View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5918_low_47 (Length: 269)
Name: NF5918_low_47
Description: NF5918
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5918_low_47 |
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Alignment Details
Target: chr3 (Bit Score: 182; Significance: 2e-98; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 182; E-Value: 2e-98
Query Start/End: Original strand, 10 - 203
Target Start/End: Original strand, 13829319 - 13829512
Alignment:
| Q |
10 |
attatacttgtaatcagttatcacaaaatcaaatctttcttatttaaaatccaaatttcaataatggcataaaaataatacacgcttaaatatatacttt |
109 |
Q |
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| T |
13829319 |
attacacttgtaatcagtaatcacaaaatcaaaactttcttatttaaaatccaaatttcaataatggcataaaaataatacacgcttaaatatatacttt |
13829418 |
T |
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| Q |
110 |
cttctaatactacaatttacgtgctaggatgcgaaatctacgtaagtctcttttggaaattaggcaaaatatacgtaagaatatattcagctgc |
203 |
Q |
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| T |
13829419 |
cttctaatactacaatttacgtgctaggatgcgaaatctacgtaagtctcttttggaaattaggcaaaatatacgtaagaatatattcagctgc |
13829512 |
T |
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