ||||||||| ||| ||||| ||||||  |||   ||||||||||| |||||||||||||||||||||| | |||| | |||||||| | |||||||    
T  27850951 ---ataaatccc-aacagttaagtttaacctcaaatgatgtctatggtggaccaaccttaaaagtggtccaccatagatcctattaattattttaattt 27850857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 91; E-Value: 8e-44
Query Start/End: Original strand, 221 - 420
Target Start/End: Original strand, 52239874 - 52240074
Alignment:
Q  221 tggcttatttgatcgaatggtccctcaaataatttcaagttttcattttggtcccacaattaataaaacgtatcttttggtccctcacttttttctccgt 320  Q
    |||||||||||||| ||||||||||||||||||||||| |||| |||||| |||||||||||||||||||||  ||||||| | |||  |||||||||||    
T  52239874 tggcttatttgatctaatggtccctcaaataatttcaaatttttattttgatcccacaattaataaaacgtacgttttggttcttcaggtttttctccgt 52239973  T
Q  321 ttgccaaataaatcccgaactgttaactttaactccaa--atgtctatggtagaccaaccttaaaagtggtccatcgtagaccttattaattttattaat 418  Q
    ||||||||||||| || ||  |||||||||||| | ||  ||||||||||| |||||||||||| ||||||||| | |||| | ||||||| || |||||    
T  52239974 ttgccaaataaattcc-aagggttaactttaacccaaatgatgtctatggtggaccaaccttaagagtggtccaccatagatcctattaatatttttaat 52240072  T
Q  419 tt 420  Q
    ||    
T  52240073 tt 52240074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 222 - 334
Target Start/End: Original strand, 37882832 - 37882944
Alignment:
Q  222 ggcttatttgatcgaatggtccctcaaataatttcaagttttcattttggtcccacaattaataaaacgtatcttttggtccctcacttttttctccgtt 321  Q
    ||||||||||||  |||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||| |||| |||||||    
T  37882832 ggcttatttgatttaatggtccctcaaataatttcaagttttcattttagtcccacaattaataaaacgtaccttttggtccctcaccttttcctccgtt 37882931  T
Q  322 tgccaaataaatc 334  Q
    |||||||||||||    
T  37882932 tgccaaataaatc 37882944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 259 - 441
Target Start/End: Complemental strand, 7708869 - 7708688
Alignment:
Q  259 gttttcattttggtcccacaattaataaaacgtatc-ttttggtccctcacttttttctccgtttgccaaataaatcccgaactgttaactttaactcca 357  Q
    |||||||||||||| | ||||||||||||| ||  | |||| ||||||||| |||||||| |||||||||||||||||| || ||||||||||||||| |    
T  7708869 gttttcattttggttctacaattaataaaa-gtggcgttttagtccctcacctttttctctgtttgccaaataaatccc-aagtgttaactttaactcta 7708772  T
Q  358 aatgtctatggtagaccaaccttaaaagtggtccatcgtagaccttattaattttattaattttaacagttcgatctatttatc 441  Q
    ||| |||||||| ||||||||||||||||||| |||| ||||||||||||||||| |||||| ||||  | |||||||||||||    
T  7708771 aatatctatggtggaccaaccttaaaagtggtacatcatagaccttattaattttgttaattctaaccatccgatctatttatc 7708688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 86; E-Value: 8e-41
Query Start/End: Original strand, 220 - 420
Target Start/End: Complemental strand, 44503798 - 44503599
Alignment:
Q  220 ttggcttatttgatcgaatggtccctcaaataatttcaagttttcattttggtcccacaattaataaaacgtatcttttggtccctcacttttttctccg 319  Q
    ||||||||||||||  ||| |||||||||||||||||||||||| ||||||||| |||||||||| |||||||  ||||||||||||||||||| ||| |    
T  44503798 ttggcttatttgattcaatagtccctcaaataatttcaagtttttattttggtctcacaattaat-aaacgtacattttggtccctcactttttcctctg 44503700  T
Q  320 tttgccaaataaatcccgaactgttaac-tttaactccaaatgtctatggtagaccaaccttaaaagtggtccatcgtagaccttattaattttattaat 418  Q
    |||||||||||||||||| || |||||| |||||| | |||||||||||||  |||||| ||  |  ||||||| ||||||||||| ||||||  |||||    
T  44503699 tttgccaaataaatcccg-accgttaacttttaaccctaaatgtctatggtgaaccaacattgtagatggtccaccgtagaccttaataatttgcttaat 44503601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 221 - 369
Target Start/End: Original strand, 390214 - 390361
Alignment:
Q  221 tggcttatttgatcgaatggtccctcaaataatttcaagttttcattttggtcccacaattaataaaacgtatcttttggtccctcacttttttctccgt 320  Q
    |||||||||||||  | |||||||  ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| || || ||||||    
T  390214 tggcttatttgattcattggtcccctaaataatttcaagttttcattttggtcccacaattaataaaacgtatattttggtccctcatttcttcctccgt 390313  T
Q  321 ttgccaaataaatcccgaactgttaactttaactccaaatgtctatggt 369  Q
    ||||||||||||||| | |||||||| ||||||  ||||||||| ||||    
T  390314 ttgccaaataaatcctg-actgttaagtttaacctcaaatgtctgtggt 390361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 222 - 420
Target Start/End: Complemental strand, 2312600 - 2312400
Alignment:
Q  222 ggcttatttgatcgaatggtccctcaaataatttcaagttttcattttggtcccacaattaataaaacgtatcttttggtccctcacttttttctccgtt 321  Q
    ||||||||||||| | |||||||| | |||||||||||||| |||||| ||||||||||||||||||||||  |||  |||||||||||||| |||||||    
T  2312600 ggcttatttgatccattggtcccttagataatttcaagtttccattttagtcccacaattaataaaacgtacgtttaagtccctcactttttcctccgtt 2312501  T
Q  322 tgccaaataaatcccgaactgttaactttaactccaa---atgtctatggtagaccaaccttaaaagtggtccatcgtagaccttattaattttattaat 418  Q
    |||||||||||||  | || ||||| |||||| ||||   ||||||||||| |||||| ||||||||||||||| | |||| | |||||||| | |||||    
T  2312500 tgccaaataaatcatg-accgttaagtttaaccccaaatgatgtctatggtggaccaatcttaaaagtggtccaccatagatcctattaattattttaat 2312402  T
Q  419 tt 420  Q
    ||    
T  2312401 tt 2312400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 222 - 420
Target Start/End: Original strand, 11968509 - 11968708
Alignment:
Q  222 ggcttatttgatcgaatggtccctcaaataatttcaagttttcattttggtcccacaattaataaaacgtatcttttggtccctcacttttttctccgtt 321  Q
    |||||||||||||  ||||| ||||||||||||||||||||||||||||||| ||||||||||||||| ||  |||||||||||||  |||| |||||||    
T  11968509 ggcttatttgatcttatggttcctcaaataatttcaagttttcattttggtctcacaattaataaaacatactttttggtccctcagattttgctccgtt 11968608  T
Q  322 tgccaaataaatcccgaactgttaactttaactccaa--atgtctatggtagaccaaccttaaaagtggtccatcgtagaccttattaattttattaatt 419  Q
    ||  |||||||| |||  |||| |||||||||||  |  ||||||||| | |||||||||||| ||||||||||| |||| | |||||||| | ||||||    
T  11968609 tgtaaaataaattccg-gctgtcaactttaactcagattatgtctatgatggaccaaccttaagagtggtccatcatagatcctattaattattttaatt 11968707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 218 - 369
Target Start/End: Complemental strand, 37884399 - 37884249
Alignment:
Q  218 ttttggcttatttgatcgaatggtccctcaaataatttcaagttttcattttggtcccacaattaataaaacgtatcttttggtccctcacttttttctc 317  Q
    ||||||||||||||||  |||||||||||||||||||| || |||||||||| |||||| ||||||||||| ||| |||||||||| | ||||||| |||    
T  37884399 ttttggcttatttgattcaatggtccctcaaataattttaaattttcatttttgtcccataattaataaaatgtaccttttggtcctttactttttcctc 37884300  T
Q  318 cgtttgccaaataaatcccgaactgttaactttaactccaaatgtctatggt 369  Q
    |||||||||||||||||| | |||||||| |||||| |||||| | ||||||    
T  37884299 cgtttgccaaataaatccag-actgttaagtttaaccccaaatatatatggt 37884249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 241 - 439
Target Start/End: Complemental strand, 53435852 - 53435654
Alignment:
Q  241 tccctcaaataatttcaagttttcattttggtcccacaattaataaaacgtatcttttggtccctcacttttttctccgtttgccaaataaatcccgaac 340  Q
    ||||| || ||||||||||||||||||||||||||| || |||||||||  || |||||| ||||||  |||  ||||||| | |||||||||||   ||    
T  53435852 tcccttaattaatttcaagttttcattttggtcccataagtaataaaactcatgttttggcccctcaagtttacctccgttggtcaaataaatccttgac 53435753  T
Q  341 tgttaactttaactccaaatgtctatggtagaccaaccttaaaagtggtccatcgtagaccttattaattttattaattttaacagttcgatctattta 439  Q
     ||||| |||||||  |||||||||||||||||||||||||| ||||||||| ||||||| | ||||||||| | ||||||||| ||| ||||| ||||    
T  53435752 ggttaagtttaactttaaatgtctatggtagaccaaccttaagagtggtccaccgtagacttcattaattttttaaattttaaccgtttgatcttttta 53435654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 222 - 367
Target Start/End: Original strand, 2310921 - 2311065
Alignment:
Q  222 ggcttatttgatcgaatggtccctcaaataatttcaagttttcattttggtcccacaattaataaaacgtatcttttggtccctcacttttttctccgtt 321  Q
    ||||||||||||| ||||||||   || |||||||||||||||||||||||||||||||||||||||||||  |||||||||||||  |||| ||||| |    
T  2310921 ggcttatttgatccaatggtcctctaattaatttcaagttttcattttggtcccacaattaataaaacgtacgttttggtccctcagattttcctccgat 2311020  T
Q  322 tgccaaataaatcccgaactgttaactttaactccaaatgtctatg 367  Q
    |||||||||||| || ||| |||||||||||||  |||||||||||    
T  2311021 tgccaaataaat-cctaacagttaactttaactttaaatgtctatg 2311065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 224 - 420
Target Start/End: Complemental strand, 42810319 - 42810123
Alignment:
Q  224 cttatttgatcgaatggtccctcaaataatttcaagttttcattttggtcccacaattaataaaacgtatcttttggtccctcacttttttctccgtttg 323  Q
    ||||||||||| ||| |||||| |||||||||||| |||||||||||||||||||||||||||||||||  |||  ||||||||| |||| |||||||||    
T  42810319 cttatttgatccaatagtcccttaaataatttcaacttttcattttggtcccacaattaataaaacgtacttttaagtccctcacattttcctccgtttg 42810220  T
Q  324 ccaaataaatcccgaactgttaactttaa-ctccaaatgtctatggtagaccaaccttaaaagtggtccatcgtagaccttattaattttattaattt 420  Q
    |||||||||| ||    |||||| ||||| | ||| |||||||||||  ||||| ||||| ||| ||||| | ||||||||||||| ||| |||||||    
T  42810219 ccaaataaat-ccttggtgttaagtttaacccccagatgtctatggtgaaccaatcttaagagtagtccaccatagaccttattaaattttttaattt 42810123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 219 - 334
Target Start/End: Original strand, 44501513 - 44501628
Alignment:
Q  219 tttggcttatttgatcgaatggtccctcaaataatttcaagttttcattttggtcccacaattaataaaacgtatcttttggtccctcacttttttctcc 318  Q
    |||||||||||||| | | |||||||||||||||||||||||||||||| |||||||| |||||||||||||||  |||  ||||||||||||||||||     
T  44501513 tttggcttatttgaaccattggtccctcaaataatttcaagttttcattctggtcccataattaataaaacgtacgtttaagtccctcacttttttctct 44501612  T
Q  319 gtttgccaaataaatc 334  Q
    ||||||||||||||||    
T  44501613 gtttgccaaataaatc 44501628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 222 - 336
Target Start/End: Complemental strand, 1831381 - 1831267
Alignment:
Q  222 ggcttatttgatcgaatggtccctcaaataatttcaagttttcattttggtcccacaattaataaaacgtatcttttggtccctcacttttttctccgtt 321  Q
    ||||||||||||| ||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||  ||||||||||||| ||||| |||| ||    
T  1831381 ggcttatttgatccaatggtccctcaattaatttcaagttttcattttagtcccacaattaataaaacgtacattttggtccctcattttttcctccatt 1831282  T
Q  322 tgccaaataaatccc 336  Q
    |  ||||||||||||    
T  1831281 tttcaaataaatccc 1831267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 224 - 412
Target Start/End: Original strand, 27847678 - 27847865
Alignment:
Q  224 cttatttgatcgaatggtccctcaaataatttcaagttttcattttggtcccacaattaataaaacgtatcttttggtccctcacttttttctccgtttg 323  Q
    ||||||||||| |||  | ||||||||||||||||||||| |||||||||||||||||||||||| |||| ||| ||||||| | |||||  ||||||||    
T  27847678 cttatttgatctaataattcctcaaataatttcaagtttttattttggtcccacaattaataaaatgtatttttcggtcccttaatttttcttccgtttg 27847777  T
Q  324 ccaaataaatcccgaactgttaactttaactccaaatgtctatggtagaccaaccttaaaagtggtccatcgtagaccttattaatttt 412  Q
    |||||||||||| | || ||||| |||||| |||||||| |||||| | ||||  ||| |  | ||||| | |||||||||||||||||    
T  27847778 ccaaataaatccag-acggttaagtttaaccccaaatgtatatggtgggccaagattatagatagtccaccatagaccttattaatttt 27847865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 221 - 336
Target Start/End: Complemental strand, 1190311 - 1190196
Alignment:
Q  221 tggcttatttgatcgaatggtccctcaaataatttcaagttttcattttggtcccacaattaataaaacgtatcttttggtccctcacttttttctccgt 320  Q
    |||||||||||| | | |||||||||||||||||| |||||||||||||||||||| |||||||||||||||  |||  || ||||||||||||||| ||    
T  1190311 tggcttatttgaaccattggtccctcaaataattttaagttttcattttggtcccataattaataaaacgtacgtttaagtacctcacttttttctctgt 1190212  T
Q  321 ttgccaaataaatccc 336  Q
    ||||||||||||||||    
T  1190211 ttgccaaataaatccc 1190196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 222 - 383
Target Start/End: Complemental strand, 1588207 - 1588044
Alignment:
Q  222 ggcttatttgatcgaatggtccctcaaataatttcaagttttcattttggtcccacaattaataaaacgtatcttttggtccctcacttttttctccgtt 321  Q
    |||||||||||||   |||||||||||||||||| ||||||||||||| |||||||||||||||||| |||  |||   ||||||||||||| |||||||    
T  1588207 ggcttatttgatcttttggtccctcaaataattttaagttttcattttagtcccacaattaataaaatgtacgtttaaatccctcactttttcctccgtt 1588108  T
Q  322 tgccaaataaatcccgaactgttaactttaactccaa---atgtctatggtagaccaaccttaaa 383  Q
    | ||||||||||   | |||||||| |||||| ||||   |||||||||||||||||||||||||    
T  1588107 taccaaataaattatg-actgttaagtttaaccccaaatgatgtctatggtagaccaaccttaaa 1588044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 357 - 459
Target Start/End: Original strand, 2311086 - 2311188
Alignment:
Q  357 aaatgtctatggtagaccaaccttaaaagtggtccatcgtagaccttattaattttattaattttaacagttcgatctatttatcataataggaccgtta 456  Q
    ||||||||||||| |||||| ||||||||||||| |||||||||||||||||| || |||||||||||  ||||||||||||||||||| ||||||||||    
T  2311086 aaatgtctatggtggaccaatcttaaaagtggtctatcgtagaccttattaatattgttaattttaaccattcgatctatttatcataaaaggaccgtta 2311185  T
Q  457 gat 459  Q
    |||    
T  2311186 gat 2311188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 222 - 384
Target Start/End: Complemental strand, 4871482 - 4871320
Alignment:
Q  222 ggcttatttgatcgaatggtccctcaaataatttcaagttttcattttggtcccacaattaataaaacgtatcttttggtccctcacttttttctccgtt 321  Q
    ||||||||||||| | |||||||  ||||||||||| |||||||||||||| | |||||||||||||||||| |||  ||||| ||| ||||||||||||    
T  4871482 ggcttatttgatccattggtccccaaaataatttcatgttttcattttggttctacaattaataaaacgtatgtttaagtcccccacgtttttctccgtt 4871383  T
Q  322 tgccaaataaatcccgaactgttaactttaactccaaatgtctatggtagaccaaccttaaaa 384  Q
    || ||||||||||||  | ||||||||||||  |||||||| |||  | ||||||| ||||||    
T  4871382 tgtcaaataaatccctgaatgttaactttaatcccaaatgtttatcatggaccaactttaaaa 4871320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 250 - 422
Target Start/End: Complemental strand, 10168873 - 10168700
Alignment:
Q  250 taatttcaagttttcattttggtcccacaattaataaaacgtatcttttggtccctcacttttttctccgtttgccaaataaatcccgaactgttaactt 349  Q
    |||||||| ||||||||||||||||||||||||||||||      |||| ||||||||| |||| |||||||||||||||||||||   || ||||||||    
T  10168873 taatttcatgttttcattttggtcccacaattaataaaaatggcgttttagtccctcacattttcctccgtttgccaaataaatccatgacagttaactt 10168774  T
Q  350 taactcc-aaatgtctatggtagaccaaccttaaaagtggtccatcgtagaccttattaattttattaatttta 422  Q
    |||| || ||||||||||||| ||||||| ||| |  ||||||| |||| |||||||||||||  |||||||||    
T  10168773 taacccccaaatgtctatggtggaccaacattatagatggtccaccgtacaccttattaatttatttaatttta 10168700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 241 - 434
Target Start/End: Original strand, 53432079 - 53432272
Alignment:
Q  241 tccctcaaataatttcaagttttcattttggtcccacaattaataaaacgtatcttttggtccctcacttttttctccgtttgccaaataaatcccgaac 340  Q
    ||||| || ||||||||||||||||||||||||||| || ||||||||| ||| |||||||||||||  |||  || |||| | ||||||||||||  ||    
T  53432079 tcccttaattaatttcaagttttcattttggtcccataagtaataaaacttatgttttggtccctcaagtttgccttcgttggtcaaataaatccctgac 53432178  T
Q  341 tgttaactttaactccaaatgtctatggtagaccaaccttaaaagtggtccatcgtagaccttattaattttattaattttaacagttcgatct 434  Q
     ||||| |||||| |||||||||||||||  |||||| |||| |||||  || | || |||||||||||||| | ||||||||| ||| |||||    
T  53432179 ggttaagtttaaccccaaatgtctatggtgaaccaactttaagagtggctcaccatacaccttattaattttttcaattttaaccgtttgatct 53432272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 215 - 424
Target Start/End: Complemental strand, 49344135 - 49343925
Alignment:
Q  215 ttattttggcttatttgatcgaatggtccctcaaataatttcaagttttcattttggtcccacaattaataaaacgtatcttttggtccc-tcacttttt 313  Q
    |||||| ||||||||||||| ||||||||   ||||||||| ||| ||| |||||||||||||||||||||||||||   |||  ||||| |||||||||    
T  49344135 ttatttaggcttatttgatccaatggtcctctaaataattttaagcttttattttggtcccacaattaataaaacgtgggtttaagtcccttcacttttt 49344036  T
Q  314 tctccgtttgccaaataaatcccgaactgttaactttaactccaaatgtctatggtagaccaaccttaaaagtggtccatcgtagaccttattaatttta 413  Q
     ||||||||||||||||||||      |||||| |||||| | || | |||||||| || ||| ||||||||| ||||| | ||||| | |||||||||     
T  49344035 cctccgtttgccaaataaatcattcgatgttaagtttaaccctaagtatctatggtggatcaatcttaaaagttgtccaccatagacttcattaattttt 49343936  T
Q  414 ttaattttaac 424  Q
    | |||||||||    
T  49343935 taaattttaac 49343925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 218 - 424
Target Start/End: Complemental strand, 53205605 - 53205399
Alignment:
Q  218 ttttggcttatttgatcgaatggtccctcaaataatttcaagttttcattttggtcccacaattaataaaacgtatcttttggtccctcacttttttctc 317  Q
    ||||||||||||||||  | | ||||| ||||||||||||  |||||||||| ||||||||||||| ||||      |||| |||||||||||||| |||    
T  53205605 ttttggcttatttgattcattagtcccccaaataatttcagattttcattttcgtcccacaattaaaaaaataggcgttttagtccctcactttttcctc 53205506  T
Q  318 cgtttgccaaataaatcccgaactgttaactttaactccaaatgtctatggtagaccaaccttaaaagtggtccatcgtagaccttattaattttattaa 417  Q
    ||||||||||||||||||     ||||||||||||   |||||||||||||| || |||| ||| |  ||||||  ||||||| |||| |||||| ||||    
T  53205505 cgtttgccaaataaatccatgggtgttaactttaatctcaaatgtctatggtggatcaacattatagatggtccgccgtagactttatcaattttgttaa 53205406  T
Q  418 ttttaac 424  Q
    |||||||    
T  53205405 ttttaac 53205399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 250 - 420
Target Start/End: Original strand, 7707614 - 7707786
Alignment:
Q  250 taatttcaagttttcattttggtcccacaattaataaaacgtatcttttggtccctcacttttttctccgtttgccaaataaatcccgaactgttaactt 349  Q
    |||||||| ||||||||||||||||||||||||||||||   |  |||| |||| |||| |||| ||| ||||||||||||||||| | || |||| |||    
T  7707614 taatttcatgttttcattttggtcccacaattaataaaaatgacgttttagtccatcacattttcctctgtttgccaaataaatcctg-acggttagctt 7707712  T
Q  350 taactccaa---atgtctatggtagaccaaccttaaaagtggtccatcgtagaccttattaattttattaattt 420  Q
    |||| ||||   |||||| ||||||||||||||||| ||||||||| | |||| | |||||||| | |||||||    
T  7707713 taacaccaaatgatgtctttggtagaccaaccttaagagtggtccaccatagatcctattaattattttaattt 7707786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 224 - 335
Target Start/End: Original strand, 31965835 - 31965946
Alignment:
Q  224 cttatttgatcgaatggtccctcaaataatttcaagttttcattttggtcccacaattaataaaacgtatcttttggtccctcacttttttctccgtttg 323  Q
    ||||||||||| |||| ||||  || |||||||||||||| ||| |||||| |||||||| |||| |||  ||||||||||||||||||| |||||||||    
T  31965835 cttatttgatctaatgatcccctaattaatttcaagtttttattctggtcctacaattaagaaaatgtacattttggtccctcactttttcctccgtttg 31965934  T
Q  324 ccaaataaatcc 335  Q
    ||||||||||||    
T  31965935 ccaaataaatcc 31965946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 247 - 366
Target Start/End: Complemental strand, 54485638 - 54485519
Alignment:
Q  247 aaataatttcaagttttcattttggtcccacaattaataaaacgtatcttttggtccctcacttttttctccgtttgccaaataaatcccgaactgttaa 346  Q
    |||||||||||||||||||||||| ||||| |||||||||||| |   ||||| |||||||  ||||  ||||||||||||||||||| | |||| ||||    
T  54485638 aaataatttcaagttttcattttgatcccataattaataaaacattcgttttgatccctcaagttttcatccgtttgccaaataaatcacaaactattaa 54485539  T
Q  347 ctttaactccaaatgtctat 366  Q
    ||||||||| ||||||||||    
T  54485538 ctttaactctaaatgtctat 54485519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 216 - 434
Target Start/End: Original strand, 13165488 - 13165705
Alignment:
Q  216 tattttggcttatttgatcgaatggtccctcaaataatttcaagttttcattttggtcccacaattaataaaacgtatcttttggtccctcacttttttc 315  Q
    |||||||||||||| |||||  |||||| | |  |||||||| |||||||||||||||||  |||||||||||      |||| |||| |||  |||| |    
T  13165488 tattttggcttattagatcgtttggtccattatttaatttcatgttttcattttggtccct-aattaataaaaatggcgttttcgtccttcatcttttcc 13165586  T
Q  316 tccgtttgccaaataaatcccgaactgttaactttaactccaaatgtctatggtagaccaaccttaaaagtggtccatcgtagaccttattaattttatt 415  Q
    |||||||| |||||||||||   |||||||| ||||||| ||||| |||||||| |||||||||||| ||||||||| | ||||| | ||||||| | ||    
T  13165587 tccgtttgtcaaataaatccttgactgttaagtttaacttcaaatttctatggtggaccaaccttaagagtggtccaccatagacttcattaattatttt 13165686  T
Q  416 aattttaacagttcgatct 434  Q
    ||||| ||| ||| |||||    
T  13165687 aatttaaaccgtttgatct 13165705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 222 - 335
Target Start/End: Complemental strand, 31968510 - 31968397
Alignment:
Q  222 ggcttatttgatcgaatggtccctcaaataatttcaagttttcattttggtcccacaattaataaaacgtatcttttggtccctcacttttttctccgtt 321  Q
    |||||||| |||| || ||||||  || |||||| || ||||||||||||||| |||||||||||||||||  ||||||||| ||||||||| ||| |||    
T  31968510 ggcttattagatccaacggtcccctaattaattttaatttttcattttggtcctacaattaataaaacgtacgttttggtccttcactttttcctctgtt 31968411  T
Q  322 tgccaaataaatcc 335  Q
    ||||||||||||||    
T  31968410 tgccaaataaatcc 31968397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 250 - 412
Target Start/End: Complemental strand, 13533350 - 13533189
Alignment:
Q  250 taatttcaagttttcattttggtcccacaattaataaaacgtatcttttggtccctcacttttttctccgtttgccaaataaatcccgaactgttaactt 349  Q
    ||||||||||||||||| || || ||| || ||| |||||  || |||||||||||||| ||| |||||||  | ||||||||||| || ||||||| ||    
T  13533350 taatttcaagttttcatcttagttccataactaaaaaaactcatgttttggtccctcacgtttgtctccgtcggtcaaataaatccaga-ctgttaaatt 13533252  T
Q  350 taactccaaatgtctatggtagaccaaccttaaaagtggtccatcgtagaccttattaatttt 412  Q
    ||||| |||||||||||||| ||||||| ||| |  | ||||| | |||||||||||||||||    
T  13533251 taacttcaaatgtctatggtggaccaacattatagatagtccaccatagaccttattaatttt 13533189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 225 - 331
Target Start/End: Complemental strand, 42872414 - 42872308
Alignment:
Q  225 ttatttgatcgaatggtccctcaaataatttcaagttttcattttggtcccacaattaataaaacgtatcttttggtccctcacttttttctccgtttgc 324  Q
    |||||||||  |||||||||  || ||||| | | ||||||||||||||||| ||||||||||| |||  ||||||||||||||||||| ||||||||||    
T  42872414 ttatttgattcaatggtcccctaattaattaccatttttcattttggtcccataattaataaaatgtacgttttggtccctcactttttcctccgtttgc 42872315  T
Q  325 caaataa 331  Q
    |||||||    
T  42872314 caaataa 42872308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 222 - 420
Target Start/End: Complemental strand, 15450193 - 15449994
Alignment:
Q  222 ggcttatttgatcgaatggtccctcaaataatttcaagttttcattttggtcccacaattaataaaacgtatcttttggtccctcacttttttctccgtt 321  Q
    ||||||||||||  | |||||||| ||||||||||| ||||||||| || ||||  | |||||||||||||  |||  ||| || || |||| |||||||    
T  15450193 ggcttatttgattcattggtcccttaaataatttcaggttttcattatgatcccttagttaataaaacgtacgtttaagtcgcttaccttttcctccgtt 15450094  T
Q  322 tgccaaataaatcccgaactgttaactttaactccaaatgt---ctatggtagaccaaccttaaaagtggtccatcgtagaccttattaattttattaat 418  Q
    |||||||||||||    || ||||| |||||||||||||||   |||| || |||||||||||| ||||||||| | |||| | ||||||| || |||||    
T  15450093 tgccaaataaatctt--acggttaagtttaactccaaatgttgtctatcgtggaccaaccttaagagtggtccaccatagatcctattaatatttttaat 15449996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 248 - 392
Target Start/End: Original strand, 49342643 - 49342787
Alignment:
Q  248 aataatttcaagttttcattttggtcccacaattaataaaacgtatcttttggtccctcacttttttctccgtttgccaaataaatcccgaactgttaac 347  Q
    |||||||| |||||||||||||| ||||||||||||||||| |||  |||  |||||||||||||| |||| ||||  ||||||||       ||||||     
T  49342643 aataattttaagttttcattttgatcccacaattaataaaatgtacgtttaagtccctcactttttcctccatttgttaaataaattattcggtgttaag 49342742  T
Q  348 tttaactccaaatgtctatggtagaccaaccttaaaagtggtcca 392  Q
    |||||| ||||| |||||| || ||||||||||||||||||||||    
T  49342743 tttaaccccaaacgtctatagtggaccaaccttaaaagtggtcca 49342787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 250 - 392
Target Start/End: Original strand, 33231415 - 33231558
Alignment:
Q  250 taatttcaagttttcattttggtcccacaattaataaaacgtatcttttggtccctcacttttttctccgtttgccaaataaatcccgaactgttaactt 349  Q
    |||||||| ||||||||||| ||||||||||||||||||    | |||| ||||||||  |||||| ||||||||||||||||| |  |  |||||| ||    
T  33231415 taatttcatgttttcattttagtcccacaattaataaaaatggtgttttagtccctcatctttttcaccgtttgccaaataaattcatacttgttaagtt 33231514  T
Q  350 taactc-caaatgtctatggtagaccaaccttaaaagtggtcca 392  Q
    |||| | |||||||||||||| ||| ||||||| ||||||||||    
T  33231515 taaccctcaaatgtctatggtggacaaaccttagaagtggtcca 33231558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 248 - 366
Target Start/End: Original strand, 54484336 - 54484455
Alignment:
Q  248 aataatttc-aagttttcattttggtcccacaattaataaaacgtatcttttggtccctcacttttttctccgtttgccaaataaatcccgaactgttaa 346  Q
    ||||||||| || |||| |||||||| ||| ||||||||||||||   ||||||||||| |  |||| ||| |||||||||||||||| | |||||||||    
T  54484336 aataatttccaattttttattttggtaccataattaataaaacgttcgttttggtccctaaaattttcctctgtttgccaaataaatctcaaactgttaa 54484435  T
Q  347 ctttaactccaaatgtctat 366  Q
    ||||||||| ||||||||||    
T  54484436 ctttaactctaaatgtctat 54484455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 249 - 377
Target Start/End: Complemental strand, 11438659 - 11438531
Alignment:
Q  249 ataatttcaagttttcattttggtcccacaattaataaaacgtatcttttggtccctcacttttttctccgtttgccaaataaatcccgaactgttaact 348  Q
    ||||||| ||||||| ||||||||| || ||||||||||||     ||||||||||||||||||| |||| ||||| ||||||||| |  ||| |||| |    
T  11438659 ataatttgaagtttttattttggtctcataattaataaaacactcgttttggtccctcactttttcctccatttgctaaataaatctctgacttttaagt 11438560  T
Q  349 ttaactccaaatgtctatggtagaccaac 377  Q
    ||||| ||||||||||| ||| |||||||    
T  11438559 ttaaccccaaatgtctacggtggaccaac 11438531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 250 - 376
Target Start/End: Complemental strand, 14524941 - 14524815
Alignment:
Q  250 taatttcaagtttt-cattttggtcccacaattaataaaacgtatcttttggtccctcacttttttctccgtttgccaaataaatcccgaactgttaact 348  Q
    |||||||||||||| ||||||| ||||| ||||||||||||  || |||| ||| || ||||||  |||||||||| ||| ||||||| ||||||||| |    
T  14524941 taatttcaagtttttcattttgatcccataattaataaaactcatgttttagtctcttacttttccctccgtttgcaaaa-aaatccctaactgttaagt 14524843  T
Q  349 ttaactccaaatgtctatggtagaccaa 376  Q
    ||||| ||||||||||||| | ||||||    
T  14524842 ttaaccccaaatgtctatgatggaccaa 14524815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 218 - 360
Target Start/End: Complemental strand, 54866752 - 54866612
Alignment:
Q  218 ttttggcttatttgatcgaatggtccctcaaataatttcaagttttcattttggtcccacaattaataaaacgtatcttttggtccctcacttttttctc 317  Q
    |||||||||||| |||||  |||||||| |  ||||||||  ||||||||||||| |||||||||||||||    | |||| |||||| || |||| |||    
T  54866752 ttttggcttattagatcgtttggtcccttatttaatttcatattttcattttggt-ccacaattaataaaaatggtgttttagtcccttacgttttcctc 54866654  T
Q  318 cgtttgccaaataaatcccgaactgttaactttaactccaaat 360  Q
    |||||||||||||||||  | |||||||| |||||||||||||    
T  54866653 cgtttgccaaataaatcatg-actgttaagtttaactccaaat 54866612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 300 - 392
Target Start/End: Complemental strand, 13166809 - 13166717
Alignment:
Q  300 gtccctcacttttttctccgtttgccaaataaatcccgaactgttaactttaactccaaatgtctatggtagaccaaccttaaaagtggtcca 392  Q
    ||||||||||||||  ||||||||||||||||||||   |||||||| ||||||| |||||||||||| | |||||||| ||| |||| ||||    
T  13166809 gtccctcactttttcatccgtttgccaaataaatccttgactgttaagtttaacttcaaatgtctatgatggaccaaccgtaagagtgatcca 13166717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 250 - 392
Target Start/End: Original strand, 50546932 - 50547075
Alignment:
Q  250 taatttcaagttttcattttggtcccacaattaataaaacgtatcttttggtccctcacttttttctccgtttgccaaataaatcccgaactgttaactt 349  Q
    |||||||| || |||||||| ||||||||||||||||||      |||| ||||||||  |||| | |||||||||||||||||||| | ||||||| ||    
T  50546932 taatttcatgtcttcattttagtcccacaattaataaaaatggcgttttagtccctcatcttttccaccgtttgccaaataaatccctacctgttaagtt 50547031  T
Q  350 taactc-caaatgtctatggtagaccaaccttaaaagtggtcca 392  Q
    |||| | |||||||||||||  ||  ||||||| ||||||||||    
T  50547032 taaccctcaaatgtctatggcggataaaccttagaagtggtcca 50547075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 241 - 336
Target Start/End: Original strand, 53204378 - 53204473
Alignment:
Q  241 tccctcaaataatttcaagttttcattttggtcccacaattaataaaacgtatcttttggtccctcacttttttctccgtttgccaaataaatccc 336  Q
    ||||| ||||||||| | |||||||||||| || |||||||||||||||     |||| || ||||| ||||||||||||||||||||||||||||    
T  53204378 tcccttaaataatttaatgttttcattttgatctcacaattaataaaacaggcgttttagttcctcaattttttctccgtttgccaaataaatccc 53204473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 222 - 336
Target Start/End: Original strand, 10167423 - 10167537
Alignment:
Q  222 ggcttatttgatcgaatggtccctcaaataatttcaagttttcattttggtcccacaattaataaaacgtatcttttggtccctcacttttttctccgtt 321  Q
    |||||||| |||||  |||||||| |  |||||||| |||||||||||||| |||||||||||||||  |   |||| ||||||||  |||| |||||||    
T  10167423 ggcttattagatcgtttggtcccttatttaatttcatgttttcattttggtaccacaattaataaaaattgcattttagtccctcatattttcctccgtt 10167522  T
Q  322 tgccaaataaatccc 336  Q
    || ||||||||||||    
T  10167523 tgtcaaataaatccc 10167537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 250 - 336
Target Start/End: Original strand, 23201872 - 23201958
Alignment:
Q  250 taatttcaagttttcattttggtcccacaattaataaaacgtatcttttggtccctcacttttttctccgtttgccaaataaatccc 336  Q
    |||||||| ||||| |||||||||||||| |||||||||      |||||||||||||| |||| ||||||||||||||||||||||    
T  23201872 taatttcatgtttttattttggtcccacatttaataaaaatggcattttggtccctcaccttttcctccgtttgccaaataaatccc 23201958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 260 - 390
Target Start/End: Original strand, 40723264 - 40723393
Alignment:
Q  260 ttttcattttggtcccacaattaataaaacgtatcttttggtccctcacttttttctccgtttgccaaataaatcccgaactgttaactttaactccaaa 359  Q
    ||||||||||||||||| || |||||||||  || ||||||||||| |  ||| |||||||  | ||||||||| ||  |||||||| ||||||  ||||    
T  40723264 ttttcattttggtcccataactaataaaactcatgttttggtcccttaggtttatctccgtcggtcaaataaat-ccatactgttaagtttaacctcaaa 40723362  T
Q  360 tgtctatggtagaccaaccttaaaagtggtc 390  Q
    ||| |||||| |||||||||||| |||||||    
T  40723363 tgtatatggtggaccaaccttaagagtggtc 40723393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 340 - 420
Target Start/End: Original strand, 56085463 - 56085543
Alignment:
Q  340 ctgttaactttaactccaaatgtctatggtagaccaaccttaaaagtggtccatcgtagaccttattaattttattaattt 420  Q
    |||||||||||||| ||||||||||||||| ||| |||||||| ||||||||| | |||| | |||||||| | |||||||    
T  56085463 ctgttaactttaaccccaaatgtctatggtggactaaccttaagagtggtccaccatagatcctattaattattttaattt 56085543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 222 - 424
Target Start/End: Original strand, 4714017 - 4714220
Alignment:
Q  222 ggcttatttgatcgaatggtccctcaaataatttcaagttttcattttggtcccacaattaataaaacgtatcttttggtccctcacttttttctccgtt 321  Q
    |||||||| |||||  |||||||| |  ||||||||  |||| ||||||||||||||||||||||||      ||||  ||||| || || | |||| ||    
T  4714017 ggcttattagatcgtttggtcccttatttaatttcatatttttattttggtcccacaattaataaaaatggcgttttaatcccttaccttatcctccttt 4714116  T
Q  322 t-gccaaataaatcccgaactgttaactttaactccaaatgtctatggtagaccaaccttaaaagtggtccatcgtagaccttattaattttattaattt 420  Q
    | ||||||||||||    ||| |||| ||||||| |||||||||||||| || ||||||||| ||||||||| | ||||| | |||||| || | |||||    
T  4714117 ttgccaaataaatcatcgactattaagtttaacttcaaatgtctatggtggatcaaccttaagagtggtccaccatagacttcattaatattttaaattt 4714216  T
Q  421 taac 424  Q
    ||||    
T  4714217 taac 4714220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 341 - 420
Target Start/End: Original strand, 22069352 - 22069431
Alignment:
Q  341 tgttaactttaactccaaatgtctatggtagaccaaccttaaaagtggtccatcgtagaccttattaattttattaattt 420  Q
    |||||||||||||| |||||||||||||| ||| ||||||||||||||| || | |||||  ||||||| || |||||||    
T  22069352 tgttaactttaacttcaaatgtctatggtggacgaaccttaaaagtggttcaccatagactctattaatatttttaattt 22069431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 253 - 335
Target Start/End: Complemental strand, 50548310 - 50548228
Alignment:
Q  253 tttcaagttttcattttggtcccacaattaataaaacgtatcttttggtccctcacttttttctccgtttgccaaataaatcc 335  Q
    ||||| |||||||||||||||||||||||||||| |   |  |||| ||||||||| |||| ||| |||||||||||||||||    
T  50548310 tttcatgttttcattttggtcccacaattaataagaataacgttttagtccctcacattttcctctgtttgccaaataaatcc 50548228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 295 - 372
Target Start/End: Complemental strand, 5591495 - 5591418
Alignment:
Q  295 ttttggtccctcacttttttctccgtttgccaaataaatcccgaactgttaactttaactccaaatgtctatggtaga 372  Q
    |||| |||||||||| ||||||| ||||||||||||||||     ||||||| ||||||| |||||||||||||||||    
T  5591495 ttttagtccctcactcttttctctgtttgccaaataaatctttggctgttaaatttaacttcaaatgtctatggtaga 5591418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 295 - 372
Target Start/End: Original strand, 48126875 - 48126952
Alignment:
Q  295 ttttggtccctcacttttttctccgtttgccaaataaatcccgaactgttaactttaactccaaatgtctatggtaga 372  Q
    |||| |||||||||| ||||||| ||||||||||||||||     ||||||| ||||||| |||||||||||||||||    
T  48126875 ttttagtccctcactcttttctctgtttgccaaataaatctttggctgttaaatttaacttcaaatgtctatggtaga 48126952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 250 - 334
Target Start/End: Original strand, 54865131 - 54865214
Alignment:
Q  250 taatttcaagttttcattttggtcccacaattaataaaacgtatcttttggtccctcacttttttctccgtttgccaaataaatc 334  Q
    |||||| | |||||||||||||||||| |||||||||||  | | |||| ||||||||| |||| ||||||||| ||||||||||    
T  54865131 taattttatgttttcattttggtcccataattaataaaa-ttgtgttttagtccctcacattttcctccgtttgtcaaataaatc 54865214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 342 - 420
Target Start/End: Original strand, 4871611 - 4871690
Alignment:
Q  342 gttaactttaactc-caaatgtctatggtagaccaaccttaaaagtggtccatcgtagaccttattaattttattaattt 420  Q
    |||||||||||| | |||||||||||||| ||||||||| || ||||||||| |||||| | |||||||| | |||||||    
T  4871611 gttaactttaaccctcaaatgtctatggtggaccaacctaaagagtggtccaccgtagatcctattaattattttaattt 4871690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 342 - 412
Target Start/End: Complemental strand, 28657116 - 28657046
Alignment:
Q  342 gttaactttaactccaaatgtctatggtagaccaaccttaaaagtggtccatcgtagaccttattaatttt 412  Q
    |||||||||||| ||||||||||  ||| ||||||||||  | ||| |||| |||||||||||||||||||    
T  28657116 gttaactttaaccccaaatgtcttaggtggaccaaccttgtaggtgatccaccgtagaccttattaatttt 28657046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 238 - 303
Target Start/End: Complemental strand, 28591007 - 28590942
Alignment:
Q  238 tggtccctcaaataatttcaagttttcattttggtcccacaattaataaaacgtatcttttggtcc 303  Q
    |||||||| |||||||||| || |||||||||||||||| || |||||||||  || |||||||||    
T  28591007 tggtcccttaaataatttccagctttcattttggtcccataaataataaaactcatgttttggtcc 28590942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 342 - 419
Target Start/End: Original strand, 44498579 - 44498656
Alignment:
Q  342 gttaactttaactccaaatgtctatggtagaccaaccttaaaagtggtccatcgtagaccttattaattttattaatt 419  Q
    |||||||||||||  ||||||||||||| || ||||||||| ||||||||| | |||| | |||||||| | ||||||    
T  44498579 gttaactttaactttaaatgtctatggtggatcaaccttaagagtggtccaccatagatcctattaattattttaatt 44498656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 348 - 424
Target Start/End: Original strand, 56000408 - 56000484
Alignment:
Q  348 tttaactccaaatgtctatggtagaccaaccttaaaagtggtccatcgtagaccttattaattttattaattttaac 424  Q
    |||||| | ||||||||| ||| ||||||| ||| | |||||||| ||||||||||| ||| ||| |||||||||||    
T  56000408 tttaacactaaatgtctaaggtggaccaacattataggtggtccaccgtagaccttactaagttttttaattttaac 56000484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 399 - 445
Target Start/End: Complemental strand, 2974445 - 2974399
Alignment:
Q  399 accttattaattttattaattttaacagttcgatctatttatcataa 445  Q
    |||||||||||||| ||||||||||  ||||||||||||| ||||||    
T  2974445 accttattaatttttttaattttaattgttcgatctatttgtcataa 2974399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 374 - 424
Target Start/End: Original strand, 17494274 - 17494324
Alignment:
Q  374 caaccttaaaagtggtccatcgtagaccttattaattttattaattttaac 424  Q
    |||| |||||||| ||||| | ||||||||||||||||||| |||||||||    
T  17494274 caacgttaaaagtagtccaccatagaccttattaattttatgaattttaac 17494324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 238 - 307
Target Start/End: Complemental strand, 669747 - 669678
Alignment:
Q  238 tggtccctcaaataatttcaagttttcattttggtcccacaattaataaaacgtatcttttggtccctca 307  Q
    ||||||| ||| ||||||  | ||||||||||||||||| ||||||||||||  |  |||||||||||||    
T  669747 tggtcccccaattaattttcaattttcattttggtcccataattaataaaactcacattttggtccctca 669678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 339 - 420
Target Start/End: Original strand, 1519926 - 1520006
Alignment:
Q  339 actgttaactttaactccaaatgtctatggtagaccaaccttaaaagtggtccatcgtagaccttattaattttattaattt 420  Q
    ||||||||||||||| |||||||| ||||||||| | ||||| |||||| |||| | |||| | |||||||| | |||||||    
T  1519926 actgttaactttaaccccaaatgtttatggtagatc-acctttaaagtgatccaccatagatcctattaattattttaattt 1520006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 338 - 410
Target Start/End: Complemental strand, 26496312 - 26496239
Alignment:
Q  338 aactgttaactttaactcc-aaatgtctatggtagaccaaccttaaaagtggtccatcgtagaccttattaatt 410  Q
    |||||||||||||||| || ||||||||||||| |||| || |||||| ||||||| | |||| | ||||||||    
T  26496312 aactgttaactttaacccccaaatgtctatggtggaccgactttaaaaatggtccaccatagatcctattaatt 26496239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 241 - 301
Target Start/End: Original strand, 28589798 - 28589858
Alignment:
Q  241 tccctcaaataatttcaagttttcattttggtcccacaattaataaaacgtatcttttggt 301  Q
    ||||| |||||||||  ||||||||||||||||||| || || |||||| ||| |||||||    
T  28589798 tcccttaaataattttcagttttcattttggtcccataagtattaaaacttatgttttggt 28589858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 236 - 276
Target Start/End: Original strand, 44498472 - 44498512
Alignment:
Q  236 aatggtccctcaaataatttcaagttttcattttggtccca 276  Q
    ||||||||||||| ||||||| ||||||| |||||||||||    
T  44498472 aatggtccctcaattaatttcgagttttcgttttggtccca 44498512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 236 - 276
Target Start/End: Original strand, 49895052 - 49895092
Alignment:
Q  236 aatggtccctcaaataatttcaagttttcattttggtccca 276  Q
    ||||||||||||| ||||| | |||||||||||||||||||    
T  49895052 aatggtccctcaactaattaccagttttcattttggtccca 49895092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 161; Significance: 1e-85; HSPs: 37)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 161; E-Value: 1e-85
Query Start/End: Original strand, 222 - 434
Target Start/End: Complemental strand, 325303 - 325092
Alignment:
Q  222 ggcttatttgatcgaatggtccctcaaataatttcaagttttcattttggtcccacaattaataaaacgtatcttttggtccctcacttttttctccgtt 321  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||  |||| |||||||    
T  325303 ggcttatttgatctaatggtccctcaaataatttcaagttttcattttggtcccacaattaataaaacgtaccttttggtccctcaagttttcctccgtt 325204  T
Q  322 tgccaaataaatcccgaactgttaactttaactccaaatgtctatggtagaccaaccttaaaagtggtccatcgtagaccttattaattttattaatttt 421  Q
    |||||||||||||||| ||||||||||||||||| ||||||||||||| |||||||||||| ||||||||||||||||||||||||||||| ||||||||    
T  325203 tgccaaataaatcccg-actgttaactttaactctaaatgtctatggtggaccaaccttaatagtggtccatcgtagaccttattaattttgttaatttt 325105  T
Q  422 aacagttcgatct 434  Q
    ||| ||| |||||    
T  325104 aaccgtttgatct 325092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 109; E-Value: 2e-54
Query Start/End: Original strand, 225 - 459
Target Start/End: Complemental strand, 39605584 - 39605349
Alignment:
Q  225 ttatttgatcgaatggtccctcaaataatttcaagttttcattttggtcccacaattaataaaacgtatcttttggtccctcacttttttctccgtttgc 324  Q
    |||||||||  ||||||||   || |||||||||||||||||||||||||||||||||||||||| ||  |||||||||||||  |||| ||||||||||    
T  39605584 ttatttgattcaatggtcctctaattaatttcaagttttcattttggtcccacaattaataaaacatacgttttggtccctcagattttcctccgtttgc 39605485  T
Q  325 caaataaatcccgaactgttaactttaactccaaatgtctatggtagaccaacctt-aaaagtggtccatcgtagaccttattaattttattaattttaa 423  Q
    ||||||||||| | || |||||||| ||||  |||||| |||||| |||||| ||| |||||||||| || |||||||||||||||||| |||||||||     
T  39605484 caaataaatcctg-acggttaacttcaactttaaatgtatatggtggaccaatcttaaaaagtggtctatggtagaccttattaattttcttaattttat 39605386  T
Q  424 cagttcgatctatttatcataata-ggaccgttagat 459  Q
    | |||||||||||||||||||| | ||||||||||||    
T  39605385 ccgttcgatctatttatcataaaagggaccgttagat 39605349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 220 - 441
Target Start/End: Complemental strand, 30912282 - 30912062
Alignment:
Q  220 ttggcttatttgatcgaatggtccctcaaataatttcaagttttcattttggtcccacaattaataaaacgtatc-ttttggtccctcacttttttctcc 318  Q
    |||||||||| |||||  | |||||| |  |||||||| |||||||||||||||||||||||||||||| ||  | |||| ||||||||| |||||||||    
T  30912282 ttggcttattagatcgtttagtcccttatttaatttcatgttttcattttggtcccacaattaataaaa-gtggcgttttagtccctcacctttttctcc 30912184  T
Q  319 gtttgccaaataaatcccgaactgttaactttaactccaaatgtctatggtagaccaaccttaaaagtggtccatcgtagaccttattaattttattaat 418  Q
    |||||||||||||||||| || |||||||||||||||||||| |||||||| ||||||||||||||||||| |||| ||||||||||||||||| |||||    
T  30912183 gtttgccaaataaatccc-aagtgttaactttaactccaaatatctatggtggaccaaccttaaaagtggtacatcatagaccttattaattttgttaat 30912085  T
Q  419 tttaacagttcgatctatttatc 441  Q
    | |||   | |||||||||||||    
T  30912084 tctaatcatccgatctatttatc 30912062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 98; E-Value: 6e-48
Query Start/End: Original strand, 224 - 420
Target Start/End: Original strand, 39603853 - 39604051
Alignment:
Q  224 cttatttgatcgaatggtccctcaaataatttcaagttttcattttggtcccacaattaataaaacgtatcttttggtccctcacttttttctccgtttg 323  Q
    ||||||||||| | || |||||||||||||||||||||||||||||| |||||||||||||||||||||  |||||||||||||  |||| |||||||||    
T  39603853 cttatttgatccattgatccctcaaataatttcaagttttcattttgatcccacaattaataaaacgtacgttttggtccctcaaattttcctccgtttg 39603952  T
Q  324 ccaaataaatcccgaactgttaactttaactccaa---atgtctatggtagaccaaccttaaaagtggtccatcgtagaccttattaattttattaattt 420  Q
    |||||||||||  | |||||||| |||||| ||||   ||||||||||||||||||||||||||||| |||| | |||| | |||||||| | |||||||    
T  39603953 ccaaataaatcatg-actgttaagtttaaccccaaatgatgtctatggtagaccaaccttaaaagtgatccaccatagatcctattaattattttaattt 39604051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 96; E-Value: 9e-47
Query Start/End: Original strand, 222 - 392
Target Start/End: Original strand, 22047730 - 22047902
Alignment:
Q  222 ggcttatttgatcgaatggtccctcaaataatttcaagttttcattttggtcccacaattaataaaacgtatcttttggtccctcacttttttctccgtt 321  Q
    ||||||||||||| |||||||||| || |||||||||||||||||||||||||||||||||||||||||||  ||||||||||||| ||||| |||||||    
T  22047730 ggcttatttgatccaatggtcccttaattaatttcaagttttcattttggtcccacaattaataaaacgtacgttttggtccctcattttttcctccgtt 22047829  T
Q  322 tgccaaataaatcccgaactgttaactttaactccaa---atgtctatggtagaccaaccttaaaagtggtcca 392  Q
    |||||||||||||| |  ||||||| |||||||| ||   ||||||||||| || ||||||||| |||||||||    
T  22047830 tgccaaataaatcctg-gctgttaagtttaactctaaatgatgtctatggtggatcaaccttaagagtggtcca 22047902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 220 - 413
Target Start/End: Original strand, 30857796 - 30857988
Alignment:
Q  220 ttggcttatttgatcgaatggtccctcaaataatttcaagttttcattttggtcccacaattaataaaacgtatcttttggtccctcacttttttctccg 319  Q
    ||||||||||||||  ||||||||   || |||||| ||||||||||||||||||||||||||||||||||||| ||||||||| |||  |||| ||||     
T  30857796 ttggcttatttgattcaatggtcctctaattaattttaagttttcattttggtcccacaattaataaaacgtatgttttggtccttcagattttcctcct 30857895  T
Q  320 tttgccaaataaatcccgaactgttaactttaactccaaatgtctatggtagaccaaccttaaaagtggtccatcgtagaccttattaatttta 413  Q
    |||| ||||||||| |  ||| |||||||||||||  ||||||||||| | |||||||||||||||||||| |||  |||||||||||||||||    
T  30857896 tttgtcaaataaat-cttaacagttaactttaactttaaatgtctatgatggaccaaccttaaaagtggtctatcagagaccttattaatttta 30857988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 86; E-Value: 8e-41
Query Start/End: Original strand, 224 - 420
Target Start/End: Complemental strand, 27705432 - 27705235
Alignment:
Q  224 cttatttgatcgaatggtccctcaaataatttcaagttttcattttggtcccacaattaataaaacgtatcttttggtccctcacttttttctccgtttg 323  Q
    ||||||||||  |||||| |||||||||||||||||||||||||||||||  |||||||||||||||||  |||||||||||||  |||| |||| ||||    
T  27705432 cttatttgattcaatggttcctcaaataatttcaagttttcattttggtcatacaattaataaaacgtacgttttggtccctcagattttcctccttttg 27705333  T
Q  324 ccaaataaatcccgaactgttaactttaactccaa---atgtctatggtagaccaaccttaaaagtggtccatcgtagaccttattaattttattaattt 420  Q
    |||||||||| | | || ||||||||||| |||||   ||||||||||| |||||||||||||||||||||| | |||| | ||||||| || |||||||    
T  27705332 ccaaataaatacag-acagttaactttaa-tccaaatgatgtctatggtggaccaaccttaaaagtggtccaccatagatcctattaatatttttaattt 27705235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 218 - 373
Target Start/End: Complemental strand, 22049258 - 22049104
Alignment:
Q  218 ttttggcttatttgatcgaatggtccctcaaataatttcaagttttcattttggtcccacaattaataaaacgtatcttttggtccctcacttttttctc 317  Q
    ||||||||||||||| | | | |||||  |||||||||||||||||||||||||||||| |||||||||||||||  ||||||||||||||||||| |||    
T  22049258 ttttggcttatttgaaccattagtcccctaaataatttcaagttttcattttggtcccataattaataaaacgtacgttttggtccctcactttttcctc 22049159  T
Q  318 cgtttgccaaataaatcccgaactgttaactttaactccaaatgtctatggtagac 373  Q
     ||||| ||||||||||||   ||||||| |||||| |||||||||||| ||||||    
T  22049158 tgtttggcaaataaatccc-tgctgttaagtttaaccccaaatgtctattgtagac 22049104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 217 - 418
Target Start/End: Complemental strand, 22308922 - 22308721
Alignment:
Q  217 attttggcttatttgatcgaatggtccctcaaataatttcaagttttcattttggtcccacaattaataaaacgtatcttttggtccctcacttttttct 316  Q
    |||| |||||||| |||||  |||||||  ||||||||||| |||||||||||||||||| ||||||||||||     |||| ||||||||| |||| ||    
T  22308922 atttaggcttattagatcgtttggtcccctaaataatttcatgttttcattttggtcccataattaataaaacaggcgttttagtccctcacattttgct 22308823  T
Q  317 ccgtttgccaaataaatcccgaactgttaactttaactccaaatgtctatggtagaccaaccttaaaagtggtccatcgtagaccttattaattttatta 416  Q
    |||||||||||||||||||     |||||| |||||| ||||||||||||||| |||| ||||||| ||||||||| | ||||| ||||||| ||| |||    
T  22308822 ccgtttgccaaataaatccatggttgttaagtttaaccccaaatgtctatggtggacctaccttaagagtggtccaccatagacattattaaatttttta 22308723  T
Q  417 at 418  Q
    ||    
T  22308722 at 22308721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 238 - 410
Target Start/End: Original strand, 8521269 - 8521440
Alignment:
Q  238 tggtccctcaaataatttcaagttttcattttggtcccacaattaataaaacgtatcttttggtccctcacttttttctccgtttgccaaataaatcccg 337  Q
    |||||||| || ||||||||||||||||||||||||||| || |||||||||  || |||||||||||||| ||| |||||||  | |||||||||||||    
T  8521269 tggtcccttaattaatttcaagttttcattttggtcccataactaataaaactcatgttttggtccctcacgtttgtctccgtcagtcaaataaatcccg 8521368  T
Q  338 aactgttaactttaactccaaatgtctatggtagaccaaccttaaaagtggtccatcgtagaccttattaatt 410  Q
     || |||||||||||| |||||||| |||||| |||||||||||| | ||||||| | |||| | ||||||||    
T  8521369 -acggttaactttaaccccaaatgtgtatggtggaccaaccttaagaatggtccaccatagatcctattaatt 8521440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 222 - 420
Target Start/End: Complemental strand, 30859290 - 30859090
Alignment:
Q  222 ggcttatttgatcgaatggtccctcaaataatttcaagttttcattttggtcccacaattaataaaacgtatcttttggtccctcacttttttctccgtt 321  Q
    ||||||||||||  | | |||||||||||||||||||||||||||||||||||||||||||||||||||||  |||  ||||||||| |||| ||| |||    
T  30859290 ggcttatttgattcattagtccctcaaataatttcaagttttcattttggtcccacaattaataaaacgtacgtttaagtccctcacattttcctctgtt 30859191  T
Q  322 tgccaaataaatcccgaactgttaactttaactccaa---atgtctatggtagaccaaccttaaaagtggtccatcgtagaccttattaattttattaat 418  Q
    |||||||||| ||  | || ||||| |||||| ||||   ||||||||||| |||||| ||||| ||||||||| | |||| | |||||||| | |||||    
T  30859190 tgccaaataagtcttg-accgttaagtttaaccccaaatgatgtctatggtggaccaatcttaagagtggtccaccatagatcctattaattattttaat 30859092  T
Q  419 tt 420  Q
    ||    
T  30859091 tt 30859090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 238 - 391
Target Start/End: Complemental strand, 1010466 - 1010314
Alignment:
Q  238 tggtccctcaaataatttcaagttttcattttggtcccacaattaataaaacgtatcttttggtccctcacttttttctccgtttgccaaataaatcccg 337  Q
    |||||||| || |||||||||||||| |||||||||||| || |||||||||  || |||||||||||||| ||| |||||||  | |||||||||||||    
T  1010466 tggtcccttaattaatttcaagtttttattttggtcccataactaataaaactcatgttttggtccctcacgtttgtctccgtcagtcaaataaatcccg 1010367  T
Q  338 aactgttaactttaactccaaatgtctatggtagaccaaccttaaaagtggtcc 391  Q
     || |||||||||||| |||||||| |||||| |||||||||||| ||||||||    
T  1010366 -acggttaactttaaccccaaatgtgtatggtggaccaaccttaagagtggtcc 1010314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 222 - 434
Target Start/End: Complemental strand, 33174078 - 33173865
Alignment:
Q  222 ggcttatttgatcgaatggtccctcaaataatttcaagttttcattttggtcccacaattaataaaacgtatcttttggtccctcacttttttctccgtt 321  Q
    |||||||| |||||  |||||||| |  |||||||| |||||||||||| ||||||| |||||||||      |||| ||||||||| |||| ||| |||    
T  33174078 ggcttattagatcgtttggtcccttatttaatttcatgttttcattttgatcccacatttaataaaaatggcgttttagtccctcaccttttcctctgtt 33173979  T
Q  322 tgccaaataaatcccgaactgttaactttaactccaaatgtctatggtagaccaaccttaaaagtggtccatcgtagaccttattaattttatt-aattt 420  Q
    ||||||||||||||    ||||||| |||||| ||||||||||||||| |||||||||||| ||||||| | | ||||| | ||||||||| || |||||    
T  33173978 tgccaaataaatccttggctgttaagtttaaccccaaatgtctatggtggaccaaccttaagagtggtctaccatagacttcattaatttttttaaattt 33173879  T
Q  421 taacagttcgatct 434  Q
    |||| ||| |||||    
T  33173878 taaccgtttgatct 33173865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 217 - 420
Target Start/End: Original strand, 30910734 - 30910939
Alignment:
Q  217 attttggcttatttgatcgaatggtccctcaaataatttcaagttttcattttggtcccacaattaataaaacgtatcttttggtccctcacttttttct 316  Q
    |||| |||||||| |||||  |||||||| |  |||||||| ||||||||||||||||||||||||||||||      |||| ||||||||| |||| ||    
T  30910734 atttaggcttattagatcgtttggtcccttatttaatttcatgttttcattttggtcccacaattaataaaaatggcgttttagtccctcacattttcct 30910833  T
Q  317 ccgtttgccaaataaatcccgaactgttaactttaactccaaatg---tctatggtagaccaaccttaaaagtggtccatcgtagaccttattaatttta 413  Q
    | |||| ||||||||||| ||| |||||||||||||| |||||||   ||| |||| |||||||||||| ||||||||| | |||| | |||||||| |     
T  30910834 ctgtttaccaaataaatctcga-ctgttaactttaacaccaaatgatgtctttggtggaccaaccttaagagtggtccaccatagatcctattaattatt 30910932  T
Q  414 ttaattt 420  Q
    |||||||    
T  30910933 ttaattt 30910939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 339 - 434
Target Start/End: Original strand, 1102733 - 1102828
Alignment:
Q  339 actgttaactttaactccaaatgtctatggtagaccaaccttaaaagtggtccatcgtagaccttattaattttattaattttaacagttcgatct 434  Q
    ||||||||||||||| |||||||||||||||||||||||||||| ||||||||| | |||| |||||||||| | ||||||| ||| ||| |||||    
T  1102733 actgttaactttaaccccaaatgtctatggtagaccaaccttaagagtggtccaccatagatcttattaattattttaatttaaaccgtttgatct 1102828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 218 - 336
Target Start/End: Original strand, 22307502 - 22307620
Alignment:
Q  218 ttttggcttatttgatcgaatggtccctcaaataatttcaagttttcattttggtcccacaattaataaaacgtatcttttggtccctcacttttttctc 317  Q
    |||||||||||| |||||  |||||||  ||| ||||||| |||||||||||||| ||| ||||||||||||   | |||| |||||||||||||| |||    
T  22307502 ttttggcttattagatcgtttggtcccctaaacaatttcatgttttcattttggttccataattaataaaacaggtgttttagtccctcactttttgctc 22307601  T
Q  318 cgtttgccaaataaatccc 336  Q
     ||||||||||||||||||    
T  22307602 tgtttgccaaataaatccc 22307620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 222 - 331
Target Start/End: Original strand, 15941272 - 15941380
Alignment:
Q  222 ggcttatttgatcgaatggtccctcaaataatttcaagttttcattttggtcccacaattaataaaacgtatcttttggtccctcacttttttctccgtt 321  Q
    ||||||||||||| || ||||| |||| |||||| |||||||||||||| | ||| ||||||||||||||| | ||||||||||||||||||  ||||||    
T  15941272 ggcttatttgatccaacggtccttcaa-taattttaagttttcattttgattccataattaataaaacgtaccatttggtccctcactttttcttccgtt 15941370  T
Q  322 tgccaaataa 331  Q
    || |||||||    
T  15941371 tgtcaaataa 15941380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 238 - 377
Target Start/End: Original strand, 32757839 - 32757978
Alignment:
Q  238 tggtccctcaaataatttcaagttttcattttggtcccacaattaataaaacgtatcttttggtccctcacttttttctccgtttgccaaataaatcccg 337  Q
    ||||||||||||||||||| ||||||||||||||||||| || |||||||||  || |||||||||||||  ||   |||||   | |||||||||||      
T  32757839 tggtccctcaaataatttccagttttcattttggtcccataaataataaaactcatgttttggtccctcaagttcacctccgccggtcaaataaatccat 32757938  T
Q  338 aactgttaactttaactccaaatgtctatggtagaccaac 377  Q
       ||||||||||||| ||||||||||||||| |||||||    
T  32757939 gggtgttaactttaaccccaaatgtctatggtggaccaac 32757978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 222 - 336
Target Start/End: Original strand, 34894147 - 34894261
Alignment:
Q  222 ggcttatttgatcgaatggtccctcaaataatttcaagttttcattttggtcccacaattaataaaacgtatcttttggtccctcacttttttctccgtt 321  Q
    |||||||| |||| | |||||||| || ||||||| | ||||||||||||||||  || |||||||| ||| |||||||||||| | |||| ||||||||    
T  34894147 ggcttattagatccattggtcccttaattaatttccatttttcattttggtcccgtaagtaataaaaagtaccttttggtcccttagttttgtctccgtt 34894246  T
Q  322 tgccaaataaatccc 336  Q
    ||||||| |||||||    
T  34894247 tgccaaaaaaatccc 34894261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 214 - 283
Target Start/End: Complemental strand, 41798074 - 41798004
Alignment:
Q  214 tttattttg-gcttatttgatcgaatggtccctcaaataatttcaagttttcattttggtcccacaattaa 283  Q
    ||||||||| |||||||||||| | |||||||||||||||||||||||||| |||||||||||||||||||    
T  41798074 tttattttgagcttatttgatccattggtccctcaaataatttcaagtttttattttggtcccacaattaa 41798004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 295 - 410
Target Start/End: Original strand, 324109 - 324225
Alignment:
Q  295 ttttggtccctcacttttttct-ccgtttgccaaataaatcccgaactgttaacttt-aactccaaatgtctatggtagaccaaccttaaaagtggtcca 392  Q
    ||||||||| ||| ||||| || ||||||  ||||||||| || ||||||||||||| ||||| ||||||||||||| ||||||| |||| |||||||||    
T  324109 ttttggtccttcattttttccttccgtttctcaaataaattcc-aactgttaacttttaactctaaatgtctatggtggaccaactttaatagtggtcca 324207  T
Q  393 tcgtagaccttattaatt 410  Q
    || |||||||||||||||    
T  324208 tcatagaccttattaatt 324225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 236 - 336
Target Start/End: Complemental strand, 24509140 - 24509040
Alignment:
Q  236 aatggtccctcaaataatttcaagttttcattttggtcccacaattaataaaacgtatcttttggtccctcacttttttctccgtttgccaaataaatcc 335  Q
    |||||||||| || ||||| | | ||||||||||||||||| || |||||||||||| |||||||||||| | |||| |||| |||||||||| ||||||    
T  24509140 aatggtcccttaattaattaccaattttcattttggtcccataagtaataaaacgtaccttttggtcccttagttttctctctgtttgccaaaaaaatcc 24509041  T
Q  336 c 336  Q
    |    
T  24509040 c 24509040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 238 - 336
Target Start/End: Original strand, 24503198 - 24503296
Alignment:
Q  238 tggtccctcaaataatttcaagttttcattttggtcccacaattaataaaacgtatcttttggtccctcacttttttctccgtttgccaaataaatccc 336  Q
    |||||||| || ||||| | | ||||||||||||||||| || |||||||||||| |||||||||||| | |||| |||| |||||||||| |||||||    
T  24503198 tggtcccttaattaattaccaattttcattttggtcccataagtaataaaacgtaccttttggtcccttagttttctctctgtttgccaaaaaaatccc 24503296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 250 - 412
Target Start/End: Original strand, 9169612 - 9169774
Alignment:
Q  250 taatttcaagttttcattttggtcccacaattaataaaac-gtatcttttggtccctcacttttttctccgtttgccaaataaatccc-gaactgttaac 347  Q
    |||||||||||||||||||| |||||| ||||||||||||  ||| ||||||||  | | || | |||||||  | |||||||||||| |||  ||||||    
T  9169612 taatttcaagttttcattttagtcccataattaataaaactctatgttttggtcttttaattgtctctccgtcggtcaaataaatccctgaa--gttaac 9169709  T
Q  348 tttaactccaaatgtctatggtagaccaaccttaaaagtggtccatcgtagaccttattaatttt 412  Q
    |||||| |||||||||||| || ||||||  ||| |  ||||||||| |||||| ||||||||||    
T  9169710 tttaaccccaaatgtctatagtggaccaatattatagatggtccatcatagaccgtattaatttt 9169774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 247 - 423
Target Start/End: Complemental strand, 11263789 - 11263615
Alignment:
Q  247 aaataatttcaagttttcattttggtcccacaattaataaaacgtatcttttggtccctcacttttttctccgtttgccaaataaatcccgaactgttaa 346  Q
    ||||||||| || |||| |||||||||| | ||| |||||||||||| |||| || | |||  |||||||||||||  |||||||||   || | |||||    
T  11263789 aaataattttaaatttttattttggtcctataatcaataaaacgtattttttagttcttcatatttttctccgtttatcaaataaattgtga-cagttaa 11263691  T
Q  347 ctttaactccaaatgtctatggtagaccaaccttaaaagtggtccatcgtagaccttattaattttattaattttaa 423  Q
     ||||||| |||||||||||  |  ||||| ||||||| || |||||| || |||||||||||||| ||||||||||    
T  11263690 -tttaacttcaaatgtctataatgaaccaaacttaaaaatgatccatcataaaccttattaattttgttaattttaa 11263615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 222 - 328
Target Start/End: Complemental strand, 34899069 - 34898963
Alignment:
Q  222 ggcttatttgatcgaatggtccctcaaataatttcaagttttcattttggtcccacaattaataaaacgtatcttttggtccctcacttttttctccgtt 321  Q
    |||||||| |||| | |||||||| || ||||||  | ||||||||||||||||| || |||||||| |||  ||||||||||| | |||| ||||||||    
T  34899069 ggcttattagatccattggtcccttaattaattttcatttttcattttggtcccataagtaataaaaagtacattttggtcccttagttttgtctccgtt 34898970  T
Q  322 tgccaaa 328  Q
    |||||||    
T  34898969 tgccaaa 34898963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 250 - 392
Target Start/End: Complemental strand, 8523836 - 8523693
Alignment:
Q  250 taatttcaagttttcattttggtcccacaattaataaaacgtatcttttggtccctcacttttttctccgtttgccaaataaatcccgaactgttaactt 349  Q
    ||||||||||||||||||||||||||| || |||||||||  || ||||| ||| |||  ||| |||||||  | ||||||||||| | || ||||||||    
T  8523836 taatttcaagttttcattttggtcccataactaataaaactcatgttttgatccttcatgtttgtctccgtcagtcaaataaatcctg-acagttaactt 8523738  T
Q  350 taactcc---aaatgtctatggtagaccaaccttaaaagtggtcca 392  Q
    |||| ||   |||||| |||||| |||||||||| | |||||||||    
T  8523737 taaccccccaaaatgt-tatggtggaccaaccttcagagtggtcca 8523693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 342 - 392
Target Start/End: Complemental strand, 4127251 - 4127201
Alignment:
Q  342 gttaactttaactccaaatgtctatggtagaccaaccttaaaagtggtcca 392  Q
    |||||||||||| ||||||||||||| |||| ||| |||||||||||||||    
T  4127251 gttaactttaaccccaaatgtctatgatagatcaatcttaaaagtggtcca 4127201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 247 - 289
Target Start/End: Original strand, 11262279 - 11262321
Alignment:
Q  247 aaataatttcaagttttcattttggtcccacaattaataaaac 289  Q
    ||||||||| ||||||||||||| |||||||||||||||||||    
T  11262279 aaataattttaagttttcattttagtcccacaattaataaaac 11262321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 295 - 420
Target Start/End: Original strand, 10735834 - 10735959
Alignment:
Q  295 ttttggtccctcacttttttctccgtttgccaaataaatcccgaactgttaactttaactccaaatgtctatggtagaccaaccttaaaagtggtccatc 394  Q
    ||||||||||||   |||| ||||||| | |||| |  |||| ||| ||||||||||||||||||| |||||||| ||||||| |||| ||  ||||| |    
T  10735834 ttttggtccctcttgttttgctccgttagtcaaaaaggtccctaaccgttaactttaactccaaatatctatggtggaccaacgttaacagcagtccacc 10735933  T
Q  395 gtagaccttattaattttattaattt 420  Q
     |||| | |||||||| | |||||||    
T  10735934 atagatcatattaattattttaattt 10735959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 222 - 267
Target Start/End: Complemental strand, 15941454 - 15941409
Alignment:
Q  222 ggcttatttgatcgaatggtccctcaaataatttcaagttttcatt 267  Q
    |||||||| |||||  ||||||||||||||||||||||||||||||    
T  15941454 ggcttattagatcgtttggtccctcaaataatttcaagttttcatt 15941409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 238 - 307
Target Start/End: Complemental strand, 32759150 - 32759081
Alignment:
Q  238 tggtccctcaaataatttcaagttttcattttggtcccacaattaataaaacgtatcttttggtccctca 307  Q
    ||||||||||||||||||  |||||||||||| || ||| || |||||||||  || |||||||||||||    
T  32759150 tggtccctcaaataattttcagttttcattttagttccataaataataaaactcatgttttggtccctca 32759081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 342 - 422
Target Start/End: Complemental strand, 35081435 - 35081355
Alignment:
Q  342 gttaactttaactccaaatgtctatggtagaccaaccttaaaagtggtccatcgtagaccttattaattttattaatttta 422  Q
    ||||||||||||  ||||||||||| || || ||||||||| ||| ||||| | || |||||| ||||||| |||||||||    
T  35081435 gttaactttaacctcaaatgtctatagtggatcaaccttaagagttgtccaccataaaccttaataatttttttaatttta 35081355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 250 - 288
Target Start/End: Original strand, 20538079 - 20538117
Alignment:
Q  250 taatttcaagttttcattttggtcccacaattaataaaa 288  Q
    ||||||||| ||||||||||||||||| |||||||||||    
T  20538079 taatttcaaattttcattttggtcccataattaataaaa 20538117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 237 - 274
Target Start/End: Original strand, 324080 - 324117
Alignment:
Q  237 atggtccctcaaataatttcaagttttcattttggtcc 274  Q
    |||||| ||||||||||||||| |||||||||||||||    
T  324080 atggtcactcaaataatttcaatttttcattttggtcc 324117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 295 - 392
Target Start/End: Original strand, 33172624 - 33172720
Alignment:
Q  295 ttttggtccctcacttttttctccgtttgccaaataaatcccgaactgttaactttaactccaaatgtctatggtagaccaaccttaaaagtggtcca 392  Q
    |||| |||| |||| ||||||||||||||||||||||||||     |||||| |||||| |||||| ||||| || || |||| |||| |||||||||    
T  33172624 ttttagtccttcacatttttctccgtttgccaaataaatccatcggtgttaagtttaaccccaaatttctatagtgga-caacattaagagtggtcca 33172720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 236 - 276
Target Start/End: Complemental strand, 9220564 - 9220524
Alignment:
Q  236 aatggtccctcaaataatttcaagttttcattttggtccca 276  Q
    ||||||||||||| ||||||| ||||||||||||| |||||    
T  9220564 aatggtccctcaactaatttccagttttcattttgttccca 9220524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 155; Significance: 5e-82; HSPs: 63)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 155; E-Value: 5e-82
Query Start/End: Original strand, 218 - 424
Target Start/End: Original strand, 47454331 - 47454536
Alignment:
Q  218 ttttggcttatttgatcgaatggtccctcaaataatttcaagttttcattttggtcccacaattaataaaacgtatcttttggtccctcacttttttctc 317  Q
    ||||||||||||||||| | |||||||||||||||||||||| ||||||||||||||||||||||||||||||||  |||||||||||||  |||||||     
T  47454331 ttttggcttatttgatccagtggtccctcaaataatttcaagctttcattttggtcccacaattaataaaacgtacattttggtccctcaagtttttctt 47454430  T
Q  318 cgtttgccaaataaatcccgaactgttaactttaactccaaatgtctatggtagaccaaccttaaaagtggtccatcgtagaccttattaattttattaa 417  Q
    |||||||||||||||||||| ||| ||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  47454431 cgtttgccaaataaatcccg-actattaactttaactctaaatgtctatggtagaccaaccttaagagtggtccatcgtagaccttattaattttattaa 47454529  T
Q  418 ttttaac 424  Q
    |||||||    
T  47454530 ttttaac 47454536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 144; E-Value: 2e-75
Query Start/End: Original strand, 221 - 459
Target Start/End: Complemental strand, 32256514 - 32256277
Alignment:
Q  221 tggcttatttgatcgaatggtccctcaaataatttcaagttttcattttggtcccacaattaataaaacgtatcttttggtccctcacttttttctccgt 320  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||| |||||||||||||||||||| |||| |    
T  32256514 tggcttatttgatccaatggtccctcaaataatttcaagttttcattttggtcccataattaataaaatgtaccttttggtccctcactttttcctccat 32256415  T
Q  321 ttgccaaataaatcccgaactgttaactttaactccaaatgtctatggtagaccaaccttaaaagtggtccatcgtagaccttattaattttattaattt 420  Q
    ||||||||||||| || ||| ||||||||||||| |||||||||||||| ||||||| ||||||||||||||| ||| |||||| | ||||| |||||||    
T  32256414 ttgccaaataaattcc-aaccgttaactttaacttcaaatgtctatggtggaccaacattaaaagtggtccattgtaaaccttaat-attttgttaattt 32256317  T
Q  421 taacagttcgatctatttatcataata-ggaccgttagat 459  Q
    |||| |||||||| ||||||||||| | ||||||||||||    
T  32256316 taaccgttcgatccatttatcataaaagggaccgttagat 32256277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 129; E-Value: 2e-66
Query Start/End: Original strand, 213 - 459
Target Start/End: Original strand, 43459443 - 43459690
Alignment:
Q  213 atttattt-tggcttatttgatcgaatggtccctcaaataatttcaagttttcattttggtcccacaattaataaaacgtatcttttggtccctcacttt 311  Q
    |||||||| |||||||||||||| | | |||||  |||||||||||||||||||||||||||||||||||||||||||||   |||  ||||||||  ||    
T  43459443 atttatttatggcttatttgatccattagtcccctaaataatttcaagttttcattttggtcccacaattaataaaacgtgcgtttaagtccctcatgtt 43459542  T
Q  312 tttctccgtttgccaaataaatcccgaactgttaactttaactccaaatgtctatggtagaccaaccttaaaagtggtccatcgtagaccttattaattt 411  Q
    || |||||||||||||||||||| ||  ||||||| |||||||||||||||||||||| || ||||||||||| |||| |||||||||||||||||||||    
T  43459543 ttcctccgtttgccaaataaatctcgg-ctgttaagtttaactccaaatgtctatggtggatcaaccttaaaaatggtacatcgtagaccttattaattt 43459641  T
Q  412 tattaattttaacagttcgatctatttatcataatag-gaccgttagat 459  Q
    | |||||||||||  ||||||||||||||||||| || |||||||||||    
T  43459642 tgttaattttaaccattcgatctatttatcataaaagagaccgttagat 43459690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 120; E-Value: 4e-61
Query Start/End: Original strand, 222 - 424
Target Start/End: Complemental strand, 6173568 - 6173369
Alignment:
Q  222 ggcttatttgatcgaatggtccctcaaataatttcaagttttcattttggtcccacaattaataaaacgtatcttttggtccctcacttttttctccgtt 321  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||  |||| |||||||||||||||  ||||||||||||||||||| |||||||    
T  6173568 ggcttatttgatccaatggtccctcaaataatttcaagttttcattttgtacccataattaataaaacgtacattttggtccctcactttttcctccgtt 6173469  T
Q  322 tgccaaataaatcccgaactgttaactttaactccaaatgtctatggtagaccaaccttaaaagtggtccatcgtagaccttattaattttattaatttt 421  Q
    ||||||||||||||  | || ||||||||||||| |||| ||||| || ||||||| |||||||||||||||||||||||||| ||||||| ||||| ||    
T  6173468 tgccaaataaatcc--atctattaactttaactctaaatatctatagtggaccaactttaaaagtggtccatcgtagacctta-taattttgttaatctt 6173372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 116; E-Value: 1e-58
Query Start/End: Original strand, 219 - 445
Target Start/End: Original strand, 11501175 - 11501400
Alignment:
Q  219 tttggcttatttgatcgaatggtccctcaaataatttcaagttttcattttggtcccacaattaataaaacgtatc-ttttggtccctcacttttttctc 317  Q
    |||| |||||| |||||  |||||| | || |||||||| |||||||||||||||||||| |||||||||  || | |||| ||||||||| |||| |||    
T  11501175 tttgacttattagatcgtttggtcctttaattaatttcatgttttcattttggtcccacagttaataaaaa-tagcattttagtccctcaccttttcctc 11501273  T
Q  318 cgtttgccaaataaatcccgaactgttaactttaactccaaatgtctatggtagaccaaccttaaaagtggtccatcgtagaccttattaattttattaa 417  Q
    | ||||||||||||||||||| ||||||||||||||| |||||||||||||| ||||||||||||||||||| ||| |||||||||||||||||| ||||    
T  11501274 catttgccaaataaatcccga-ctgttaactttaacttcaaatgtctatggtggaccaaccttaaaagtggttcattgtagaccttattaattttgttaa 11501372  T
Q  418 ttttaacagttcgatctatttatcataa 445  Q
    |||||||  |||||||||||||||||||    
T  11501373 ttttaaccattcgatctatttatcataa 11501400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 105; E-Value: 4e-52
Query Start/End: Original strand, 238 - 450
Target Start/End: Complemental strand, 41079936 - 41079726
Alignment:
Q  238 tggtccctcaaataatttcaagttttcattttggtcccacaattaataaaacgtatcttttggtccctcacttttttctccgtttgccaaataaatcccg 337  Q
    ||||||||||| ||||||| | |||| |||||||||||||||| |||||||||||  ||||||||||| |  |||| |||||||||| |||||||||||     
T  41079936 tggtccctcaattaatttccattttttattttggtcccacaat-aataaaacgtacgttttggtcccttatcttttcctccgtttgctaaataaatccct 41079838  T
Q  338 aactgttaactttaactccaaatgtctatggtagaccaaccttaaaagtggtccatcgtagaccttattaattttattaattttaacagttcgatctatt 437  Q
    | | ||||||||||||||||||| |||||||| || |||| |||||||||||||||||||||||||||||||||| || ||||||||  ||| |||||||    
T  41079837 acc-gttaactttaactccaaatatctatggtggaacaacattaaaagtggtccatcgtagaccttattaattttgttgattttaaccattcaatctatt 41079739  T
Q  438 tatcataatagga 450  Q
    |||||||| ||||    
T  41079738 tatcataaaagga 41079726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 222 - 423
Target Start/End: Complemental strand, 47456493 - 47456300
Alignment:
Q  222 ggcttatttgatcgaatggtccctcaaataatttcaagttttcattttggtcccacaattaataaaacgtatcttttggtccctcacttttttctccgtt 321  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||| |||||  || |||    
T  47456493 ggcttatttgatccaatggtccctcaaataatttcaagttttcattttggtcccacaattaataaaacgtactttttggtccctcattttttcttctgtt 47456394  T
Q  322 tgccaaataaatcccgaactgttaac-tttaactccaaatgtctatggtagaccaaccttaaaagtggtccatcgtagaccttattaattttattaattt 420  Q
    ||||||||||||| || ||||||||| ||||||        |||||||| || |||| |||||||||||||||| ||||||||||||||| ||||||| |    
T  47456393 tgccaaataaatctcg-actgttaacttttaac--------tctatggtggaacaactttaaaagtggtccatcatagaccttattaattgtattaatct 47456303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 253 - 459
Target Start/End: Complemental strand, 22337457 - 22337252
Alignment:
Q  253 tttcaagttttcattttggtcccacaattaataaaacgtatcttttggtccctcacttttttctccgtttgccaaataaatcccgaactgttaactttaa 352  Q
    ||||| |||||||||||| |||||||||||||||||  |  | ||  |||||| || |||| ||||||||||||||||||||| || | ||||| |||||    
T  22337457 tttcatgttttcattttgatcccacaattaataaaaa-tggcattcagtcccttacattttcctccgtttgccaaataaatcctgacc-gttaaatttaa 22337360  T
Q  353 ctccaaatgtctatggtagaccaaccttaaaagtggtccatcgtagaccttattaattttattaattttaacagttcgatctatttatcataata-ggac 451  Q
    || |||||||||||||| ||||||||||||| || || || ||||||||||||||||||| |||||||||||| ||||||||||||||||||| | ||||    
T  22337359 cttcaaatgtctatggtggaccaaccttaaatgtagtacaccgtagaccttattaattttgttaattttaacatttcgatctatttatcataaaagggac 22337260  T
Q  452 cgttagat 459  Q
    ||||||||    
T  22337259 cgttagat 22337252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 250 - 461
Target Start/End: Complemental strand, 40812703 - 40812489
Alignment:
Q  250 taatttcaagttttcattttggtcccacaattaataaaacgtatcttttggtccctcacttttttctccgtttgccaaataaatcccgaactgttaactt 349  Q
    |||||||| |||||||||||||| ||| |||||||||||||||  ||||| |||||||  |||| ||| ||||| |||||| ||||||| ||||| ||||    
T  40812703 taatttcatgttttcattttggttccataattaataaaacgtacgttttgctccctcatattttcctctgtttgtcaaatatatcccga-ctgtttactt 40812605  T
Q  350 taactccaaatgtctatggtagaccaaccttaaaagtggtccatcgtagaccttattaa---ttttattaattttaacagttcgatctatttatcataat 446  Q
    |||||||||||  | ||||| ||||||||||||||||| ||||||||||| ||||||||   |||| ||||||||||  |||||||||||||||| |||     
T  40812604 taactccaaataaccatggtggaccaaccttaaaagtgatccatcgtagatcttattaatttttttgttaattttaatcgttcgatctatttatcttaaa 40812505  T
Q  447 a-ggaccgttagattt 461  Q
    | ||||||||||||||    
T  40812504 agggaccgttagattt 40812489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 238 - 420
Target Start/End: Original strand, 32255003 - 32255187
Alignment:
Q  238 tggtccctcaaataatttcaagttttcattttggtcccacaattaataaaacgtatcttttggtccctcacttttttctccgtttgccaaataaatcccg 337  Q
    ||||||||||||||||||||| |||| |||||||||||| |||||||||||||||  ||||| ||||||||||||| |||||||||||||||||||||||    
T  32255003 tggtccctcaaataatttcaaatttttattttggtcccataattaataaaacgtacattttgatccctcactttttcctccgtttgccaaataaatcccg 32255102  T
Q  338 aactgttaactttaactccaa---atgtctatggtagaccaaccttaaaagtggtccatcgtagaccttattaattttattaattt 420  Q
     || ||||| |||||| ||||   |||| |||||| |||||||||||| ||||||||| | |||| | |||||||| | |||||||    
T  32255103 -acggttaagtttaaccccaaatgatgtttatggtggaccaaccttaagagtggtccaccatagatcctattaattattttaattt 32255187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 217 - 335
Target Start/End: Original strand, 33096862 - 33096980
Alignment:
Q  217 attttggcttatttgatcgaatggtccctcaaataatttcaagttttcattttggtcccacaattaataaaacgtatcttttggtccctcacttttttct 316  Q
    |||| ||||||||||||| |||||||||||||||||||||||||| ||||||| | ||||||||||||||||| || |||||||||||||||||||| ||    
T  33096862 atttaggcttatttgatccaatggtccctcaaataatttcaagttctcattttaggcccacaattaataaaacttaccttttggtccctcactttttcct 33096961  T
Q  317 ccgtttgccaaataaatcc 335  Q
    |||||||||||||||||||    
T  33096962 ccgtttgccaaataaatcc 33096980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 86; E-Value: 8e-41
Query Start/End: Original strand, 221 - 461
Target Start/End: Complemental strand, 22538967 - 22538727
Alignment:
Q  221 tggcttatttgatcgaatggtccctcaaataatttcaagttttcattttggtcccacaattaataaaacgtatcttttggtccctcacttttttctccgt 320  Q
    ||||||||| |||||  |||||||| |  |||||||| |||||| |||||||||||||||||||||||   |  |||| ||||||||  |||| ||||||    
T  22538967 tggcttattagatcgtttggtcccttatttaatttcatgttttctttttggtcccacaattaataaaaatgacgttttagtccctcatcttttcctccgt 22538868  T
Q  321 ttgccaaataaatcccgaactgttaactttaactccaaatgtctatggtagaccaaccttaaaagtggtccatcgtagaccttattaattttattaattt 420  Q
    |||||||||||||| ||| | ||||||||||||||||||| ||||||||  |||||| ||||||| |||| ||||||||||| ||||||||| || ||||    
T  22538867 ttgccaaataaatctcga-cggttaactttaactccaaatatctatggtgtaccaacattaaaagcggtctatcgtagacctcattaattttgtttattt 22538769  T
Q  421 taacagttcgatctatttatcataata-ggaccgttagattt 461  Q
     ||   ||||||||| |||| |||| | ||||||||||||||    
T  22538768 caatcattcgatctaattatgataaaagggaccgttagattt 22538727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 86; E-Value: 8e-41
Query Start/End: Original strand, 221 - 434
Target Start/End: Complemental strand, 40509853 - 40509640
Alignment:
Q  221 tggcttatttgatcgaatggtccctcaaataatttcaagttttcattttggtcccacaattaataaaacgtatcttttggtccctcacttttttctccgt 320  Q
    ||||||||||| |  |||||||||  ||||||||||||||||||||||||||||||||||||||||||||||  |||  || ||||||||||| ||||||    
T  40509853 tggcttatttgtttcaatggtcccctaaataatttcaagttttcattttggtcccacaattaataaaacgtacgtttaagttcctcactttttcctccgt 40509754  T
Q  321 ttgccaaataaatcccgaactgttaactttaactccaaatgtctatggtagaccaaccttaaaagtggtccatcgtagaccttattaattttattaattt 420  Q
    || |||||||||||      |||||| |||||| |||||||||||| || |||||||||||| ||||||||| | ||||| | ||||||||| | |||||    
T  40509753 ttaccaaataaatcattcggtgttaagtttaaccccaaatgtctatagtggaccaaccttaagagtggtccaccatagacttcattaattttttaaattt 40509654  T
Q  421 taacagttcgatct 434  Q
    | || ||| |||||    
T  40509653 tgactgtttgatct 40509640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 238 - 346
Target Start/End: Original strand, 30333299 - 30333407
Alignment:
Q  238 tggtccctcaaataatttcaagttttcattttggtcccacaattaataaaacgtatcttttggtccctcacttttttctccgtttgccaaataaatcccg 337  Q
    |||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||| |     
T  30333299 tggtcccctaaataatttcaagttttcattttggtcccacaattaataaaacgtatcttttggtccctcatttttttctccgtttgtcaaataaatcaca 30333398  T
Q  338 aactgttaa 346  Q
    |||||||||    
T  30333399 aactgttaa 30333407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 222 - 369
Target Start/End: Original strand, 30310119 - 30310266
Alignment:
Q  222 ggcttatttgatcgaatggtccctcaaataatttcaagttttcattttggtcccacaattaataaaacgtatcttttggtccctcacttttttctccgtt 321  Q
    ||||||||||||| ||| |||||| ||||||||||||||||||||||| ||||||||||||||||||||||  |||  || ||||| ||||| |||||||    
T  30310119 ggcttatttgatccaatagtcccttaaataatttcaagttttcatttttgtcccacaattaataaaacgtacatttgagttcctcattttttcctccgtt 30310218  T
Q  322 tgccaaataaatcccgaactgttaactttaactccaaatgtctatggt 369  Q
    |||||||||||||||  ||||||||  ||||| |||||||||||||||    
T  30310219 tgccaaataaatcccagactgttaaagttaaccccaaatgtctatggt 30310266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 225 - 420
Target Start/End: Complemental strand, 43460938 - 43460742
Alignment:
Q  225 ttatttgatcgaatggtccctcaaataatttcaagttttcattttggtcccacaattaataaaacgtatcttttggtccctcacttttttctccgtttgc 324  Q
    |||||||||  |||| |||||||||| |||| ||||||||||||||||||||||||||||||||||||  |||| |||||||||||||| |||| |||||    
T  43460938 ttatttgattcaatgatccctcaaattatttgaagttttcattttggtcccacaattaataaaacgtacattttagtccctcactttttcctccatttgc 43460839  T
Q  325 caaataaatcccgaactgttaactttaactccaa--atgtctatggtagaccaaccttaaaagtggtccatcgtagaccttattaattttattaattt 420  Q
    ||||||||| ||  || ||||| |||||||| ||  ||||||||||| ||||||| |||| ||||||||| | |||| | |||||||| | |||||||    
T  43460838 caaataaat-cctcacagttaagtttaactcaaattatgtctatggtggaccaactttaagagtggtccaccatagatcctattaattattttaattt 43460742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 223 - 424
Target Start/End: Original strand, 40508377 - 40508578
Alignment:
Q  223 gcttatttgatcgaatggtccctcaaataatttcaagttttcattttggtcccacaattaataaaacgtatcttttggtccctcacttttttctccgttt 322  Q
    |||||||||||| |||||||||  ||||||||||||||||||||||| ||||||||||||||||||||||  |||  |||||||||||||| |||||||     
T  40508377 gcttatttgatccaatggtcccctaaataatttcaagttttcatttttgtcccacaattaataaaacgtacgtttaagtccctcactttttcctccgtta 40508476  T
Q  323 gccaaataaatcccgaactgttaactttaactccaaatgtctatggtagaccaaccttaaaagtggtccatcgtagaccttattaattttattaatttta 422  Q
    |||||||||||||     |||||| |||||  ||||||||||||||| || ||| ||||| ||| ||||| | ||||  | ||||||||| | |||||||    
T  40508477 gccaaataaatccttcggtgttaagtttaatcccaaatgtctatggtggatcaatcttaagagttgtccaccatagatttcattaattttttaaatttta 40508576  T
Q  423 ac 424  Q
    ||    
T  40508577 ac 40508578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 81; E-Value: 8e-38
Query Start/End: Original strand, 221 - 434
Target Start/End: Complemental strand, 22115284 - 22115070
Alignment:
Q  221 tggcttatttgatcgaatggtccc-tcaaataatttcaagttttcattttggtcccacaattaataaaacgtatcttttggtccctcacttttttctccg 319  Q
    ||||||||||| |  ||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||  |||  || ||||||||||| |||||    
T  22115284 tggcttatttgtttcaatggtcccctaaaataatttcaagttttcattttggtcccacaattaataaaacgtacgtttaagttcctcactttttcctccg 22115185  T
Q  320 tttgccaaataaatcccgaactgttaactttaactccaaatgtctatggtagaccaaccttaaaagtggtccatcgtagaccttattaattttattaatt 419  Q
    ||  |||||||||||      |||||| |||||| |||||||||||| || |||||||||||| ||||||||| | ||||| | ||||||||| | ||||    
T  22115184 ttnaccaaataaatcnttcggtgttaagtttaaccccaaatgtctatagtggaccaaccttaagagtggtccaccatagacttcattaattttttaaatt 22115085  T
Q  420 ttaacagttcgatct 434  Q
    || || ||| |||||    
T  22115084 ttgactgtttgatct 22115070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 223 - 334
Target Start/End: Complemental strand, 45455489 - 45455378
Alignment:
Q  223 gcttatttgatcgaatggtccctcaaataatttcaagttttcattttggtcccacaattaataaaacgtatcttttggtccctcacttttttctccgttt 322  Q
    ||||||||||||  ||||||||| || ||||||||| |||||||||||||||||||||||||||||||||  ||||| ||||||||||||||||||||||    
T  45455489 gcttatttgatccgatggtcccttaattaatttcaaattttcattttggtcccacaattaataaaacgtacattttgatccctcacttttttctccgttt 45455390  T
Q  323 gccaaataaatc 334  Q
    ||||||||||||    
T  45455389 gccaaataaatc 45455378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 220 - 434
Target Start/End: Complemental strand, 4300168 - 4299954
Alignment:
Q  220 ttggcttatttgatcgaatggtccctcaaataatttcaagttttcattttggtcccacaattaataaaacgtatcttttggtccctcacttttttctccg 319  Q
    ||||||||||||||| ||| |||||   |||||||||||||||||||||||||||||||||||||||||||||  |||  |||||||||||||| ||| |    
T  4300168 ttggcttatttgatccaatcgtcccctgaataatttcaagttttcattttggtcccacaattaataaaacgtacgtttaagtccctcactttttcctctg 4300069  T
Q  320 tttgccaaataaatcccgaactgttaactttaactccaaatgtctatggtagaccaaccttaaaagtggtccatcgtagaccttattaattttattaatt 419  Q
    |||||||||||||||      |||||| |||||| ||||| |||||| || || ||||||||| ||||| ||| | ||||| | ||||||||| | ||||    
T  4300068 tttgccaaataaatctttcggtgttaagtttaaccccaaacgtctatagtggatcaaccttaagagtggcccaccatagacttcattaattttttaaatt 4299969  T
Q  420 ttaacagttcgatct 434  Q
    || || ||| |||||    
T  4299968 ttgaccgtttgatct 4299954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 250 - 408
Target Start/End: Complemental strand, 47060565 - 47060408
Alignment:
Q  250 taatttcaagttttcattttggtcccacaattaataaaacgtatcttttggtccctcacttttttctccgtttgccaaataaatcccgaactgttaactt 349  Q
    |||||| |||||||||||||||||| | |||||||||||||||  ||||||||||||||  |||| |||||||||||||||||| ||| |||||||| ||    
T  47060565 taattttaagttttcattttggtcctataattaataaaacgtacgttttggtccctcacccttttttccgtttgccaaataaat-ccggactgttaagtt 47060467  T
Q  350 taactccaaatgtctatggtagaccaaccttaaaagtggtccatcgtagaccttattaa 408  Q
    |||| |||||||| |||||| |||||||||||| | | ||||| | |||||||||||||    
T  47060466 taacaccaaatgtatatggtggaccaaccttaagaatagtccaccatagaccttattaa 47060408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 217 - 334
Target Start/End: Original strand, 32602926 - 32603043
Alignment:
Q  217 attttggcttatttgatcgaatggtccctcaaataatttcaagttttcattttggtcccacaattaataaaacgtatcttttggtccctcacttttttct 316  Q
    |||| ||||||||||||| | |||||| ||||||||||||||||||| |||||||||||| |||||||||||||||  |||| |||||||||||||| ||    
T  32602926 atttaggcttatttgatccattggtccttcaaataatttcaagtttttattttggtcccataattaataaaacgtacgttttagtccctcactttttact 32603025  T
Q  317 ccgtttgccaaataaatc 334  Q
    ||||||||||||||||||    
T  32603026 ccgtttgccaaataaatc 32603043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 222 - 412
Target Start/End: Original strand, 47059106 - 47059297
Alignment:
Q  222 ggcttatttgatcgaatggtccctcaaataatttcaagttttcattttggtcccacaattaataaaacgtatcttttggtccctcacttttttctccgtt 321  Q
    |||||||| |||  |||||||||  || |||||| |||||||||||||||||| ||||||||||||| |||  ||||| ||||||||||||| |||||||    
T  47059106 ggcttattagattcaatggtcccctaattaattttaagttttcattttggtcctacaattaataaaatgtacgttttgatccctcactttttcctccgtt 47059205  T
Q  322 tgccaaataaatcccgaactgttaactttaa--ctccaaatgtctatggtagaccaaccttaaaagtggtccatcgtagaccttattaatttt 412  Q
    |||||||||||||| | || ||||| |||||  ||||||| ||||||||| || ||||||||| ||| | ||| | |||||||||||||||||    
T  47059206 tgccaaataaatcctg-accgttaagtttaaccctccaaaagtctatggtggagcaaccttaagagtagcccaccatagaccttattaatttt 47059297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 218 - 434
Target Start/End: Original strand, 3413526 - 3413742
Alignment:
Q  218 ttttggcttatttgatcgaatggtccctcaaataatttcaagttttcattttggtcccacaattaataaaacgtatcttttggtccctcacttttttctc 317  Q
    |||||||||||| |||||  ||||||   ||||||||||  |||||||||||||||| |||||||||||||      |||| ||||||||| |||| |||    
T  3413526 ttttggcttattagatcgtttggtcctctaaataatttcgtgttttcattttggtcctacaattaataaaaatggcgttttagtccctcaccttttactc 3413625  T
Q  318 cgtttgccaaataaatcccgaactgttaactttaactccaaatgtctatggtagaccaaccttaaaagtggtccatcgtagaccttattaattttattaa 417  Q
     |||||||||||||||||| ||||||||| ||||||| || ||||||||||| || ||| ||||| ||| ||||| | ||||| | ||||||||| | ||    
T  3413626 tgtttgccaaataaatccctaactgttaagtttaacttcagatgtctatggtggatcaatcttaagagttgtccaccatagacttcattaattttttaaa 3413725  T
Q  418 ttttaacagttcgatct 434  Q
    ||||||| ||| |||||    
T  3413726 ttttaaccgtttgatct 3413742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 250 - 413
Target Start/End: Original strand, 13562848 - 13563010
Alignment:
Q  250 taatttcaagttttcattttggtcccacaattaataaaacgtatcttttggtccctcacttttttctccgtttgccaaataaatcccgaactgttaactt 349  Q
    |||||||  ||||| ||||||||||||||| ||||||||      |||| ||||||||| |||||||| |||| |||||||||||||||  |||||||||    
T  13562848 taatttcttgtttttattttggtcccacaagtaataaaaatggcgttttagtccctcacatttttctctgtttaccaaataaatcccgat-tgttaactt 13562946  T
Q  350 taactccaaatgtctatggtagaccaaccttaaaagtggtccatcgtagaccttattaatttta 413  Q
    ||||| |||||||||||  | ||||||||||||||||||| ||| |  ||||||||||||||||    
T  13562947 taacttcaaatgtctataatggaccaaccttaaaagtggttcattgatgaccttattaatttta 13563010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 250 - 382
Target Start/End: Complemental strand, 30334727 - 30334599
Alignment:
Q  250 taatttcaagttttcattttggtcccacaattaataaaacgtatcttttggtccctcacttttttctccgtttgccaaataaatcccgaactgttaactt 349  Q
    |||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||    |  ||||||||||||||||||| || ||| ||||| |     
T  30334727 taatttcaagttttcattttagtcccacaattaataaaacgtaccttttggtccctca----tccctccgtttgccaaataaattccaaaccgttaaatc 30334632  T
Q  350 taactccaaatgtctatggtagaccaaccttaa 382  Q
    |||||| ||||||||||||  ||||||| ||||    
T  30334631 taactctaaatgtctatggaggaccaactttaa 30334599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 221 - 420
Target Start/End: Original strand, 22335976 - 22336176
Alignment:
Q  221 tggcttatttgatcgaatggtccctcaaataatttcaagttttcattttggtcccacaattaataaaacgtatcttttggtccctcacttttttctccgt 320  Q
    ||||||||| ||||   |||||||| |  |||||||  ||||||||||||||||||||||||||||||      |||| ||||||||| |||| ||| ||    
T  22335976 tggcttattagatcttttggtcccttatttaatttcgtgttttcattttggtcccacaattaataaaaatggcgttttagtccctcaccttttcctcagt 22336075  T
Q  321 ttgccaaataaatcccgaactgttaactttaactccaaatg--tctatggtagaccaaccttaaaagtggtccatcgtagaccttattaattttattaat 418  Q
    ||||||||||||||||||| |||||| |||||| |||||||   ||||||| || ||||||||||||||||||| | |||| | |||||||| | |||||    
T  22336076 ttgccaaataaatcccgaa-tgttaagtttaaccccaaatgatgctatggtggatcaaccttaaaagtggtccaccatagatcctattaattattttaat 22336174  T
Q  419 tt 420  Q
    ||    
T  22336175 tt 22336176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 222 - 335
Target Start/End: Original strand, 45454036 - 45454149
Alignment:
Q  222 ggcttatttgatcgaatggtccctcaaataatttcaagttttcattttggtcccacaattaataaaacgtatcttttggtccctcacttttttctccgtt 321  Q
    ||||||||||||  |||||||||  || |||||||| ||||||||||||||| || |||||||||||| ||  |||| |||||||||||||| |||||||    
T  45454036 ggcttatttgattaaatggtcccctaattaatttcacgttttcattttggtctcataattaataaaacatacgttttagtccctcactttttcctccgtt 45454135  T
Q  322 tgccaaataaatcc 335  Q
    ||||||||||||||    
T  45454136 tgccaaataaatcc 45454149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 238 - 392
Target Start/End: Original strand, 41078770 - 41078925
Alignment:
Q  238 tggtccctcaaataatttcaagttttcattttggtcccacaattaataaaacgtatcttttggtccctcacttttttctccgtttgccaaataaatcccg 337  Q
    ||||||||||| ||||||| | |||||||||||||||||||||| |||||| |||||||||| ||| | |  |||| |||| |||||| |||||||||||    
T  41078770 tggtccctcaattaatttccatttttcattttggtcccacaattgataaaaagtatcttttgatcctttagattttcctccatttgccgaataaatcccg 41078869  T
Q  338 aactgttaactttaactccaa--atgtctatggtagaccaaccttaaaagtggtcca 392  Q
     || |||||||||||| | ||  |||| |||||| |||||| ||||||| |||||||    
T  41078870 -acggttaactttaacccaaatgatgtatatggtggaccaatcttaaaaatggtcca 41078925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 222 - 334
Target Start/End: Original strand, 4298711 - 4298823
Alignment:
Q  222 ggcttatttgatcgaatggtccctcaaataatttcaagttttcattttggtcccacaattaataaaacgtatcttttggtccctcacttttttctccgtt 321  Q
    ||||||||||||| |||||||||  ||||||||| ||||||| |||||| ||||||||||||||||| ||   |||  |||||||||||||| ||| |||    
T  4298711 ggcttatttgatccaatggtcccctaaataattttaagtttttattttgatcccacaattaataaaatgtgggtttaagtccctcactttttcctctgtt 4298810  T
Q  322 tgccaaataaatc 334  Q
    |||||||||||||    
T  4298811 tgccaaataaatc 4298823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 250 - 420
Target Start/End: Complemental strand, 13564329 - 13564158
Alignment:
Q  250 taatttcaagttttcattttggtcccacaattaataaaacgtatcttttggtccctcacttttttctccgtttgccaaataaatcccgaactgttaactt 349  Q
    |||||||  |||||||||||||||||||||||||||||||     |||| ||||||||| |||| ||||||||||||||||||||||||   ||||| ||    
T  13564329 taatttcttgttttcattttggtcccacaattaataaaactggcgttttagtccctcacattttcctccgtttgccaaataaatcccga--cgttaagtt 13564232  T
Q  350 taactcca---aatgtctatggtagaccaaccttaaaagtggtccatcgtagaccttattaattttattaattt 420  Q
    |||| |||   |||||||||||| || || |||||| ||||||||| | |||| | |||||||| | |||||||    
T  13564231 taaccccaaataatgtctatggtggatcatccttaagagtggtccaccatagatcctattaattattttaattt 13564158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 220 - 335
Target Start/End: Complemental strand, 30311589 - 30311474
Alignment:
Q  220 ttggcttatttgatcgaatggtccctcaaataatttcaagttttcattttggtcccacaattaataaaacgtatcttttggtccctcacttttttctccg 319  Q
    ||||||||||||||| | | |||||  |||||||||||| |||||||||||||||||||||||||||||| ||  |||  |||||||| ||||||||| |    
T  30311589 ttggcttatttgatccattagtcccctaaataatttcaaattttcattttggtcccacaattaataaaacatacgtttaagtccctcatttttttctctg 30311490  T
Q  320 tttgccaaataaatcc 335  Q
    || ||||| |||||||    
T  30311489 ttagccaattaaatcc 30311474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 222 - 391
Target Start/End: Complemental strand, 33779202 - 33779036
Alignment:
Q  222 ggcttatttgatcgaatggtccctcaaataatttcaagttttcattttggtcccacaattaataaaacgtatcttttggtccctcacttttttctccgtt 321  Q
    ||||||||||||| | | |||||  ||||||||||||||||||||||||| |||||||||||||||||  |  |||| ||||||| |||||| |||||      
T  33779202 ggcttatttgatccattagtcccctaaataatttcaagttttcattttggccccacaattaataaaactcacgttttagtccctcgctttttcctccg-- 33779105  T
Q  322 tgccaaataaatcccgaactgttaactttaactccaaatgtctatggtagaccaaccttaaaagtggtcc 391  Q
      || ||||||||     ||||||| ||||||  |||||||||||||| |||||||||||| ||||||||    
T  33779104 -ccccaataaatctttggctgttaagtttaaccacaaatgtctatggtggaccaaccttaagagtggtcc 33779036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 250 - 412
Target Start/End: Complemental strand, 9662326 - 9662165
Alignment:
Q  250 taatttcaagttttcattttggtcccacaattaataaaacgtatcttttggtccctcacttttttctccgtttgccaaataaatcccgaactgttaactt 349  Q
    ||||||||||||||||| || || ||| || ||| |||||  || |||||||||||||| ||| |||||||  | ||||||||||| || ||||||| ||    
T  9662326 taatttcaagttttcatcttagttccataactaaaaaaactcatgttttggtccctcacgtttgtctccgtcggtcaaataaatccaga-ctgttaaatt 9662228  T
Q  350 taactccaaatgtctatggtagaccaaccttaaaagtggtccatcgtagaccttattaatttt 412  Q
    ||||| |||||||||||||| ||||||| ||| |  | ||||| | |||||||||||||||||    
T  9662227 taacttcaaatgtctatggtggaccaacattatagatagtccaccatagaccttattaatttt 9662165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 246 - 424
Target Start/End: Complemental strand, 24283069 - 24282892
Alignment:
Q  246 caaataatttcaagttttcattttggtcccacaattaataaaacgtatcttttggtccctcacttttttctccgtttgccaaataaatcccgaactgtta 345  Q
    ||||||||||||  ||||||||||||| |||||||||| |||  |   |||| | |||||||| |||| |||||||||||||||||||||     |||||    
T  24283069 caaataatttcagattttcattttggttccacaattaaaaaacaggcgctttag-tccctcacattttcctccgtttgccaaataaatccatgggtgtta 24282971  T
Q  346 actttaactccaaatgtctatggtagaccaaccttaaaagtggtccatcgtagaccttattaattttattaattttaac 424  Q
    |||||||| ||||||||||||||| || |||| ||| |  |||||| ||||| || |||| |||||| |||||||||||    
T  24282970 actttaaccccaaatgtctatggtggatcaacattatagatggtccgtcgtaaactttatcaattttgttaattttaac 24282892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 222 - 278
Target Start/End: Original strand, 40811338 - 40811394
Alignment:
Q  222 ggcttatttgatcgaatggtccctcaaataatttcaagttttcattttggtcccaca 278  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  40811338 ggcttatttgatccaatggtccctcaaataatttcaagttttcattttggtcccaca 40811394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 92 - 158
Target Start/End: Original strand, 5373510 - 5373576
Alignment:
Q  92 ctgttgtagagacgacggtgtaaactgtggcgagcaacagagggagggaaagtgagagttagggtga 158  Q
    ||||||||||||||||||||||||| | ||||||| || ||||||||||||||||||||||||||||    
T  5373510 ctgttgtagagacgacggtgtaaacggcggcgagcgacggagggagggaaagtgagagttagggtga 5373576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 225 - 361
Target Start/End: Original strand, 46835676 - 46835810
Alignment:
Q  225 ttatttgatcgaatggtccctcaaataatttcaagttttcattttggtcccacaattaataaaacgtatcttttggtccctcacttttttctccgtttgc 324  Q
    |||| ||||| |||||||||| |||||||||||| ||||| |||| |||| ||||||||||||| |||| |||  ||| |||| ||||| ||| |||||     
T  46835676 ttatatgatccaatggtcccttaaataatttcaaattttctttttagtcctacaattaataaaatgtatttttaagtctctcaatttttcctctgtttgt 46835775  T
Q  325 caaataaatcccgaactgttaactttaactccaaatg 361  Q
    |||||||||| ||||  ||||| |||||| |||||||    
T  46835776 caaataaatctcgaa--gttaagtttaaccccaaatg 46835810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 248 - 334
Target Start/End: Original strand, 11344531 - 11344614
Alignment:
Q  248 aataatttcaagttttcattttggtcccacaattaataaaacgtatcttttggtccctcacttttttctccgtttgccaaataaatc 334  Q
    |||||||||||||||||||||||||||||||||||||||||||||  |||  |||| |||   ||||||||||||| ||||||||||    
T  11344531 aataatttcaagttttcattttggtcccacaattaataaaacgtacgtttaagtccttca---ttttctccgtttgtcaaataaatc 11344614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 222 - 392
Target Start/End: Complemental strand, 11502540 - 11502368
Alignment:
Q  222 ggcttatttgatcgaatggtccctcaaataatttcaagttttcattttggtcccacaattaataaaacgtatcttttggtccctcacttttttctccgtt 321  Q
    |||||||| |||||  |||||| | || |||||||| |||||||||||| ||||||| |||||||||  |     || ||||||||  |||| ||| |||    
T  11502540 ggcttattagatcgtttggtcctttaactaatttcatgttttcattttgatcccacatttaataaaaattgcgaattagtccctcaacttttgctctgtt 11502441  T
Q  322 tgccaaataaatcccgaactgttaactttaactccaaatg---tctatggtagaccaaccttaaaagtggtcca 392  Q
    ||||||||||||||| ||| ||||| ||||||  ||||||   ||||||||||||||||||||| |||||||||    
T  11502440 tgccaaataaatccc-aacagttaagtttaacctcaaatgatgtctatggtagaccaaccttaagagtggtcca 11502368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 343 - 421
Target Start/End: Complemental strand, 44554764 - 44554687
Alignment:
Q  343 ttaactttaactccaaatgtctatggtagaccaaccttaaaagtggtccatcgtagaccttattaattttattaatttt 421  Q
    ||||||||||||||||||||||||||| ||||||| ||| || ||||||| |||||| |||||||||||| ||||||||    
T  44554764 ttaactttaactccaaatgtctatggtggaccaacattataa-tggtccaccgtagatcttattaattttgttaatttt 44554687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 248 - 410
Target Start/End: Original strand, 46201155 - 46201317
Alignment:
Q  248 aataatttcaagttttcattttggtcccacaattaataaaacgtatcttttggtccctcacttttttctccgtttgccaaataaatcccgaactgttaac 347  Q
    ||||||||  ||||||||||||||||||| || |||||||||  || ||||| ||| | | || | | |||||  |||||||||||||    |||||||     
T  46201155 aataattttcagttttcattttggtcccataagtaataaaactcatgttttgatcctttaattgtgtttccgtcggccaaataaatccaagcctgttaag 46201254  T
Q  348 tttaactccaaatgtctatggtagaccaaccttaaaagtggtccatcgtagaccttattaatt 410  Q
    |||||| |||||||||||||||  ||||||||||| ||||||||| | |||| | ||||||||    
T  46201255 tttaaccccaaatgtctatggtgaaccaaccttaagagtggtccaccatagatcatattaatt 46201317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 217 - 335
Target Start/End: Complemental strand, 40738962 - 40738843
Alignment:
Q  217 attttggcttatttgatcgaatggtccctcaaataatttcaagttttcattttggtcccacaattaat-aaaacgtatcttttggtccctcacttttttc 315  Q
    ||||||||||||| |||||  |||||||  ||| ||||||| ||||| |||||||||||| ||||||| |||||     |||| |||||||||||||| |    
T  40738962 attttggcttattagatcgtttggtcccctaaacaatttcatgtttttattttggtcccataattaataaaaacaggcgttttagtccctcactttttgc 40738863  T
Q  316 tccgtttgccaaataaatcc 335  Q
    || |||||||||||||||||    
T  40738862 tctgtttgccaaataaatcc 40738843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 342 - 420
Target Start/End: Original strand, 2414863 - 2414941
Alignment:
Q  342 gttaactttaactccaaatgtctatggtagaccaaccttaaaagtggtccatcgtagaccttattaattttattaattt 420  Q
    |||||||||||| ||||||||||||  | |||||||||||||||||||||| | |||| | |||||||||| |||||||    
T  2414863 gttaactttaaccccaaatgtctataatggaccaaccttaaaagtggtccaccatagatcctattaattttcttaattt 2414941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 247 - 336
Target Start/End: Original strand, 24281097 - 24281187
Alignment:
Q  247 aaataatttcaagttttcattttggtcccacaattaataaaacgtatc-ttttggtccctcacttttttctccgtttgccaaataaatccc 336  Q
    ||||||||||| ||||| ||||||||||||||||||||||||   | | |||| |||||||| |||||| |||||| ||||||||||||||    
T  24281097 aaataatttcatgtttttattttggtcccacaattaataaaaacaagcgttttagtccctcaattttttatccgttcgccaaataaatccc 24281187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 247 - 335
Target Start/End: Complemental strand, 3414927 - 3414839
Alignment:
Q  247 aaataatttcaagttttcattttggtcccacaattaataaaacgtatcttttggtccctcacttttttctccgtttgccaaataaatcc 335  Q
    ||||||||||| |||||||||||||||||| |||||||||||      |||| |||| ||||||||| |||| ||||||||||||||||    
T  3414927 aaataatttcatgttttcattttggtcccataattaataaaaatggcgttttagtccttcactttttcctccatttgccaaataaatcc 3414839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 222 - 334
Target Start/End: Complemental strand, 35664399 - 35664287
Alignment:
Q  222 ggcttatttgatcgaatggtccctcaaataatttcaagttttcattttggtcccacaattaataaaacgtatcttttggtccctcacttttttctccgtt 321  Q
    |||||||| |||| | || ||||| || ||||||| | ||||||||||| ||||| || ||||||||  || |||||||||||| | |||| ||||||||    
T  35664399 ggcttattagatccattgatcccttaattaatttccatttttcattttgatcccataagtaataaaaaataccttttggtcccttagttttatctccgtt 35664300  T
Q  322 tgccaaataaatc 334  Q
    ||||||| |||||    
T  35664299 tgccaaaaaaatc 35664287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 250 - 361
Target Start/End: Original strand, 25533214 - 25533325
Alignment:
Q  250 taatttcaagttttcattttggtcccacaattaataaaacgtatcttttggtccctcacttttttctccgtttgccaaataaatcccgaactgttaactt 349  Q
    ||||||||||||||||||||||||||| || ||||||||   || ||||||||| ||| || | |||||||  | |||||||||| |  |||||||| ||    
T  25533214 taatttcaagttttcattttggtcccataactaataaaattcatgttttggtccttcaattgtatctccgtcggtcaaataaatctctgactgttaagtt 25533313  T
Q  350 taactccaaatg 361  Q
    |||| |||||||    
T  25533314 taaccccaaatg 25533325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 260 - 353
Target Start/End: Original strand, 22537595 - 22537686
Alignment:
Q  260 ttttcattttggtcccacaattaataaaacgtatcttttggtccctcacttttttctccgtttgccaaataaatcccgaactgttaactttaac 353  Q
    ||||||||||||||||||||||| |||||   |  ||||| |||||||| ||| |||| |||||||||||||||||  ||||||||| ||||||    
T  22537595 ttttcattttggtcccacaattactaaaaatgacattttgatccctcacgtttgtctctgtttgccaaataaatcc--aactgttaattttaac 22537686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 342 - 436
Target Start/End: Original strand, 35295817 - 35295911
Alignment:
Q  342 gttaactttaactccaaatgtctatggtagaccaaccttaaaagtggtccatcgtagaccttattaattttattaattttaacagttcgatctat 436  Q
    |||||||||||| |||||| ||| |||| |||||||||||| ||||||||| | |||| | |||||||| | ||||||| ||| ||| |||||||    
T  35295817 gttaactttaaccccaaatatctgtggtggaccaaccttaagagtggtccaccatagatcctattaattattttaatttaaaccgtttgatctat 35295911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 343 - 408
Target Start/End: Original strand, 7354623 - 7354688
Alignment:
Q  343 ttaactttaactccaaatgtctatggtagaccaaccttaaaagtggtccatcgtagaccttattaa 408  Q
    |||||||||||  |||||||||| | | ||||||| ||| ||||||||||||||||||||||||||    
T  7354623 ttaactttaaccacaaatgtctaagatggaccaacattataagtggtccatcgtagaccttattaa 7354688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 241 - 305
Target Start/End: Original strand, 38539688 - 38539752
Alignment:
Q  241 tccctcaaataatttcaagttttcattttggtcccacaattaataaaacgtatcttttggtccct 305  Q
    ||||| || ||||||||||||||||||||||||||| || |||||||||  || |||||||||||    
T  38539688 tcccttaattaatttcaagttttcattttggtcccataaataataaaactcatgttttggtccct 38539752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 364 - 434
Target Start/End: Original strand, 22691109 - 22691179
Alignment:
Q  364 tatggtagaccaaccttaaaagtggtccatcgtagaccttattaattttattaattttaacagttcgatct 434  Q
    |||| |||||||| ||||| |||||||||||||| ||||||| |||||| || |||||||| ||| |||||    
T  22691109 tatgatagaccaatcttaagagtggtccatcgtataccttataaattttgtttattttaaccgtttgatct 22691179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 333 - 434
Target Start/End: Complemental strand, 669395 - 669295
Alignment:
Q  333 tcccgaactgttaactttaactccaaatgtctatggtagaccaaccttaaaagtggtccatcgtagaccttattaattttattaattttaacagttcgat 432  Q
    |||| ||| ||||||||||||  |||||||||||||| |||| | ||||| ||||||||| | |||| | |||||||||| ||||||| ||| ||| |||    
T  669395 tccctaaccgttaactttaacctcaaatgtctatggtggacc-atcttaagagtggtccaccatagatcctattaattttgttaatttaaaccgtttgat 669297  T
Q  433 ct 434  Q
    ||    
T  669296 ct 669295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 339 - 387
Target Start/End: Original strand, 15992250 - 15992298
Alignment:
Q  339 actgttaactttaactccaaatgtctatggtagaccaaccttaaaagtg 387  Q
    |||||||||||||||  |||||||||||||| |||||||||||| ||||    
T  15992250 actgttaactttaacctcaaatgtctatggtggaccaaccttaagagtg 15992298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 340 - 424
Target Start/End: Original strand, 16755987 - 16756071
Alignment:
Q  340 ctgttaactttaactccaaatgtctatggtagaccaaccttaaaagtggtccatcgtagaccttattaattttattaattttaac 424  Q
    ||||||||||||||  ||||||||||||||  | ||||||||||||| ||| | | |||| | |||||||| | |||||||||||    
T  16755987 ctgttaactttaacctcaaatgtctatggtgaaacaaccttaaaagttgtctaccatagatcctattaattattttaattttaac 16756071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 338 - 392
Target Start/End: Original strand, 39981430 - 39981485
Alignment:
Q  338 aactgttaactttaactcc-aaatgtctatggtagaccaaccttaaaagtggtcca 392  Q
    |||||||||||||||| || ||||||||||||| ||||||| |||||| |||||||    
T  39981430 aactgttaactttaacccccaaatgtctatggtggaccaactttaaaaatggtcca 39981485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 342 - 392
Target Start/End: Original strand, 43441464 - 43441514
Alignment:
Q  342 gttaactttaactccaaatgtctatggtagaccaaccttaaaagtggtcca 392  Q
    |||||||||||| | |||||||||||||  ||||||||||| |||||||||    
T  43441464 gttaactttaaccctaaatgtctatggtgtaccaaccttaagagtggtcca 43441514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 338 - 410
Target Start/End: Original strand, 41328332 - 41328405
Alignment:
Q  338 aactgttaactttaactcc-aaatgtctatggtagaccaaccttaaaagtggtccatcgtagaccttattaatt 410  Q
    |||||||||||||||| || ||||||||||||| || |||| |||||| ||||||| | |||| | ||||||||    
T  41328332 aactgttaactttaacccccaaatgtctatggtggaacaactttaaaaatggtccaccatagatcctattaatt 41328405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 236 - 273
Target Start/End: Original strand, 44372741 - 44372778
Alignment:
Q  236 aatggtccctcaaataatttcaagttttcattttggtc 273  Q
    ||||||||||||| ||||||| ||||||||||||||||    
T  44372741 aatggtccctcaactaatttcgagttttcattttggtc 44372778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 236 - 273
Target Start/End: Original strand, 44381597 - 44381634
Alignment:
Q  236 aatggtccctcaaataatttcaagttttcattttggtc 273  Q
    ||||||||||||| ||||||| ||||||||||||||||    
T  44381597 aatggtccctcaactaatttcgagttttcattttggtc 44381634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 236 - 276
Target Start/End: Original strand, 9081405 - 9081445
Alignment:
Q  236 aatggtccctcaaataatttcaagttttcattttggtccca 276  Q
    ||||||||||||| |||||||  ||||||||||||||||||    
T  9081405 aatggtccctcaactaatttccggttttcattttggtccca 9081445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 301 - 434
Target Start/End: Original strand, 40811397 - 40811531
Alignment:
Q  301 tccctcacttttttctccgtttgccaaataaatcccgaactgttaactttaactccaa--atgtctatggtagaccaaccttaaaagtggtccatcgtag 398  Q
    |||||||  |||| |||||| | | |||||||||| || | |||||||||||| | ||  ||||||||||| |||||||||||| ||||||||| | |||    
T  40811397 tccctcatattttcctccgtatactaaataaatcctga-cggttaactttaacccaaatgatgtctatggtggaccaaccttaagagtggtccaccatag 40811495  T
Q  399 accttattaattttattaattttaacagttcgatct 434  Q
    |   ||||||| || ||||||| ||| ||| |||||    
T  40811496 attctattaatatttttaatttaaaccgtttgatct 40811531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 136; Significance: 1e-70; HSPs: 2)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 136; E-Value: 1e-70
Query Start/End: Original strand, 222 - 445
Target Start/End: Complemental strand, 109863 - 109641
Alignment:
Q  222 ggcttatttgatcgaatggtccctcaaataatttcaagttttcattttggtcccacaattaataaaacgtatcttttggtccctcacttttttctccgtt 321  Q
    ||||||||||||  |||||||||| |||||||||||||||||||||||||||| |||||||||||||||||  |||| ||||||||||||||||||  ||    
T  109863 ggcttatttgattcaatggtcccttaaataatttcaagttttcattttggtcctacaattaataaaacgtacattttagtccctcacttttttctcaatt 109764  T
Q  322 tgccaaataaatcccgaactgttaactttaactccaaatgtctatggtagaccaaccttaaaagtggtccatcgtagaccttattaattttattaatttt 421  Q
    |||||||| |||||| |||| |||||||||||| ||||||| |||||| |||||||||||||| | ||||||||||||||||||||||||| ||||||||    
T  109763 tgccaaatgaatccc-aactattaactttaacttcaaatgtatatggtggaccaaccttaaaaatagtccatcgtagaccttattaattttgttaatttt 109665  T
Q  422 aacagttcgatctatttatcataa 445  Q
    |||  || ||||||||||||||||    
T  109664 aaccatttgatctatttatcataa 109641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 250 - 335
Target Start/End: Original strand, 108539 - 108624
Alignment:
Q  250 taatttcaagttttcattttggtcccacaattaataaaacgtatcttttggtccctcacttttttctccgtttgccaaataaatcc 335  Q
    ||||||| | ||| ||||||| ||||| |||||||||||||||  ||||| ||||||| ||||| |||| ||||||||||||||||    
T  108539 taatttccattttacattttgatcccataattaataaaacgtacgttttgatccctcattttttcctccatttgccaaataaatcc 108624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 128; Significance: 7e-66; HSPs: 70)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 128; E-Value: 7e-66
Query Start/End: Original strand, 222 - 459
Target Start/End: Original strand, 40244185 - 40244421
Alignment:
Q  222 ggcttatttgatcgaatggtccctcaaataatttcaagttttcattttggtcccacaattaataaaacgtatcttttggtccctcacttttttctccgtt 321  Q
    ||||||||||||| | |||||||| ||||||||||||||||||||||||||| ||||||||||||||||||  |||||||||||||  |||| |||||||    
T  40244185 ggcttatttgatccattggtcccttaaataatttcaagttttcattttggtctcacaattaataaaacgtacattttggtccctcaaattttcctccgtt 40244284  T
Q  322 tgccaaataaatcccgaactgttaactttaactccaaatgtctatggtagaccaaccttaaaagtggtccatcgtagaccttattaattttattaatttt 421  Q
    |||||||||| |     || ||||||||||||| ||| |||||||||| |||||| ||||||||||||||||||||||||||||||||||| ||||||||    
T  40244285 tgccaaataattttg--acagttaactttaacttcaagtgtctatggtggaccaaacttaaaagtggtccatcgtagaccttattaattttgttaatttt 40244382  T
Q  422 aacagttcgatctatttatcataata-ggaccgttagat 459  Q
    |||  || |||||||||||||||| | ||||||||||||    
T  40244383 aactctttgatctatttatcataaaatggaccgttagat 40244421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 122; E-Value: 3e-62
Query Start/End: Original strand, 220 - 445
Target Start/End: Original strand, 34818082 - 34818306
Alignment:
Q  220 ttggcttatttgatcgaatggtccctcaaataatttcaagttttcattttggtcccacaattaataaaacgtatcttttggtccctcacttttttctccg 319  Q
    ||||||||||||||  ||||||||   || ||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||  |||| ||||     
T  34818082 ttggcttatttgattcaatggtcctctaattaatttcaagttttcattttggtcccacaattaataaaacgtatgatttggtccctcagattttcctcca 34818181  T
Q  320 tttgccaaataaatcccgaactgttaactttaactccaaatgtctatggtagaccaaccttaaaagtggtccatcgtagaccttattaattttattaatt 419  Q
    ||||||||||||||||| ||  |||||||||||||  ||||||||||||| || ||||||||||| || || ||| ||||||||||||||||| ||||||    
T  34818182 tttgccaaataaatccc-aatagttaactttaactttaaatgtctatggttgatcaaccttaaaaatgatctatcatagaccttattaattttgttaatt 34818280  T
Q  420 ttaacagttcgatctatttatcataa 445  Q
    ||||| ||||||||||||||||||||    
T  34818281 ttaaccgttcgatctatttatcataa 34818306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 116; E-Value: 1e-58
Query Start/End: Original strand, 222 - 445
Target Start/End: Original strand, 38240904 - 38241125
Alignment:
Q  222 ggcttatttgatcgaatggtccctcaaataatttcaagttttcattttggtcccacaattaataaaacgtatcttttggtccctcacttttttctccgtt 321  Q
    ||||||||||||| | ||||||||  ||||||||||| |||| ||||||||||||||||||||||||||||  |||  |||| |||  |||| |||||||    
T  38240904 ggcttatttgatccattggtcccttgaataatttcaaatttttattttggtcccacaattaataaaacgtacgtttaagtccttcagattttcctccgtt 38241003  T
Q  322 tgccaaataaatcccgaactgttaactttaactccaaatgtctatggtagaccaaccttaaaagtggtccatcgtagaccttattaattttattaatttt 421  Q
    ||||||||||||||||  ||||||| ||||||||||||||||||||||  ||||| ||||||| |||||||||||||| |||||||||||| ||||||||    
T  38241004 tgccaaataaatcccg-gctgttaagtttaactccaaatgtctatggtgaaccaa-cttaaaaatggtccatcgtagagcttattaattttgttaatttt 38241101  T
Q  422 aacagttcgatctatttatcataa 445  Q
    |||  |||||||||||||||||||    
T  38241102 aaccattcgatctatttatcataa 38241125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 111; E-Value: 1e-55
Query Start/End: Original strand, 250 - 459
Target Start/End: Original strand, 27837946 - 27838154
Alignment:
Q  250 taatttcaagttttcattttggtcccacaattaataaaacgtatcttttggtccctcacttttttctccgtttgccaaataaatcccgaactgttaactt 349  Q
    |||||||| |||||||||||||||||||||||||||||       |||| ||||||||| |||| ||||||||||||||||||||| || ||||||||||    
T  27837946 taatttcatgttttcattttggtcccacaattaataaatatggcgttttagtccctcaccttttcctccgtttgccaaataaatcctga-ctgttaactt 27838044  T
Q  350 taactccaaatgtctatggtagaccaaccttaaaagtggtccatcgtagaccttattaattttattaattttaacagttcgatctatttatcataata-g 448  Q
     |||| |||||||||||||||||||||  |||||||||||||||||||||||||||||||||| |||||||||||  ||||||||||||||||||| | |    
T  27838045 -aacttcaaatgtctatggtagaccaattttaaaagtggtccatcgtagaccttattaattttgttaattttaactattcgatctatttatcataaaatg 27838143  T
Q  449 gaccgttagat 459  Q
    |||||||||||    
T  27838144 gaccgttagat 27838154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 101; E-Value: 9e-50
Query Start/End: Original strand, 215 - 392
Target Start/End: Complemental strand, 38242641 - 38242463
Alignment:
Q  215 ttattttggcttatttgatcgaatggtccctcaaataatttcaagttttcattttggtcccacaattaataaaacgtatcttttggtccctcactttttt 314  Q
    |||||| ||||||||||||  || |||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||    
T  38242641 ttatttaggcttatttgattcaaaggtccctcaaataatttcaagttttcattttgatcccacaattaataaaacgtaccttttggtccctcactttttt 38242542  T
Q  315 ctccgtttgccaaataaatcccgaactgttaactttaactccaa--atgtctatggtagaccaaccttaaaagtggtcca 392  Q
     || ||||||||||||||| ||  || ||||| |||||||| ||  ||||||||||| |||||||||||| |||||||||    
T  38242541 atctgtttgccaaataaat-cctcacagttaagtttaactcaaatgatgtctatggtggaccaaccttaagagtggtcca 38242463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 222 - 424
Target Start/End: Original strand, 18197145 - 18197339
Alignment:
Q  222 ggcttatttgatcgaatggtccctcaaataatttcaagttttcattttggtcccacaattaataaaacgtatcttttggtccctcacttttttctccgtt 321  Q
    ||||||||||||| ||  ||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||| ||||| |||||||    
T  18197145 ggcttatttgatccaaatgtccctcaaataatttcaaattttcattttggtcccacaattaataaaacgtaccttttggtccctcattttttcctccgtt 18197244  T
Q  322 tgccaaataaatcccgaactgttaactttaactcc-aaatgtctatggtagaccaaccttaaaagtggtccatcgtagaccttattaattttattaattt 420  Q
    |||||||||||||| | || ||||||||||||||| |||  ||||||||  |||||||||        |||||| ||||||||||||||||| |||||||    
T  18197245 tgccaaataaatccag-accgttaactttaactccaaaacatctatggtgaaccaacctt--------tccatcatagaccttattaattttgttaattt 18197335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 222 - 412
Target Start/End: Complemental strand, 53624479 - 53624290
Alignment:
Q  222 ggcttatttgatcgaatggtccctcaaataatttcaagttttcattttggtcccacaattaataaaacgtatcttttggtccctcacttttttctccgtt 321  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||| || ||||||||||||||||||  |||||||| |||||||||||||| |||    
T  53624479 ggcttatttgatccaatggtccctcaaataatttcaagttttcattttgatctcacaattaataaaacgtacattttggtcactcacttttttctcggtt 53624380  T
Q  322 tgccaaataaatcccgaactgttaactttaactccaaatgtctatggtagaccaaccttaaaagtggtccatcgtagaccttattaatttt 412  Q
    |||||||||||||| | || ||||  |||||| |||||||| |||||| ||||||| ||| |  | ||||| | |||||||||||||||||    
T  53624379 tgccaaataaatccag-acggttaggtttaaccccaaatgtatatggtggaccaacattatagatagtccaccatagaccttattaatttt 53624290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 259 - 423
Target Start/End: Original strand, 10730920 - 10731083
Alignment:
Q  259 gttttcattttggtcccacaattaataaaacgtatcttttggtccctcacttttttctccgtttgccaaataaatcccgaactgttaactttaactccaa 358  Q
    |||||||||||||||||| |||||||||||      ||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||| |||    
T  10730920 gttttcattttggtcccataattaataaaaatggcattttggtccttcacttttttctccgtttgccaaataaatcccga-ctgttaactttaacttcaa 10731018  T
Q  359 atgtctatggtagaccaaccttaaaagtggtccatcgtagaccttattaattttattaattttaa 423  Q
    |||||||||||  ||||||||||||||||||| ||| || |||||||||||||| ||||||||||    
T  10731019 atgtctatggtgaaccaaccttaaaagtggtctatcatataccttattaattttgttaattttaa 10731083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 250 - 445
Target Start/End: Complemental strand, 35372248 - 35372055
Alignment:
Q  250 taatttcaagttttcattttggtcccacaattaataaaacgtatcttttggtccctcacttttttctccgtttgccaaataaatcccgaactgttaactt 349  Q
    |||||||| ||||||||||||||| ||||||||||||||      |||| ||||||||| |||| ||| |||||||||||||||||  | ||||||||||    
T  35372248 taatttcatgttttcattttggtctcacaattaataaaaatggcgttttagtccctcaccttttcctctgtttgccaaataaatcctta-ctgttaactt 35372150  T
Q  350 taactccaaatgtctatggtagaccaaccttaaaagtggtccatcgtagaccttattaattttattaattttaacagttcgatctatttatcataa 445  Q
     |||| |||||||||||| | ||||||  |||||||||||||||||||||||||||||||||| |||||||||||  |||||||||||||||||||    
T  35372149 -aacttcaaatgtctatgttggaccaattttaaaagtggtccatcgtagaccttattaattttgttaattttaaccattcgatctatttatcataa 35372055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 222 - 445
Target Start/End: Original strand, 41263636 - 41263858
Alignment:
Q  222 ggcttatttgatcgaatggtccctcaaataatttcaagttttcattttggtcccacaattaataaaacgtatcttttggtccctcacttttttctccgtt 321  Q
    |||||||| |||||  |||||||| |  ||||||||  ||||||||||||||||||| ||| |||||      ||||||||| |||  ||||||||||||    
T  41263636 ggcttattagatcgtttggtcccttatttaatttcatattttcattttggtcccacatttattaaaaatggcattttggtccgtcatctttttctccgtt 41263735  T
Q  322 tgccaaataaatcccgaactgttaactttaactccaaatgtctatggtagaccaaccttaaaagtggtccatcgtagaccttattaattttattaatttt 421  Q
    || ||| |||||||| || ||||||||||||||| |||| |||||||| || ||||||||||||||||| ||  ||||||||||||||||| ||||||||    
T  41263736 tgtcaattaaatccc-aagtgttaactttaactctaaatatctatggtggatcaaccttaaaagtggtctattctagaccttattaattttgttaatttt 41263834  T
Q  422 aacagttcgatctatttatcataa 445  Q
    |||  |||||||||||||||||||    
T  41263835 aaccattcgatctatttatcataa 41263858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 218 - 434
Target Start/End: Original strand, 53420313 - 53420527
Alignment:
Q  218 ttttggcttatttgatcgaatggtccctcaaataatttcaagttttcattttggtcccacaattaataaaacgtatcttttggtccctcacttttttctc 317  Q
    |||||||||||||||||   |||||||  || ||||||||  ||||||||||||||| |||||||||||||||||  |||||||||||||||||||||||    
T  53420313 ttttggcttatttgatc---tggtcccctaactaatttcatattttcattttggtcctacaattaataaaacgtacgttttggtccctcacttttttctc 53420409  T
Q  318 cgtttgccaaataaatcccga-actgttaactttaactccaaatgtctatggtagaccaaccttaaaagtggtccatcgtagaccttattaattttatta 416  Q
    |||||  |||||||||||| |  || |||| ||||||  |||||||||||||| ||||||| ||||||||| |||| | |||||||||||||  || |||    
T  53420410 cgtttatcaaataaatccctagtctattaagtttaaccacaaatgtctatggtggaccaactttaaaagtgatccaccatagaccttattaaacttttta 53420509  T
Q  417 attttaacagttcgatct 434  Q
    |||| ||| ||| |||||    
T  53420510 atttaaactgtttgatct 53420527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 220 - 406
Target Start/End: Complemental strand, 12108103 - 12107912
Alignment:
Q  220 ttggcttatttgatcgaatggtccctcaaataatttcaagttttcattttggtcccacaattaataaaacgtatcttttggtccctcacttttttctccg 319  Q
    ||||||||||||||  ||| |||||| ||||||||||||||||||||||||||||||||| ||||||||| ||| ||||||||||||||||||| |||||    
T  12108103 ttggcttatttgattcaatagtcccttaaataatttcaagttttcattttggtcccacaactaataaaacatatattttggtccctcactttttcctccg 12108004  T
Q  320 tttgccaa---ataaatcccgaactgttaactttaactccaaatg---tctatggtagaccaaccttaaaagtggtccatcgtagaccttatt 406  Q
    ||||||||   ||||||| ||   |||||| |||||| |||||||   | |||||| |||||||||||||||||||||| | |||||| ||||    
T  12108003 tttgccaaataataaatcacg-ggtgttaaatttaaccccaaatgatatttatggtggaccaaccttaaaagtggtccaccatagaccctatt 12107912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 238 - 366
Target Start/End: Original strand, 50809435 - 50809563
Alignment:
Q  238 tggtccctcaaataatttcaagttttcattttggtcccacaattaataaaacgtatcttttggtccctcacttttttctccgtttgccaaataaatcccg 337  Q
    |||||||| |||||||||||| ||||||||||||||||| ||||||||||||  |  |||| |||||||||||||| |||||||||||||||||||| |     
T  50809435 tggtcccttaaataatttcaatttttcattttggtcccataattaataaaacacacgttttagtccctcactttttcctccgtttgccaaataaatctca 50809534  T
Q  338 aactgttaactttaactccaaatgtctat 366  Q
    |||||| ||||||||||| ||||||||||    
T  50809535 aactgtcaactttaactctaaatgtctat 50809563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 238 - 366
Target Start/End: Complemental strand, 50810936 - 50810808
Alignment:
Q  238 tggtccctcaaataatttcaagttttcattttggtcccacaattaataaaacgtatcttttggtccctcacttttttctccgtttgccaaataaatcccg 337  Q
    |||||||| |||||||||||| ||||||||||||||||| ||||||||||||  |  |||| |||||||| ||||| |||||||||||||||||||| |     
T  50810936 tggtcccttaaataatttcaatttttcattttggtcccataattaataaaacacacgttttagtccctcattttttcctccgtttgccaaataaatctca 50810837  T
Q  338 aactgttaactttaactccaaatgtctat 366  Q
    |||||||||||||||||| ||||||||||    
T  50810836 aactgttaactttaactctaaatgtctat 50810808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 238 - 366
Target Start/End: Original strand, 50864928 - 50865056
Alignment:
Q  238 tggtccctcaaataatttcaagttttcattttggtcccacaattaataaaacgtatcttttggtccctcacttttttctccgtttgccaaataaatcccg 337  Q
    |||||||| |||||||||||| ||||||||||||||||| ||||||||||||  |  |||| |||||||| ||||| |||||||||||||||||||| |     
T  50864928 tggtcccttaaataatttcaatttttcattttggtcccataattaataaaacacacgttttagtccctcattttttcctccgtttgccaaataaatctca 50865027  T
Q  338 aactgttaactttaactccaaatgtctat 366  Q
    |||||||||||||||||| ||||||||||    
T  50865028 aactgttaactttaactctaaatgtctat 50865056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 238 - 366
Target Start/End: Complemental strand, 50866427 - 50866299
Alignment:
Q  238 tggtccctcaaataatttcaagttttcattttggtcccacaattaataaaacgtatcttttggtccctcacttttttctccgtttgccaaataaatcccg 337  Q
    |||||||| |||||||||||| ||||||||||||||||| ||||||||||||  |  |||| |||||||||||||| |||||||||||||||||||| |     
T  50866427 tggtcccttaaataatttcaatttttcattttggtcccataattaataaaacacacgttttagtccctcactttttcctccgtttgccaaataaatctca 50866328  T
Q  338 aactgttaactttaactccaaatgtctat 366  Q
    |||||| ||||||||||| ||||||||||    
T  50866327 aactgtcaactttaactctaaatgtctat 50866299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 222 - 458
Target Start/End: Complemental strand, 26887673 - 26887437
Alignment:
Q  222 ggcttatttgatcgaatggtccctcaaataatttcaagttttcattttggtcccacaattaataaaacgtatcttttggtccctcacttttttctccgtt 321  Q
    |||||||| |||||  |||||||| |  |||||||| ||||||||||| ||||||||||||||||||       ||| ||||||||  |||| ||| |||    
T  26887673 ggcttattagatcgtttggtcccttatttaatttcatgttttcatttttgtcccacaattaataaaaatggcaatttagtccctcatcttttcctctgtt 26887574  T
Q  322 tgccaaataaatcccgaactgttaactttaactccaaatgtctatggtagaccaaccttaaaagtggtccatcgtagaccttattaattttattaatttt 421  Q
    | |||||||||| | || | ||||||||||||| ||||| ||||||||  ||||||||||||||||||| ||||||||||| |||||||||||| ||||     
T  26887573 tcccaaataaattctga-cggttaactttaacttcaaatatctatggtgtaccaaccttaaaagtggtctatcgtagacctcattaattttatttatttc 26887475  T
Q  422 aacagttcgatctatttatcataata-ggaccgttaga 458  Q
    |||  ||||||||| |||| |||| | |||||||||||    
T  26887474 aaccattcgatctaattatgataaaagggaccgttaga 26887437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 248 - 369
Target Start/End: Complemental strand, 53194962 - 53194841
Alignment:
Q  248 aataatttcaagttttcattttggtcccacaattaataaaacgtatcttttggtccctcacttttttctccgtttgccaaataaatcccgaactgttaac 347  Q
    ||||||||||||||||||||||||||||| |||||||||||||||  ||||||||||||||||||| |||  ||||||||||||||||    |||||||     
T  53194962 aataatttcaagttttcattttggtcccataattaataaaacgtacgttttggtccctcactttttcctctatttgccaaataaatccatgtctgttaag 53194863  T
Q  348 tttaactccaaatgtctatggt 369  Q
    |||||||| |||||||||||||    
T  53194862 tttaactcaaaatgtctatggt 53194841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 249 - 459
Target Start/End: Complemental strand, 40745557 - 40745347
Alignment:
Q  249 ataatttcaagttttcattttggtcccacaattaataaaacgtatcttttggtccctcacttttttctccgtttgccaaataaatcccgaactgttaact 348  Q
    ||||||| ||||||||||||||||| ||||||| ||||||| |   ||||| |||||||  |||| ||  |||||| |||||||||  || | |||||||    
T  40745557 ataattttaagttttcattttggtctcacaattgataaaactttcgttttgatccctcagattttcctttgtttgcaaaataaatcttgacc-gttaact 40745459  T
Q  349 ttaactccaaatgtctatggtagaccaaccttaaaagtggtccatcgtagaccttattaattttattaattttaacagttcgatctatttatcataata- 447  Q
    |||| ||||||||| |||| |  | |||||||||||||||| |||||||||||||||||||||| ||||||||||    ||||||||||||| |||| |     
T  40745458 ttaattccaaatgtttatgatgtatcaaccttaaaagtggttcatcgtagaccttattaattttgttaattttaattactcgatctatttattataaaag 40745359  T
Q  448 ggaccgttagat 459  Q
    ||||||||||||    
T  40745358 ggaccgttagat 40745347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 222 - 336
Target Start/End: Original strand, 53187557 - 53187670
Alignment:
Q  222 ggcttatttgatcgaatggtccctcaaataatttcaagttttcattttggtcccacaattaataaaacgtatcttttggtccctcacttttttctccgtt 321  Q
    |||||||||||||||||||||||  |||||||||||||||||||||||| ||  ||||||||||||| ||||  ||||||||||||||||||  ||||||    
T  53187557 ggcttatttgatcgaatggtcccctaaataatttcaagttttcattttgatcttacaattaataaaatgtat-gtttggtccctcactttttcttccgtt 53187655  T
Q  322 tgccaaataaatccc 336  Q
    |||||||||||||||    
T  53187656 tgccaaataaatccc 53187670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 222 - 334
Target Start/End: Original strand, 37735304 - 37735416
Alignment:
Q  222 ggcttatttgatcgaatggtccctcaaataatttcaagttttcattttggtcccacaattaataaaacgtatcttttggtccctcacttttttctccgtt 321  Q
    ||||||||||||| | |||||| | ||||||||| |||||||||||||||||||| |||||||||||||||| |||| |||||||| |||||||| ||||    
T  37735304 ggcttatttgatccattggtcctttaaataattttaagttttcattttggtcccataattaataaaacgtatgttttagtccctcatttttttcttcgtt 37735403  T
Q  322 tgccaaataaatc 334  Q
    || ||||||||||    
T  37735404 tgtcaaataaatc 37735416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 240 - 332
Target Start/End: Complemental strand, 37736181 - 37736089
Alignment:
Q  240 gtccctcaaataatttcaagttttcattttggtcccacaattaataaaacgtatcttttggtccctcacttttttctccgtttgccaaataaa 332  Q
    |||||| ||||||||||| ||||||||||||||| ||||||||||||||||||  |||| |||||||||||||||||||||||||||||||||    
T  37736181 gtcccttaaataatttcatgttttcattttggtctcacaattaataaaacgtacgttttagtccctcacttttttctccgtttgccaaataaa 37736089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 247 - 434
Target Start/End: Original strand, 42684899 - 42685086
Alignment:
Q  247 aaataatttcaagttttcattttggtcccacaattaataaaacgtatcttttggtccctcacttttttctccgtttgccaaataaatcccgaactgttaa 346  Q
    ||||||||| |||||||||||||||| ||| ||| ||||||||  |  |||| |||||||| ||||||||  |||| ||||||||||||   ||||||||    
T  42684899 aaataattttaagttttcattttggttccataatgaataaaactgacgttttagtccctcatttttttctatgtttaccaaataaatccttgactgttaa 42684998  T
Q  347 ctttaactccaaatgtctatggtagaccaaccttaaaagtggtccatcgtagaccttattaattttattaattttaacagttcgatct 434  Q
     |||||| |||||||||||||||  ||||| ||||| ||||||||| | || |||||||||| ||| ||||||| ||| ||| |||||    
T  42684999 gtttaaccccaaatgtctatggtgaaccaagcttaagagtggtccaccataaaccttattaaattttttaatttaaaccgtttgatct 42685086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 250 - 413
Target Start/End: Original strand, 53612897 - 53613059
Alignment:
Q  250 taatttcaagttttcattttggtcccacaattaataaaacgtatcttttggtccctcacttttttctccgtttgccaaataaatcccgaactgttaactt 349  Q
    |||||||  |||||||||||||||||| |||||||||||      ||||  |||||||| |||| ||| |||||||||||||||||||| | ||||||||    
T  53612897 taatttcttgttttcattttggtcccataattaataaaaatggcgttttattccctcacattttcctctgtttgccaaataaatcccgacc-gttaactt 53612995  T
Q  350 taactccaaatgtctatggtagaccaaccttaaaagtggtccatcgtagaccttattaatttta 413  Q
    ||||| |||||||||||| |  |||||| ||||||||||| ||| |||||||||||||||||||    
T  53612996 taacttcaaatgtctatgatgaaccaactttaaaagtggttcattgtagaccttattaatttta 53613059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 222 - 334
Target Start/End: Complemental strand, 36176625 - 36176512
Alignment:
Q  222 ggcttatttgatcgaatggtccctcaaataatttcaagttttcattttggtcccacaattaataaaacgtatcttttggtccctcactttttt-ctccgt 320  Q
    ||||||||||||| |||||||||   | |||||||| |||||||||||||||||||||||||||||| |||| ||||||||||||| |||||| ||| ||    
T  36176625 ggcttatttgatccaatggtcccctgattaatttcatgttttcattttggtcccacaattaataaaatgtatgttttggtccctcatttttttcctctgt 36176526  T
Q  321 ttgccaaataaatc 334  Q
    ||||||||||||||    
T  36176525 ttgccaaataaatc 36176512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 222 - 335
Target Start/End: Original strand, 40364317 - 40364430
Alignment:
Q  222 ggcttatttgatcgaatggtccctcaaataatttcaagttttcattttggtcccacaattaataaaacgtatcttttggtccctcacttttttctccgtt 321  Q
    ||||||||||||| |||||| ||  |||||||||||||||||||||||||||| | ||||||||||| |||  |||  |||||||| |||||||||||||    
T  40364317 ggcttatttgatctaatggttccctaaataatttcaagttttcattttggtcctaaaattaataaaatgtacgtttaagtccctcatttttttctccgtt 40364416  T
Q  322 tgccaaataaatcc 335  Q
    ||||||||||||||    
T  40364417 tgccaaataaatcc 40364430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 325 - 445
Target Start/End: Complemental strand, 3209982 - 3209862
Alignment:
Q  325 caaataaatcccgaactgttaacttt-aactccaaatgtctatggtagaccaaccttaaaagtggtccatcgtagaccttattaattttattaattttaa 423  Q
    |||||||||||| |||| |||||||| |||| ||||||| |||||| |||||||||||||| | |||||||||| |||||||||||||| ||||||||||    
T  3209982 caaataaatccc-aactattaacttttaacttcaaatgtatatggtggaccaaccttaaaaatagtccatcgtaaaccttattaattttgttaattttaa 3209884  T
Q  424 cagttcgatctatttatcataa 445  Q
    |  || ||||||||||||||||    
T  3209883 ccatttgatctatttatcataa 3209862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 225 - 334
Target Start/End: Complemental strand, 18458772 - 18458663
Alignment:
Q  225 ttatttgatcgaatggtccctcaaataatttcaagttttcattttggtcccacaattaataaaacgtatcttttggtccctcacttttttctccgtttgc 324  Q
    |||||||||| | | |||||  ||||||||||||||||| ||||||||||||||||||||||||| |   |||| |||||||||||||| ||||||||||    
T  18458772 ttatttgatccattagtcccctaaataatttcaagtttttattttggtcccacaattaataaaacttgcgttttagtccctcactttttcctccgtttgc 18458673  T
Q  325 caaataaatc 334  Q
    ||||||||||    
T  18458672 caaataaatc 18458663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 258 - 420
Target Start/End: Complemental strand, 20288306 - 20288144
Alignment:
Q  258 agttttcattttggtcccacaattaataaaacgtatcttttggtccctcacttttttctccgtttgccaaataaatcccgaactgttaactttaactcca 357  Q
    ||||||||||||| ||||| ||||||||||||  || | |||||||||||  ||| |||| ||| | ||||||||||||  |||||||| ||||||||||    
T  20288306 agttttcattttgatcccataattaataaaactcatgtgttggtccctcaagtttgtctctgttagtcaaataaatccctgactgttaagtttaactcca 20288207  T
Q  358 aatgtctatggtagaccaaccttaaaagtggtccatcgtagaccttattaattttattaattt 420  Q
    |||||||||||| ||||||| ||| |  |  |||| | ||||||||||||||||  |||||||    
T  20288206 aatgtctatggtggaccaacattatagatattccaccatagaccttattaatttatttaattt 20288144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 250 - 336
Target Start/End: Complemental strand, 53421851 - 53421765
Alignment:
Q  250 taatttcaagttttcattttggtcccacaattaataaaacgtatcttttggtccctcacttttttctccgtttgccaaataaatccc 336  Q
    |||||| | ||||||||||| |||| |||||||||||||||||  ||||||||||||||||||||||| ||||||||||||||||||    
T  53421851 taattttacgttttcattttagtcctacaattaataaaacgtacgttttggtccctcacttttttctctgtttgccaaataaatccc 53421765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 223 - 330
Target Start/End: Complemental strand, 34819401 - 34819295
Alignment:
Q  223 gcttatttgatcgaatggtccctcaaataatttcaagttttcattttggtcccacaattaataaaacgtatcttttggtccctcacttttttctccgttt 322  Q
    |||||||||||| | | ||||||||||||||||||||||||||||||| ||| |||||||||||||||||  |||  |||| |||| |||||||| ||||    
T  34819401 gcttatttgatccattagtccctcaaataatttcaagttttcattttgatcctacaattaataaaacgtacgtttaagtccttcac-tttttctctgttt 34819303  T
Q  323 gccaaata 330  Q
    ||||||||    
T  34819302 gccaaata 34819295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 238 - 335
Target Start/End: Original strand, 41544676 - 41544773
Alignment:
Q  238 tggtccctcaaataatttcaagttttcattttggtcccacaattaataaaacgtatcttttggtccctcacttttttctccgtttgccaaataaatcc 335  Q
    |||||| | |||||||||||||||||||||||||||| | |||||||| ||||||  |||  |||||||||||||| ||| |||||||||||||||||    
T  41544676 tggtccattaaataatttcaagttttcattttggtcctataattaatataacgtacgtttaagtccctcactttttcctctgtttgccaaataaatcc 41544773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 214 - 390
Target Start/End: Original strand, 53622651 - 53622830
Alignment:
Q  214 tttatttt-ggcttatttgatcgaatggtccctcaaataatttcaagttttcattttggtcccacaattaataaaacgtatcttttggtccctcactttt 312  Q
    |||||||| |||||||| |||| | | ||||||| | ||||||  | | |||||||||||| ||||||||||||||  ||| ||||| ||||| |  |||    
T  53622651 tttattttaggcttattagatccattcgtccctcgattaattttcattattcattttggtcgcacaattaataaaaaatatattttgatcccttagattt 53622750  T
Q  313 ttctccgtttgccaaataaatcccgaactgttaactttaactccaa---atgtctatggtagaccaaccttaaaagtggtc 390  Q
    | ||||||||||||| |||||||| ||| ||||| |||||| ||||   ||||||||||| |||||||||||| |||||||    
T  53622751 tcctccgtttgccaactaaatccc-aacggttaagtttaaccccaaatgatgtctatggtggaccaaccttaagagtggtc 53622830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 250 - 392
Target Start/End: Original strand, 3208510 - 3208653
Alignment:
Q  250 taatttcaagttttcattttggtcccacaattaataaaacgtatcttttggtccctcacttttttctccgtttgccaaataaatcccgaactgttaactt 349  Q
    ||||||| | ||||||||||||||||| |||||||||||||||  ||||| ||||| | ||||| ||||||||| |||||||||||  | | ||||| ||    
T  3208510 taatttccatttttcattttggtcccataattaataaaacgtacgttttgatcccttattttttcctccgtttgtcaaataaatccttacc-gttaagtt 3208608  T
Q  350 taactccaaatgtc--tatggtagaccaaccttaaaagtggtcca 392  Q
    |||| |||||||    |||||| |||||||||||| |||||||||    
T  3208609 taaccccaaatgatattatggtggaccaaccttaagagtggtcca 3208653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 278 - 367
Target Start/End: Original strand, 36175317 - 36175405
Alignment:
Q  278 aattaataaaacgtatcttttggtccctcacttttttctccgtttgccaaataaatcccgaactgttaactttaactccaaatgtctatg 367  Q
    ||||||| |||||||  ||||||| ||||| ||||||||||||||||||||||||| ||| |||||||| |||||| |||||||||||||    
T  36175317 aattaatgaaacgtacgttttggtgcctcatttttttctccgtttgccaaataaat-ccggactgttaagtttaaccccaaatgtctatg 36175405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 222 - 289
Target Start/End: Complemental strand, 3210049 - 3209982
Alignment:
Q  222 ggcttatttgatcgaatggtccctcaaataatttcaagttttcattttggtcccacaattaataaaac 289  Q
    ||||||||||||  |||||||||| ||||||||| || ||||||||||||||||||||||||||||||    
T  3210049 ggcttatttgattcaatggtcccttaaataattttaaattttcattttggtcccacaattaataaaac 3209982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 250 - 410
Target Start/End: Complemental strand, 3455715 - 3455554
Alignment:
Q  250 taatttcaagttttcattttggtcccacaattaataaaacgtatcttttggtccctcacttttttctccgtttgccaaataaatcccgaactgttaactt 349  Q
    |||||||||||||||||||||||| || || |||||||||  || ||||||||| |||  ||| |||||||  | ||||||||||| | || ||||||||    
T  3455715 taatttcaagttttcattttggtctcataactaataaaactcatgttttggtccttcatgtttgtctccgtcagtcaaataaatcctg-acagttaactt 3455617  T
Q  350 taactcc---aaatgtctatggtagaccaaccttaaaagtggtccatcgtagaccttattaatt 410  Q
    |||| ||   |||||| |||||| |||||||||||| ||||||||| | |||| | ||||||||    
T  3455616 taaccccccaaaatgt-tatggtggaccaaccttaagagtggtccaccatagatcatattaatt 3455554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 225 - 334
Target Start/End: Complemental strand, 23443572 - 23443463
Alignment:
Q  225 ttatttgatcgaatggtccctcaaataatttcaagttttcattttggtcccacaattaataaaacgtatcttttggtccctcacttttttctccgtttgc 324  Q
    |||||||||| |||| ||||| || |||||| || ||||||||||||||||| ||||||||||||||| ||||  |||| |||  ||||  || ||||||    
T  23443572 ttatttgatccaatgatcccttaattaattttaacttttcattttggtcccaaaattaataaaacgtacctttaagtccttcatcttttcttctgtttgc 23443473  T
Q  325 caaataaatc 334  Q
    ||||||||||    
T  23443472 caaataaatc 23443463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 279 - 411
Target Start/End: Original strand, 12106629 - 12106760
Alignment:
Q  279 attaataaaacgtatcttttggtccctcacttttttctccgtttgccaaataaatcccgaactgttaactttaactccaaatgtctatggtagaccaacc 378  Q
    ||||||||||||||  ||||||||||||||||||||||||||||  ||||||||| ||   |||| |||||||||   ||||||||||  | |||||       
T  12106629 attaataaaacgtacattttggtccctcacttttttctccgtttatcaaataaat-cctttctgtcaactttaaccttaaatgtctattatggaccagta 12106727  T
Q  379 ttaaaagtggtccatcgtagaccttattaattt 411  Q
    ||| || ||||||| ||||||||||||||||||    
T  12106728 ttataaatggtccaccgtagaccttattaattt 12106760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 247 - 377
Target Start/End: Original strand, 18442275 - 18442401
Alignment:
Q  247 aaataatttcaagttttcattttggtcccacaattaataaaacgtatcttttggtccctcacttttttctccgtttgccaaataaatcccgaactgttaa 346  Q
    |||||||||||||||||||||||||||||||||||||||||||  |  |||| |||| ||| ||||| |||   |||||||||||||  |    ||||||    
T  18442275 aaataatttcaagttttcattttggtcccacaattaataaaacccacgttttagtccatcattttttcctc---ttgccaaataaat-tcatgttgttaa 18442370  T
Q  347 ctttaactccaaatgtctatggtagaccaac 377  Q
     |||||| ||||||||||||||| |||||||    
T  18442371 gtttaaccccaaatgtctatggtggaccaac 18442401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 247 - 377
Target Start/End: Original strand, 19487349 - 19487475
Alignment:
Q  247 aaataatttcaagttttcattttggtcccacaattaataaaacgtatcttttggtccctcacttttttctccgtttgccaaataaatcccgaactgttaa 346  Q
    |||||||||||||||||||||||||||||||||||||||||||  |  |||| |||| ||| ||||| |||   |||||||||||||  |    ||||||    
T  19487349 aaataatttcaagttttcattttggtcccacaattaataaaacccacgttttagtccatcattttttcctc---ttgccaaataaat-tcatgttgttaa 19487444  T
Q  347 ctttaactccaaatgtctatggtagaccaac 377  Q
     |||||| ||||||||||||||| |||||||    
T  19487445 gtttaaccccaaatgtctatggtggaccaac 19487475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 250 - 424
Target Start/End: Original strand, 24403265 - 24403439
Alignment:
Q  250 taatttcaagttttcattttggtcccacaattaataaaacgtatcttttggtccctcacttttttctccgtttgccaaataaatcccgaactgttaactt 349  Q
    |||||||||||||||||| ||||| || |||||||||||  ||| |||||||||||||  ||   ||||||||| ||| |||||||     |||||||||    
T  24403265 taatttcaagttttcattatggtctcataattaataaaatttatgttttggtccctcaagttcacctccgtttgtcaagtaaatccatgtttgttaactt 24403364  T
Q  350 taactccaaatgtctatggtagaccaaccttaaaagtggtccatcgtagaccttattaattttattaattttaac 424  Q
    |||| | |||||||||||||  || ||| ||| |  | ||||| | || |||||||||||||| | |||||||||    
T  24403365 taaccctaaatgtctatggtgaactaacattatagatagtccaccataaaccttattaattttttcaattttaac 24403439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 220 - 334
Target Start/End: Complemental strand, 41264773 - 41264659
Alignment:
Q  220 ttggcttatttgatcgaatggtccctcaaataatttcaagttttcattttggtcccacaattaataaaacgtatcttttggtccctcacttttttctccg 319  Q
    |||||||||| ||| |  |||||||| |  |||||||| ||||||||||||||| |||| |||||||||      ||||| |||||||| ||||||||||    
T  41264773 ttggcttattagattgtttggtcccttatttaatttcatgttttcattttggtctcacatttaataaaaatggcgttttgatccctcacctttttctccg 41264674  T
Q  320 tttgccaaataaatc 334  Q
    |||||||||||||||    
T  41264673 tttgccaaataaatc 41264659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 379 - 445
Target Start/End: Original strand, 42592693 - 42592759
Alignment:
Q  379 ttaaaagtggtccatcgtagaccttattaattttattaattttaacagttcgatctatttatcataa 445  Q
    |||||||||||| ||  ||||||||||||||||| |||||||||||  |||||||||||||||||||    
T  42592693 ttaaaagtggtctattctagaccttattaattttgttaattttaaccattcgatctatttatcataa 42592759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 222 - 287
Target Start/End: Original strand, 12105288 - 12105353
Alignment:
Q  222 ggcttatttgatcgaatggtccctcaaataatttcaagttttcattttggtcccacaattaataaa 287  Q
    ||||||||| ||  |||||| |||||||||||||||||||||||| |||| |||||||||||||||    
T  12105288 ggcttatttaattcaatggttcctcaaataatttcaagttttcatattggccccacaattaataaa 12105353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 295 - 420
Target Start/End: Complemental strand, 20314809 - 20314684
Alignment:
Q  295 ttttggtccctcacttttttctccgtttgccaaataaatcccgaactgttaactttaactccaaatgtctatggtagaccaaccttaaaagtggtccatc 394  Q
    |||||||||||||  ||| |||| ||| | ||||||||| |   |||||||| |||||||||||||||||||| ||||||||| ||| |  | ||||| |    
T  20314809 ttttggtccctcaagtttgtctctgttagtcaaataaattcatgactgttaagtttaactccaaatgtctatgttagaccaacattatagatagtccacc 20314710  T
Q  395 gtagaccttattaattttattaattt 420  Q
     ||||||||||||||||  |||||||    
T  20314709 atagaccttattaatttatttaattt 20314684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 295 - 420
Target Start/End: Complemental strand, 20336702 - 20336577
Alignment:
Q  295 ttttggtccctcacttttttctccgtttgccaaataaatcccgaactgttaactttaactccaaatgtctatggtagaccaaccttaaaagtggtccatc 394  Q
    |||||||||||||  ||| |||||||| | ||||||||| |   |||||||| |||||||||||||||||||| | ||||||| ||| |  | ||||| |    
T  20336702 ttttggtccctcaagtttgtctccgttagtcaaataaattcatgactgttaagtttaactccaaatgtctatgttggaccaacattatagatagtccacc 20336603  T
Q  395 gtagaccttattaattttattaattt 420  Q
     ||||||||||||||||  |||||||    
T  20336602 atagaccttattaatttatttaattt 20336577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 259 - 420
Target Start/End: Complemental strand, 10732210 - 10732048
Alignment:
Q  259 gttttcattttggtcccacaattaataaaacgtatcttttggtccctcacttttttctccgtttgccaaataaatcccgaactgttaactttaactccaa 358  Q
    |||||||||||||||||| |||||||||||      |||| ||||||||| |||| |||||||| |||||||||| |||| | ||||| |||||| | ||    
T  10732210 gttttcattttggtcccataattaataaaaatggcgttttagtccctcacattttcctccgtttaccaaataaattccga-cggttaagtttaacccaaa 10732112  T
Q  359 --atgtctatggtagaccaaccttaaaagtggtccatcgtagaccttattaattttattaattt 420  Q
      ||||||||||| |||||||||| | || |||||| | |||| | |||||||| | |||||||    
T  10732111 tgatgtctatggtggaccaacctttagagcggtccaccatagatcctattaattattttaattt 10732048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 258 - 334
Target Start/End: Complemental strand, 28909687 - 28909611
Alignment:
Q  258 agttttcattttggtcccacaattaataaaacgtatcttttggtccctcacttttttctccgtttgccaaataaatc 334  Q
    ||||||||||||||||||| || |||||||||  || |||||||||||||| ||| |||||||| | ||||||||||    
T  28909687 agttttcattttggtcccataactaataaaactcatgttttggtccctcacgtttgtctccgttggtcaaataaatc 28909611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 222 - 335
Target Start/End: Complemental strand, 53614391 - 53614278
Alignment:
Q  222 ggcttatttgatcgaatggtccctcaaataatttcaagttttcattttggtcccacaattaataaaacgtatcttttggtccctcacttttttctccgtt 321  Q
    |||||||| |||||  |||||||| |  |||||||  ||||| |||||||||||||||||||||||||     |||| ||||||||| |||| |||  ||    
T  53614391 ggcttattagatcgtttggtcccttatttaatttcttgtttttattttggtcccacaattaataaaactggcgttttagtccctcacattttcctctatt 53614292  T
Q  322 tgccaaataaatcc 335  Q
    ||||||||||||||    
T  53614291 tgccaaataaatcc 53614278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 222 - 288
Target Start/End: Original strand, 35370911 - 35370977
Alignment:
Q  222 ggcttatttgatcgaatggtccctcaaataatttcaagttttcattttggtcccacaattaataaaa 288  Q
    |||||||| |||||  |||||||| |  |||||||| |||||||||||| |||||||||||||||||    
T  35370911 ggcttattagatcgtttggtcccttatttaatttcatgttttcattttgatcccacaattaataaaa 35370977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 218 - 336
Target Start/End: Complemental strand, 38247598 - 38247480
Alignment:
Q  218 ttttggcttatttgatcgaatggtccctcaaataatttcaagttttcattttggtcccacaattaataaaacgtatcttttggtccctcacttttttctc 317  Q
    ||||||||||  ||||| | |||||||| || ||||||| | ||||||||||||||  | || ||||||||||||  ||||||| ||| | ||||  | |    
T  38247598 ttttggcttaaatgatccattggtcccttaattaatttccaattttcattttggtcatataagtaataaaacgtacattttggttccttagttttcacac 38247499  T
Q  318 cgtttgccaaataaatccc 336  Q
    ||||||||||| |||||||    
T  38247498 cgtttgccaaaaaaatccc 38247480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 342 - 412
Target Start/End: Original strand, 55423511 - 55423581
Alignment:
Q  342 gttaactttaactccaaatgtctatggtagaccaaccttaaaagtggtccatcgtagaccttattaatttt 412  Q
    |||||||| ||| ||||||||||  ||| ||||||||||  | |||||||| |||||||||||||||||||    
T  55423511 gttaacttcaaccccaaatgtcttaggtggaccaaccttgtaggtggtccaccgtagaccttattaatttt 55423581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 219 - 288
Target Start/End: Complemental strand, 3817384 - 3817315
Alignment:
Q  219 tttggcttatttgatcgaatggtccctcaaataatttcaagttttcattttggtcccacaattaataaaa 288  Q
    ||||||||||| |||||  |||||||  || |||||||| |||||||||||||||||| | |||||||||    
T  3817384 tttggcttattagatcgtttggtcccctaactaatttcatgttttcattttggtcccatatttaataaaa 3817315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 250 - 335
Target Start/End: Original strand, 26886298 - 26886383
Alignment:
Q  250 taatttcaagttttcattttggtcccacaattaataaaacgtatcttttggtccctcacttttttctccgtttgccaaataaatcc 335  Q
    ||||||||  ||||||||||||||  |||||||||||||    | ||||| |||||||| ||| |||| |||||||||||||||||    
T  26886298 taatttcatattttcattttggtctaacaattaataaaaatggtgttttgatccctcacgtttgtctctgtttgccaaataaatcc 26886383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 241 - 334
Target Start/End: Complemental strand, 42686244 - 42686151
Alignment:
Q  241 tccctcaaataatttcaagttttcattttggtcccacaattaataaaacgtatcttttggtccctcacttttttctccgtttgccaaataaatc 334  Q
    ||||| ||||||||  | ||||| |||||| ||| ||||||||||||||     |||| |||||||||||||||||| ||||| ||||||||||    
T  42686244 tcccttaaataattctatgtttttattttgatcctacaattaataaaacaggcattttagtccctcacttttttctctgtttgtcaaataaatc 42686151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 265 - 333
Target Start/End: Complemental strand, 3808048 - 3807980
Alignment:
Q  265 attttggtcccacaattaataaaacgtatcttttggtccctcacttttttctccgtttgccaaataaat 333  Q
    ||||||||| |||||||||||||||  |  |||| |||| ||||||||||| | |||||||||||||||    
T  3808048 attttggtctcacaattaataaaactcacgttttagtccttcacttttttcacagtttgccaaataaat 3807980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 326 - 434
Target Start/End: Original strand, 7270425 - 7270533
Alignment:
Q  326 aaataaatcccgaactgttaactttaactccaaatgtctatggtagaccaaccttaaaagtggtccatcgtagaccttattaattttattaattttaaca 425  Q
    |||| |||||| ||| ||||||||||||  ||||||||| | || |||||||||||| ||||||| | | |||| |||||||| ||| || | ||||||     
T  7270425 aaattaatccctaaccgttaactttaacctcaaatgtctgtagtggaccaaccttaagagtggtctaccatagatcttattaacttttttgactttaact 7270524  T
Q  426 gttcgatct 434  Q
    ||| |||||    
T  7270525 gtttgatct 7270533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 250 - 314
Target Start/End: Complemental strand, 55328395 - 55328331
Alignment:
Q  250 taatttcaagttttcattttggtcccacaattaataaaacgtatcttttggtccctcactttttt 314  Q
    ||||||||||||||||||||| || || |||||||||||   || |||| |||||||||||||||    
T  55328395 taatttcaagttttcattttgatctcataattaataaaattcatgttttagtccctcactttttt 55328331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 217 - 288
Target Start/End: Original strand, 3811520 - 3811591
Alignment:
Q  217 attttggcttatttgatcgaatggtccctcaaataatttcaagttttcattttggtcccacaattaataaaa 288  Q
    ||||||||||||| |||||  |||| ||  || |||||||| |||||||||||||||||| | |||||||||    
T  3811520 attttggcttattagatcgtttggtaccctaactaatttcatgttttcattttggtcccatatttaataaaa 3811591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 345 - 436
Target Start/End: Complemental strand, 14745195 - 14745104
Alignment:
Q  345 aactttaactccaaatgtctatggtagaccaaccttaaaagtggtccatcgtagaccttattaattttattaattttaacagttcgatctat 436  Q
    ||||||||| |||||| ||| |||| |||||||||||| |||||| || | |||| | |||||||| | ||||||| ||| ||| |||||||    
T  14745195 aactttaaccccaaatatctgtggtggaccaaccttaagagtggttcaccatagatcctattaattattttaatttaaactgtttgatctat 14745104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 342 - 412
Target Start/End: Complemental strand, 31282536 - 31282466
Alignment:
Q  342 gttaactttaactccaaatgtctatggtagaccaaccttaaaagtggtccatcgtagaccttattaatttt 412  Q
    |||||||| ||| |||||| |||  ||| ||||||||||  | |||||||| |||||||||||||||||||    
T  31282536 gttaacttcaaccccaaatatcttaggtggaccaaccttgtaggtggtccaccgtagaccttattaatttt 31282466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 342 - 436
Target Start/End: Original strand, 48083345 - 48083439
Alignment:
Q  342 gttaactttaactccaaatgtctatggtagaccaaccttaaaagtggtccatcgtagaccttattaattttattaattttaacagttcgatctat 436  Q
    ||||||||||||  ||||||||||||||  || |||||||| ||||||| | | |||| | |||||||| | ||||||| |||  ||||||||||    
T  48083345 gttaactttaaccacaaatgtctatggtgcactaaccttaagagtggtctaccatagatcctattaattattttaatttaaaccattcgatctat 48083439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 359 - 424
Target Start/End: Original strand, 35371043 - 35371108
Alignment:
Q  359 atgtctatggtagaccaaccttaaaagtggtccatcgtagaccttattaattttattaattttaac 424  Q
    |||| |||||| |||||||||||| ||||||||| | |||| | |||||||| | |||||||||||    
T  35371043 atgtttatggtggaccaaccttaagagtggtccaccatagatcctattaattattttaattttaac 35371108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 338 - 410
Target Start/End: Original strand, 49379815 - 49379888
Alignment:
Q  338 aactgttaactttaactcc-aaatgtctatggtagaccaaccttaaaagtggtccatcgtagaccttattaatt 410  Q
    |||||||||||||||| || ||||||||||||| |||| || |||||| ||||||| | |||| | ||||||||    
T  49379815 aactgttaactttaacccccaaatgtctatggtggaccgactttaaaaatggtccaccatagatcctattaatt 49379888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 236 - 276
Target Start/End: Complemental strand, 10301922 - 10301882
Alignment:
Q  236 aatggtccctcaaataatttcaagttttcattttggtccca 276  Q
    ||||||||||||| ||||||| | |||||||||||||||||    
T  10301922 aatggtccctcaactaatttccatttttcattttggtccca 10301882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 340 - 424
Target Start/End: Original strand, 10338854 - 10338938
Alignment:
Q  340 ctgttaactttaactccaaatgtctatggtagaccaaccttaaaagtggtccatcgtagaccttattaattttattaattttaac 424  Q
    ||||||||||||||  || ||||||||  |  ||||||||||| ||||||||| | |||| | |||||||| | |||||||||||    
T  10338854 ctgttaactttaacctcagatgtctataatgaaccaaccttaagagtggtccaccatagatcctattaattattttaattttaac 10338938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 339 - 410
Target Start/End: Original strand, 13621034 - 13621106
Alignment:
Q  339 actgttaactttaac-tccaaatgtctatggtagaccaaccttaaaagtggtccatcgtagaccttattaatt 410  Q
    ||||||||||||||| |||||||||||||||| |||| || | |||| ||||||| | |||| | ||||||||    
T  13621034 actgttaactttaacctccaaatgtctatggtggaccgacttaaaaaatggtccaccatagatcctattaatt 13621106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 348 - 424
Target Start/End: Complemental strand, 43346442 - 43346366
Alignment:
Q  348 tttaactccaaatgtctatggtagaccaaccttaaaagtggtccatcgtagaccttattaattttattaattttaac 424  Q
    |||||| | ||||||||| ||| ||||||| ||| | |||||||| | ||||||||| ||| ||| |||||||||||    
T  43346442 tttaaccctaaatgtctaaggtggaccaacattataggtggtccaccatagaccttactaaattttttaattttaac 43346366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 265 - 333
Target Start/End: Original strand, 44182323 - 44182391
Alignment:
Q  265 attttggtcccacaattaataaaacgtatcttttggtccctcacttttttctccgtttgccaaataaat 333  Q
    ||||||||| |||||||||||||||  |  |||| |||| ||||||||| | | |||||||||||||||    
T  44182323 attttggtctcacaattaataaaactcacgttttagtccttcactttttccacagtttgccaaataaat 44182391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 125; Significance: 4e-64; HSPs: 53)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 125; E-Value: 4e-64
Query Start/End: Original strand, 213 - 424
Target Start/End: Original strand, 27814281 - 27814492
Alignment:
Q  213 atttattttggcttatttgatcgaatggtccctcaaataatttcaagttttcattttggtcccacaattaataaaacgtatcttttggtccctcactttt 312  Q
    |||||| |||||||||||| || |||  ||||||||||||||||||||||||||||| |||| | ||||||||||||||| |||||||||||||| ||||    
T  27814281 atttatattggcttatttgttccaatcatccctcaaataatttcaagttttcattttagtcctataattaataaaacgtaccttttggtccctcattttt 27814380  T
Q  313 ttctccgtttgccaaataaatcccgaactgttaac-tttaactccaaatgtctatggtagaccaaccttaaaagtggtccatcgtagaccttattaattt 411  Q
    | ||| ||||||||||||||||||| || |||||| |||||||| ||||||||||||| ||||||| ||||||||||||||||||| |||||||||||||    
T  27814381 tcctctgtttgccaaataaatcccg-acggttaacttttaactctaaatgtctatggtggaccaactttaaaagtggtccatcgtaaaccttattaattt 27814479  T
Q  412 tattaattttaac 424  Q
    | |||||||||||    
T  27814480 tgttaattttaac 27814492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 115; E-Value: 4e-58
Query Start/End: Original strand, 221 - 434
Target Start/End: Complemental strand, 50444817 - 50444605
Alignment:
Q  221 tggcttatttgatcgaatggtccctcaaataatttcaagttttcattttggtcccacaattaataaaacgtatcttttggtccctcacttttttctccgt 320  Q
    |||||||||||||  ||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||  ||||||||||||| ||||| |||||     
T  50444817 tggcttatttgattcaatggtccctcaaataatttcaaattttcattttagtcccacaattaataaaacgtacattttggtccctcattttttcctccga 50444718  T
Q  321 ttgccaaataaatcccgaactgttaactttaactcc-aaatgtctatggtagaccaaccttaaaagtggtccatcgtagaccttattaattttattaatt 419  Q
    ||||||||||||| || ||| ||||||||||||||| ||| ||||||| | |||||||||||| ||| ||||||||||||||||||||||||| || |||    
T  50444717 ttgccaaataaat-ccaaaccgttaactttaactccaaaacgtctatgttggaccaaccttaagagt-gtccatcgtagaccttattaattttgttcatt 50444620  T
Q  420 ttaacagttcgatct 434  Q
    ||||| ||| |||||    
T  50444619 ttaaccgtttgatct 50444605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 108; E-Value: 6e-54
Query Start/End: Original strand, 250 - 445
Target Start/End: Original strand, 16963860 - 16964054
Alignment:
Q  250 taatttcaagttttcattttggtcccacaattaataaaacgtatcttttggtccctcacttttttctccgtttgccaaataaatcccgaactgttaactt 349  Q
    |||||||| ||||||||||||||||||||||||||||||    | |||| ||||||||  |||| ||||||||||||||||||| | || ||||||||||    
T  16963860 taatttcatgttttcattttggtcccacaattaataaaaatggtgttttagtccctcatcttttcctccgtttgccaaataaatgctga-ctgttaactt 16963958  T
Q  350 taactccaaatgtctatggtagaccaaccttaaaagtggtccatcgtagaccttattaattttattaattttaacagttcgatctatttatcataa 445  Q
    |||||| |||||| |||| | |||||||||||||||||||||||| ||||||||||||||||| |||||||||||  |||||||||||||||||||    
T  16963959 taactctaaatgtttatgatggaccaaccttaaaagtggtccatcatagaccttattaattttgttaattttaacccttcgatctatttatcataa 16964054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 218 - 445
Target Start/End: Complemental strand, 15234163 - 15233938
Alignment:
Q  218 ttttggcttatttgatcgaatggtccctcaaataatttcaagttttcattttggtcccacaattaataaaacgtatcttttggtccctcacttttttctc 317  Q
    |||||||||||| |||||  |||||||| |  |||||||| ||||||||||||||||||||||||||||||      |||| ||||||||| |||| |||    
T  15234163 ttttggcttattagatcgtttggtcccttatttaatttcatgttttcattttggtcccacaattaataaaaatggcgttttagtccctcacattttcctc 15234064  T
Q  318 cgtttgccaaataaatcccgaactgttaactttaactccaaatgtctatggtagaccaaccttaaaagtggtccatcgtagaccttattaattttattaa 417  Q
    ||||||||||||||||||||| |||||| |||||||| |||||||||||  |||||||| ||| | |||||||||||||||||| ||||| |||| ||||    
T  15234063 cgtttgccaaataaatcccga-ctgtta-ctttaacttcaaatgtctataatagaccaatcttcagagtggtccatcgtagaccctattacttttgttaa 15233966  T
Q  418 ttttaacagttcgatctatttatcataa 445  Q
    |||||||  |||||||||||||||||||    
T  15233965 ttttaaccattcgatctatttatcataa 15233938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 103; E-Value: 6e-51
Query Start/End: Original strand, 222 - 420
Target Start/End: Complemental strand, 15072908 - 15072710
Alignment:
Q  222 ggcttatttgatcgaatggtccctcaaataatttcaagttttcattttggtcccacaattaataaaacgtatcttttggtccctcacttttttctccgtt 321  Q
    ||||||||||||  ||||||||   || |||||||||||||||||||||||||||||||||||||||||||  ||||||||||| | ||||| |||||||    
T  15072908 ggcttatttgattcaatggtcctctaattaatttcaagttttcattttggtcccacaattaataaaacgtacattttggtcccttattttttcctccgtt 15072809  T
Q  322 tgccaaataaatcccgaactgttaactttaactccaaatgtctatggtagaccaaccttaaaagtggtccatcgtagaccttattaattttattaattt 420  Q
    ||||||||||||||    ||||||||||||||  |||||||||||||| ||||||||| || ||||||||| |||||||  |||||||||| |||||||    
T  15072808 tgccaaataaatccatgtctgttaactttaacctcaaatgtctatggtggaccaacctaaagagtggtccaccgtagactctattaattttcttaattt 15072710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 96; E-Value: 9e-47
Query Start/End: Original strand, 221 - 424
Target Start/End: Complemental strand, 14477910 - 14477707
Alignment:
Q  221 tggcttatttgatcgaatggtccctcaaataatttcaagttttcattttggtcccacaattaataaaacgtatcttttggtccctcacttttttctccgt 320  Q
    |||||||||||||| |||||||||  ||||||||| ||||||||| |||| |||||||||||||||||||||  |||  |||||||||||||||||||||    
T  14477910 tggcttatttgatccaatggtcccataaataattttaagttttcactttgatcccacaattaataaaacgtacgtttaagtccctcacttttttctccgt 14477811  T
Q  321 ttgccaaataaatcccgaactgttaactttaactccaaatgtctatggtagaccaaccttaaaagtggtccatcgtagaccttattaattttattaattt 420  Q
    |||||||||||||||     |||||| |||||||| |||||||||||||||| ||| ||||| ||| ||||| | ||||| | ||||||||| | |||||    
T  14477810 ttgccaaataaatccttcgatgttaagtttaactctaaatgtctatggtagatcaatcttaagagttgtccaccatagacttcattaattttttaaattt 14477711  T
Q  421 taac 424  Q
    ||||    
T  14477710 taac 14477707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 250 - 440
Target Start/End: Complemental strand, 49802985 - 49802796
Alignment:
Q  250 taatttcaagttttcattttggtcccacaattaataaaacgtatcttttggtccctcacttttttctccgtttgccaaataaatcccgaactgttaactt 349  Q
    |||||||| ||||||||||||||||||||||||||||||   |  |||| ||||||||  ||||||||||||||||||||||||||||| | ||||||||    
T  49802985 taatttcatgttttcattttggtcccacaattaataaaaatgacgttttagtccctcatctttttctccgtttgccaaataaatcccga-cggttaactt 49802887  T
Q  350 taactccaaatgtctatggtagaccaaccttaaaagtggtccatcgtagaccttattaattttattaattttaacagttcgatctatttat 440  Q
     ||||| |||||||||||||  ||||||||||||||||||| ||||||||||| ||||||||| || |||| |||  ||||||||| ||||    
T  49802886 caactctaaatgtctatggtgtaccaaccttaaaagtggtctatcgtagacctcattaattttgtttatttcaactattcgatctacttat 49802796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 279 - 434
Target Start/End: Original strand, 46110337 - 46110491
Alignment:
Q  279 attaataaaacgtatcttttggtccctcacttttttctccgtttgccaaataaatcccgaactgttaactttaactccaaatgtctatggtagaccaacc 378  Q
    ||||||||||||||  |||||||| ||||  ||||||||||||||| ||||||||| ||| |||||||||||||||| |||| |||||||| ||||||||    
T  46110337 attaataaaacgtactttttggtcactcaagtttttctccgtttgctaaataaatctcga-ctgttaactttaactctaaatatctatggtggaccaacc 46110435  T
Q  379 ttaaaagtggtccatcgtagaccttattaattttattaattttaacagttcgatct 434  Q
    |||| ||||||||||||||||||||||||||||| ||||||||||| ||| |||||    
T  46110436 ttaagagtggtccatcgtagaccttattaattttgttaattttaaccgtttgatct 46110491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 222 - 335
Target Start/End: Complemental strand, 45585127 - 45585014
Alignment:
Q  222 ggcttatttgatcgaatggtccctcaaataatttcaagttttcattttggtcccacaattaataaaacgtatcttttggtccctcacttttttctccgtt 321  Q
    ||||||||||||| ||| |||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||| ||||||||| |||||||    
T  45585127 ggcttatttgatccaatagtccctcaaataatttcaagttttcattttggtctcacaattaataaaacgtaccttttggtccttcactttttcctccgtt 45585028  T
Q  322 tgccaaataaatcc 335  Q
    ||||||||||||||    
T  45585027 tgccaaataaatcc 45585014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 222 - 434
Target Start/End: Original strand, 14470854 - 14471066
Alignment:
Q  222 ggcttatttgatcgaatggtccctcaaataatttcaagttttcattttggtcccacaattaataaaacgtatcttttggtccctcacttttttctccgtt 321  Q
    ||||||||||||| |||||||||  ||||||||||||||||||||||||||||||||||||||||||||||   ||  |||||||||||||| || ||||    
T  14470854 ggcttatttgatccaatggtcccctaaataatttcaagttttcattttggtcccacaattaataaaacgtacggttaagtccctcactttttccttcgtt 14470953  T
Q  322 tgccaaataaatcccgaactgttaactttaactccaaatgtctatggtagaccaaccttaaaagtggtccatcgtagaccttattaattttattaatttt 421  Q
    ||||||||||||||     |||||| |||||| ||||| |||||| || |||||||||||| ||||||||| | || || | ||||||||| | ||||||    
T  14470954 tgccaaataaatccttcggtgttaagtttaaccccaaacgtctatagtggaccaaccttaagagtggtccaccataaacttcattaattttttaaatttt 14471053  T
Q  422 aacagttcgatct 434  Q
     || ||| |||||    
T  14471054 gaccgtttgatct 14471066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 222 - 424
Target Start/End: Complemental strand, 46111606 - 46111412
Alignment:
Q  222 ggcttatttgatcgaatggtccctcaaataatttcaagttttcattttggtcccacaattaataaaacgtatcttttggtccctcacttttttctccgtt 321  Q
    ||||||||||||  |||||||||| ||||||||||||||||| |||||||||||||||||||||||||||| |||||||| ||||| ||||| || ||||    
T  46111606 ggcttatttgattcaatggtcccttaaataatttcaagtttttattttggtcccacaattaataaaacgtaccttttggttcctcattttttccttcgtt 46111507  T
Q  322 tgccaaataaatcccgaactgttaac-tttaactccaaatgtctatggtagaccaaccttaaaagtggtccatcgtagaccttattaattttattaattt 420  Q
    |||||||||||||||| ||||||||| ||||||        |||||||| || |||| |||||||||||||||  |||| |||||||||| | ||||| |    
T  46111506 tgccaaataaatcccg-actgttaacttttaac--------tctatggtggatcaactttaaaagtggtccatgatagatcttattaattgtgttaatct 46111416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 86; E-Value: 8e-41
Query Start/End: Original strand, 224 - 408
Target Start/End: Complemental strand, 35943563 - 35943379
Alignment:
Q  224 cttatttgatcgaatggtccctcaaataatttcaagttttcattttggtcccacaattaataaaacgtatcttttggtccctcacttttttctccgtttg 323  Q
    ||||||||||  ||||||| || |||||||||||| |||| ||||||||||||||||||||||||||||  ||||||||| ||||||||| || ||||||    
T  35943563 cttatttgatttaatggtctcttaaataatttcaaatttttattttggtcccacaattaataaaacgtacattttggtcc-tcactttttccttcgtttg 35943465  T
Q  324 ccaaataaatcccgaa-ctgttaactttaactccaaatgtctatggtagaccaaccttaaaagtggtccatcgtagaccttattaa 408  Q
    |||||||||||||    ||||||| |||||| | ||||||||||||| |||||||||||| |||| |||| | |||||||||||||    
T  35943464 ccaaataaatcccctggctgttaagtttaaccctaaatgtctatggtggaccaaccttaagagtgatccaccatagaccttattaa 35943379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 221 - 377
Target Start/End: Complemental strand, 52628992 - 52628837
Alignment:
Q  221 tggcttatttgatcgaatggtccctcaaataatttcaagttttcattttggtcccacaattaataaaacgtatcttttggtccctcacttttttctccgt 320  Q
    |||||||||||||| |  ||||||| ||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||| ||||| ||||||    
T  52628992 tggcttatttgatctatcggtcccttaaataatttcaagttttaattttggtcccacaattaataaaacgtaccttttggtccctcattttttcctccgt 52628893  T
Q  321 ttgccaaataaatcccgaactgttaactttaactccaaatgtctatggtagaccaac 377  Q
    |||||||||||||| | ||| ||||| |||||| |||||| | || ||| |||||||    
T  52628892 ttgccaaataaatctc-aaccgttaagtttaaccccaaatatgtaaggtggaccaac 52628837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 222 - 392
Target Start/End: Original strand, 23091349 - 23091520
Alignment:
Q  222 ggcttatttgatcgaatggtccctcaaataatttcaagttttcattttggtcccacaattaataaaacgtatcttttggtccctcacttttttctccgtt 321  Q
    ||||||||||||| | |||||||  || ||||||||  |||||||||||||   |||||||||||||||||  |||||||| ||||||||||||||||||    
T  23091349 ggcttatttgatctattggtcccctaactaatttcacattttcattttggttttacaattaataaaacgtacgttttggtcactcacttttttctccgtt 23091448  T
Q  322 tgccaaataaatcccga-actgttaactttaactccaaatgtctatggtagaccaaccttaaaagtggtcca 392  Q
    ||||||||||||||| |  ||||||| |||||   |||||||||||||| ||||||| ||||||||||||||    
T  23091449 tgccaaataaatccctagtctgttaagtttaatctcaaatgtctatggtggaccaactttaaaagtggtcca 23091520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 212 - 434
Target Start/End: Complemental strand, 41874100 - 41873877
Alignment:
Q  212 aatttatttt-ggcttatttgatcgaatggtccctcaaataatttcaagttttcattttggtcccacaattaataaaacgtatcttttggtccctcactt 310  Q
    |||||||||| |||||||| |||| | ||||||||||| ||||||| | ||||||| |||||| || ||||||||||| ||||||||||| || | |  |    
T  41874100 aatttattttaggcttattagatccattggtccctcaattaatttccatttttcatcttggtctcataattaataaaaagtatcttttggccctttagct 41874001  T
Q  311 ttttctccgtttgccaaataaatcccgaactgttaactttaactccaaatgtctatggtagaccaaccttaaaagtggtccatcgtagaccttattaatt 410  Q
    ||| |||||||| ||||||||||||     |||||| ||||||  |||||||||||||| |||||||||||| ||||||||| | ||||| | |||||||    
T  41874000 tttcctccgtttaccaaataaatccttggttgttaagtttaaccacaaatgtctatggtggaccaaccttaagagtggtccaccatagacttcattaatt 41873901  T
Q  411 ttattaattttaacagttcgatct 434  Q
    || | ||||||||| ||| |||||    
T  41873900 ttttaaattttaaccgtttgatct 41873877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 222 - 335
Target Start/End: Original strand, 15071340 - 15071453
Alignment:
Q  222 ggcttatttgatcgaatggtccctcaaataatttcaagttttcattttggtcccacaattaataaaacgtatcttttggtccctcacttttttctccgtt 321  Q
    ||||||||| ||| | |||||||  ||||||||||||||||||||||||||| || |||||||||||||||| ||||||||||||||||||| |||||||    
T  15071340 ggcttatttaatccattggtcccctaaataatttcaagttttcattttggtcacataattaataaaacgtatgttttggtccctcactttttcctccgtt 15071439  T
Q  322 tgccaaataaatcc 335  Q
    | ||||||||||||    
T  15071440 taccaaataaatcc 15071453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 222 - 328
Target Start/End: Complemental strand, 34352074 - 34351968
Alignment:
Q  222 ggcttatttgatcgaatggtccctcaaataatttcaagttttcattttggtcccacaattaataaaacgtatcttttggtccctcacttttttctccgtt 321  Q
    ||||||||||||| ||| |||||| ||||||||| |||||||||||||||||||||||||||||||| ||| |||||||||||||||||||| || ||||    
T  34352074 ggcttatttgatccaatagtcccttaaataattttaagttttcattttggtcccacaattaataaaatgtaccttttggtccctcactttttcctacgtt 34351975  T
Q  322 tgccaaa 328  Q
    || ||||    
T  34351974 tgtcaaa 34351968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 247 - 408
Target Start/End: Original strand, 16123310 - 16123471
Alignment:
Q  247 aaataatttcaagttttcattttggtcccacaattaataaaacgtatcttttggtccctcacttttttctccgtttgccaaataaatcccgaactgttaa 346  Q
    ||||||||| |||||||||||||||| |||||||||||||||   |  |||| |||||||| |||||  |||||||||||||||||||||    ||||||    
T  16123310 aaataatttaaagttttcattttggttccacaattaataaaattcacgttttagtccctcattttttcttccgtttgccaaataaatccctggttgttaa 16123409  T
Q  347 ctttaactccaaatgtctatggtagaccaaccttaaaagtggtccatcgtagaccttattaa 408  Q
     |||||   |||||||||||||||||||||| ||||||||| |||| | || ||||||||||    
T  16123410 gtttaatctcaaatgtctatggtagaccaactttaaaagtgatccaccatataccttattaa 16123471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 250 - 335
Target Start/End: Complemental strand, 44278439 - 44278354
Alignment:
Q  250 taatttcaagttttcattttggtcccacaattaataaaacgtatcttttggtccctcacttttttctccgtttgccaaataaatcc 335  Q
    |||||||||||||||||||||||||||| ||||||||||||||  ||||||||||||| |||||||||||||||||||||| ||||    
T  44278439 taatttcaagttttcattttggtcccacgattaataaaacgtacgttttggtccctcatttttttctccgtttgccaaatagatcc 44278354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 250 - 438
Target Start/End: Original strand, 46467172 - 46467359
Alignment:
Q  250 taatttcaagttttcattttggtcccacaattaataaaacgtatcttttggtccctcacttttttctccgtttgccaaataaatcccgaactgttaactt 349  Q
    ||||||||||||||||||||||||||| || |||||||||  || ||| |||||||||  |||  ||||||||| ||||||||||||   ||||||| ||    
T  46467172 taatttcaagttttcattttggtcccataactaataaaactcatgtttcggtccctcaggtttgcctccgtttgtcaaataaatccctcgctgttaagtt 46467271  T
Q  350 taactccaaatgtctatggtagaccaaccttaaaagtggtccatcgtagaccttattaattttattaattttaacagttcgatctattt 438  Q
    ||||   ||||||||||||| ||||||| ||||||||| |||| ||||||  ||||||| ||| ||||||| ||| ||| ||| |||||    
T  46467272 taaccataaatgtctatggtggaccaacattaaaagtgatccaccgtagatgttattaaattt-ttaatttaaaccgtttgatatattt 46467359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 222 - 333
Target Start/End: Original strand, 52627513 - 52627625
Alignment:
Q  222 ggcttatttgatcgaatggtccctcaaataatttcaagttttcattttggtcccacaattaat-aaaacgtatcttttggtccctcacttttttctccgt 320  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||  |||||| || | | ||||| ||||||    
T  52627513 ggcttatttgatccaatggtccctcaaataatttcaagttttcattttggtcccacaattaataaaaacatacattttggacctttaatttttcctccgt 52627612  T
Q  321 ttgccaaataaat 333  Q
    |||||||| ||||    
T  52627613 ttgccaaaaaaat 52627625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 238 - 377
Target Start/End: Complemental strand, 24499757 - 24499619
Alignment:
Q  238 tggtccctcaaataatttcaagttttcattttggtcccacaattaataaaacgtatcttttggtccctcacttttttctccgtttgccaaataaatcccg 337  Q
    |||||||  ||||||||||||||||||||||||||| |||||||||||||||  |  ||||||||||||||||||| |||||||| |||||||||| |||    
T  24499757 tggtcccctaaataatttcaagttttcattttggtctcacaattaataaaactcacgttttggtccctcactttttcctccgtttaccaaataaat-ccg 24499659  T
Q  338 aactgttaactttaactccaaatgtctatggtagaccaac 377  Q
      |||| ||||||||   ||||||||||| || |||||||    
T  24499658 gtctgtcaactttaaactcaaatgtctattgtggaccaac 24499619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 250 - 438
Target Start/End: Complemental strand, 15746856 - 15746669
Alignment:
Q  250 taatttcaagttttcattttggtcccacaattaataaaacgtatcttttggtccctcacttttttctccgtttgccaaataaatcccgaactgttaactt 349  Q
    ||||||| | ||||||||||||||||| || |||||||||  || ||||||||||| | || | |||||||  | ||||||||||    |||||||| ||    
T  15746856 taatttccaattttcattttggtcccataagtaataaaactcatgttttggtcccttaattgtatctccgtcagtcaaataaatcatccactgttaagtt 15746757  T
Q  350 taactccaaatgtctatggtagaccaaccttaaaagtggtccatcgtagaccttattaattttattaattttaacagttcgatctattt 438  Q
    ||||| |||||||||||||| |||||| ||||| ||||||||| | |||| | ||||||| || |||||||||||  || |||||||||    
T  15746756 taacttcaaatgtctatggtggaccaatcttaagagtggtccaccatagatcctattaatctt-ttaattttaaccctttgatctattt 15746669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 222 - 334
Target Start/End: Original strand, 41872574 - 41872686
Alignment:
Q  222 ggcttatttgatcgaatggtccctcaaataatttcaagttttcattttggtcccacaattaataaaacgtatcttttggtccctcacttttttctccgtt 321  Q
    ||||||||||||| ||||||||||  | ||||||||| ||||||||||| ||  |||||||||||||||||  |||  ||| |||||||||| |||||||    
T  41872574 ggcttatttgatctaatggtcccttgattaatttcaacttttcattttgatcatacaattaataaaacgtacgtttaagtctctcactttttcctccgtt 41872673  T
Q  322 tgccaaataaatc 334  Q
    |||||||||||||    
T  41872674 tgccaaataaatc 41872686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 213 - 353
Target Start/End: Original strand, 50442614 - 50442753
Alignment:
Q  213 atttattttggcttatttgatcgaatggtccctcaaataatttcaagttttcattttggtcccacaattaataaaacgtatcttttggtccctcactttt 312  Q
    |||||||| ||||| ||||||| ||| |||||||||||||||| | ||||| ||||||||| ||||||||||||||||||  ||||| | |||||| |||    
T  50442614 atttatttaggctt-tttgatccaattgtccctcaaataattttatgtttttattttggtctcacaattaataaaacgtacattttgattcctcaccttt 50442712  T
Q  313 ttctccgtttgccaaataaatcccgaactgttaactttaac 353  Q
    | ||| ||||| ||||||||||    |||||||||||||||    
T  50442713 tcctctgtttgtcaaataaatctttgactgttaactttaac 50442753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 250 - 377
Target Start/End: Original strand, 44276148 - 44276274
Alignment:
Q  250 taatttcaagttttcattttggtcccacaattaataaaacgtatcttttggtccctcacttttttctccgtttgccaaataaatcccgaactgttaactt 349  Q
    ||||||| | |||||||||||||| || |||||||||||||||  ||||| ||| ||||||||||||| ||||| ||| ||||||| | |||||||| ||    
T  44276148 taatttccatttttcattttggtctcataattaataaaacgtacgttttgatccttcacttttttctctgtttgtcaattaaatcctg-actgttaagtt 44276246  T
Q  350 taactccaaatgtctatggtagaccaac 377  Q
    ||||  ||||||  |||||| |||||||    
T  44276247 taaccacaaatgcgtatggtggaccaac 44276274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 238 - 333
Target Start/End: Complemental strand, 51042444 - 51042350
Alignment:
Q  238 tggtccctcaaataatttcaagttttcattttggtcccacaattaataaaacgtatcttttggtccctcacttttttctccgtttgccaaataaat 333  Q
    |||||||| || ||||||| | ||||||||||||||||||||||||||||||  |  |||| |||||||  |||||||||||||||||||||||||    
T  51042444 tggtcccttaattaatttccaattttcattttggtcccacaattaataaaactcacgttttagtccctc-tttttttctccgtttgccaaataaat 51042350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 260 - 392
Target Start/End: Original strand, 49801653 - 49801786
Alignment:
Q  260 ttttcattttggtcccacaattaataaaacgtatcttttggtccctcacttttttctccgtttgccaaataaatcccgaactgttaactttaactccaa- 358  Q
    |||||||||||||||||||||||||||||    | ||||| |||||||| ||| |||| |||||||||||||||||   |||||||| ||||||  |||     
T  49801653 ttttcattttggtcccacaattaataaaaatggtgttttgatccctcacgtttgtctctgtttgccaaataaatcc--gactgttaattttaacctcaaa 49801750  T
Q  359 --atgtctatggtagaccaaccttaaaagtggtcca 392  Q
      |||| || |||| |||||||||||||||||||||    
T  49801751 tgatgtttacggtaaaccaaccttaaaagtggtcca 49801786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 341 - 434
Target Start/End: Original strand, 48527651 - 48527744
Alignment:
Q  341 tgttaactttaactccaaatgtctatggtagaccaaccttaaaagtggtccatcgtagaccttattaattttattaattttaacagttcgatct 434  Q
    ||||||||||||||||||||||||||||| ||||||| |||| ||||||||| | |||| ||||| |||| | ||||||| ||| ||| |||||    
T  48527651 tgttaactttaactccaaatgtctatggtcgaccaactttaagagtggtccaccatagatcttatcaattattttaatttaaactgtttgatct 48527744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 217 - 410
Target Start/End: Original strand, 15232745 - 15232939
Alignment:
Q  217 attttggcttatttgatcgaatggtccctcaaataatttcaagttttcattttggtcccacaattaataaaacgtatcttttggtccctcacttttttct 316  Q
    |||| |||||||| ||||   |||||||| |  |||||||| |||||||||||||||||| |||||||||||      |||| ||||||||| |||| ||    
T  15232745 atttaggcttattagatcatttggtcccttatttaatttcatgttttcattttggtcccataattaataaaaatggcgttttagtccctcacattttcct 15232844  T
Q  317 ccgtttgccaaataaatcccgaactgttaactttaactccaa--atgtctatggtagaccaaccttaaaagtggtccatcgtagaccttattaatt 410  Q
    | ||||||||||||||||  | || ||||| |||||| | ||  |||| ||| || ||||||| |||||||||||||||| |||| | ||||||||    
T  15232845 ctgtttgccaaataaatcatg-accgttaagtttaacccaaatgatgtatatagtggaccaactttaaaagtggtccatcatagatcctattaatt 15232939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 303 - 410
Target Start/End: Complemental strand, 44999499 - 44999392
Alignment:
Q  303 cctcacttttttctccgtttgccaaataaatcccgaactgttaactttaactccaaatgtctatggtagaccaaccttaaaagtggtccatcgtagacct 402  Q
    ||||| ||||| ||| |||||||||||||||||| | ||||||||||||||   ||||||||||||| |||||| | ||| |||||| || | |||| ||    
T  44999499 cctcattttttcctctgtttgccaaataaatccctagctgttaactttaaccttaaatgtctatggtggaccaatcgtaagagtggttcaccatagatct 44999400  T
Q  403 tattaatt 410  Q
    ||||||||    
T  44999399 tattaatt 44999392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 258 - 424
Target Start/End: Complemental strand, 30535751 - 30535586
Alignment:
Q  258 agttttcattttggtcccacaattaataaaacgtatcttttggtccctcacttttttctccgtttgccaaataaatcccgaactgttaactttaactcca 357  Q
    ||||||||||||||| ||| ||||||||||||  |  |||| || |||||  | |  ||||||||| |||||||||||  | || ||||||||| || ||    
T  30535751 agttttcattttggttccataattaataaaaccaacgttttagttcctcaaatctaactccgtttgtcaaataaatccacatctattaactttagcttca 30535652  T
Q  358 aatgtctatggtagaccaaccttaaaagtggtccatcgtagaccttattaattttattaattttaac 424  Q
    |||||||||||| ||||||| ||| |  | ||||| | ||||||||||| ||||| |||||||||||    
T  30535651 aatgtctatggtggaccaacattatagatagtccaccatagaccttatttatttt-ttaattttaac 30535586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 5 - 87
Target Start/End: Original strand, 31587130 - 31587212
Alignment:
Q  5 gacggtggtatggagcacaacactcgtcgcaccaccaactcctgtttctacatcgtaatgattgtgtttggatatggggagcg 87  Q
    |||||| ||| |||| ||||| ||||||| ||||||| ||||||| |||||||||| ||| ||| ||||||||||||||||||    
T  31587130 gacggtagtacggagaacaactctcgtcgtaccaccatctcctgtgtctacatcgtgatgtttgagtttggatatggggagcg 31587212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 340 - 421
Target Start/End: Original strand, 48492844 - 48492925
Alignment:
Q  340 ctgttaacttt-aactccaaatgtctatggtagaccaaccttaaaagtggtccatcgtagaccttattaattttattaatttt 421  Q
    ||||||||||| ||||||||||||||||||| ||||||| ||| || ||||||| |||||| |||||||||||| ||||||||    
T  48492844 ctgttaacttttaactccaaatgtctatggtggaccaacattataa-tggtccaccgtagatcttattaattttgttaatttt 48492925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 250 - 367
Target Start/End: Complemental strand, 46318707 - 46318590
Alignment:
Q  250 taatttcaagttttcattttggtcccacaattaataaaacgtatcttttggtccctcacttttttctccgtttgccaaataaatcccgaactgttaactt 349  Q
    |||||||||||||| ||||| |||||| || ||||||||   || ||||||||||||| || | ||||||| || |||||||||||    ||||||| ||    
T  46318707 taatttcaagttttgatttttgtcccataactaataaaagtcatgttttggtccctcaattgtatctccgtctgtcaaataaatccttggctgttaagtt 46318608  T
Q  350 taactccaaatgtctatg 367  Q
    |||| |||||||||||||    
T  46318607 taaccccaaatgtctatg 46318590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 250 - 390
Target Start/End: Complemental strand, 48097121 - 48096982
Alignment:
Q  250 taatttcaagttttcattttggtcccacaattaataaaacgtatcttttggtccctcacttttttctccgtttgccaaataaatcccgaactgttaactt 349  Q
    ||||||| | |||| |||||||||||| || |||||||||  || |||| |||||| |  ||| |||||||  | |||||||||||| | ||||||| ||    
T  48097121 taatttccaatttttattttggtcccataactaataaaactcatgttttagtcccttaggtttgtctccgtcggtcaaataaatcccta-ctgttaagtt 48097023  T
Q  350 taactccaaatgtctatggtagaccaaccttaaaagtggtc 390  Q
    ||||  ||||||| |||||| |||||||||||| |||||||    
T  48097022 taacctcaaatgtatatggtggaccaaccttaagagtggtc 48096982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 222 - 288
Target Start/End: Complemental strand, 33369313 - 33369247
Alignment:
Q  222 ggcttatttgatcgaatggtccctcaaataatttcaagttttcattttggtcccacaattaataaaa 288  Q
    ||||||||||||| ||||||| |  || ||||||||||| ||||||||||||||| |||||||||||    
T  33369313 ggcttatttgatccaatggtctcctaattaatttcaagtattcattttggtcccataattaataaaa 33369247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 241 - 307
Target Start/End: Complemental strand, 42245986 - 42245920
Alignment:
Q  241 tccctcaaataatttcaagttttcattttggtcccacaattaataaaacgtatcttttggtccctca 307  Q
    ||||| || |||||||||||||| |||||||| ||| ||||||||||||  ||||||||||||||||    
T  42245986 tcccttaattaatttcaagtttttattttggttccataattaataaaactcatcttttggtccctca 42245920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 371 - 424
Target Start/End: Complemental strand, 51300229 - 51300176
Alignment:
Q  371 gaccaaccttaaaagtggtccatcgtagaccttattaattttattaattttaac 424  Q
    ||||||| |||||||||||||| | ||||||||||||||||||| |||||||||    
T  51300229 gaccaacattaaaagtggtccaccatagaccttattaattttatgaattttaac 51300176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 344 - 420
Target Start/End: Complemental strand, 13147412 - 13147336
Alignment:
Q  344 taactttaactccaaatgtctatggtagaccaaccttaaaagtggtccatcgtagaccttattaattttattaattt 420  Q
    |||||||||  ||||||||||||||| |||||||||||| ||||||||| | |||| | |||||||| | |||||||    
T  13147412 taactttaatcccaaatgtctatggtggaccaaccttaatagtggtccaccatagatcctattaattattttaattt 13147336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 340 - 408
Target Start/End: Complemental strand, 16757524 - 16757456
Alignment:
Q  340 ctgttaactttaactccaaatgtctatggtagaccaaccttaaaagtggtccatcgtagaccttattaa 408  Q
    ||||||||||||||  |||||||||| | | ||||||| ||| |||||||||||| |||||||||||||    
T  16757524 ctgttaactttaaccacaaatgtctaagatggaccaacattataagtggtccatcatagaccttattaa 16757456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 342 - 420
Target Start/End: Complemental strand, 9226213 - 9226135
Alignment:
Q  342 gttaactttaactccaaatgtctatggtagaccaaccttaaaagtggtccatcgtagaccttattaattttattaattt 420  Q
    ||||| ||||||  |||||||||||||| || ||||||||||||||||||| | |||| | |||||||| | |||||||    
T  9226213 gttaaatttaacctcaaatgtctatggtggatcaaccttaaaagtggtccaccatagatcctattaattattttaattt 9226135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 343 - 420
Target Start/End: Complemental strand, 6049422 - 6049345
Alignment:
Q  343 ttaactttaactccaaatgtctatggtagaccaaccttaaaagtggtccatcgtagaccttattaattttattaattt 420  Q
    ||||||| ||||||||||||||||||| |||||| || || ||||||||| |||||| | | |||||| | |||||||    
T  6049422 ttaacttcaactccaaatgtctatggtggaccaatctaaatagtggtccaccgtagatcctgttaattattttaattt 6049345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 260 - 420
Target Start/End: Complemental strand, 16965207 - 16965045
Alignment:
Q  260 ttttcattttggtcccacaattaataaaacgtatcttttggtccctcacttttttctccgtttgccaaataaatcccgaactgttaactttaactccaa- 358  Q
    |||||||||||||||||||||||||||||   |  |||| |||||| || ||||  |||||||  ||||||||| ||| |  ||||| |||||| ||||     
T  16965207 ttttcattttggtcccacaattaataaaaatgacgttttagtcccttacattttcttccgtttatcaaataaattccg-atggttaagtttaaccccaaa 16965109  T
Q  359 --atgtctatggtagaccaaccttaaaagtggtccatcgtagaccttattaattttattaattt 420  Q
      |||| |||||| ||||||| |||| ||||||||| | |||| | |||||||| | |||||||    
T  16965108 tgatgtatatggtggaccaactttaagagtggtccaccatagatcctattaattattttaattt 16965045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 340 - 392
Target Start/End: Complemental strand, 3617497 - 3617445
Alignment:
Q  340 ctgttaactttaactccaaatgtctatggtagaccaaccttaaaagtggtcca 392  Q
    ||||||||||||||  ||||||||||||||  ||||||||||| |||||||||    
T  3617497 ctgttaactttaacctcaaatgtctatggtgaaccaaccttaagagtggtcca 3617445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 250 - 305
Target Start/End: Original strand, 42244657 - 42244712
Alignment:
Q  250 taatttcaagttttcattttggtcccacaattaataaaacgtatcttttggtccct 305  Q
    ||||||||| ||||||||||| ||||| ||||||||||||  || |||||||||||    
T  42244657 taatttcaaattttcattttgatcccataattaataaaactcatgttttggtccct 42244712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 342 - 412
Target Start/End: Original strand, 21507183 - 21507253
Alignment:
Q  342 gttaactttaactccaaatgtctatggtagaccaaccttaaaagtggtccatcgtagaccttattaatttt 412  Q
    ||||||||||| ||||||||| |  ||| |||||||  |  | ||||||||||||||||||||||||||||    
T  21507183 gttaactttaattccaaatgtattaggtggaccaacaatgtaggtggtccatcgtagaccttattaatttt 21507253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 341 - 423
Target Start/End: Complemental strand, 32693407 - 32693325
Alignment:
Q  341 tgttaactttaactccaaatgtctatggtagaccaaccttaaaagtggtccatcgtagaccttattaattttattaattttaa 423  Q
    |||||||||||||  |||||||||| ||| ||||||| |||   || | ||||||||||||||||||| ||| |||| |||||    
T  32693407 tgttaactttaaccacaaatgtctagggtggaccaacattattcgtagcccatcgtagaccttattaaatttcttaaatttaa 32693325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 333 - 434
Target Start/End: Original strand, 12665900 - 12666000
Alignment:
Q  333 tcccgaactgttaactttaactccaaatgtctatggtagaccaaccttaaaagtggtccatcgtagaccttattaattttattaattttaacagttcgat 432  Q
    |||| ||| ||||||||||||  ||||||| ||||||  |||| | |||| ||||||||| | |||| |||||||||||| ||||||| ||| ||| |||    
T  12665900 tccctaaccgttaactttaacctcaaatgtttatggtgaaccatc-ttaagagtggtccaccatagatcttattaattttgttaatttaaaccgtttgat 12665998  T
Q  433 ct 434  Q
    ||    
T  12665999 ct 12666000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 317 - 390
Target Start/End: Complemental strand, 18821762 - 18821689
Alignment:
Q  317 ccgtttgccaaataaatcccgaactgttaactttaactccaaatgtctatggtagaccaaccttaaaagtggtc 390  Q
    ||||| |||||||  ||||  ||| |||| |||||||| |||||||||||||| ||| |||||||| |||||||    
T  18821762 ccgttagccaaattgatccataaccgttatctttaacttcaaatgtctatggtggactaaccttaagagtggtc 18821689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 338 - 410
Target Start/End: Original strand, 51445703 - 51445776
Alignment:
Q  338 aactgttaactttaactcc-aaatgtctatggtagaccaaccttaaaagtggtccatcgtagaccttattaatt 410  Q
    |||||||||||||||| || ||||||||||||| || |||| |||||| ||||||| | |||| | ||||||||    
T  51445703 aactgttaactttaacccccaaatgtctatggtggatcaactttaaaaatggtccaccatagatcctattaatt 51445776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 342 - 394
Target Start/End: Original strand, 10711906 - 10711958
Alignment:
Q  342 gttaactttaactccaaatgtctatggtagaccaaccttaaaagtggtccatc 394  Q
    ||||||||||||  ||||| |||||| ||||||||||| || |||||||||||    
T  10711906 gttaactttaacctcaaatatctatgatagaccaacctaaagagtggtccatc 10711958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 372 - 424
Target Start/End: Original strand, 50442752 - 50442804
Alignment:
Q  372 accaaccttaaaagtggtccatcgtagaccttattaattttattaattttaac 424  Q
    |||||| |||| ||| |||||||||||||  ||||||||||| ||||||||||    
T  50442752 accaactttaagagtagtccatcgtagactgtattaattttaataattttaac 50442804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 124; Significance: 2e-63; HSPs: 47)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 124; E-Value: 2e-63
Query Start/End: Original strand, 218 - 445
Target Start/End: Complemental strand, 32470697 - 32470471
Alignment:
Q  218 ttttggcttatttgatcgaatggtccctcaaataatttcaagttttcattttggtcccacaattaataaaacgtatcttttggtccctcacttttttctc 317  Q
    ||||||||||||||||| | | |||||  ||||||||||||||||| ||||||||||||||||||||||||||||  |||  || |||||  |||| |||    
T  32470697 ttttggcttatttgatccattagtcccctaaataatttcaagtttttattttggtcccacaattaataaaacgtacgtttaagttcctcatgttttcctc 32470598  T
Q  318 cgtttgccaaataaatcccgaactgttaactttaactccaaatgtctatggtagaccaaccttaaaagtggtccatcgtagaccttattaattttattaa 417  Q
    |||||| |||||||||||||  ||||||| |||||||||||||||||||||| ||  |||||||||| ||||||||||||||||||||||||||| ||||    
T  32470597 cgtttgtcaaataaatcccgg-ctgttaagtttaactccaaatgtctatggtggataaaccttaaaaatggtccatcgtagaccttattaattttgttaa 32470499  T
Q  418 ttttaacagttcgatctatttatcataa 445  Q
    |||||||  |||||||||||||||||||    
T  32470498 ttttaaccattcgatctatttatcataa 32470471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 121; E-Value: 1e-61
Query Start/End: Original strand, 222 - 420
Target Start/End: Original strand, 43033080 - 43033277
Alignment:
Q  222 ggcttatttgatcgaatggtccctcaaataatttcaagttttcattttggtcccacaattaataaaacgtatcttttggtccctcacttttttctccgtt 321  Q
    ||||||||||||| |||| ||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||    
T  43033080 ggcttatttgatccaatgatcccttaaataatttcaagttttcattttggtcccacaattaataaaacgtaccttttggtccctcactttttcctccgtt 43033179  T
Q  322 tgccaaataaatcc-cgaactgttaactttaactccaaatgtctatggtagaccaaccttaaaagtggtccatcgtagaccttattaattttattaattt 420  Q
    |||||||||||||| |||  |||||| ||||||  ||||||||||||||||||||||||||| ||||||||| | || ||| |||||||| | |||||||    
T  43033180 tgccaaataaatcctcga--tgttaagtttaacctcaaatgtctatggtagaccaaccttaagagtggtccaccataaaccctattaattattttaattt 43033277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 119; E-Value: 2e-60
Query Start/End: Original strand, 215 - 413
Target Start/End: Complemental strand, 17460809 - 17460612
Alignment:
Q  215 ttattttggcttatttgatcgaatggtccctcaaataatttcaagttttcattttggtcccacaattaataaaacgtatcttttggtccctcactttttt 314  Q
    |||||||||||||||||||| ||||||||   || ||||||||||||||||||||| |||||||||||||||||||||  |||||||||||||  ||||     
T  17460809 ttattttggcttatttgatccaatggtcctctaattaatttcaagttttcattttgatcccacaattaataaaacgtacgttttggtccctcaaattttc 17460710  T
Q  315 ctccgtttgccaaataaatcccgaactgttaactttaactccaaatgtctatggtagaccaaccttaaaagtggtccatcgtagaccttattaatttta 413  Q
    |||||||| |||||||||||||| || |||||||||||||  ||||||||||||| |||||| ||||||||||||| ||||||||||||||||||||||    
T  17460709 ctccgtttcccaaataaatcccg-accgttaactttaactttaaatgtctatggtggaccaatcttaaaagtggtctatcgtagaccttattaatttta 17460612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 238 - 413
Target Start/End: Original strand, 11315947 - 11316121
Alignment:
Q  238 tggtccctcaaataatttcaagttttcattttggtcccacaattaataaaacgtatcttttggtccctcacttttttctccgtttgccaaataaatcccg 337  Q
    |||||||  ||||||||||||||||||||||||||||||||||||||||||||||  |||  ||||||||  |||| |||||||||||||||||||||||    
T  11315947 tggtcccctaaataatttcaagttttcattttggtcccacaattaataaaacgtacgtttaagtccctcaggttttcctccgtttgccaaataaatcccg 11316046  T
Q  338 aactgttaactttaactccaaatgtctatggtagaccaaccttaaaagtggtccatcgtagaccttattaatttta 413  Q
      ||||||| ||||| |||||||||||||||| || ||||||||||| ||||||| ||||||||||||||||||||    
T  11316047 -gctgttaagtttaattccaaatgtctatggtggatcaaccttaaaaatggtccaccgtagaccttattaatttta 11316121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 100; E-Value: 4e-49
Query Start/End: Original strand, 220 - 420
Target Start/End: Complemental strand, 11317488 - 11317287
Alignment:
Q  220 ttggcttatttgatcgaatggtccctcaaataatttcaagttttcattttggtcccacaattaataaaacgtatcttttggtccctcacttttttctccg 319  Q
    ||||||||||||||  ||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||| ||||||||||||| ||||| |||||    
T  11317488 ttggcttatttgattcaatggtccctcaaataatttcaaattttcattttggtcccacaattaataaaacatatattttggtccctcaatttttcctccg 11317389  T
Q  320 tttgccaaataaatcccgaactgttaactttaactccaa--atgtctatggtagaccaaccttaaaagtggtccatcgtagaccttattaattttattaa 417  Q
    |||| ||||||||| ||  || ||||| |||||||| ||  |||||||||||||||||||||||| ||||||| | | |||| | |||||||| | ||||    
T  11317388 tttggcaaataaat-cctcacagttaagtttaactcaaatgatgtctatggtagaccaaccttaagagtggtctaccatagatcctattaattattttaa 11317290  T
Q  418 ttt 420  Q
    |||    
T  11317289 ttt 11317287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 96; E-Value: 9e-47
Query Start/End: Original strand, 250 - 445
Target Start/End: Original strand, 1083014 - 1083208
Alignment:
Q  250 taatttcaagttttcattttggtcccacaattaataaaacgtatcttttggtccctcacttttttctccgtttgccaaataaatcccgaactgttaactt 349  Q
    ||||||||  ||||||||||||||||||| |||||||||    | ||||||||| |||  |||||||||||||||||| |||||||| || |||||||||    
T  1083014 taatttcatattttcattttggtcccacatttaataaaaatggtgttttggtccgtcatctttttctccgtttgccaattaaatccc-aagtgttaactt 1083112  T
Q  350 taactccaaatgtctatggtagaccaaccttaaaagtggtccatcgtagaccttattaattttattaattttaacagttcgatctatttatcataa 445  Q
    |||||| |||| |||||||| || ||||||||||||||||| || |||||||||||||||||| |||||||||||  |||||||||||||| ||||    
T  1083113 taactctaaatatctatggtggatcaaccttaaaagtggtctattgtagaccttattaattttgttaattttaaccattcgatctatttattataa 1083208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 91; E-Value: 8e-44
Query Start/End: Original strand, 222 - 408
Target Start/End: Complemental strand, 28562927 - 28562742
Alignment:
Q  222 ggcttatttgatcgaatggtccctcaaataatttcaagttttcattttggtcccacaattaataaaacgtatcttttggtccctcacttttttctccgtt 321  Q
    ||||||||||||  ||||||||||||||||||||||| ||||||||||||||||| |||||||||||| || |||||||||||||||||||| |||||||    
T  28562927 ggcttatttgattcaatggtccctcaaataatttcaaattttcattttggtcccataattaataaaacataccttttggtccctcactttttcctccgtt 28562828  T
Q  322 tgccaaataaatcccgaactgttaactttaactccaaatgtctatggtagaccaaccttaaaagtggtccatcgtagaccttattaa 408  Q
    || ||||||||||| | |||||||| |||||  |||||| | |||||| ||||||| ||| |  | ||||| | |||||||||||||    
T  28562827 tgtcaaataaatccag-actgttaagtttaatcccaaatatatatggtggaccaacattatagatagtccaccatagaccttattaa 28562742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 225 - 411
Target Start/End: Complemental strand, 43034586 - 43034399
Alignment:
Q  225 ttatttgatcgaatggtccctcaaataatttcaagttttcattttggtcccacaattaataaaacgtatcttttggtccctcacttttttctccgtttgc 324  Q
    |||||||||  ||||||||||||||||||||||||||||||||||  || |||||||||||||||||| |||||||||||||||||||| |||||||||     
T  43034586 ttatttgattcaatggtccctcaaataatttcaagttttcattttaatctcacaattaataaaacgtaccttttggtccctcactttttcctccgtttgt 43034487  T
Q  325 caaataaatc-ccgaactgttaactttaa-ctc-caaatgtctatggtagaccaaccttaaaagtggtccatcgtagaccttattaattt 411  Q
    ||||||||||  ||  ||||||| ||||| ||| |||||||||||||| || |||| |||| ||||||||| | |||| | |||||||||    
T  43034486 caaataaatcttcg--ctgttaagtttaacctctcaaatgtctatggtggatcaactttaagagtggtccaccatagatcctattaattt 43034399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 295 - 459
Target Start/End: Original strand, 6028787 - 6028952
Alignment:
Q  295 ttttggtccctcacttttttctccgtttgccaaataaatcccgaactgttaactttaactccaaatgtctatggtagaccaaccttaaaagtggtccatc 394  Q
    |||||||||||||  ||||||| ||||||||||||||||  |  || |||||||||||||| |||||| |||||| |||||  |||||||||||||||||    
T  6028787 ttttggtccctcaagtttttcttcgtttgccaaataaatttccgacggttaactttaactctaaatgtatatggtggaccagtcttaaaagtggtccatc 6028886  T
Q  395 gtagaccttattaattttattaattttaacagttcgatctatttatcataata-ggaccgttagat 459  Q
    |||||||||| ||||||| |||||||||||  |||||||||||||| |||| | ||||||||||||    
T  6028887 gtagaccttaataattttgttaattttaaccattcgatctatttatgataaaagggaccgttagat 6028952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 222 - 335
Target Start/End: Complemental strand, 7437879 - 7437766
Alignment:
Q  222 ggcttatttgatcgaatggtccctcaaataatttcaagttttcattttggtcccacaattaataaaacgtatcttttggtccctcacttttttctccgtt 321  Q
    ||||||||||||| ||||||  |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||| |||||||    
T  7437879 ggcttatttgatccaatggttgctcaaataatttcaagttttcattttggtcccacaattaataaaacgtatattttggtccctcaatttttcctccgtt 7437780  T
Q  322 tgccaaataaatcc 335  Q
    | | ||||||||||    
T  7437779 tacaaaataaatcc 7437766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 222 - 387
Target Start/End: Original strand, 17459251 - 17459418
Alignment:
Q  222 ggcttatttgatcgaatggtccctcaaataatttcaagttttcattttggtcccacaattaataaaacgtatcttttggtccctcacttttttctccgtt 321  Q
    ||||||||||||| | | |||||| ||||||||||||||||||||||||||| ||||||||||||||||||  |||  |||||||||||||| |||||||    
T  17459251 ggcttatttgatccattagtcccttaaataatttcaagttttcattttggtcacacaattaataaaacgtacgtttaagtccctcactttttcctccgtt 17459350  T
Q  322 tgccaaataaatcccgaactgttaactttaactccaa---atgtctatggtagaccaaccttaaaagtg 387  Q
    |||||||||||| | | ||| |||| |||||| ||||   ||||||||||| ||| || ||||||||||    
T  17459351 tgccaaataaattctg-acttttaagtttaaccccaaatgatgtctatggtggacgaatcttaaaagtg 17459418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 218 - 411
Target Start/End: Original strand, 7436461 - 7436652
Alignment:
Q  218 ttttggcttatttgatcgaatggtccctcaaataatttcaagttttcattttggtcccacaattaataaaacgtatcttttggtccctcacttttttctc 317  Q
    ||||||| ||||||||| |||||||||||||||||||||||||||| |||||||||| |||||||||||||  || |||||||| ||||| |||||  ||    
T  7436461 ttttggcgtatttgatccaatggtccctcaaataatttcaagtttttattttggtcctacaattaataaaatataccttttggt-cctcaatttttcttc 7436559  T
Q  318 cgtttgccaaataaatcccgaactgttaactttaactccaaatgtctatggtagaccaaccttaaaagtggtccatcgtagaccttattaattt 411  Q
    |||||| ||||||||| || ||| ||||| | |||| |||||||| ||||||  |||||| ||  |  | ||||||||||||| ||||||||||    
T  7436560 cgtttgtcaaataaat-cctaacagttaagtctaaccccaaatgtatatggtgaaccaacattgtagatagtccatcgtagactttattaattt 7436652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 224 - 333
Target Start/End: Original strand, 28561368 - 28561477
Alignment:
Q  224 cttatttgatcgaatggtccctcaaataatttcaagttttcattttggtcccacaattaataaaacgtatcttttggtccctcacttttttctccgtttg 323  Q
    ||||||||||  |||||||||| ||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||| |||| || ||||||    
T  28561368 cttatttgattcaatggtcccttaaataattttaagttttcattttggtctcacaattaataaaacgtatcttttggtccctcaccttttcctacgtttg 28561467  T
Q  324 ccaaataaat 333  Q
     |||||||||    
T  28561468 tcaaataaat 28561477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 222 - 335
Target Start/End: Original strand, 32469146 - 32469260
Alignment:
Q  222 ggcttatttgatcgaatggtccctcaaataatttcaagttttcattttggtcccacaattaataaaac--gtatcttttggtccctcacttttttctccg 319  Q
    ||||||||||||  ||||||||||||||||||||||||||||||||||| ||||||||||||||||||  ||| |||||||||| ||||||||| |||||    
T  32469146 ggcttatttgattcaatggtccctcaaataatttcaagttttcattttgatcccacaattaataaaacgtgtaccttttggtccttcactttttcctccg 32469245  T
Q  320 tttgccaaataaatcc 335  Q
     |||||||||||||||    
T  32469246 -ttgccaaataaatcc 32469260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 250 - 420
Target Start/End: Original strand, 29219411 - 29219583
Alignment:
Q  250 taatttcaagttttcattttggtcccacaattaataaaacgtatcttttggtccctcacttttttctccgtttgccaaataaatcccgaactgttaactt 349  Q
    |||||||| ||||||||||||||||||||||||||||||      |||| ||||||||| |||| |||||||||||||||||||||| ||||||||| ||    
T  29219411 taatttcatgttttcattttggtcccacaattaataaaaatggcgttttagtccctcaccttttcctccgtttgccaaataaatccc-aactgttaagtt 29219509  T
Q  350 taactccaa---atgtctatggtagaccaaccttaaaagtggtccatcgtagaccttattaattttattaattt 420  Q
    |||| ||||   ||||||||||| |||||| ||||||||||||||| | |||| | |||||||| | |||||||    
T  29219510 taaccccaaatgatgtctatggtggaccaatcttaaaagtggtccaccatagatcctattaattattttaattt 29219583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 250 - 420
Target Start/End: Original strand, 29332710 - 29332882
Alignment:
Q  250 taatttcaagttttcattttggtcccacaattaataaaacgtatcttttggtccctcacttttttctccgtttgccaaataaatcccgaactgttaactt 349  Q
    |||||||| ||||||||||||||||||||||||||||||      |||| ||||||||| |||| |||||||||||||||||||||| ||||||||| ||    
T  29332710 taatttcatgttttcattttggtcccacaattaataaaaatggcgttttagtccctcaccttttcctccgtttgccaaataaatccc-aactgttaagtt 29332808  T
Q  350 taactccaa---atgtctatggtagaccaaccttaaaagtggtccatcgtagaccttattaattttattaattt 420  Q
    |||| ||||   ||||||||||| |||||| ||||||||||||||| | |||| | |||||||| | |||||||    
T  29332809 taaccccaaatgatgtctatggtggaccaatcttaaaagtggtccaccatagatcctattaattattttaattt 29332882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 225 - 335
Target Start/End: Complemental strand, 42641975 - 42641866
Alignment:
Q  225 ttatttgatcgaatggtccctcaaataatttcaagttttcattttggtcccacaattaataaaacgtatcttttggtccctcacttttttctccgtttgc 324  Q
    |||||||||  ||||||||||||||||||||||| |||| |||||||||||| ||||||||||||| | ||||||||||| ||||||||| |||||||||    
T  42641975 ttatttgattcaatggtccctcaaataatttcaaatttttattttggtcccataattaataaaacgcaccttttggtcccccactttttt-tccgtttgc 42641877  T
Q  325 caaataaatcc 335  Q
    |||||||||||    
T  42641876 caaataaatcc 42641866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 251 - 445
Target Start/End: Complemental strand, 6032403 - 6032209
Alignment:
Q  251 aatttcaagttttcattttggtcccacaattaataaaacgtatcttttggtccctcacttttttctccgtttgccaaataaatcccgaactgttaacttt 350  Q
    ||||||| ||||| |||||||| |||||||||||||||    | |||| |||||  | ||||| ||| |||||||||||||||||   || |||||||||    
T  6032403 aatttcatgtttttattttggttccacaattaataaaaatggtgttttagtcccgtattttttcctctgtttgccaaataaatccatgaccgttaacttt 6032304  T
Q  351 aactccaaatgtctatggtagaccaaccttaaaagtggtccatcgtagaccttattaattttattaattttaacagttcgatctatttatcataa 445  Q
    |||| |||||||||||||| ||||||| | | |  || ||||||||||||||||||||||| |||||||||| | ||| ||||| || |||||||    
T  6032303 aacttcaaatgtctatggttgaccaacataagacatgatccatcgtagaccttattaatttaattaattttagccgtttgatcttttaatcataa 6032209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 214 - 434
Target Start/End: Complemental strand, 6030597 - 6030375
Alignment:
Q  214 tttatttt-ggcttatttgatcgaatggtccctcaaataatttcaagttttcattttggtcccacaattaataaaacgtatcttttggtccctcactttt 312  Q
    |||||||| ||||||||||||| ||| |||||||||||||||| |||||||||||||| ||||||||||||| ||| |||  ||||| ||| |||  |||    
T  6030597 tttattttaggcttatttgatccaatagtccctcaaataatttgaagttttcattttgatcccacaattaattaaaagtacgttttgatccttcatattt 6030498  T
Q  313 ttctccgtttgccaaataaatcccgaactgttaactttaactccaa--atgtctatggtagaccaaccttaaaagtggtccatcgtagaccttattaatt 410  Q
    | |||  ||||||||||||||| | ||| |||||||||||| | ||  ||||||| ||| |||||||||||| |||| || | | |||| | |||||||     
T  6030497 tcctctatttgccaaataaatctc-aacagttaactttaacccaaatgatgtctacggtggaccaaccttaagagtgatctaccatagatcctattaata 6030399  T
Q  411 ttattaattttaacagttcgatct 434  Q
    || ||||||| ||| ||| |||||    
T  6030398 tttttaatttaaaccgtttgatct 6030375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 250 - 420
Target Start/End: Complemental strand, 18617096 - 18616924
Alignment:
Q  250 taatttcaagttttcattttggtcccacaattaataaaacgtatcttttggtccctcacttttttctccgtttgccaaataaatcccgaactgttaactt 349  Q
    |||||||| ||||||||||||||||||||||||||||||      |||| ||||||||| |||| |||||||||||||||||||||| |||| |||| ||    
T  18617096 taatttcatgttttcattttggtcccacaattaataaaaatggcgttttagtccctcaccttttcctccgtttgccaaataaatccc-aactattaagtt 18616998  T
Q  350 taactccaa---atgtctatggtagaccaaccttaaaagtggtccatcgtagaccttattaattttattaattt 420  Q
    |||| ||||   ||||||||||| |||||  ||||||||||||||| | |||| | |||||||| | |||||||    
T  18616997 taaccccaaatgatgtctatggtggaccagtcttaaaagtggtccaccatagatcctattaattattttaattt 18616924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 215 - 413
Target Start/End: Complemental strand, 29221001 - 29220804
Alignment:
Q  215 ttattttggcttatttgatcgaatggtccctcaaataatttcaagttttcattttggtcccacaattaataaaacgtatcttttggtccctcactttttt 314  Q
    |||| |||||||||| |||||  |||||||| |  ||||||||  |||||||||||||||||||||||||||||      |||| |||||| || ||||     
T  29221001 ttatattggcttattagatcgtttggtcccttatttaatttcatattttcattttggtcccacaattaataaaaatggctttttagtcccttacattttc 29220902  T
Q  315 ctccgtttgccaaataaatcccgaactgttaactttaactccaaatgtctatggtagaccaaccttaaaagtggtccatcgtagaccttattaatttta 413  Q
    ||| ||||||||||| |||||||| ||||||| ||||| |  |||| | |||||| ||| ||||||||||| | |||||||||| ||||||||||||||    
T  29220901 ctctgtttgccaaattaatcccga-ctgttaattttaattttaaatatttatggtggacgaaccttaaaagcgatccatcgtaggccttattaatttta 29220804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 215 - 413
Target Start/End: Complemental strand, 29334300 - 29334103
Alignment:
Q  215 ttattttggcttatttgatcgaatggtccctcaaataatttcaagttttcattttggtcccacaattaataaaacgtatcttttggtccctcactttttt 314  Q
    |||| |||||||||| |||||  |||||||| |  ||||||||  |||||||||||||||||||||||||||||      |||| |||||| || ||||     
T  29334300 ttatattggcttattagatcgtttggtcccttatttaatttcatattttcattttggtcccacaattaataaaaatggctttttagtcccttacattttc 29334201  T
Q  315 ctccgtttgccaaataaatcccgaactgttaactttaactccaaatgtctatggtagaccaaccttaaaagtggtccatcgtagaccttattaatttta 413  Q
    ||| ||||||||||| |||||||| ||||||| ||||| |  |||| | |||||| ||| ||||||||||| | |||||||||| ||||||||||||||    
T  29334200 ctctgtttgccaaattaatcccga-ctgttaattttaattttaaatatttatggtggacgaaccttaaaagcgatccatcgtaggccttattaatttta 29334103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 223 - 413
Target Start/End: Original strand, 18615515 - 18615704
Alignment:
Q  223 gcttatttgatcgaatggtccctcaaataatttcaagttttcattttggtcccacaattaataaaacgtatcttttggtccctcacttttttctccgttt 322  Q
    ||||||| |||||  |||||||| |  ||||||||  |||||||||||||| ||||||||||||||      |||| |||||  || |||| ||||||||    
T  18615515 gcttattagatcgtttggtcccttatttaatttcatattttcattttggtctcacaattaataaaaatggctttttagtcccctacattttcctccgttt 18615614  T
Q  323 gccaaataaatcccgaactgttaactttaactccaaatgtctatggtagaccaaccttaaaagtggtccatcgtagaccttattaatttta 413  Q
    |||||||||||||||| ||||||| ||||| |  |||| | |||||| ||| ||||||||||| | |||||||||| ||||||||||||||    
T  18615615 gccaaataaatcccga-ctgttaattttaattttaaatatttatggtggacgaaccttaaaagcgatccatcgtaggccttattaatttta 18615704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 218 - 328
Target Start/End: Original strand, 36010571 - 36010681
Alignment:
Q  218 ttttggcttatttgatcgaatggtccctcaaataatttcaagttttcattttggtcccacaattaataaaacgtatcttttggtccctcacttttttctc 317  Q
    |||||| |||||||||| | | |||||| ||||||||||| |||||||||||||||  || ||||||||||||||| |||| |||||||||||||| ||     
T  36010571 ttttggtttatttgatccattagtcccttaaataatttcatgttttcattttggtcttacgattaataaaacgtatattttagtccctcactttttcctt 36010670  T
Q  318 cgtttgccaaa 328  Q
    |||||||||||    
T  36010671 cgtttgccaaa 36010681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 258 - 434
Target Start/End: Original strand, 34464002 - 34464178
Alignment:
Q  258 agttttcattttggtcccacaattaataaaacgtatcttttggtccctcacttttttctccgtttgccaaataaatcccgaactgttaactttaactcca 357  Q
    |||||||||||||||   | ||||||||||||  |||||||||||| |||  |||  |||||||   |||||||||| |  |||||||| |||||| |||    
T  34464002 agttttcattttggtttgataattaataaaacaaatcttttggtccatcaggtttgcctccgttaatcaaataaatctctgactgttaagtttaacccca 34464101  T
Q  358 aatgtctatggtagaccaaccttaaaagtggtccatcgtagaccttattaattttattaattttaacagttcgatct 434  Q
    ||||||||| || |||||||||||| ||||||||| | ||||||||||||  ||| ||||||| ||| ||| |||||    
T  34464102 aatgtctatcgttgaccaaccttaagagtggtccaccatagaccttattagattttttaatttaaactgtttgatct 34464178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 238 - 424
Target Start/End: Complemental strand, 2277571 - 2277385
Alignment:
Q  238 tggtccctcaaataatttcaagttttcattttggtcccacaattaataaaacgtatcttttggtccctcacttttttctccgtttgccaaataaatcccg 337  Q
    ||||||||||||||||||| ||||||||||||||||||| || ||||||||| ||| |||||||||||||  ||   ||| ||  | |||||||||||      
T  2277571 tggtccctcaaataatttccagttttcattttggtcccataagtaataaaacttatgttttggtccctcaagttcacctcagtcggtcaaataaatccat 2277472  T
Q  338 aactgttaactttaactccaaatgtctatggtagaccaaccttaaaagtggtccatcgtagaccttattaattttattaattttaac 424  Q
        |||||||||||| ||||||||||||||| ||||||| |   |  | ||||| | ||||||||||||||||| | |||||||||    
T  2277471 gggagttaactttaaccccaaatgtctatggtggaccaacatggtagatagtccaccatagaccttattaattttttcaattttaac 2277385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 221 - 414
Target Start/End: Original strand, 11547656 - 11547851
Alignment:
Q  221 tggcttatttgatcgaatggtccctcaaataatttcaagttttcattttggtcccacaattaataaaacgtatcttttggtccctcacttttttctccgt 320  Q
    |||||||||||||  | |||||| | ||||||||||||||||||||||||||| || ||||||||||||  || ||||   |||||| ||||| || |||    
T  11547656 tggcttatttgatttattggtcctttaaataatttcaagttttcattttggtctcataattaataaaacacatgttttaacccctcattttttccttcgt 11547755  T
Q  321 ttgccaaataaatcccgaactgttaactttaactccaa---atgtctatggtagaccaaccttaaaagtggtccatcgtagaccttattaattttat 414  Q
    ||| ||||||||||| | |||||||| |||||| ||||   ||||||||  | |||||||||||  ||||||||| | |||| | |||||| |||||    
T  11547756 ttgtcaaataaatcctg-actgttaagtttaaccccaaatgatgtctatcatggaccaaccttaggagtggtccaccatagatcgtattaaatttat 11547851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 238 - 377
Target Start/End: Original strand, 34147150 - 34147289
Alignment:
Q  238 tggtccctcaaataatttcaagttttcattttggtcccacaattaataaaacgtatcttttggtccctcacttttttctccgtttgccaaataaatcccg 337  Q
    ||||||||||||||||||  ||||||||||||||||||| || |||||||||  || |||||||||||||  ||   |||||   | |||||||||||      
T  34147150 tggtccctcaaataattttcagttttcattttggtcccataagtaataaaactcatgttttggtccctcaagttcacctccgccagtcaaataaatccat 34147249  T
Q  338 aactgttaactttaactccaaatgtctatggtagaccaac 377  Q
       ||||||||||||| ||||||||||||||| |||||||    
T  34147250 gggtgttaactttaaccccaaatgtctatggtggaccaac 34147289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 250 - 372
Target Start/End: Original strand, 35903534 - 35903656
Alignment:
Q  250 taatttcaagttttcattttggtcccacaattaataaaacgtatcttttggtccctcacttttttctccgtttgccaaataaatcccgaactgttaactt 349  Q
    ||||||||||||||||||||||||||| || ||||||||   || ||||||||||||| || | |||||||  | |||||||||||    ||||||| ||    
T  35903534 taatttcaagttttcattttggtcccataactaataaaagtcatgttttggtccctcaattatatctccgtcagtcaaataaatccttggctgttaagtt 35903633  T
Q  350 taactccaaatgtctatggtaga 372  Q
    |||| ||||||||||||| ||||    
T  35903634 taaccccaaatgtctatgataga 35903656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 250 - 411
Target Start/End: Original strand, 21664829 - 21664989
Alignment:
Q  250 taatttcaagttttcattttggtcccacaattaataaaacgtatcttttggtccctcacttttttctccgtttgccaaataaatcccgaactgttaactt 349  Q
    |||||||||||||||||||||||| ||||||| ||||||  | | |||| |||  ||| ||||| |||| ||||  ||||||||  |  |||||||| ||    
T  21664829 taatttcaagttttcattttggtcacacaattcataaaatttctgttttagtct-tcattttttcctccatttgttaaataaatttctgactgttaagtt 21664927  T
Q  350 taactccaaatgtctatggtagaccaaccttaaaagtggtccatcgtagaccttattaattt 411  Q
    ||||| |||||||||||||| ||||||| ||  | |||||| ||| |||||||| |||||||    
T  21664928 taacttcaaatgtctatggtggaccaacattgtaggtggtcaatcatagaccttgttaattt 21664989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 258 - 420
Target Start/End: Original strand, 34512848 - 34513008
Alignment:
Q  258 agttttcattttggtcccacaattaataaaacgtatcttttggtccctcacttttttctccgtttgccaaataaatcccgaactgttaactttaactcca 357  Q
    ||||||||||||||||||| ||||||||||||  || ||||| |||||||  |||  ||||||| | ||||||||||  | |||||||| |||||| |      
T  34512848 agttttcattttggtcccataattaataaaactcatgttttgatccctcaaatttgcctccgttagtcaaataaatcatg-actgttaagtttaac-ctt 34512945  T
Q  358 aatgtctatggtagaccaaccttaaaagtggtccatcgtagaccttattaattttattaattt 420  Q
    ||||| |||||| || ||||| ||| ||||||||| | || |||||||||| ||| |||||||    
T  34512946 aatgtatatggtggatcaaccataagagtggtccaccatataccttattaaattttttaattt 34513008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 260 - 434
Target Start/End: Complemental strand, 34513633 - 34513459
Alignment:
Q  260 ttttcattttggtcccacaattaataaaacgtatcttttggtccctcacttttttctccgtttgccaaataaatcccgaactgttaactttaactccaaa 359  Q
    ||||||||||||| ||| ||||||||||||  || ||| |||| |||   |||  ||||||| | ||||||| ||||     |||||  ||||| |||||    
T  34513633 ttttcattttggttccataattaataaaactcatgtttaggtctctcgggtttgcctccgttagtcaaataattccctggtcgttaagcttaaccccaaa 34513534  T
Q  360 tgtctatggtagaccaaccttaaaagtggtccatcgtagaccttattaattttattaattttaacagttcgatct 434  Q
    ||| |||||| |||||||||||| |||| |||| | ||||||||||||||||| ||||||| ||| ||| |||||    
T  34513533 tgtatatggttgaccaaccttaagagtgatccaccatagaccttattaatttttttaatttaaaccgtttgatct 34513459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 240 - 353
Target Start/End: Complemental strand, 12359779 - 12359666
Alignment:
Q  240 gtccctcaaataatttcaagttttcattttggtcccacaattaataaaacgtatcttttggtccctcacttttttctccgtttgccaaataaatcccgaa 339  Q
    |||||| ||||||||||| |||||| |||| ||||||||||||||||||      ||||||||||||| ||||| ||  ||| |||||||||||||  |     
T  12359779 gtcccttaaataatttcatgttttcgttttagtcccacaattaataaaattggcgttttggtccctcattttttcctttgttcgccaaataaatccgtag 12359680  T
Q  340 ctgttaactttaac 353  Q
    ||||||||||||||    
T  12359679 ctgttaactttaac 12359666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 223 - 334
Target Start/End: Original strand, 34468957 - 34469068
Alignment:
Q  223 gcttatttgatcgaatggtccctcaaataatttcaagttttcattttggtcccacaattaataaaacgtatcttttggtccctcacttttttctccgttt 322  Q
    ||||||| |||||  |||||||| |  |||||||| ||||||||||||||| ||||||||||||||   |  |||| ||||||||| ||||  || ||||    
T  34468957 gcttattagatcgtttggtcccttatttaatttcatgttttcattttggtcgcacaattaataaaaatgacgttttagtccctcacattttcttctgttt 34469056  T
Q  323 gccaaataaatc 334  Q
    ||||||||||||    
T  34469057 gccaaataaatc 34469068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 223 - 334
Target Start/End: Complemental strand, 36011758 - 36011648
Alignment:
Q  223 gcttatttgatcgaatggtccctcaaataatttcaagttttcattttggtcccacaattaataaaacgtatcttttggtccctcacttttttctccgttt 322  Q
    |||||||||||| | || ||| | ||||||||| |||||| ||||||  ||||| ||||||||||| |||  |||| |||||||| |||||  |||||||    
T  36011758 gcttatttgatccattgatcctttaaataattttaagttt-cattttaatcccataattaataaaatgtacgttttagtccctcattttttaatccgttt 36011660  T
Q  323 gccaaataaatc 334  Q
    ||||||||||||    
T  36011659 gccaaataaatc 36011648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 222 - 336
Target Start/End: Original strand, 6030603 - 6030717
Alignment:
Q  222 ggcttatttgatcgaatggtccctcaaataatttcaagttttcattttggtcccacaattaataaaacgtatcttttggtccctcacttttttctccgtt 321  Q
    |||||||| |||||  |||||||| |  |||||||| ||||||||||| ||||||||||||||||||      |||| || ||| | ||||| |||||||    
T  6030603 ggcttattagatcgtttggtcccttatttaatttcatgttttcattttagtcccacaattaataaaattggcgttttagttccttattttttcctccgtt 6030702  T
Q  322 tgccaaataaatccc 336  Q
    |||||||||||||||    
T  6030703 tgccaaataaatccc 6030717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 238 - 411
Target Start/End: Original strand, 37956963 - 37957135
Alignment:
Q  238 tggtccctcaaataatttcaagttttcattttggtcccacaattaataaaacgtatcttttggtccctcacttttttctccgtttgccaaataaatcccg 337  Q
    |||||||| || ||||||||| ||||||||||||||||| || ||||||||   || ||||||||||| | || | |||||||  | |||| |||||| |    
T  37956963 tggtcccttaattaatttcaaattttcattttggtcccataagtaataaaattcatgttttggtcccttaattgtctctccgtcggtcaaagaaatcctg 37957062  T
Q  338 aactgttaactttaactccaaatgtctatggtagaccaaccttaaaagtggtccatcgtagaccttattaattt 411  Q
    || | |||| |||||| |||||| ||| | || || |||| ||| | |||||||| | | ||||||||||||||    
T  37957063 aa-tattaagtttaaccccaaatatctcttgtggatcaacattatatgtggtccaccattgaccttattaattt 37957135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 325 - 420
Target Start/End: Original strand, 34467607 - 34467702
Alignment:
Q  325 caaataaatcccgaactgttaactttaactccaaatgtctatggtagaccaaccttaaaagtggtccatcgtagaccttattaattttattaattt 420  Q
    ||||||||||||   ||||| | ||||||| |||||||||||| | ||| |||||||| ||||||||| | || |||||||||| ||| |||||||    
T  34467607 caaataaatccctggctgttgagtttaacttcaaatgtctatgatggacaaaccttaagagtggtccaccataaaccttattaagttttttaattt 34467702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 238 - 307
Target Start/End: Original strand, 2276295 - 2276364
Alignment:
Q  238 tggtccctcaaataatttcaagttttcattttggtcccacaattaataaaacgtatcttttggtccctca 307  Q
    ||||||||||||||||||  |||||||||||| |||| | || |||||||||  || |||||||||||||    
T  2276295 tggtccctcaaataattttcagttttcattttagtcctataagtaataaaactcatgttttggtccctca 2276364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 340 - 392
Target Start/End: Complemental strand, 4921059 - 4921006
Alignment:
Q  340 ctgttaactttaactcc-aaatgtctatggtagaccaaccttaaaagtggtcca 392  Q
    |||||||||||||| || ||||||||||||||||||||| |||||| |||||||    
T  4921059 ctgttaactttaacccccaaatgtctatggtagaccaactttaaaaatggtcca 4921006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 238 - 307
Target Start/End: Complemental strand, 34148462 - 34148393
Alignment:
Q  238 tggtccctcaaataatttcaagttttcattttggtcccacaattaataaaacgtatcttttggtccctca 307  Q
    ||||||||||||||||||  |||||||||||| || ||| || |||||||||  || |||||||||||||    
T  34148462 tggtccctcaaataattttcagttttcattttagttccataaataataaaactcatgttttggtccctca 34148393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 250 - 305
Target Start/End: Complemental strand, 30749383 - 30749328
Alignment:
Q  250 taatttcaagttttcattttggtcccacaattaataaaacgtatcttttggtccct 305  Q
    ||||||| |||||||||||| |||||| ||||||||||||  || |||||||||||    
T  30749383 taatttccagttttcattttagtcccataattaataaaactcatgttttggtccct 30749328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 250 - 288
Target Start/End: Original strand, 44191162 - 44191200
Alignment:
Q  250 taatttcaagttttcattttggtcccacaattaataaaa 288  Q
    |||||||| ||||||||||| ||||||||||||||||||    
T  44191162 taatttcatgttttcattttagtcccacaattaataaaa 44191200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 222 - 275
Target Start/End: Original strand, 6028743 - 6028796
Alignment:
Q  222 ggcttatttgatcgaatggtccctcaaataatttcaagttttcattttggtccc 275  Q
    ||||||||||||| | ||||| |  |||||||||||| ||||||||||||||||    
T  6028743 ggcttatttgatccattggtctcctaaataatttcaaattttcattttggtccc 6028796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 388 - 424
Target Start/End: Original strand, 12095440 - 12095476
Alignment:
Q  388 gtccatcgtagaccttattaattttattaattttaac 424  Q
    ||||||||||||||||||||| ||| |||||||||||    
T  12095440 gtccatcgtagaccttattaaattttttaattttaac 12095476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 340 - 392
Target Start/End: Complemental strand, 16295217 - 16295165
Alignment:
Q  340 ctgttaactttaactccaaatgtctatggtagaccaaccttaaaagtggtcca 392  Q
    |||||||||||||||  |||||| | |||| |||||||||||| |||||||||    
T  16295217 ctgttaactttaactttaaatgtttttggtggaccaaccttaacagtggtcca 16295165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 236 - 276
Target Start/End: Complemental strand, 23233800 - 23233760
Alignment:
Q  236 aatggtccctcaaataatttcaagttttcattttggtccca 276  Q
    ||||||||||||| ||||| ||| |||||||||||||||||    
T  23233800 aatggtccctcaactaattacaaattttcattttggtccca 23233760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 121; Significance: 1e-61; HSPs: 62)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 121; E-Value: 1e-61
Query Start/End: Original strand, 217 - 459
Target Start/End: Original strand, 32797131 - 32797376
Alignment:
Q  217 attttggcttatttgatcgaatggtccctcaaataatttcaagttttcattttggtcccacaattaataaaacgtatcttttggtccctcacttttttct 316  Q
    |||||||||||||||||| | |||||||| ||||||||||||||||||||||||||||||||||||||||||||||  |||  ||||||||  |||| ||    
T  32797131 attttggcttatttgatctattggtcccttaaataatttcaagttttcattttggtcccacaattaataaaacgtacgtttaagtccctcaggttttcct 32797230  T
Q  317 ccgtttgcca---aataaatcccgaactgttaactttaactccaaatgtctatggtagaccaaccttaaaagtggtccatcgtagaccttattaatttta 413  Q
    |||||| |||   |||||||| ||  | ||||| |||||||||||||||||||| | || ||||||||||| |||| ||||||||||||||||||||||     
T  32797231 ccgtttaccaaataataaatcgcg-gccgttaagtttaactccaaatgtctatgatggatcaaccttaaaaatggttcatcgtagaccttattaattttg 32797329  T
Q  414 ttaattttaacagttcgatctatttatcataatag-gaccgttagat 459  Q
    |||||||||||  ||||||||||||||||||| || |||||||||||    
T  32797330 ttaattttaaccattcgatctatttatcataaaagagaccgttagat 32797376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 120; E-Value: 4e-61
Query Start/End: Original strand, 222 - 434
Target Start/End: Original strand, 30786674 - 30786887
Alignment:
Q  222 ggcttatttgatcgaatggtccctcaaataatttcaagttttcattttggtcccacaattaataaaacgtatcttttggtccctcacttttttctccgtt 321  Q
    ||||||||||||  |||||||| ||||||||||| |||||||||||||| || || |||||||||||||||| ||||| |||||||||||||||||||||    
T  30786674 ggcttatttgattcaatggtccttcaaataattttaagttttcattttgatcacataattaataaaacgtatattttgatccctcacttttttctccgtt 30786773  T
Q  322 tgccaaataaatcccgaactgttaac--tttaactccaaatgtctatggtagaccaaccttaaaagtggtccatcgtagaccttattaattttattaatt 419  Q
    |||||||||||| ||| |||||||||  |||||||| ||||||||||||| || |||| |||||||||||||||| || |||||||||||||| ||||||    
T  30786774 tgccaaataaattccg-actgttaactttttaactctaaatgtctatggtggatcaactttaaaagtggtccatcataaaccttattaattttgttaatt 30786872  T
Q  420 ttaacagttcgatct 434  Q
    ||||| ||| |||||    
T  30786873 ttaaccgtttgatct 30786887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 117; E-Value: 3e-59
Query Start/End: Original strand, 217 - 445
Target Start/End: Original strand, 32693823 - 32694050
Alignment:
Q  217 attttggcttatttgatcgaatggtccctcaaataatttcaagttttcattttggtcccacaattaataaaacgtatcttttggtccctcacttttttct 316  Q
    |||||||||||||||||  ||||||||   || |||||| ||||||||||||||||||||||||||||||||| ||   |||||||| |||  |||| ||    
T  32693823 attttggcttatttgattcaatggtcctctaattaattttaagttttcattttggtcccacaattaataaaacatacgctttggtccttcagattttcct 32693922  T
Q  317 ccgtttgccaaataaatcccgaactgttaactttaactccaaatgtctatggtagaccaaccttaaaagtggtccatcgtagaccttattaattttatta 416  Q
    |||||||||||||||||||| ||| |||||||||||||  |||||| |||| | |||||||||||||||||| | ||| |||||||||||||||||||||    
T  32693923 ccgtttgccaaataaatccc-aacagttaactttaactttaaatgtatatgatggaccaaccttaaaagtggcctatcatagaccttattaattttatta 32694021  T
Q  417 attttaacagttcgatctatttatcataa 445  Q
    |||||||| ||| ||||||||||||||||    
T  32694022 attttaaccgtttgatctatttatcataa 32694050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 117; E-Value: 3e-59
Query Start/End: Original strand, 250 - 461
Target Start/End: Complemental strand, 42100196 - 42099985
Alignment:
Q  250 taatttcaagttttcattttggtcccacaattaataaaacgtatcttttggtccctcacttttttctccgtttgccaaataaatcccgaactgttaactt 349  Q
    |||||||| ||||||||||||||| ||||||||||||||      ||||| |||||||  |||| ||||||||||||||||| |||||| ||||||||||    
T  42100196 taatttcatgttttcattttggtctcacaattaataaaaatggcgttttgatccctcatattttcctccgtttgccaaataattcccga-ctgttaactt 42100098  T
Q  350 taactccaaatgtctatggtagaccaaccttaaaagtggtccatcgtagaccttattaattttattaattttaacagttcgatctatttatcataatagg 449  Q
    ||||| ||||||||| |||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||  ||||||||||||||||||| |||    
T  42100097 taacttcaaatgtctttggtggaccaaccttaaaagtggtccatcgtagaccttattaattttgttaattttaaccattcgatctatttatcataaaagg 42099998  T
Q  450 -accgttagattt 461  Q
     ||||||||||||    
T  42099997 aaccgttagattt 42099985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 113; E-Value: 6e-57
Query Start/End: Original strand, 225 - 445
Target Start/End: Original strand, 41629709 - 41629928
Alignment:
Q  225 ttatttgatcgaatggtccctcaaataatttcaagttttcattttggtcccacaattaataaaacgtatcttttggtccctcacttttttctccgtttgc 324  Q
    |||||||||| | | |||||  ||||||||||||||||| ||||||||| ||||||||||||||||||| ||||| |||||||  ||||  |||||||||    
T  41629709 ttatttgatccattagtcccctaaataatttcaagtttttattttggtctcacaattaataaaacgtatattttgatccctcaagttttcttccgtttgc 41629808  T
Q  325 caaataaatcccgaactgttaactttaactccaaatgtctatggtagaccaaccttaaaagtggtccatcgtagaccttattaattttattaattttaac 424  Q
    ||||||||||||| || |||||||| ||||||||| |||||||||  |||||||||||||||||| ||||||| |||||||||||||| |||||||||||    
T  41629809 caaataaatcccg-accgttaacttgaactccaaaagtctatggtgaaccaaccttaaaagtggttcatcgtataccttattaattttgttaattttaac 41629907  T
Q  425 agttcgatctatttatcataa 445  Q
      ||| || ||||||||||||    
T  41629908 cattcaatttatttatcataa 41629928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 222 - 459
Target Start/End: Original strand, 13116328 - 13116565
Alignment:
Q  222 ggcttatttgatcgaatggtccctcaaataatttcaagttttcattttggtcccacaattaataaaacgtatc-ttttggtccctcacttttttctccgt 320  Q
    |||||||| |||||  |||||||| |  |||||||| |||||||||||||||||||||||||||||| ||  | |||| |||| |||| |||| ||||||    
T  13116328 ggcttattagatcgtttggtcccttatttaatttcatgttttcattttggtcccacaattaataaaa-gtggcgttttagtccttcacattttcctccgt 13116426  T
Q  321 ttgccaaataaatcccgaactgttaactttaactccaaatgtctatggtagaccaaccttaaaagtggtccatcgtagaccttattaattttattaattt 420  Q
    |||||||||||||||||| |||||||||||||||||||||||||||  |||||||| ||| | |||||||||||||||||| ||||| |||| |||||||    
T  13116427 ttgccaaataaatcccga-ctgttaactttaactccaaatgtctataatagaccaatcttcagagtggtccatcgtagaccctattacttttgttaattt 13116525  T
Q  421 taacagttcgatctatttatcataata-ggaccgttagat 459  Q
    ||||  ||||||||||||||||||| | ||||||||||||    
T  13116526 taaccattcgatctatttatcataaaagggaccgttagat 13116565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 108; E-Value: 6e-54
Query Start/End: Original strand, 239 - 434
Target Start/End: Original strand, 22551022 - 22551216
Alignment:
Q  239 ggtccctcaaataatttcaagttttcattttggtcccacaattaataaaacgtatcttttggtccctcacttttttctccgtttgccaaataaatcccga 338  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||| |     
T  22551022 ggtccctcaaataatttcaagtttttattttggtcccacaattaataaaacgtatcttttggtccctcac-tttttctccatttgccaaataaatcctgg 22551120  T
Q  339 actgttaactttaactccaaatgtctatggtagaccaaccttaaaagtggtccatcgtagaccttattaattttattaattttaacagttcgatct 434  Q
    | |||||| |||||| |||||| |||||||| ||| ||||||||||||| |||| | || |||||||||| |||  |||||| ||| ||| |||||    
T  22551121 attgttaagtttaaccccaaatctctatggtggacaaaccttaaaagtgatccaccataaaccttattaaattttgtaatttaaaccgtttgatct 22551216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 222 - 434
Target Start/End: Complemental strand, 32798650 - 32798437
Alignment:
Q  222 ggcttatttgatcgaatggtccctcaaataatttcaagttttcattttggtcccacaattaataaaacgtatcttttggtccctcacttttttctccgtt 321  Q
    ||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||| |||||||||||||    
T  32798650 ggcttatttgatgcaatggtccctcaaataatttcaagttttcattttggtcccacaattaataaaacgtaccttttagtccctcaattttttctccgtt 32798551  T
Q  322 tgccaaataaatcccgaactgttaactttaactccaa--atgtctatggtagaccaaccttaaaagtggtccatcgtagaccttattaattttattaatt 419  Q
    || ||||||||| ||  || ||||| |||||||| ||  ||||||||||| || ||||||||| ||||||||| | |||| | |||||||| | ||||||    
T  32798550 tgtcaaataaat-cctcacggttaagtttaactcaaatgatgtctatggtggatcaaccttaagagtggtccaccatagatcctattaattattttaatt 32798452  T
Q  420 ttaacagttcgatct 434  Q
    | ||| ||| |||||    
T  32798451 taaaccgtttgatct 32798437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 222 - 440
Target Start/End: Complemental strand, 44076481 - 44076261
Alignment:
Q  222 ggcttatttgatcgaatggtccctcaaataatttcaagttttcattttggtcccacaattaataaaacgtatcttttggtccctcacttttttctccgtt 321  Q
    ||||||||||||| ||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||| ||||| ||||| |||||||    
T  44076481 ggcttatttgatccaatggtccctcaaataatttcaaatttttattttggtcccacaattaataaaacgtatcttttggtgcctcaatttttcctccgtt 44076382  T
Q  322 tgccaaataaatcccgaactgttaactttaactccaa---atgtctatggtagaccaaccttaaaagtggtccatcgtagaccttattaattttattaat 418  Q
    |||||||||||||||  || ||||| |||||| ||||   ||||||||||| || |||| |||||| || |||| | || | |||||||||||| |||||    
T  44076381 tgccaaataaatccc-tacagttaagtttaaccccaaatgatgtctatggtggaacaacattaaaaatgatccaccataaatcttattaatttttttaat 44076283  T
Q  419 tttaacagttcgatctatttat 440  Q
    || |||  || |||||||||||    
T  44076282 ttaaaccatttgatctatttat 44076261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 247 - 445
Target Start/End: Original strand, 45279703 - 45279900
Alignment:
Q  247 aaataatttcaagttttcattttggtcccacaattaataaaacgtatcttttggtccctcacttttttctccgtttgccaaataaatcccgaactgttaa 346  Q
    |||||||||||| |||||||||| |||  |||||||||||||||||  |||||||||||||  ||||| | |||||| |||||||||||||| | |||||    
T  45279703 aaataatttcaaattttcattttagtcatacaattaataaaacgtacgttttggtccctcaagttttttttcgtttggcaaataaatcccga-cggttaa 45279801  T
Q  347 ctttaactccaaatgtctatggtagaccaaccttaaaagtggtccatcgtagaccttattaattttattaattttaacagttcgatctatttatcataa 445  Q
    ||||||||| |||||| |||||| |||||  ||||||||||||| ||||||||||||| ||||||| |||||||||||  |||||||||||||| ||||    
T  45279802 ctttaactctaaatgtatatggtggaccagtcttaaaagtggtctatcgtagaccttaataattttgttaattttaaccattcgatctatttatgataa 45279900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 96; E-Value: 9e-47
Query Start/End: Original strand, 220 - 399
Target Start/End: Complemental strand, 30787720 - 30787542
Alignment:
Q  220 ttggcttatttgatcgaatggtccctcaaataatttcaagttttcattttggtcccacaattaataaaacgtatcttttggtccctcacttttttctccg 319  Q
    ||||||||||||||| |||| || |||||||||||| |||||||||||||||||||| |||||||||||  ||| |||||||||||||||||||  ||||    
T  30787720 ttggcttatttgatctaatgttctctcaaataattttaagttttcattttggtcccataattaataaaatatatattttggtccctcactttttcttccg 30787621  T
Q  320 tttgccaaataaatcccgaactgttaactttaactccaaatgtctatggtagaccaaccttaaaagtggtccatcgtaga 399  Q
    |||||||||||||||| | | ||||||||||||||| |||||| ||| || ||||||| |||||| |||| |||||||||    
T  30787620 tttgccaaataaatcctgta-tgttaactttaactctaaatgtttatagtggaccaactttaaaaatggttcatcgtaga 30787542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 247 - 420
Target Start/End: Original strand, 6397806 - 6397978
Alignment:
Q  247 aaataatttcaagttttcattttggtcccacaattaataaaacgtatcttttggtccctcacttttttctccgtttgccaaataaatcccgaactgttaa 346  Q
    |||||||||||  |||||||||||||||||||||||||||||| ||  |||| |||||||| ||||||||||||||||||||||||||  ||| ||||||    
T  6397806 aaataatttcatattttcattttggtcccacaattaataaaacttacattttagtccctcatttttttctccgtttgccaaataaatcatgaa-tgttaa 6397904  T
Q  347 ctttaactccaaatgtctatggtagaccaaccttaaaagtggtccatcgtagaccttattaattttattaattt 420  Q
     |||||||||||||  |||||||| ||||||||| | ||||||||| | ||||||||||||||||| |||||||    
T  6397905 atttaactccaaataactatggtaaaccaacctttacagtggtccaccatagaccttattaatttttttaattt 6397978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 221 - 361
Target Start/End: Original strand, 4810466 - 4810605
Alignment:
Q  221 tggcttatttgatcgaatggtccctcaaataatttcaagttttcattttggtcccacaattaataaaacgtatcttttggtccctcacttttttctccgt 320  Q
    |||||||||||||| |||||||||||||||| |||||| |||| |||||||||||| |||||||||||||||| ||||||||| |||  |||||||||||    
T  4810466 tggcttatttgatctaatggtccctcaaatactttcaaatttttattttggtcccataattaataaaacgtatgttttggtccttcaaatttttctccgt 4810565  T
Q  321 ttgccaaataaatcccgaactgttaactttaactccaaatg 361  Q
    ||||||||||||||||| || |||||||||||| |||||||    
T  4810566 ttgccaaataaatcccg-acggttaactttaaccccaaatg 4810605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 222 - 412
Target Start/End: Complemental strand, 42872307 - 42872118
Alignment:
Q  222 ggcttatttgatcgaatggtccctcaaataatttcaagttttcattttggtcccacaattaataaaacgtatcttttggtccctcacttttttctccgtt 321  Q
    ||||||||||||| |||||||||| ||||||||| |||||||||||||  || || ||| |||||||||||  |||| |||| ||||||||| |||||||    
T  42872307 ggcttatttgatccaatggtcccttaaataattttaagttttcattttaatctcataatgaataaaacgtacgttttagtccttcactttttcctccgtt 42872208  T
Q  322 tgccaaataaatcccgaactgttaactttaactccaaatgtctatggtagaccaaccttaaaagtggtccatcgtagaccttattaatttt 412  Q
    || ||||||||||| | || ||||||||||||  ||||||||||||||||||||||||||| ||||||| | | |||| | ||||||||||    
T  42872207 tgtcaaataaatcctg-acggttaactttaacctcaaatgtctatggtagaccaaccttaagagtggtctaccatagatcctattaatttt 42872118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 86; E-Value: 8e-41
Query Start/End: Original strand, 218 - 434
Target Start/End: Complemental strand, 8571739 - 8571522
Alignment:
Q  218 ttttggcttatttgatcgaatggtccctcaaataatttcaagttttcattttggtcccacaattaataaaacgtatcttttggtccctcacttttttctc 317  Q
    ||||||||||||||||| | ||||| |  || ||||||||  ||||||||||||||  |||||||||||||||||  ||||||||| ||| |||||||||    
T  8571739 ttttggcttatttgatctattggtctcctaactaatttcacattttcattttggtcatacaattaataaaacgtacgttttggtccttcatttttttctc 8571640  T
Q  318 cgtttgccaaataaatcccga-actgttaactttaactccaaatgtctatggtagaccaaccttaaaagtggtccatcgtagaccttattaattttatta 416  Q
    ||||| ||||||||||||| |  ||||||| |||||| ||||||||||||||| ||||||| |||||| ||||||| | || ||||||||||  || |||    
T  8571639 cgtttaccaaataaatccctagtctgttaagtttaaccccaaatgtctatggtggaccaactttaaaaatggtccaccatataccttattaaacttttta 8571540  T
Q  417 attttaacagttcgatct 434  Q
    |||| ||| ||| |||||    
T  8571539 atttaaactgtttgatct 8571522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 221 - 434
Target Start/End: Original strand, 42870810 - 42871025
Alignment:
Q  221 tggcttatttgatcgaatggtccctcaaataatttcaagttttcattttggtcccacaattaataaaacgtatcttttggtccctcacttttttctccgt 320  Q
    |||||||||||||| ||||||  |  ||||||||||||||||||||||||||||||||||||||||||||||  |||| |||||| |||||||  || ||    
T  42870810 tggcttatttgatccaatggtttcctaaataatttcaagttttcattttggtcccacaattaataaaacgtacgttttagtcccttactttttcgtctgt 42870909  T
Q  321 ttgccaaataaatcccgaactgttaactttaactccaa---atgtctatggtagaccaaccttaaaagtggtccatcgtagaccttattaattttattaa 417  Q
    ||||| ||| ||||| | |||||||| |||||| ||||   |||||||| || |||||| ||||| ||||||||| ||||||||||||||| |||  |||    
T  42870910 ttgccgaatgaatcctg-actgttaagtttaaccccaaaagatgtctattgtggaccaatcttaagagtggtccaccgtagaccttattaaattttgtaa 42871008  T
Q  418 ttttaacagttcgatct 434  Q
    ||| ||| ||| |||||    
T  42871009 tttaaaccgtttgatct 42871025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 217 - 362
Target Start/End: Original strand, 28418799 - 28418944
Alignment:
Q  217 attttggcttatttgatcgaatggtccctcaaataatttcaagttttcattttggtcccacaattaataaaacgtatcttttggtccctcacttttttct 316  Q
    |||| |||||| | |||| | |||||||| |||||||||||| ||||||||||||||||| ||||||||||||  |  |||| |||||||||||||| ||    
T  28418799 atttaggcttaatagatccattggtcccttaaataatttcaatttttcattttggtcccataattaataaaacacacgttttagtccctcactttttcct 28418898  T
Q  317 ccgtttgccaaataaatcccgaactgttaactttaactccaaatgt 362  Q
    |||||||||||||||||| | |||||||||||||||||| ||||||    
T  28418899 ccgtttgccaaataaatctcaaactgttaactttaactctaaatgt 28418944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 220 - 336
Target Start/End: Original strand, 8570114 - 8570230
Alignment:
Q  220 ttggcttatttgatcgaatggtccctcaaataatttcaagttttcattttggtcccacaattaataaaacgtatcttttggtccctcacttttttctccg 319  Q
    ||||||||||||||| |||||||||  || |||||||| |||||||||||||||| |||||||||||||||||  |||||||||||||||||| |||| |    
T  8570114 ttggcttatttgatccaatggtcccctaattaatttcacgttttcattttggtcctacaattaataaaacgtacgttttggtccctcacttttgtctctg 8570213  T
Q  320 tttgccaaataaatccc 336  Q
    |||||||||||||||||    
T  8570214 tttgccaaataaatccc 8570230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 222 - 335
Target Start/End: Original strand, 26696530 - 26696643
Alignment:
Q  222 ggcttatttgatcgaatggtccctcaaataatttcaagttttcattttggtcccacaattaataaaacgtatcttttggtccctcacttttttctccgtt 321  Q
    ||||||||||||  |||||||||  || |||||||||||||||||||||||||||||||||||||||| ||  ||||||||||||||||||| |||| ||    
T  26696530 ggcttatttgattcaatggtcccctaattaatttcaagttttcattttggtcccacaattaataaaacatacattttggtccctcactttttcctccatt 26696629  T
Q  322 tgccaaataaatcc 335  Q
    ||||||||||||||    
T  26696630 tgccaaataaatcc 26696643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 222 - 390
Target Start/End: Complemental strand, 45281306 - 45281138
Alignment:
Q  222 ggcttatttgatcgaatggtccctcaaataatttcaagttttcattttggtcccacaattaataaaacgtatcttttggtccctcacttttttctccgtt 321  Q
    ||||||||||||| ||| ||||||||||||||||||||||||||||||||||| |||||||||||||  ||| ||||| ||| |||  |||| |||| ||    
T  45281306 ggcttatttgatccaatagtccctcaaataatttcaagttttcattttggtccaacaattaataaaa-atatgttttgatccttcagattttcctccatt 45281208  T
Q  322 tgccaaataaatcccgaactgttaactttaactccaa---atgtctatggtagaccaaccttaaaagtggtc 390  Q
    ||||||||||||||| ||| ||||||||||| |||||   ||||||| ||| |||||||||||| |||||||    
T  45281207 tgccaaataaatccc-aacagttaactttaa-tccaaatgatgtctacggtggaccaaccttaagagtggtc 45281138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 238 - 366
Target Start/End: Complemental strand, 28420276 - 28420148
Alignment:
Q  238 tggtccctcaaataatttcaagttttcattttggtcccacaattaataaaacgtatcttttggtccctcacttttttctccgtttgccaaataaatcccg 337  Q
    |||||||| |||||||||||| ||||||||||||||||| ||||||||||||  |  |||| |||||||| ||||| ||||||||| |||||||||| |     
T  28420276 tggtcccttaaataatttcaatttttcattttggtcccataattaataaaacacacgttttagtccctcattttttcctccgtttgtcaaataaatctca 28420177  T
Q  338 aactgttaactttaactccaaatgtctat 366  Q
    |||||||||||||||||| ||||||||||    
T  28420176 aactgttaactttaactctaaatgtctat 28420148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 250 - 424
Target Start/End: Original strand, 38696334 - 38696508
Alignment:
Q  250 taatttcaagttttcattttggtcccacaattaataaaacgtatcttttggtccctcacttttttctccgtttgccaaataaatcccgaactgttaactt 349  Q
    |||||| ||||||||||||||||| || || |||||||||  || |||||||||||||  |||  ||||||  | ||||||||||||   || |||| ||    
T  38696334 taattttaagttttcattttggtctcataactaataaaactcatgttttggtccctcaagtttgcctccgtcggtcaaataaatcccttgctattaagtt 38696433  T
Q  350 taactccaaatgtctatggtagaccaaccttaaaagtggtccatcgtagaccttattaattttattaattttaac 424  Q
    |||| | |||||||||||||||||||||||||||||||||||| | |||| || |||||||||  ||||||||||    
T  38696434 taaccctaaatgtctatggtagaccaaccttaaaagtggtccaccatagatctaattaatttttataattttaac 38696508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 250 - 410
Target Start/End: Original strand, 42877645 - 42877804
Alignment:
Q  250 taatttcaagttttcattttggtcccacaattaataaaacgtatcttttggtccctcacttttttctccgtttgccaaataaatcccgaactgttaactt 349  Q
    |||||||||||||||||||||||| || || |||||||||  || |||||||||||||| ||| ||| |||  | ||||||||||||| || ||||||||    
T  42877645 taatttcaagttttcattttggtctcataactaataaaactcatgttttggtccctcacgtttgtcttcgtcagtcaaataaatcccg-acggttaactt 42877743  T
Q  350 taactccaaatgtctatggtagaccaaccttaaaagtggtccatcgtagaccttattaatt 410  Q
    |||| |||||||| |||||| |||||||||||| | ||||||| | |||| | ||||||||    
T  42877744 taaccccaaatgtgtatggtggaccaaccttaagaatggtccaccatagatcctattaatt 42877804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 222 - 420
Target Start/End: Complemental strand, 32695393 - 32695193
Alignment:
Q  222 ggcttatttgatcgaatggtccctcaaataatttcaagttttcattttggtcccacaattaataaaacgtatcttttggtccctcacttttttctccgtt 321  Q
    ||||||||||||  | |||||||||||||||||||||||||||||||||||| ||||||||||||||||||  |||  |||| |||| |||| ||| |||    
T  32695393 ggcttatttgattcattggtccctcaaataatttcaagttttcattttggtctcacaattaataaaacgtacgtttaagtccttcacgttttcctctgtt 32695294  T
Q  322 tgccaaataaatcccgaactgttaactttaactccaa---atgtctatggtagaccaaccttaaaagtggtccatcgtagaccttattaattttattaat 418  Q
    |||||||| | ||| | || ||||| |||||| ||||   |||||||||||  ||||| ||||| | ||||||| | |||| | |||||||| | |||||    
T  32695293 tgccaaattagtcctg-accgttaagtttaaccccaaatgatgtctatggtgaaccaatcttaagattggtccaccatagatcctattaattattttaat 32695195  T
Q  419 tt 420  Q
    ||    
T  32695194 tt 32695193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 222 - 410
Target Start/End: Original strand, 42098561 - 42098750
Alignment:
Q  222 ggcttatttgatcgaatggtccctcaaataatttcaagttttcattttggtcccacaattaataaaacgtatc-ttttggtccctcacttttttctccgt 320  Q
    |||||||| |||||  |||||||| |  |||||||| |||||||||||||||||||||||||||||| ||  | ||||| |||| ||| ||| |||||||    
T  42098561 ggcttattagatcgtttggtcccttatttaatttcatgttttcattttggtcccacaattaataaaa-gtggcgttttgatcccccacgtttgtctccgt 42098659  T
Q  321 ttgccaaataaatcccgaactgttaactttaactccaaatg---tctatggtagaccaaccttaaaagtggtccatcgtagaccttattaatt 410  Q
    |||||||||||||||   |||||||| |||||| |||||||   ||| |||| |||||||||||||||||||||| | |||| | ||||||||    
T  42098660 ttgccaaataaatccg--actgttaattttaaccccaaatgatgtctttggtggaccaaccttaaaagtggtccaccatagatcctattaatt 42098750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 218 - 423
Target Start/End: Complemental strand, 212834 - 212630
Alignment:
Q  218 ttttggcttatttgatcgaatggtccctcaaataatttcaagttttcattttggtcccacaattaataaaacgtatcttttggtccctcacttttttctc 317  Q
    ||||||||||||||||| | | ||||| ||||||||||||  |||||||||| ||||||||||||| |||||   | |||| |||||||||||||| ||     
T  212834 ttttggcttatttgatccattagtcccccaaataatttcagattttcattttcgtcccacaattaaaaaaacaggtgttttagtccctcactttttcctt 212735  T
Q  318 cgtttgccaaataaatcccgaactgttaactttaactccaaatgtctatggtagaccaaccttaaaagtggtccatcgtagaccttattaattttattaa 417  Q
    |||||| ||||||||||      ||||||||||||| ||||||||||||||  || |||| ||| |  ||||||  ||||||| |||| |||||| ||||    
T  212734 cgtttgtcaaataaatctatgggtgttaactttaaccccaaatgtctatgg-ggatcaacattatagatggtccgccgtagactttatcaattttgttaa 212636  T
Q  418 ttttaa 423  Q
    ||||||    
T  212635 ttttaa 212630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 218 - 423
Target Start/End: Original strand, 239420 - 239624
Alignment:
Q  218 ttttggcttatttgatcgaatggtccctcaaataatttcaagttttcattttggtcccacaattaataaaacgtatcttttggtccctcacttttttctc 317  Q
    ||||||||||||||||| | | ||||| ||||||||||||  |||||||||| ||||||||||||| |||||   | |||| |||||||||||||| ||     
T  239420 ttttggcttatttgatccattagtcccccaaataatttcagattttcattttcgtcccacaattaaaaaaacaggtgttttagtccctcactttttcctt 239519  T
Q  318 cgtttgccaaataaatcccgaactgttaactttaactccaaatgtctatggtagaccaaccttaaaagtggtccatcgtagaccttattaattttattaa 417  Q
    |||||| ||||||||||      ||||||||||||| ||||||||||||||  || |||| ||| |  ||||||  ||||||| |||| |||||| ||||    
T  239520 cgtttgtcaaataaatctatgggtgttaactttaaccccaaatgtctatgg-ggatcaacattatagatggtccgccgtagactttatcaattttgttaa 239618  T
Q  418 ttttaa 423  Q
    ||||||    
T  239619 ttttaa 239624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 218 - 423
Target Start/End: Complemental strand, 726457 - 726253
Alignment:
Q  218 ttttggcttatttgatcgaatggtccctcaaataatttcaagttttcattttggtcccacaattaataaaacgtatcttttggtccctcacttttttctc 317  Q
    ||||||||||||||||| | | ||||| ||||||||||||  |||||||||| ||||||||||||| |||||   | |||| |||||||||||||| ||     
T  726457 ttttggcttatttgatccattagtcccccaaataatttcagattttcattttcgtcccacaattaaaaaaacaggtgttttagtccctcactttttcctt 726358  T
Q  318 cgtttgccaaataaatcccgaactgttaactttaactccaaatgtctatggtagaccaaccttaaaagtggtccatcgtagaccttattaattttattaa 417  Q
    |||||| ||||||||||      ||||||||||||| ||||||||||||||  || |||| ||| |  ||||||  ||||||| |||| |||||| ||||    
T  726357 cgtttgtcaaataaatctatgggtgttaactttaaccccaaatgtctatgg-ggatcaacattatagatggtccgccgtagactttatcaattttgttaa 726259  T
Q  418 ttttaa 423  Q
    ||||||    
T  726258 ttttaa 726253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 218 - 423
Target Start/End: Original strand, 792775 - 792979
Alignment:
Q  218 ttttggcttatttgatcgaatggtccctcaaataatttcaagttttcattttggtcccacaattaataaaacgtatcttttggtccctcacttttttctc 317  Q
    ||||||||||||||||| | | ||||| ||||||||||||  |||||||||| ||||||||||||| |||||   | |||| |||||||||||||| ||     
T  792775 ttttggcttatttgatccattagtcccccaaataatttcagattttcattttcgtcccacaattaaaaaaacaggtgttttagtccctcactttttcctt 792874  T
Q  318 cgtttgccaaataaatcccgaactgttaactttaactccaaatgtctatggtagaccaaccttaaaagtggtccatcgtagaccttattaattttattaa 417  Q
    |||||| ||||||||||      ||||||||||||| ||||||||||||||  || |||| ||| |  ||||||  ||||||| |||| |||||| ||||    
T  792875 cgtttgtcaaataaatctatgggtgttaactttaaccccaaatgtctatgg-ggatcaacattatagatggtccgccgtagactttatcaattttgttaa 792973  T
Q  418 ttttaa 423  Q
    ||||||    
T  792974 ttttaa 792979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 218 - 423
Target Start/End: Complemental strand, 798958 - 798754
Alignment:
Q  218 ttttggcttatttgatcgaatggtccctcaaataatttcaagttttcattttggtcccacaattaataaaacgtatcttttggtccctcacttttttctc 317  Q
    ||||||||||||||||| | | ||||| ||||||||||||  |||||||||| ||||||||||||| |||||   | |||| |||||||||||||| ||     
T  798958 ttttggcttatttgatccattagtcccccaaataatttcagattttcattttcgtcccacaattaaaaaaacaggtgttttagtccctcactttttcctt 798859  T
Q  318 cgtttgccaaataaatcccgaactgttaactttaactccaaatgtctatggtagaccaaccttaaaagtggtccatcgtagaccttattaattttattaa 417  Q
    |||||| ||||||||||      ||||||||||||| ||||||||||||||  || |||| ||| |  ||||||  ||||||| |||| |||||| ||||    
T  798858 cgtttgtcaaataaatctatgggtgttaactttaaccccaaatgtctatgg-ggatcaacattatagatggtccgccgtagactttatcaattttgttaa 798760  T
Q  418 ttttaa 423  Q
    ||||||    
T  798759 ttttaa 798754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 222 - 361
Target Start/End: Complemental strand, 41630242 - 41630105
Alignment:
Q  222 ggcttatttgatcgaatggtccctcaaataatttcaagttttcattttggtcccacaattaataaaacgtatcttttggtccctcacttttttctccgtt 321  Q
    ||||||||||||| |||||| ||| ||||||||| || |||||||||| ||| |||||||||||||||||| ||||  |||||||| ||||||||  |||    
T  41630242 ggcttatttgatccaatggttccttaaataattttaaattttcattttagtctcacaattaataaaacgtacctttaagtccctcaattttttctatgtt 41630143  T
Q  322 tgccaaataaatcccgaactgttaactttaactccaaatg 361  Q
    ||  ||||||||||||||  ||||| |||||| |||||||    
T  41630142 tgttaaataaatcccgaa--gttaagtttaaccccaaatg 41630105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 241 - 336
Target Start/End: Original strand, 211612 - 211707
Alignment:
Q  241 tccctcaaataatttcaagttttcattttggtcccacaattaataaaacgtatcttttggtccctcacttttttctccgtttgccaaataaatccc 336  Q
    ||||| ||||||||||| |||||||||||||||||||||||||||||||  |  |||| |||||| | |||||||||||||| |||||||||||||    
T  211612 tcccttaaataatttcatgttttcattttggtcccacaattaataaaacagacgttttagtcccttaattttttctccgtttaccaaataaatccc 211707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 241 - 336
Target Start/End: Complemental strand, 240644 - 240549
Alignment:
Q  241 tccctcaaataatttcaagttttcattttggtcccacaattaataaaacgtatcttttggtccctcacttttttctccgtttgccaaataaatccc 336  Q
    ||||| ||||||||||| |||||||||||||||||||||||||||||||  |  |||| |||||| | |||||||||||||| |||||||||||||    
T  240644 tcccttaaataatttcatgttttcattttggtcccacaattaataaaacagacgttttagtcccttaattttttctccgtttaccaaataaatccc 240549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 241 - 336
Target Start/End: Original strand, 725235 - 725330
Alignment:
Q  241 tccctcaaataatttcaagttttcattttggtcccacaattaataaaacgtatcttttggtccctcacttttttctccgtttgccaaataaatccc 336  Q
    ||||| ||||||||||| |||||||||||||||||||||||||||||||  |  |||| |||||| | |||||||||||||| |||||||||||||    
T  725235 tcccttaaataatttcatgttttcattttggtcccacaattaataaaacagacgttttagtcccttaattttttctccgtttaccaaataaatccc 725330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 241 - 336
Target Start/End: Complemental strand, 793999 - 793904
Alignment:
Q  241 tccctcaaataatttcaagttttcattttggtcccacaattaataaaacgtatcttttggtccctcacttttttctccgtttgccaaataaatccc 336  Q
    ||||| ||||||||||| |||||||||||||||||||||||||||||||  |  |||| |||||| | |||||||||||||| |||||||||||||    
T  793999 tcccttaaataatttcatgttttcattttggtcccacaattaataaaacagacgttttagtcccttaattttttctccgtttaccaaataaatccc 793904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 212 - 320
Target Start/End: Complemental strand, 13198070 - 13197961
Alignment:
Q  212 aatttatt-ttggcttatttgatcgaatggtccctcaaataatttcaagttttcattttggtcccacaattaataaaacgtatcttttggtccctcactt 310  Q
    |||||||| |||||||||||| || |||||||| | |||||||||| ||||||| ||||||||||||||||||||||| |||  |||  |||||||||||    
T  13198070 aatttattattggcttatttgctccaatggtccattaaataatttcgagttttcgttttggtcccacaattaataaaaggtacgtttaagtccctcactt 13197971  T
Q  311 ttttctccgt 320  Q
    ||| ||||||    
T  13197970 tttcctccgt 13197961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 222 - 360
Target Start/End: Complemental strand, 17339667 - 17339530
Alignment:
Q  222 ggcttatttgatcgaatggtccctcaaataatttcaagttttcattttggtcccacaattaataaaacgtatcttttggtccctcacttttttctccgtt 321  Q
    |||||||| |||||  |||||||| |  ||||||||  ||||||||||||||| |||||||||||||      |||| ||||||||| |||| |||||||    
T  17339667 ggcttattagatcgtttggtcccttatttaatttcatattttcattttggtccaacaattaataaaaatggcattttagtccctcacgttttcctccgtt 17339568  T
Q  322 tgccaaataaatcccgaactgttaactttaactccaaat 360  Q
    |||||||||||||| | |||||||| |||||||||||||    
T  17339567 tgccaaataaatcctg-actgttaagtttaactccaaat 17339530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 216 - 386
Target Start/End: Complemental strand, 17702399 - 17702227
Alignment:
Q  216 tattttggcttatttgatcgaatggtccctcaaataatttcaagttttcattttggtcccacaattaataaaacgtatcttttggtccctcacttttttc 315  Q
    |||||||||||| |||||  | |||||||| || ||||||| | ||||||||||||||||| || ||||||||| ||| |||||||||||||  ||  ||    
T  17702399 tattttggcttacttgatttattggtcccttaattaatttccaattttcattttggtcccataactaataaaacctatgttttggtccctcaagttcatc 17702300  T
Q  316 tccgtttgcc--aaataaatcccgaactgttaactttaactccaaatgtctatggtagaccaaccttaaaagt 386  Q
    ||| |||| |  ||| ||||| |  || ||||||||||||  |||||||||||||| ||  ||||||||||||    
T  17702299 tccatttgtcaaaaagaaatctctgaccgttaactttaacctcaaatgtctatggtggatgaaccttaaaagt 17702227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 250 - 334
Target Start/End: Original strand, 17338067 - 17338151
Alignment:
Q  250 taatttcaagttttcattttggtcccacaattaataaaacgtatcttttggtccctcacttttttctccgtttgccaaataaatc 334  Q
    |||||||| ||||||||||||||||||||||||||||||      |||| ||||||||| |||||||||||||||||||||||||    
T  17338067 taatttcatgttttcattttggtcccacaattaataaaaatggcgttttagtccctcacatttttctccgtttgccaaataaatc 17338151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 341 - 460
Target Start/End: Original strand, 17455164 - 17455283
Alignment:
Q  341 tgttaactttaactccaaatgtctatggtagaccaaccttaaaagtggtccatcgtagaccttattaattttattaattttaacagttcgatctatttat 440  Q
    |||||||||||||| ||||| |||||| |||||||| ||||||||||||||| | |||| |||||||||| | ||||||| ||| |||  |||||||| |    
T  17455164 tgttaactttaacttcaaatatctatgctagaccaatcttaaaagtggtccaccatagatcttattaattattttaatttgaaccgttttatctattttt 17455263  T
Q  441 cataataggaccgttagatt 460  Q
     | || |||||| |||||||    
T  17455264 taaaagaggaccattagatt 17455283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 241 - 412
Target Start/End: Original strand, 45394984 - 45395155
Alignment:
Q  241 tccctcaaataatttcaagttttcattttggtcccacaattaataaaacgtatcttttggtccctcacttttttctccgtttgccaaataaatcccgaac 340  Q
    ||||| || |||||| |||||||||||||| ||||| ||||||||||||  || |||||||  || | || | |||| ||    ||||||||||||  ||    
T  45394984 tcccttaattaattttaagttttcattttgatcccataattaataaaactcatgttttggttacttaattgtctctctgtcgatcaaataaatccctgac 45395083  T
Q  341 tgttaactttaactccaaatgtctatggtagaccaaccttaaaagtggtccatcgtagaccttattaatttt 412  Q
     ||||||||||||||||||| |||||||| ||||||  ||  | |||||||||| |||||| ||||||||||    
T  45395084 ggttaactttaactccaaatatctatggtggaccaatattgtaggtggtccatcatagaccgtattaatttt 45395155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 222 - 410
Target Start/End: Complemental strand, 13117751 - 13117562
Alignment:
Q  222 ggcttatttgatcgaatggtccctcaaataatttcaagttttcattttggtcccacaattaataaaacgtatcttttggtccctcacttttttctccgtt 321  Q
    |||||||| |||||  |||||||| |  |||||||| |||||||||||||||||| |||||||||||      |||| ||||||||| |||| ||| |||    
T  13117751 ggcttattagatcgtttggtcccttatttaatttcatgttttcattttggtcccataattaataaaaatggcgttttagtccctcacattttcctctgtt 13117652  T
Q  322 tgccaaataaatcccgaactgttaactttaactccaaatg---tctatggtagaccaaccttaaaagtggtccatcgtagaccttattaatt 410  Q
    |||||||||||||||| ||  | || |||||| |||||||   | ||| || ||||||| |||||||||||||||| |||| | ||||||||    
T  13117651 tgccaaataaatcccg-accatcaagtttaac-ccaaatgatctatatagtggaccaactttaaaagtggtccatcatagatcctattaatt 13117562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 260 - 377
Target Start/End: Complemental strand, 26697912 - 26697796
Alignment:
Q  260 ttttcattttggtcccacaattaataaaacgtatcttttggtccctcacttttttctccgtttgccaaataaatcccgaactgttaactttaactccaaa 359  Q
    |||||||||| |||||| |||||||||||||||  |||| ||||||||||||||  ||| |||| | ||||||| || || |||||| |||||| |||||    
T  26697912 ttttcattttagtcccataattaataaaacgtacgttttagtccctcactttttcttccttttgtcgaataaat-cctaattgttaagtttaaccccaaa 26697814  T
Q  360 tgtctatggtagaccaac 377  Q
    ||| |||||| |||||||    
T  26697813 tgtttatggtggaccaac 26697796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 250 - 369
Target Start/End: Complemental strand, 41743705 - 41743586
Alignment:
Q  250 taatttcaagttttcattttggtcccacaattaataaaacgtatcttttggtccctcacttttttctccgtttgccaaataaatcccgaactgttaactt 349  Q
    |||||| |||||||||||||||||||| || ||||||||| ||| ||||||||| | | || |||||||||  | |||| ||||| |  |||||||| ||    
T  41743705 taattttaagttttcattttggtcccataagtaataaaacttatgttttggtcctttaattgtttctccgtcggtcaaaaaaatctcacactgttaagtt 41743606  T
Q  350 taactccaaatgtctatggt 369  Q
    ||||||||| || |||||||    
T  41743605 taactccaagtgcctatggt 41743586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 250 - 420
Target Start/End: Complemental strand, 14840989 - 14840819
Alignment:
Q  250 taatttcaagttttcattttggtcccacaattaataaaacgtatcttttggtccctcacttttttctccgtttgccaaataaatcccgaactgttaactt 349  Q
    ||||||||| ||||||||||||| ||| || ||||||||   || |||||||||||||  ||| ||||||| |  |||||||||| |    | |||| ||    
T  14840989 taatttcaaattttcattttggtaccataactaataaaattcatgttttggtccctcatatttgtctccgtctatcaaataaatctctcgttcttaagtt 14840890  T
Q  350 taactccaaatgtctatggtagaccaaccttaaaagtggtccatcgtagaccttattaattttattaattt 420  Q
    ||||  |||||||||||||| ||||||| ||||||||| |||| | |||  |||||||| ||| |||||||    
T  14840889 taaccacaaatgtctatggtggaccaacattaaaagtgatccaccatagttcttattaaattttttaattt 14840819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 250 - 360
Target Start/End: Complemental strand, 45437572 - 45437462
Alignment:
Q  250 taatttcaagttttcattttggtcccacaattaataaaacgtatcttttggtccctcacttttttctccgtttgccaaataaatcccgaactgttaactt 349  Q
    ||||||||||||||||||||| ||||| ||||||||||||  || ||||||||||||   |||  ||||| | | ||||||||||||  |||||||| ||    
T  45437572 taatttcaagttttcattttgatcccataattaataaaactcatgttttggtccctcgtgtttgcctccgctagtcaaataaatccctgactgttaagtt 45437473  T
Q  350 taactccaaat 360  Q
    |||| ||||||    
T  45437472 taaccccaaat 45437462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 222 - 270
Target Start/End: Complemental strand, 12850513 - 12850465
Alignment:
Q  222 ggcttatttgatcgaatggtccctcaaataatttcaagttttcattttg 270  Q
    ||||||||||||| ||||||||||||||||||||||| |||||||||||    
T  12850513 ggcttatttgatccaatggtccctcaaataatttcaaattttcattttg 12850465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 236 - 419
Target Start/End: Complemental strand, 24192767 - 24192584
Alignment:
Q  236 aatggtccctcaaataatttcaagttttcattttggtcccacaattaataaaacgtatc-ttttggtccctcacttttttctccgtttgccaaataaatc 334  Q
    ||||||||||||| ||||||| ||||||| ||||||||||| || |  |||||   ||| |||||||| ||||  |||| |||||||   |||| |  ||    
T  24192767 aatggtccctcaattaatttcgagttttcgttttggtcccataactcttaaaa-tcatcattttggtctctcaacttttactccgttaatcaaaaaggtc 24192669  T
Q  335 ccgaactgttaactttaactccaaatgtctatggtagaccaaccttaaaagtggtccatcgtagaccttattaattttattaatt 419  Q
    |   ||||||||||||||| | ||||||||||||| |||||||||||| ||||||||| | |||| | |||||||| | ||||||    
T  24192668 cttgactgttaactttaaccctaaatgtctatggtggaccaaccttaagagtggtccaccatagatcctattaattattttaatt 24192584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 264 - 335
Target Start/End: Original strand, 29103527 - 29103598
Alignment:
Q  264 cattttggtcccacaattaataaaacgtatcttttggtccctcacttttttctccgtttgccaaataaatcc 335  Q
    |||||||||||||||||||||||||||||  |||  |||||||| ||||| ||||| |||| ||||||||||    
T  29103527 cattttggtcccacaattaataaaacgtacatttgagtccctcattttttcctccgattgctaaataaatcc 29103598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 255 - 334
Target Start/End: Complemental strand, 29104450 - 29104371
Alignment:
Q  255 tcaagttttcattttggtcccacaattaataaaacgtatcttttggtccctcacttttttctccgtttgccaaataaatc 334  Q
    |||| |||| |||||| |||||||||||||||||||||| |||  |||||||| ||||| ||| ||||| ||||||||||    
T  29104450 tcaaatttttattttgatcccacaattaataaaacgtatgtttaagtccctcattttttcctctgtttgtcaaataaatc 29104371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 339 - 412
Target Start/End: Complemental strand, 42362751 - 42362678
Alignment:
Q  339 actgttaactttaactccaaatgtctatggtagaccaaccttaaaagtggtccatcgtagaccttattaatttt 412  Q
    |||||||||||||| |||| ||||||||||| ||||||| |||| |||||| |||| |||| | ||||||||||    
T  42362751 actgttaactttaattccagatgtctatggtggaccaacattaagagtggttcatcatagatcctattaatttt 42362678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 238 - 334
Target Start/End: Complemental strand, 38697108 - 38697012
Alignment:
Q  238 tggtccctcaaataatttcaagttttcattttggtcccacaattaataaaacgtatcttttggtccctcacttttttctccgtttgccaaataaatc 334  Q
    ||||||||||| ||||||| ||||||||||||||||||| || |||||||||  || ||||| ||| |||| |||  ||||||  | ||||||||||    
T  38697108 tggtccctcaattaatttccagttttcattttggtcccataactaataaaactcatgttttgatccttcacatttgcctccgtcggtcaaataaatc 38697012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 236 - 276
Target Start/End: Original strand, 10667981 - 10668021
Alignment:
Q  236 aatggtccctcaaataatttcaagttttcattttggtccca 276  Q
    ||||||||||||| ||||||| |||||||||||||||||||    
T  10667981 aatggtccctcaactaatttcgagttttcattttggtccca 10668021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 340 - 392
Target Start/End: Complemental strand, 10669445 - 10669393
Alignment:
Q  340 ctgttaactttaactccaaatgtctatggtagaccaaccttaaaagtggtcca 392  Q
    ||||||||||||||  ||||||||||||||  ||||||||||| |||||||||    
T  10669445 ctgttaactttaacctcaaatgtctatggtgaaccaaccttaagagtggtcca 10669393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 341 - 412
Target Start/End: Original strand, 24305159 - 24305230
Alignment:
Q  341 tgttaactttaactccaaatgtctatggtagaccaaccttaaaagtggtccatcgtagaccttattaatttt 412  Q
    ||||||||||||| | ||||||||||||| ||||||| |||| |||| || ||| |||| | ||||||||||    
T  24305159 tgttaactttaaccctaaatgtctatggtggaccaacattaagagtgatctatcttagatcctattaatttt 24305230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 369 - 420
Target Start/End: Complemental strand, 40437567 - 40437516
Alignment:
Q  369 tagaccaaccttaaaagtggtccatcgtagaccttattaattttattaattt 420  Q
    |||||||||||||||||||||||| |||||| | |||||||| | |||||||    
T  40437567 tagaccaaccttaaaagtggtccaccgtagatcctattaattattttaattt 40437516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 260 - 334
Target Start/End: Complemental strand, 6398577 - 6398503
Alignment:
Q  260 ttttcattttggtcccacaattaataaaacgtatcttttggtccctcacttttttctccgtttgccaaataaatc 334  Q
    |||||||||||||| || ||||||||||||     |||| |||||||| ||||| ||||||||| ||||||||||    
T  6398577 ttttcattttggtctcataattaataaaacaagcgttttagtccctcattttttcctccgtttgtcaaataaatc 6398503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 342 - 410
Target Start/End: Complemental strand, 9854878 - 9854809
Alignment:
Q  342 gttaactttaactcc-aaatgtctatggtagaccaaccttaaaagtggtccatcgtagaccttattaatt 410  Q
    |||||||||||| || ||||||||||||| ||||||| |||| ||||||||| | |||| | ||||||||    
T  9854878 gttaactttaacccccaaatgtctatggtggaccaactttaagagtggtccaccatagatcctattaatt 9854809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 379 - 424
Target Start/End: Original strand, 13513572 - 13513617
Alignment:
Q  379 ttaaaagtggtccatcgtagaccttattaattttattaattttaac 424  Q
    |||||||||||||| | || |||||||||||||| |||||||||||    
T  13513572 ttaaaagtggtccaccatataccttattaatttttttaattttaac 13513617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 379 - 424
Target Start/End: Original strand, 13603105 - 13603150
Alignment:
Q  379 ttaaaagtggtccatcgtagaccttattaattttattaattttaac 424  Q
    |||||||||||||| | || |||||||||||||| |||||||||||    
T  13603105 ttaaaagtggtccaccatataccttattaatttttttaattttaac 13603150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 348 - 424
Target Start/End: Complemental strand, 24069441 - 24069365
Alignment:
Q  348 tttaactccaaatgtctatggtagaccaaccttaaaagtggtccatcgtagaccttattaattttattaattttaac 424  Q
    |||||| | ||||||||| ||| ||||||| ||| | |||||||| | ||||||||| ||| ||| |||||||||||    
T  24069441 tttaacactaaatgtctaaggtggaccaacattataggtggtccaccatagaccttactaagttttttaattttaac 24069365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 348 - 424
Target Start/End: Complemental strand, 34617190 - 34617114
Alignment:
Q  348 tttaactccaaatgtctatggtagaccaaccttaaaagtggtccatcgtagaccttattaattttattaattttaac 424  Q
    |||||| | |||||| || ||| ||||||| ||| | |||||||| ||||||||||| ||| ||| |||||||||||    
T  34617190 tttaaccctaaatgtataaggtggaccaacattacaggtggtccaccgtagaccttactaaattttttaattttaac 34617114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077 (Bit Score: 117; Significance: 3e-59; HSPs: 2)
Name: scaffold0077
Description:

Target: scaffold0077; HSP #1
Raw Score: 117; E-Value: 3e-59
Query Start/End: Original strand, 250 - 442
Target Start/End: Original strand, 52618 - 52809
Alignment:
Q  250 taatttcaagttttcattttggtcccacaattaataaaacgtatcttttggtccctcacttttttctccgtttgccaaataaatcccgaactgttaactt 349  Q
    ||||||||||||||||||||| ||||||||||||||||| |||  |||||||||||||  |||||||||||||||||||||||||||| || ||||||||    
T  52618 taatttcaagttttcattttgatcccacaattaataaaatgtacgttttggtccctcagatttttctccgtttgccaaataaatcccg-acagttaactt 52716  T
Q  350 taactccaaatgtctatggtagaccaaccttaaaagtggtccatcgtagaccttattaattttattaattttaacagttcgatctatttatca 442  Q
    |||||  |||||| |||||| |||||||||||||| ||||| || |||||||||||||||||| ||||||||| | |||||||||||||||||    
T  52717 taactttaaatgtatatggtggaccaaccttaaaaatggtctatggtagaccttattaattttcttaattttatccgttcgatctatttatca 52809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077; HSP #2
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 217 - 420
Target Start/End: Complemental strand, 54308 - 54103
Alignment:
Q  217 attttggcttatttgatcgaatggtccctcaaataatttcaagttttcattttggtcccacaattaataaaacgtatcttttggtccctcacttttttct 316  Q
    |||| ||||||||||||| | |||||||||||||||||||||||||| ||||||||| |||||||||||||||||   |||||||||||||  |||| ||    
T  54308 atttaggcttatttgatccattggtccctcaaataatttcaagttttaattttggtcgcacaattaataaaacgtgcgttttggtccctcaaattttcct 54209  T
Q  317 ccgtttgccaaataaatcccgaactgttaactttaactccaa---atgtctatggtagaccaaccttaaaagtggtccatcgtagaccttattaatttta 413  Q
    ||||||||||||||||||  | |||||||| | |||| ||||   ||||||||||| |||||||||||||||||||||| | |||| | |||||||| |     
T  54208 ccgtttgccaaataaatcgtg-actgttaagtataaccccaaatgatgtctatggtggaccaaccttaaaagtggtccaccatagatcctattaattatt 54110  T
Q  414 ttaattt 420  Q
    |||||||    
T  54109 ttaattt 54103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 116; Significance: 1e-58; HSPs: 2)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 116; E-Value: 1e-58
Query Start/End: Original strand, 223 - 420
Target Start/End: Complemental strand, 125350 - 125150
Alignment:
Q  223 gcttatttgatcgaatggtccctcaaataatttcaagttttcattttggtcccacaattaataaaacgtatcttttggtccctcacttttttctccgttt 322  Q
    |||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||    
T  125350 gcttatttgatccaatggtccctcaaataatttcaaattttcattttggtcccacaattaataaaacgtaccttttggtccctcactttttcctccgttt 125251  T
Q  323 gccaaataaatcccgaactgttaactttaactccaa---atgtctatggtagaccaaccttaaaagtggtccatcgtagaccttatt-aattttattaat 418  Q
    ||||||||||| || ||| ||||| |||||| ||||   |||| |||| | |||||||||||||||||||||| | ||||||||||| |||||| |||||    
T  125250 gccaaataaat-cctaacggttaagtttaaccccaaatgatgtatatgatggaccaaccttaaaagtggtccaccatagaccttattaaatttttttaat 125152  T
Q  419 tt 420  Q
    ||    
T  125151 tt 125150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031; HSP #2
Raw Score: 111; E-Value: 1e-55
Query Start/End: Original strand, 218 - 392
Target Start/End: Original strand, 123963 - 124136
Alignment:
Q  218 ttttggcttatttgatcgaatggtccctcaaataatttcaagttttcattttggtcccacaattaataaaacgtatcttttggtccctcacttttttctc 317  Q
    ||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||| |||    
T  123963 ttttggcttatttgatccaatggtccttcaaataatttcaagttttcattttggtcccacaattaataaaacgtacattttggtccctcactttttcctc 124062  T
Q  318 cgtttgccaaataaatcccgaactgttaactttaactccaaatgtctatggtagaccaaccttaaaagtggtcca 392  Q
     ||||||||||||||| ||  || ||||| |||||| |||||| |||||||| |||||||||||| |||||||||    
T  124063 tgtttgccaaataaat-ccttacggttaagtttaaccccaaatatctatggtggaccaaccttaagagtggtcca 124136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 103; Significance: 6e-51; HSPs: 31)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 103; E-Value: 6e-51
Query Start/End: Original strand, 250 - 459
Target Start/End: Complemental strand, 23397444 - 23397235
Alignment:
Q  250 taatttcaagttttcattttggtcccacaattaataaaacgtatcttttggtccctcacttttttctccgtttgccaaataaatcccgaactgttaactt 349  Q
    |||||||  ||||||||||||||||||||||||||||||      |||| ||||||||| |||| |||||||||||||||||||||||| | ||||| ||    
T  23397444 taatttcgtgttttcattttggtcccacaattaataaaaatggcgttttagtccctcaccttttcctccgtttgccaaataaatcccgacc-gttaaatt 23397346  T
Q  350 taactccaaatgtctatggtagaccaaccttaaaagtggtccatcgtagaccttattaattttattaattttaacagttcgatctatttatcataata-g 448  Q
    ||||| |||||||||||||| |||||||||||||||| ||||| |||| |||||||||||||| |||||||||||  | ||||||||||||||||| | |    
T  23397345 taacttcaaatgtctatggtggaccaaccttaaaagtagtccaccgtataccttattaattttgttaattttaaccatccgatctatttatcataaaatg 23397246  T
Q  449 gaccgttagat 459  Q
    |||||||||||    
T  23397245 gaccgttagat 23397235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 101; E-Value: 9e-50
Query Start/End: Original strand, 220 - 459
Target Start/End: Original strand, 29380187 - 29380426
Alignment:
Q  220 ttggcttatttgatcgaatggtccctcaaataatttcaagttttcattttggtcccacaattaataaaacgtatcttttggtccctcacttttttctccg 319  Q
    |||||||||| ||||   |||||||| |  |||||||  ||||||||||||||||||||||||| ||||      |||| ||||||||| ||||  ||||    
T  29380187 ttggcttattagatcatttggtcccttatttaatttcttgttttcattttggtcccacaattaacaaaaatggcgttttagtccctcaccttttcttccg 29380286  T
Q  320 tttgccaaataaatcccgaactgttaactttaactccaaatgtctatggtagaccaaccttaaaagtggtccatcgtagaccttattaattttattaatt 419  Q
    ||||||||||||||||||| | ||||| ||||||| ||||||| |||||| || ||||||||||||| ||||||||||||||||||||||||| ||||||    
T  29380287 tttgccaaataaatcccgacc-gttaattttaacttcaaatgtatatggtggatcaaccttaaaagtagtccatcgtagaccttattaattttgttaatt 29380385  T
Q  420 ttaacagttcgatctatttatcataata-ggaccgttagat 459  Q
    |||||  ||||||||||||||||||| | ||||||||||||    
T  29380386 ttaaccattcgatctatttatcataaaagggaccgttagat 29380426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 222 - 459
Target Start/End: Complemental strand, 17839257 - 17839020
Alignment:
Q  222 ggcttatttgatcgaatggtccctcaaataatttcaagttttcattttggtcccacaattaataaaacgtatcttttggtccctcacttttttctccgtt 321  Q
    |||||||| |||||  |||||||| |  |||||||  ||||||||||||||||||||||||||||||      |||| ||||||||| |||| |||||||    
T  17839257 ggcttattagatcgtttggtcccttatttaatttcttgttttcattttggtcccacaattaataaaaatggcgttttagtccctcaccttttcctccgtt 17839158  T
Q  322 tgccaaataaatcccgaactgttaactttaactccaaatgtctatggtagaccaaccttaaaagtggtccatcgtagaccttattaattttattaatttt 421  Q
    ||||||||||||||||| | ||||| ||||||| |||||||  ||||| ||  |||||||||||| |||||| |||||||||||||||||| ||||||||    
T  17839157 tgccaaataaatcccgacc-gttaattttaacttcaaatgtagatggtggattaaccttaaaagtagtccattgtagaccttattaattttgttaatttt 17839059  T
Q  422 aacagttcgatctatttatcataata-ggaccgttagat 459  Q
    |||  ||||||||||||||||||| | ||||||||||||    
T  17839058 aaccattcgatctatttatcataaaagggaccgttagat 17839020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 223 - 398
Target Start/End: Original strand, 7310275 - 7310449
Alignment:
Q  223 gcttatttgatcgaatggtccctcaaataatttcaagttttcattttggtcccacaattaataaaacgtatcttttggtccctcacttttttctccgttt 322  Q
    |||||||||||| |  ||||| | ||||||||| |||||||||||||||||||| |||||||||||||||| |||  |||| |||  |||||||||||||    
T  7310275 gcttatttgatccatcggtcctttaaataattttaagttttcattttggtcccataattaataaaacgtatgtttaagtccttcaggtttttctccgttt 7310374  T
Q  323 gccaaataaatcccgaactgttaactttaactccaaatgtctatggtagaccaaccttaaaagtggtccatcgtag 398  Q
     ||||||||||| ||  ||||||| ||||||||||||||||||||||  ||||||||||||| |||||||||||||    
T  7310375 accaaataaatctcg-gctgttaagtttaactccaaatgtctatggtgaaccaaccttaaaaatggtccatcgtag 7310449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 220 - 366
Target Start/End: Original strand, 232172 - 232316
Alignment:
Q  220 ttggcttatttgatcgaatggtccctcaaataatttcaagttttcattttggtcccacaattaataaaacgtatcttttggtccctcacttttttctccg 319  Q
    |||||||| | |||| | |||||||| |||||||||||| ||||||||||||||||| ||||||||||||  |  |||| |||||||||||||| |||||    
T  232172 ttggcttaatagatccattggtcccttaaataatttcaatttttcattttggtcccataattaataaaac--acgttttagtccctcactttttcctccg 232269  T
Q  320 tttgccaaataaatcccgaactgttaactttaactccaaatgtctat 366  Q
    ||||||||||||||||| |||||||||||||||||| ||||||||||    
T  232270 tttgccaaataaatcccaaactgttaactttaactctaaatgtctat 232316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 222 - 320
Target Start/End: Original strand, 34023884 - 34023982
Alignment:
Q  222 ggcttatttgatcgaatggtccctcaaataatttcaagttttcattttggtcccacaattaataaaacgtatcttttggtccctcacttttttctccgt 320  Q
    ||||||||||||| |||||||||||||||||||| |||||||||||||||| ||||||||||||||||||| ||||||||||||||| |||| ||||||    
T  34023884 ggcttatttgatcaaatggtccctcaaataattttaagttttcattttggtaccacaattaataaaacgtaccttttggtccctcaccttttcctccgt 34023982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 247 - 418
Target Start/End: Original strand, 12669746 - 12669917
Alignment:
Q  247 aaataatttcaagttttcattttggtcccacaattaataaaacgtatcttttggtccctcacttttttctccgtttgccaaataaatcccgaactgttaa 346  Q
    ||||||| | || |||| ||||||||| |||||||||||||||  |  |||| |||| ||||||||| |||||||||| ||||||||| | |||||||||    
T  12669746 aaataatattaaatttttattttggtctcacaattaataaaactcaagttttagtccgtcactttttcctccgtttgctaaataaatctctaactgttaa 12669845  T
Q  347 ctttaactccaaatgtctatggtagaccaaccttaaaagtggtccatcgtagaccttattaattttattaat 418  Q
    |||||||  ||||||| |||||| |||||||||||| ||||||||| | |||| | ||||| ||||||||||    
T  12669846 ctttaacctcaaatgtgtatggtggaccaaccttaagagtggtccaccatagatcatattatttttattaat 12669917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 222 - 335
Target Start/End: Complemental strand, 6452629 - 6452516
Alignment:
Q  222 ggcttatttgatcgaatggtccctcaaataatttcaagttttcattttggtcccacaattaataaaacgtatcttttggtccctcacttttttctccgtt 321  Q
    ||||||||||||| | |||||||  |||||||||||||||||||||||||||||| |||||||||||||||  |||  |||||||| ||||| |||||||    
T  6452629 ggcttatttgatccattggtcccctaaataatttcaagttttcattttggtcccataattaataaaacgtacgtttgagtccctcattttttcctccgtt 6452530  T
Q  322 tgccaaataaatcc 335  Q
    ||||||||||||||    
T  6452529 tgccaaataaatcc 6452516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 250 - 411
Target Start/End: Original strand, 5186594 - 5186753
Alignment:
Q  250 taatttcaagttttcattttggtcccacaattaataaaacgtatcttttggtccctcacttttttctccgtttgccaaataaatcccgaactgttaactt 349  Q
    |||||||| ||||||||||||||| ||||||||||||||   |  ||||  ||| |||  |||| ||||||||||||||||||||||| || ||||||||    
T  5186594 taatttcatgttttcattttggtcacacaattaataaaagtgacgttttaatccatcatcttttcctccgtttgccaaataaatcccg-accgttaactt 5186692  T
Q  350 taactccaaatgtctatggtagaccaaccttaaaagtggtccatcgtagaccttattaattt 411  Q
    ||||| ||||| ||||||||  || |||||||||| ||||| ||||||||||||||||||||    
T  5186693 taacttcaaatatctatggtgaacaaaccttaaaa-tggtcaatcgtagaccttattaattt 5186753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 220 - 392
Target Start/End: Complemental strand, 7311844 - 7311672
Alignment:
Q  220 ttggcttatttgatcgaatggtccctcaaataatttcaagttttcattttggtcccacaattaataaaacgtatcttttggtccctcacttttttctccg 319  Q
    ||||||||||| ||  |||||||||| ||||||||| |||||||||||||| ||||||||||||| ||||||| |||||||||||| |||||||| ||      
T  7311844 ttggcttatttaattcaatggtcccttaaataattttaagttttcattttgatcccacaattaat-aaacgtaccttttggtcccttacttttttatcta 7311746  T
Q  320 tttgccaaataaatcccgaactgttaactttaactccaa---atgtctatggtagaccaaccttaaaagtggtcca 392  Q
    |||||||||||||| ||  || ||||| ||||| |||||   |||||||||||  ||||||||||| |||||||||    
T  7311745 tttgccaaataaat-cctcacagttaagtttaa-tccaaatgatgtctatggtgaaccaaccttaagagtggtcca 7311672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 250 - 390
Target Start/End: Complemental strand, 32507116 - 32506976
Alignment:
Q  250 taatttcaagttttcattttggtcccacaattaataaaacgtatcttttggtccctcacttttttctccgtttgccaaataaatcccgaactgttaactt 349  Q
    |||||||| |||||||||||| ||||||| |||||||||    | |||| ||||||||| |||||||| |||||||||||||||||   |||||||| ||    
T  32507116 taatttcatgttttcattttgatcccacatttaataaaaatggtgttttagtccctcacatttttctcagtttgccaaataaatccttgactgttaagtt 32507017  T
Q  350 taactccaaatgtctatggtagaccaaccttaaaagtggtc 390  Q
    |||| |||||| |||||||| |||||||||||| |||||||    
T  32507016 taaccccaaatatctatggtggaccaaccttaagagtggtc 32506976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 222 - 331
Target Start/End: Complemental strand, 34024181 - 34024073
Alignment:
Q  222 ggcttatttgatcgaatggtccctcaaataatttcaagttttcattttggtcccacaattaataaaacgtatcttttggtccctcacttttttctccgtt 321  Q
    ||||||||||||| |||| | | |||||||||||||| ||||||||||||||||||||||||||||| |||  ||||| ||||||||||||| |||||||    
T  34024181 ggcttatttgatccaatgattc-tcaaataatttcaaattttcattttggtcccacaattaataaaatgtacattttgatccctcactttttcctccgtt 34024083  T
Q  322 tgccaaataa 331  Q
    || |||||||    
T  34024082 tgtcaaataa 34024073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 222 - 335
Target Start/End: Original strand, 6452282 - 6452395
Alignment:
Q  222 ggcttatttgatcgaatggtccctcaaataatttcaagttttcattttggtcccacaattaataaaacgtatcttttggtccctcacttttttctccgtt 321  Q
    ||||||||| ||| |  ||||||  |||||||||||||||||| ||||||||| | ||||||||||| |||  |||| |||||||||||||| |||||||    
T  6452282 ggcttatttaatccatcggtcccctaaataatttcaagttttcgttttggtcctataattaataaaaggtacgttttagtccctcactttttcctccgtt 6452381  T
Q  322 tgccaaataaatcc 335  Q
    ||||||||||||||    
T  6452382 tgccaaataaatcc 6452395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 225 - 334
Target Start/End: Original strand, 27080925 - 27081034
Alignment:
Q  225 ttatttgatcgaatggtccctcaaataatttcaagttttcattttggtcccacaattaataaaacgtatcttttggtccctcacttttttctccgtttgc 324  Q
    |||||||||| |||| ||||| |||||||||| ||||||||||||||||  |||||||||||||  ||  |||  |||||||||||||||||||||||||    
T  27080925 ttatttgatccaatgatcccttaaataatttcgagttttcattttggtcttacaattaataaaatttacatttaagtccctcacttttttctccgtttgc 27081024  T
Q  325 caaataaatc 334  Q
     |||||||||    
T  27081025 gaaataaatc 27081034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 212 - 334
Target Start/End: Original strand, 6701368 - 6701490
Alignment:
Q  212 aatttattttggcttatttgatcgaatggtccctcaaataatttcaagttttcattttggtcccacaattaataaaacgtatcttttggtccctcacttt 311  Q
    |||||| ||||||||||| |||||  |||||||| |  ||||||||  |||||||||||||||||||||||||||||    | |||| ||||||||| ||    
T  6701368 aatttaatttggcttattagatcgtttggtcccttatttaatttcatattttcattttggtcccacaattaataaaaatggtattttagtccctcacatt 6701467  T
Q  312 tttctccgtttgccaaataaatc 334  Q
    || ||||||||||||||||||||    
T  6701468 ttcctccgtttgccaaataaatc 6701490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 221 - 360
Target Start/End: Complemental strand, 6702989 - 6702852
Alignment:
Q  221 tggcttatttgatcgaatggtccctcaaataatttcaagttttcattttggtcccacaattaataaaacgtatcttttggtccctcacttttttctccgt 320  Q
    ||||||||| |||||  |||||||| |  ||||||||  |||||||||||||||||||||||||||||  |  | |||  |||||||| |||| ||||||    
T  6702989 tggcttattagatcgtttggtcccttatttaatttcatattttcattttggtcccacaattaataaaaa-tggcgttttatccctcacgttttcctccgt 6702891  T
Q  321 ttgccaaataaatcccgaactgttaactttaactccaaat 360  Q
    ||||||||||||||| | |||||||| |||||||||||||    
T  6702890 ttgccaaataaatcctg-actgttaagtttaactccaaat 6702852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 250 - 420
Target Start/End: Original strand, 23392240 - 23392411
Alignment:
Q  250 taatttcaagttttcattttggtcccacaattaataaaacgtatcttttggtccctcacttttttctccgtttgccaaataaatcccgaactgttaactt 349  Q
    |||||||  ||||||||||||||||||||||||||||||      |||  ||||||||| |||| ||||||||||||||||||| || || |||||| ||    
T  23392240 taatttcgtgttttcattttggtcccacaattaataaaaatggcgtttaagtccctcaccttttcctccgtttgccaaataaat-cctaaatgttaagtt 23392338  T
Q  350 taactccaaatg--tctatggtagaccaaccttaaaagtggtccatcgtagaccttattaattttattaattt 420  Q
    |||| |||||||   ||| ||| || ||||||||||||||||||| | |||| | |||||||| | |||||||    
T  23392339 taaccccaaatgatgctaaggtggatcaaccttaaaagtggtccaccatagatcctattaattattttaattt 23392411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 238 - 333
Target Start/End: Complemental strand, 15730132 - 15730036
Alignment:
Q  238 tggtccctcaaataatttcaagttttcattttggtcccacaattaataaaacg-tatcttttggtccctcacttttttctccgtttgccaaataaat 333  Q
    ||||||||||| ||||||| | |||||||||||||||||||||||||||||   ||  |||||||||||||||||||  ||||||||| ||||||||    
T  15730132 tggtccctcaattaatttccatttttcattttggtcccacaattaataaaaaaatacattttggtccctcactttttcttccgtttgctaaataaat 15730036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 238 - 366
Target Start/End: Complemental strand, 233666 - 233543
Alignment:
Q  238 tggtccctcaaataatttcaagttttcattttggtcccacaattaataaaacgtatcttttggtccctcacttttttctccgtttgccaaataaatcccg 337  Q
    |||||| | |||||||||||| ||||||||||||||||| |||||||||||   |  |||| |||||||| |||||||    ||||||||||||||| |     
T  233666 tggtcctttaaataatttcaatttttcattttggtcccataattaataaaaaacacgttttagtccctca-ttttttc----tttgccaaataaatctca 233572  T
Q  338 aactgttaactttaactccaaatgtctat 366  Q
    || ||||||||||||||| ||||||||||    
T  233571 aattgttaactttaactctaaatgtctat 233543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 250 - 420
Target Start/End: Complemental strand, 5187712 - 5187541
Alignment:
Q  250 taatttcaagttttcattttggtcccacaattaataaaacgtatcttttggtccctcacttttttctccgtttgccaaataaatcccgaactgttaactt 349  Q
    |||||||| |||||||||||||||||| |||||||||||      |||| || ||| || ||||| |||||||||||||||||||| || | ||||| ||    
T  5187712 taatttcatgttttcattttggtcccataattaataaaaatggcgttttagttccttacctttttgtccgtttgccaaataaatcctga-cggttaagtt 5187614  T
Q  350 taactccaaatgt---ctatggtagaccaaccttaaaagtggtccatcgtagaccttattaattttattaattt 420  Q
    |||| ||||||||   |||| || ||||||||||||||||||| || | |||| | |||||||| |||||||||    
T  5187613 taac-ccaaatgttgtctatagtggaccaaccttaaaagtggttcaccatagatcctattaattatattaattt 5187541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 224 - 334
Target Start/End: Complemental strand, 27967165 - 27967055
Alignment:
Q  224 cttatttgatcgaatggtccctcaaataatttcaagttttcattttggtcccacaattaataaaacgtatcttttggtccctcacttttttctccgtttg 323  Q
    ||||||||||| ||||||||| ||||||||| | ||||||||||||| |||||||||||||| ||| ||  ||||| ||| | | ||||| || ||||||    
T  27967165 cttatttgatccaatggtcccccaaataattcctagttttcattttgatcccacaattaatagaacatacattttgatcctttaatttttcctacgtttg 27967066  T
Q  324 ccaaataaatc 334  Q
    ||||| |||||    
T  27967065 ccaaaaaaatc 27967055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 222 - 335
Target Start/End: Complemental strand, 2688042 - 2687929
Alignment:
Q  222 ggcttatttgatcgaatggtccctcaaataatttcaagttttcattttggtcccacaattaataaaacgtatcttttggtccctcacttttttctccgtt 321  Q
    |||||||| |||||  |||||||| |  |||||||| ||||||||||| ||||||||||||||||||      |||| ||||||||| ||||| ||||||    
T  2688042 ggcttattagatcgtttggtcccttatttaatttcatgttttcattttagtcccacaattaataaaaatggcgttttagtccctcacctttttatccgtt 2687943  T
Q  322 tgccaaataaatcc 335  Q
    ||||||||||||||    
T  2687942 tgccaaataaatcc 2687929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 224 - 313
Target Start/End: Complemental strand, 27082261 - 27082171
Alignment:
Q  224 cttatttgatcgaatggtccctca-aataatttcaagttttcattttggtcccacaattaataaaacgtatcttttggtccctcacttttt 313  Q
    |||||| |||| ||||||||| |  ||||||||| | ||||||||||||||||||||||||||||| |||| |||  ||||||||||||||    
T  27082261 cttattcgatccaatggtccccctgaataatttcgaattttcattttggtcccacaattaataaaaagtatgtttaagtccctcacttttt 27082171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 218 - 420
Target Start/End: Original strand, 17837610 - 17837813
Alignment:
Q  218 ttttggcttatttgatcgaatggtccctcaaataatttcaagttttcattttggtcccacaattaataaaacgtatcttttggtccctcacttttttctc 317  Q
    |||||||||||| |||||  |||||||| |  ||||||   |||||||||||||| |||||||||||||||      |||| ||||||||  ||||  ||    
T  17837610 ttttggcttattagatcgtttggtcccttatttaatttattgttttcattttggttccacaattaataaaaatggcgttttagtccctcatcttttcttc 17837709  T
Q  318 cgtttgccaaataaatcccgaactgttaactttaactccaa---atgtctatggtagaccaaccttaaaagtggtccatcgtagaccttattaattttat 414  Q
    ||||| ||||||||||||  ||| ||||| |||||| ||||   ||||||||||| ||| ||| |||| ||||||||| | |||| | |||||||| | |    
T  17837710 cgtttaccaaataaatcc--aacagttaagtttaaccccaaatgatgtctatggtggacaaacattaagagtggtccaccatagatcctattaattattt 17837807  T
Q  415 taattt 420  Q
    ||||||    
T  17837808 taattt 17837813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 250 - 336
Target Start/End: Original strand, 2687256 - 2687342
Alignment:
Q  250 taatttcaagttttcattttggtcccacaattaataaaacgtatcttttggtccctcacttttttctccgtttgccaaataaatccc 336  Q
    |||||||| |||||||||||| |||||||||||||||||      |||| |||| |||| |||| ||||||||||||||||||||||    
T  2687256 taatttcatgttttcattttgatcccacaattaataaaaatggcgttttagtccttcacattttcctccgtttgccaaataaatccc 2687342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 250 - 335
Target Start/End: Complemental strand, 18346840 - 18346755
Alignment:
Q  250 taatttcaagttttcattttggtcccacaattaataaaacgtatcttttggtccctcacttttttctccgtttgccaaataaatcc 335  Q
    ||||||||  |||||||||||||||||||||||||||||      ||||| |||||||| ||| |||| |||||||||||||||||    
T  18346840 taatttcatattttcattttggtcccacaattaataaaaatggcgttttgatccctcacgtttgtctctgtttgccaaataaatcc 18346755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 250 - 415
Target Start/End: Original strand, 29722689 - 29722853
Alignment:
Q  250 taatttcaagttttcattttggtcccacaattaataaaacgtatcttttggtccctcacttttttctccgtttgccaaataaatcccgaactgttaactt 349  Q
    |||||||| |||||||||||| ||||| |||||||||||      |||| ||||||||| |||| |||| |||  |||||||||| | ||||||||| ||    
T  29722689 taatttcatgttttcattttgatcccataattaataaaaatggcgttttagtccctcacattttcctccattttgcaaataaatctc-aactgttaaatt 29722787  T
Q  350 taactccaaatgtctatggtagaccaaccttaaaagtggtccatcgtagaccttattaattttatt 415  Q
    |||  | |||||| ||| || ||||||| ||| |  |||| ||| |||||| ||||||||||||||    
T  29722788 taatccaaaatgtatattgtggaccaacattatagatggttcattgtagactttattaattttatt 29722853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 222 - 420
Target Start/End: Complemental strand, 29381848 - 29381649
Alignment:
Q  222 ggcttatttgatcgaatggtccctcaaataatttcaagttttcattttggtcccacaattaataaaacgtatcttttggtccctcacttttttctccgtt 321  Q
    |||||||| |||||  |||||||| |  |||||||   ||||||||||| |||||||||||||||||   |  |||| |||| |||  |||| |||||||    
T  29381848 ggcttattagatcgtttggtcccttatttaatttcttattttcattttgatcccacaattaataaaaatgacgttttagtccttcatcttttcctccgtt 29381749  T
Q  322 tgccaaataaatcccgaactgttaactttaactccaa---atgtctatggtagaccaaccttaaaagtggtccatcgtagaccttattaattttattaat 418  Q
    | ||||||||||||  ||| ||||| |||||| ||||   |||||| |||| ||| |||||||| |||| |||| | |||| | |||||||| | |||||    
T  29381748 taccaaataaatcc--aacagttaagtttaaccccaaatgatgtctgtggtggacaaaccttaagagtgatccaccatagatcctattaattattttaat 29381651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 342 - 420
Target Start/End: Original strand, 11967334 - 11967412
Alignment:
Q  342 gttaactttaactccaaatgtctatggtagaccaaccttaaaagtggtccatcgtagaccttattaattttattaattt 420  Q
    ||||||||||||  ||||||||||| || |||||||||| | || |||||||| |||| | |||||||| | |||||||    
T  11967334 gttaactttaacctcaaatgtctattgtggaccaaccttgagaggggtccatcatagatcatattaattattttaattt 11967412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 348 - 422
Target Start/End: Complemental strand, 27082167 - 27082093
Alignment:
Q  348 tttaactccaaatgtctatggtagaccaaccttaaaagtggtccatcgtagaccttattaattttattaatttta 422  Q
    ||||||||||||||| |||||| ||||||| | | |  || |||| ||||||||||||||||||  |||||||||    
T  27082167 tttaactccaaatgtatatggtggaccaacataatacatgatccaccgtagaccttattaatttatttaatttta 27082093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 338 - 410
Target Start/End: Original strand, 11722899 - 11722972
Alignment:
Q  338 aactgttaactttaactcc-aaatgtctatggtagaccaaccttaaaagtggtccatcgtagaccttattaatt 410  Q
    |||||||||||||||| || ||||||||||||| |||| || |||||| ||||||| | |||| | ||||||||    
T  11722899 aactgttaactttaacccccaaatgtctatggtggaccgactttaaaaatggtccaccatagatcctattaatt 11722972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1152 (Bit Score: 101; Significance: 9e-50; HSPs: 1)
Name: scaffold1152
Description:

Target: scaffold1152; HSP #1
Raw Score: 101; E-Value: 9e-50
Query Start/End: Original strand, 222 - 413
Target Start/End: Complemental strand, 2593 - 2403
Alignment:
Q  222 ggcttatttgatcgaatggtccctcaaataatttcaagttttcattttggtcccacaattaataaaacgtatcttttggtccctcacttttttctccgtt 321  Q
    |||||||| |||| | ||||||||||| ||||||| | ||||||||||||||||||||||||||||| ||| |||||||||||| | ||||| ||| |||    
T  2593 ggcttattagatcaattggtccctcaattaatttcca-ttttcattttggtcccacaattaataaaaagtaccttttggtcccttagtttttcctctgtt 2495  T
Q  322 tgccaaataaatcccgaactgttaactttaactccaaatgtct-atggtagaccaaccttaaaagtggtccatcgtagaccttattaatttta 413  Q
    | |||||||||| ||| |||||||||||||||||||||| | | ||||| |||||||||||||||||||| ||||||||||||||||||||||    
T  2494 ttccaaataaattccg-actgttaactttaactccaaatatgtaatggtggaccaaccttaaaagtggtctatcgtagaccttattaatttta 2403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0118 (Bit Score: 80; Significance: 3e-37; HSPs: 1)
Name: scaffold0118
Description:

Target: scaffold0118; HSP #1
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 238 - 420
Target Start/End: Complemental strand, 43677 - 43493
Alignment:
Q  238 tggtccctcaaataatttcaagttttcattttggtcccacaattaataaaacgtatcttttggtccctcacttttttctccgtttgccaaataaatcccg 337  Q
    |||||||||||||||||| ||||||| |||||||||||| |||||||||||||||| |||  |||||||||||||| ||||||||||||||||| ||| |    
T  43677 tggtccctcaaataattttaagtttttattttggtcccataattaataaaacgtatgtttaagtccctcactttttcctccgtttgccaaataagtcctg 43578  T
Q  338 aactgttaactttaactccaa---atgtctatggtagaccaaccttaaaagtggtccatcgtagaccttattaattttattaattt 420  Q
     || ||||| |||||| ||||   ||||||||||| |||||| ||||| ||||||||| | |||| | |||||||| | |||||||    
T  43577 -acggttaagtttaaccccaagtgatgtctatggtggaccaatcttaagagtggtccaccatagatcctattaattattttaattt 43493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 70; Significance: 3e-31; HSPs: 2)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 225 - 434
Target Start/End: Complemental strand, 63246 - 63037
Alignment:
Q  225 ttatttgatcgaatggtccctcaaataatttcaagttttcattttggtcccacaattaataaaacgtatcttttggtccctcacttttttctccgtttgc 324  Q
    ||||| |||||  ||||||  |||||||||||  |||||||||||||||||||||||||||||       |||| ||||||||| |||||||||||||||    
T  63246 ttattagatcgtttggtcctccaaataatttcgtgttttcattttggtcccacaattaataaagatggcgttttagtccctcacatttttctccgtttgc 63147  T
Q  325 caaataaatcccgaactgttaactttaactccaaatgtctatggtagaccaaccttaaaagtggtccatcgtagaccttattaattttattaattttaac 424  Q
    ||||||||||||  |||||||| ||||||| |||||||||||| | || ||| ||||| | ||||||| | || || | ||||||||| | |||||||||    
T  63146 caaataaatccctgactgttaagtttaacttcaaatgtctatgatggatcaatcttaagaatggtccaccataaacttcattaattttttaaattttaac 63047  T
Q  425 agttcgatct 434  Q
     ||| |||||    
T  63046 cgtttgatct 63037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019; HSP #2
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 238 - 334
Target Start/End: Original strand, 61865 - 61961
Alignment:
Q  238 tggtccctcaaataatttcaagttttcattttggtcccacaattaataaaacgtatcttttggtccctcacttttttctccgtttgccaaataaatc 334  Q
    |||||||  ||||||||||| ||||||||||||||| || |||||||||||      |||| ||||||||  ||||  |||||||||||||||||||    
T  61865 tggtcccctaaataatttcatgttttcattttggtctcataattaataaaaatggcgttttagtccctcatcttttcttccgtttgccaaataaatc 61961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0201 (Bit Score: 69; Significance: 1e-30; HSPs: 1)
Name: scaffold0201
Description:

Target: scaffold0201; HSP #1
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 222 - 434
Target Start/End: Original strand, 21125 - 21337
Alignment:
Q  222 ggcttatttgatcgaatggtccctcaaataatttcaagttttcattttggtcccacaattaataaaacgtatcttttggtccctcacttttttctccgtt 321  Q
    |||||||| |||| | ||| ||||||| ||||||  | |||||||||| |||||| ||||||||||| ||| |||||| ||||| | ||||| |||||||    
T  21125 ggcttattagatccattggcccctcaattaattttcatttttcattttagtcccataattaataaaaagtaccttttgatcccttagtttttcctccgtt 21224  T
Q  322 tgccaaataaatcccgaactgttaactttaactccaaatgtctatggtagaccaaccttaaaagtggtccatcgtagaccttattaattttattaatttt 421  Q
    |||||||||||||      |||||| ||||||  |||||||||||||| |||||||||| | ||||||||| | ||||| | ||||||||| | ||||||    
T  21225 tgccaaataaatcattcgttgttaagtttaaccacaaatgtctatggtggaccaaccttcagagtggtccaccatagacttcattaattttttaaatttt 21324  T
Q  422 aacagttcgatct 434  Q
    ||| ||| |||||    
T  21325 aaccgtttgatct 21337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0078 (Bit Score: 64; Significance: 1e-27; HSPs: 1)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 225 - 336
Target Start/End: Original strand, 18813 - 18924
Alignment:
Q  225 ttatttgatcgaatggtccctcaaataatttcaagttttcattttggtcccacaattaataaaacgtatcttttggtccctcacttttttctccgtttgc 324  Q
    |||||||||| | || ||| | ||||||||| |||||||||||||||||||| | |||||||||| ||| |||| |||||||||||||| ||||||||||    
T  18813 ttatttgatccattgatcctttaaataattttaagttttcattttggtcccatatttaataaaacttatgttttagtccctcactttttactccgtttgc 18912  T
Q  325 caaataaatccc 336  Q
    ||||||||||||    
T  18913 caaataaatccc 18924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 59; Significance: 1e-24; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 250 - 420
Target Start/End: Original strand, 127459 - 127629
Alignment:
Q  250 taatttcaagttttcattttggtcccacaattaataaaacgtatcttttggtccctcacttttttctccgtttgccaaataaatcccgaactgttaactt 349  Q
    ||||||||||||||| ||||||||||| || |||||||||  || |||||||||||||  |||  ||||||  | ||||||||||||  || ||||||||    
T  127459 taatttcaagttttcgttttggtcccataactaataaaactcatgttttggtccctcatgtttgcctccgtcggtcaaataaatccctgacagttaactt 127558  T
Q  350 taactccaaatgtctatggtagaccaaccttaaaagtggtccatcgtagaccttattaattttattaattt 420  Q
    ||||  ||||||||||||||  | ||||||||| ||||||||| | |||| | ||||||| || |||||||    
T  127559 taacctcaaatgtctatggtgaaacaaccttaagagtggtccaccatagatcctattaatgtttttaattt 127629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2071 (Bit Score: 57; Significance: 2e-23; HSPs: 1)
Name: scaffold2071
Description:

Target: scaffold2071; HSP #1
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 250 - 434
Target Start/End: Complemental strand, 771 - 587
Alignment:
Q  250 taatttcaagttttcattttggtcccacaattaataaaacgtatcttttggtccctcacttttttctccgtttgccaaataaatcccgaactgttaactt 349  Q
    ||||||| ||||||||||||||||||| || |||||||||  || |||||||||||||  ||| |||| ||  | ||||||||||||  | ||| || ||    
T  771 taatttccagttttcattttggtcccataactaataaaactcatgttttggtccctcaagtttgtctctgtcggtcaaataaatccctgattgtcaagtt 672  T
Q  350 taactccaaatgtctatggtagaccaaccttaaaagtggtccatcgtagaccttattaattttattaattttaacagttcgatct 434  Q
    ||||  ||||||| |||  | |||||||||||| ||||||||| | ||||||||||||| ||| ||||||| ||| ||| |||||    
T  671 taacctcaaatgtatataatggaccaaccttaagagtggtccaccatagaccttattaaattttttaatttaaaccgtttgatct 587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1251 (Bit Score: 52; Significance: 2e-20; HSPs: 1)
Name: scaffold1251
Description:

Target: scaffold1251; HSP #1
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 238 - 377
Target Start/End: Complemental strand, 1187 - 1048
Alignment:
Q  238 tggtccctcaaataatttcaagttttcattttggtcccacaattaataaaacgtatcttttggtccctcacttttttctccgtttgccaaataaatcccg 337  Q
    ||||||||||||||||||| ||||||||||||||||||| || |||||||||  || |||||||||||||  ||   ||||||  | ||||||||| |      
T  1187 tggtccctcaaataatttccagttttcattttggtcccataagtaataaaactcatgttttggtccctcaaattcacctccgtcagtcaaataaattcat 1088  T
Q  338 aactgttaactttaactccaaatgtctatggtagaccaac 377  Q
       ||||||||||||| ||||||||||||||| |||||||    
T  1087 gggtgttaactttaaccccaaatgtctatggtggaccaac 1048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013 (Bit Score: 43; Significance: 0.000000000000004; HSPs: 1)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 250 - 412
Target Start/End: Original strand, 32598 - 32758
Alignment:
Q  250 taatttcaagttttcattttggtcccacaattaataaaacgtatcttttggtccctcacttttttctccgtttgccaaataaatcccgaactgttaactt 349  Q
    |||||||||||||| ||||||||| || || |||||||||   | ||||||| || ||  ||| ||||| |  |||||||||||||  ||||||||||||    
T  32598 taatttcaagtttttattttggtcacataactaataaaactcgtgttttggtgcc-catgtttgtctccatcggccaaataaatcct-aactgttaactt 32695  T
Q  350 taactccaaatgtctatggtagaccaaccttaaaagtggtccatcgtagaccttattaatttt 412  Q
    ||||   ||||||||||||| |||||||||||  ||||||||||| |||| | ||||| ||||    
T  32696 taaccttaaatgtctatggtggaccaaccttaggagtggtccatcatagatcctattattttt 32758  T

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Target: scaffold0219 (Bit Score: 34; Significance: 0.0000000009; HSPs: 1)
Name: scaffold0219
Description:

Target: scaffold0219; HSP #1
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 295 - 420
Target Start/End: Complemental strand, 8235 - 8111
Alignment:
Q  295 ttttggtccctcacttttttctccgtttgccaaataaatcccgaactgttaactttaactccaaatgtctatggtagaccaaccttaaaagtggtccatc 394  Q
    |||||||||||| | |||| ||||||| | ||| |  ||||| ||| ||||| |||||| ||||||||||||||| || ||||||||| || ||||||||    
T  8235 ttttggtccctctcgttttactccgttagtcaatttgatccctaaccgttaattttaaccccaaatgtctatggtggatcaaccttaagag-ggtccatc 8137  T
Q  395 gtagaccttattaattttattaattt 420  Q
     ||||   |||||||| | |||||||    
T  8136 atagattatattaattattttaattt 8111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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