View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF5919_low_6 (Length: 350)
Name: NF5919_low_6
Description: NF5919
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5919_low_6 |
 |  |
|
| [»] scaffold0500 (1 HSPs) |
 |  |  |
|
| [»] scaffold0586 (1 HSPs) |
 |  |  |
|
Alignment Details
Target: chr6 (Bit Score: 261; Significance: 1e-145; HSPs: 3)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 261; E-Value: 1e-145
Query Start/End: Original strand, 7 - 340
Target Start/End: Complemental strand, 21481242 - 21480917
Alignment:
| Q |
7 |
gaacgtgggtaaaagactttcctgggaaaaatgtattccttggcatatttgtgttattcccatctaccaaacaaagcaatattcaattccagccttagat |
106 |
Q |
| |
|
|||| ||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| || |
|
|
| T |
21481242 |
gaacatgggtaaaagactttcctgagaaaaatgtattccttggtatatttgtgttattcccatctaccaaacaaagcaatattcaattccagccttaaat |
21481143 |
T |
 |
| Q |
107 |
tcctaggaattatttttgtaaccctcaaacaaacaccccctaagatttttatgggtttttctaacatgtgcaatgttgcacaatttaagccttaattatg |
206 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||| |
|
|
| T |
21481142 |
tcctaggaattatttttgtaaccctcaaacaaacacccc--------tttatgggtttttctaacatgtacaatgttgcacaatttaagccttaattatg |
21481051 |
T |
 |
| Q |
207 |
caacnnnnnnnnctcctctctaacgtgtgtgactgagagtgtgcgatagaattcagagagattgacccacccataccacaacacttcaccatcttcatat |
306 |
Q |
| |
|
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
21481050 |
caacttttttttctcctctctaacgtgtgtgactgagagtgtgcgatagaattcagagagattgacccacccataccacaacacttcaccatcttcatat |
21480951 |
T |
 |
| Q |
307 |
ctaaacaaaagtccaccatcacaacctatattct |
340 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| |
|
|
| T |
21480950 |
ctaaacaaaagtccaccatcacaacctatattct |
21480917 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 8 - 147
Target Start/End: Complemental strand, 19700990 - 19700851
Alignment:
| Q |
8 |
aacgtgggtaaaagactttcctgggaaaaatgtattccttggcatatttgtgttattcccatctaccaaacaaagcaatattcaattccagccttagatt |
107 |
Q |
| |
|
|||||||||| | | |||||||||||||| ||||||||| | ||||||||||| |||||| |||||||||||| ||| || ||||||||||||||||| |
|
|
| T |
19700990 |
aacgtgggtagatggctttcctgggaaaattgtattcctggacatatttgtgtggttcccacttaccaaacaaaggaatgtttaattccagccttagatt |
19700891 |
T |
 |
| Q |
108 |
cctaggaattatttttgtaaccctcaaacaaacaccccct |
147 |
Q |
| |
|
||| |||||||||||| | ||||||||||||||||||||| |
|
|
| T |
19700890 |
ccttggaattatttttattaccctcaaacaaacaccccct |
19700851 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 49 - 147
Target Start/End: Original strand, 766903 - 767001
Alignment:
| Q |
49 |
gcatatttgtgttattcccatctaccaaacaaagcaatattcaattccagccttagattcctaggaattatttttgtaaccctcaaacaaacaccccct |
147 |
Q |
| |
|
|||||||| | ||| || ||||||||||||| || |||| | |||| || |||||||||| ||| || |||| ||||||| ||||||||||| |||||| |
|
|
| T |
766903 |
gcatatttttcttactctcatctaccaaacagaggaatacttaatttcatccttagattcatagaaactattattgtaactctcaaacaaacgccccct |
767001 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 138; Significance: 4e-72; HSPs: 5)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 138; E-Value: 4e-72
Query Start/End: Original strand, 6 - 147
Target Start/End: Complemental strand, 26661325 - 26661184
Alignment:
| Q |
6 |
agaacgtgggtaaaagactttcctgggaaaaatgtattccttggcatatttgtgttattcccatctaccaaacaaagcaatattcaattccagccttaga |
105 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
26661325 |
agaacgtgggtaaaagactttcctgggaaaaatgtattccttggcatatttgtgttattcccatctaccaaacaaagcaatattcaattccagccttaga |
26661226 |
T |
 |
| Q |
106 |
ttcctaggaattatttttgtaaccctcaaacaaacaccccct |
147 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| ||||| |
|
|
| T |
26661225 |
ttcctaggaattatttttgtaaccctcaaacaaacatcccct |
26661184 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 23 - 116
Target Start/End: Complemental strand, 6049709 - 6049616
Alignment:
| Q |
23 |
ctttcctgggaaaaatgtattccttggcatatttgtgttattcccatctaccaaacaaagcaatattcaattccagccttagattcctaggaat |
116 |
Q |
| |
|
|||||||||||||||||||||||| ||||||||| |||| ||||||||||||||||| |||||| || |||||||||||||||||||||||||| |
|
|
| T |
6049709 |
ctttcctgggaaaaatgtattcctaggcatatttttgtttttcccatctaccaaacatagcaatctttaattccagccttagattcctaggaat |
6049616 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 108 - 149
Target Start/End: Original strand, 26667111 - 26667152
Alignment:
| Q |
108 |
cctaggaattatttttgtaaccctcaaacaaacaccccctaa |
149 |
Q |
| |
|
||||||||| | ||||||||||||||||||||| |||||||| |
|
|
| T |
26667111 |
cctaggaataaattttgtaaccctcaaacaaacgccccctaa |
26667152 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 151 - 188
Target Start/End: Original strand, 35729106 - 35729143
Alignment:
| Q |
151 |
atttttatgggtttttctaacatgtgcaatgttgcaca |
188 |
Q |
| |
|
|||||||||||||| ||||||||||||||| ||||||| |
|
|
| T |
35729106 |
atttttatgggtttgtctaacatgtgcaatattgcaca |
35729143 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #5
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 105 - 149
Target Start/End: Original strand, 6051977 - 6052021
Alignment:
| Q |
105 |
attcctaggaattatttttgtaaccctcaaacaaacaccccctaa |
149 |
Q |
| |
|
|||||| ||||| | ||||| |||||||||||||||||||||||| |
|
|
| T |
6051977 |
attccttggaataagttttgaaaccctcaaacaaacaccccctaa |
6052021 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0500 (Bit Score: 87; Significance: 1e-41; HSPs: 1)
Name: scaffold0500
Description:
Target: scaffold0500; HSP #1
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 66 - 152
Target Start/End: Original strand, 358 - 444
Alignment:
| Q |
66 |
ccatctaccaaacaaagcaatattcaattccagccttagattcctaggaattatttttgtaaccctcaaacaaacaccccctaagat |
152 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
358 |
ccatctaccaaacaaagcaatattcaattccagccttagattcctaggaattatttttgtaaccctcaaacaaacaccccctaagat |
444 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 74; Significance: 7e-34; HSPs: 3)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 23 - 116
Target Start/End: Original strand, 13894007 - 13894100
Alignment:
| Q |
23 |
ctttcctgggaaaaatgtattccttggcatatttgtgttattcccatctaccaaacaaagcaatattcaattccagccttagattcctaggaat |
116 |
Q |
| |
|
|||||||||||||||||||||||| ||||||||| |||| |||||||||||||||||||||||| || |||||||||||||||||||||||||| |
|
|
| T |
13894007 |
ctttcctgggaaaaatgtattcctaggcatatttttgtttttcccatctaccaaacaaagcaatctttaattccagccttagattcctaggaat |
13894100 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 95 - 147
Target Start/End: Complemental strand, 20856443 - 20856391
Alignment:
| Q |
95 |
ccagccttagattcctaggaattatttttgtaaccctcaaacaaacaccccct |
147 |
Q |
| |
|
||||||||||||||||||||| ||||||| |||||||||| |||||||||||| |
|
|
| T |
20856443 |
ccagccttagattcctaggaactatttttctaaccctcaatcaaacaccccct |
20856391 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 152 - 188
Target Start/End: Original strand, 40049550 - 40049586
Alignment:
| Q |
152 |
tttttatgggtttttctaacatgtgcaatgttgcaca |
188 |
Q |
| |
|
||||||||||||| ||||||||||||||| ||||||| |
|
|
| T |
40049550 |
tttttatgggtttgtctaacatgtgcaatattgcaca |
40049586 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 74; Significance: 7e-34; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 6 - 151
Target Start/End: Original strand, 15762290 - 15762435
Alignment:
| Q |
6 |
agaacgtgggtaaaagactttcctgggaaaaatgtattccttggcatatttgtgttattcccatctaccaaacaaagcaatattcaattccagccttaga |
105 |
Q |
| |
|
||||||||||| | ||||||||||||||||||||||||| ||||||||||||| | |||| ||||||||||||| ||||||| |||||||||||||| |
|
|
| T |
15762290 |
agaacgtgggtgtattactttcctgggaaaaatgtattcctaggcatatttgtgtggtacccacctaccaaacaaaggaatattcgattccagccttaga |
15762389 |
T |
 |
| Q |
106 |
ttcctaggaattatttttgtaaccctcaaacaaacaccccctaaga |
151 |
Q |
| |
|
||||| ||||| || || |||||||| ||||||||| |||||||| |
|
|
| T |
15762390 |
ttcctgagaatttttgttttaaccctctaacaaacacaccctaaga |
15762435 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 70; Significance: 2e-31; HSPs: 3)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 23 - 116
Target Start/End: Complemental strand, 44305926 - 44305833
Alignment:
| Q |
23 |
ctttcctgggaaaaatgtattccttggcatatttgtgttattcccatctaccaaacaaagcaatattcaattccagccttagattcctaggaat |
116 |
Q |
| |
|
|||||||||||||||||||||| | ||||||||| |||| |||||||||||||||||||||||| || |||||||||||||||||||||||||| |
|
|
| T |
44305926 |
ctttcctgggaaaaatgtattcttaggcatatttttgtttttcccatctaccaaacaaagcaatctttaattccagccttagattcctaggaat |
44305833 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 41 - 149
Target Start/End: Complemental strand, 22893574 - 22893466
Alignment:
| Q |
41 |
attccttggcatatttgtgttattcccatctaccaaacaaagcaatattcaattccagccttagattcctaggaattatttttgtaaccctcaaacaaac |
140 |
Q |
| |
|
|||||||| ||||||||||| |||||| |||||||||||| ||| || ||||||| |||||||||||| |||||||||||| || ||||||||||| |
|
|
| T |
22893574 |
attccttgacatatttgtgtggttcccacttaccaaacaaaggaatgtttaattccaaccttagattccttggaattatttttactactctcaaacaaac |
22893475 |
T |
 |
| Q |
141 |
accccctaa |
149 |
Q |
| |
|
||||||||| |
|
|
| T |
22893474 |
accccctaa |
22893466 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 7 - 142
Target Start/End: Complemental strand, 29845432 - 29845297
Alignment:
| Q |
7 |
gaacgtgggtaaaagactttcctgggaaaaatgtattccttggcatatttgtgttattcccatctaccaaacaaagcaatattcaattccagccttagat |
106 |
Q |
| |
|
|||||||||| || |||||||||| | ||||| ||||||| |||||||| ||| |||| ||||||||||||||| |||||| |||| || ||||| | |
|
|
| T |
29845432 |
gaacgtgggtgaatgactttcctgagtaaaatttattcctaagcatattttggttgttccaatctaccaaacaaaggaatatttaatttcaaccttactt |
29845333 |
T |
 |
| Q |
107 |
tcctaggaattatttttgtaaccctcaaacaaacac |
142 |
Q |
| |
|
|||| |||||||||||||||||| |||||||||| |
|
|
| T |
29845332 |
tccttaaaattatttttgtaacccttaaacaaacac |
29845297 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0586 (Bit Score: 66; Significance: 4e-29; HSPs: 1)
Name: scaffold0586
Description:
Target: scaffold0586; HSP #1
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 8 - 149
Target Start/End: Complemental strand, 9421 - 9280
Alignment:
| Q |
8 |
aacgtgggtaaaagactttcctgggaaaaatgtattccttggcatatttgtgttattcccatctaccaaacaaagcaatattcaattccagccttagatt |
107 |
Q |
| |
|
|||||||||| | | |||||||||||||| || |||||| | ||||||||||| |||||| ||||||||||||| ||| || ||||||| ||||||||| |
|
|
| T |
9421 |
aacgtgggtagatggctttcctgggaaaattgcattcctggacatatttgtgtggttcccacctaccaaacaaaggaatgtttaattccaaccttagatt |
9322 |
T |
 |
| Q |
108 |
cctaggaattatttttgtaaccctcaaacaaacaccccctaa |
149 |
Q |
| |
|
||| | |||||||||| ||||||||||||||||||||||| |
|
|
| T |
9321 |
ccttgaaattatttttactaccctcaaacaaacaccccctaa |
9280 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 63; Significance: 2e-27; HSPs: 3)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 8 - 146
Target Start/End: Complemental strand, 10637451 - 10637313
Alignment:
| Q |
8 |
aacgtgggtaaaagactttcctgggaaaaatgtattccttggcatatttgtgttattcccatctaccaaacaaagcaatattcaattccagccttagatt |
107 |
Q |
| |
|
|||||||||| | | |||||||||||||| || |||||| | ||||||||||| |||||| |||||||||||| ||| || ||||||| ||||||||| |
|
|
| T |
10637451 |
aacgtgggtagatggctttcctgggaaaattgcattcctggacatatttgtgtggttcccacttaccaaacaaaggaatgtttaattccaaccttagatt |
10637352 |
T |
 |
| Q |
108 |
cctaggaattatttttgtaaccctcaaacaaacaccccc |
146 |
Q |
| |
|
||| |||||||||||| |||||||||||||||||||| |
|
|
| T |
10637351 |
ccttggaattatttttactaccctcaaacaaacaccccc |
10637313 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 8 - 146
Target Start/End: Original strand, 32718143 - 32718281
Alignment:
| Q |
8 |
aacgtgggtaaaagactttcctgggaaaaatgtattccttggcatatttgtgttattcccatctaccaaacaaagcaatattcaattccagccttagatt |
107 |
Q |
| |
|
|||||||||| | | |||||||||||||| || |||||| | ||||||||||| |||||| |||||||||||| ||| || ||||||| ||||||||| |
|
|
| T |
32718143 |
aacgtgggtagatggctttcctgggaaaattgcattcctagacatatttgtgtggttcccacttaccaaacaaaggaatgtttaattccaaccttagatt |
32718242 |
T |
 |
| Q |
108 |
cctaggaattatttttgtaaccctcaaacaaacaccccc |
146 |
Q |
| |
|
||| |||||||||||| |||||||||||||||||||| |
|
|
| T |
32718243 |
ccttggaattatttttactaccctcaaacaaacaccccc |
32718281 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 153 - 194
Target Start/End: Original strand, 11923007 - 11923048
Alignment:
| Q |
153 |
ttttatgggtttttctaacatgtgcaatgttgcacaatttaa |
194 |
Q |
| |
|
|||||||||||| ||||||||||||||| |||||||| |||| |
|
|
| T |
11923007 |
ttttatgggtttgtctaacatgtgcaatattgcacaagttaa |
11923048 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 63; Significance: 2e-27; HSPs: 5)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 22 - 116
Target Start/End: Original strand, 13331863 - 13331957
Alignment:
| Q |
22 |
actttcctgggaaaaatgtattccttggcatatttgtgttattcccatctaccaaacaaagcaatattcaattccagccttagattcctaggaat |
116 |
Q |
| |
|
||||||||| |||||||||||||| ||||| ||||||| ||||||||||||||| |||| ||||||||||||||||||||||||||||||||| |
|
|
| T |
13331863 |
actttcctgaaaaaaatgtattcctgggcatttttgtgtggttcccatctaccaaataaagaaatattcaattccagccttagattcctaggaat |
13331957 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 22 - 116
Target Start/End: Original strand, 13342778 - 13342872
Alignment:
| Q |
22 |
actttcctgggaaaaatgtattccttggcatatttgtgttattcccatctaccaaacaaagcaatattcaattccagccttagattcctaggaat |
116 |
Q |
| |
|
||||||||| |||||||||||||| |||| ||||||| ||||||||||||||| |||| ||||||||||||||||||||||||||||||||| |
|
|
| T |
13342778 |
actttcctgaaaaaaatgtattcctgagcatttttgtgtggttcccatctaccaaataaagaaatattcaattccagccttagattcctaggaat |
13342872 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 105 - 148
Target Start/End: Complemental strand, 13323858 - 13323815
Alignment:
| Q |
105 |
attcctaggaattatttttgtaaccctcaaacaaacacccccta |
148 |
Q |
| |
|
|||||| ||||| | ||||||||||||||||||||||||||||| |
|
|
| T |
13323858 |
attcctgggaataaattttgtaaccctcaaacaaacacccccta |
13323815 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 161 - 204
Target Start/End: Original strand, 22707193 - 22707236
Alignment:
| Q |
161 |
gtttttctaacatgtgcaatgttgcacaatttaagccttaatta |
204 |
Q |
| |
|
||||||||||| |||||||||||||||| |||||||||||||| |
|
|
| T |
22707193 |
gtttttctaacctgtgcaatgttgcacagcttaagccttaatta |
22707236 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 159 - 188
Target Start/End: Complemental strand, 22689801 - 22689772
Alignment:
| Q |
159 |
gggtttttctaacatgtgcaatgttgcaca |
188 |
Q |
| |
|
|||||||||||||||||||||||||||||| |
|
|
| T |
22689801 |
gggtttttctaacatgtgcaatgttgcaca |
22689772 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 63; Significance: 2e-27; HSPs: 3)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 6 - 116
Target Start/End: Original strand, 5672318 - 5672428
Alignment:
| Q |
6 |
agaacgtgggtaaaagactttcctgggaaaaatgtattccttggcatatttgtgttattcccatctaccaaacaaagcaatattcaattccagccttaga |
105 |
Q |
| |
|
||||||||||| | |||||||||| |||||||||||||| |||| ||||||| ||||||||||||||| |||| |||||||||||||||||||||| |
|
|
| T |
5672318 |
agaacgtgggtttactactttcctggaaaaaatgtattcctgagcatttttgtgtggttcccatctaccaaataaagaaatattcaattccagccttaga |
5672417 |
T |
 |
| Q |
106 |
ttcctaggaat |
116 |
Q |
| |
|
||||||||||| |
|
|
| T |
5672418 |
ttcctaggaat |
5672428 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 120 - 149
Target Start/End: Complemental strand, 21635688 - 21635659
Alignment:
| Q |
120 |
ttttgtaaccctcaaacaaacaccccctaa |
149 |
Q |
| |
|
|||||||||||||||||||||||||||||| |
|
|
| T |
21635688 |
ttttgtaaccctcaaacaaacaccccctaa |
21635659 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 120 - 149
Target Start/End: Complemental strand, 21643935 - 21643906
Alignment:
| Q |
120 |
ttttgtaaccctcaaacaaacaccccctaa |
149 |
Q |
| |
|
|||||||||||||||||||||||||||||| |
|
|
| T |
21643935 |
ttttgtaaccctcaaacaaacaccccctaa |
21643906 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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