View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5918_low_26 (Length: 429)
Name: NF5918_low_26
Description: NF5918
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5918_low_26 |
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Alignment Details
Target: chr7 (Bit Score: 399; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 399; E-Value: 0
Query Start/End: Original strand, 14 - 412
Target Start/End: Original strand, 37813683 - 37814081
Alignment:
| Q |
14 |
aatatataccgaagtgccaatgaaaattgagttgccaactcctccaatgctttgtgcaaaaattgctgccaagcatcccaatccacctcctacaatggta |
113 |
Q |
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| T |
37813683 |
aatatataccgaagtgccaatgaaaattgagttgccaactcctccaatgctttgtgcaaaaattgctgccaagcatcccaatccacctcctacaatggta |
37813782 |
T |
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| Q |
114 |
cctattccacgattcaagccttttcctagtgtagctcctaacatgttgatcaaagtgattaattaacacattcatcattgcctaagaggcattgctatat |
213 |
Q |
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| T |
37813783 |
cctattccacgattcaagccttttcctagtgtagctcctaacatgttgatcaaagtgattaattaacacattcatcattgcctaagaggcattgctatat |
37813882 |
T |
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| Q |
214 |
ataagaattgataactgaaatatatatgctagctaatgaaagtatatacctgcattgaattcagagatgacaacaacagtcatgatagcccacattgcat |
313 |
Q |
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| T |
37813883 |
ataagaattgataactgaaatatatatgctagctaatgaaagtatatacctgcattgaattcagagatgacaacaacagtcatgatagcccacattgcat |
37813982 |
T |
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| Q |
314 |
tttcaccaacttgatcaaagagaggattcaaaatgtaaagaagtgataccaaaacaagtgagattcctactttgatgctatgaaccatcttcttaatat |
412 |
Q |
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| T |
37813983 |
tttcaccaacttgatcaaagagaggattcaaaatgtaaagaagtgataccaaaacaagtgagattcctactttgatgctatgaaccatcttcttaatat |
37814081 |
T |
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