View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5917_low_8 (Length: 251)
Name: NF5917_low_8
Description: NF5917
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5917_low_8 |
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Alignment Details
Target: chr8 (Bit Score: 226; Significance: 1e-125; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 226; E-Value: 1e-125
Query Start/End: Original strand, 1 - 234
Target Start/End: Original strand, 33739629 - 33739862
Alignment:
| Q |
1 |
taaaaatgaaattaaaatgagttcatttgagaccatttactggtgttgaaatagcaagtccaggccaagagaaacaatcaccagcaccaacaaaaccacc |
100 |
Q |
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|||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
33739629 |
taaaaatgaaataaaaatgagttcatttgagaccatttactggtgttgaaatagcaagtccaggccaagagaaacaatcaccagcaccaacaaaaccacc |
33739728 |
T |
|
| Q |
101 |
ttcaccaccttctaactgccacgtgtttccaacaacaccagaagacacgacaggaacaccatccatcattcctggaaaagcccaacctgttcttccaatc |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
33739729 |
ttcaccaccttctaactgccacgtgtttccaacaacaccagaagacacaacaggaacaccatccatcattcctggaaaagcccaacctgttcttccaatc |
33739828 |
T |
|
| Q |
201 |
ccaaatcccatttcttcaagcccaagcccaaatc |
234 |
Q |
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|||||||||||||||||||||||||||||||||| |
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| T |
33739829 |
ccaaatcccatttcttcaagcccaagcccaaatc |
33739862 |
T |
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