View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5918_high_54 (Length: 251)
Name: NF5918_high_54
Description: NF5918
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5918_high_54 |
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Alignment Details
Target: chr8 (Bit Score: 219; Significance: 1e-120; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 219; E-Value: 1e-120
Query Start/End: Original strand, 1 - 235
Target Start/End: Complemental strand, 8894093 - 8893859
Alignment:
| Q |
1 |
agtcacaagtgctgctatctatggcctcaatgcaacttcaccaccagacatgtcaatctcaatgcaattcacaatcttcataaggaatccaaacaagcga |
100 |
Q |
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||||||||||||||| |||||| |||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
8894093 |
agtcacaagtgctgcaatctatagcctcaatgctacttcaccgccagacatgtcaatctcaatgcaattcacaatcttcataaggaatccaaacaagcga |
8893994 |
T |
|
| Q |
101 |
gtatccatttactttgacaggctttccacctttgtgtcatatagaaaccatccgattacacctcatcatatgcttccgtcgctttacttggagaagcatg |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
8893993 |
gtatccatttactttgacaggctttccacctttgtgtcatatagaaaccatccgattacacctcatcatatgcttccgtcgctttacttggagaagcatg |
8893894 |
T |
|
| Q |
201 |
aaaccgtgtcggtatcaccagttttaggaggcgtg |
235 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| |
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| T |
8893893 |
aaaccgtgtcggtatcaccagttttaggaggcgtg |
8893859 |
T |
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