View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF5920_high_4 (Length: 459)

Name: NF5920_high_4
Description: NF5920
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF5920_high_4
NF5920_high_4
[»] chr6 (71 HSPs)
chr6 (17-297)||(26656073-26656353)
chr6 (17-297)||(26762044-26762324)
chr6 (17-291)||(27337894-27338168)
chr6 (17-291)||(27398634-27398908)
chr6 (17-292)||(25579803-25580081)
chr6 (17-297)||(26056010-26056293)
chr6 (17-297)||(26075980-26076263)
chr6 (17-297)||(26142949-26143232)
chr6 (17-297)||(25538624-25538907)
chr6 (17-297)||(26646563-26646843)
chr6 (17-297)||(26752531-26752811)
chr6 (17-172)||(26048929-26049084)
chr6 (17-172)||(26070098-26070253)
chr6 (17-297)||(25481826-25482109)
chr6 (17-278)||(26823924-26824185)
chr6 (17-189)||(26623060-26623232)
chr6 (17-189)||(26729038-26729210)
chr6 (17-294)||(26884247-26884526)
chr6 (17-262)||(27718237-27718482)
chr6 (17-135)||(28139625-28139743)
chr6 (31-269)||(28786376-28786614)
chr6 (31-269)||(28792497-28792735)
chr6 (17-121)||(27679030-27679134)
chr6 (31-269)||(28781237-28781475)
chr6 (17-123)||(27593017-27593123)
chr6 (17-262)||(27610860-27611105)
chr6 (17-121)||(27677613-27677717)
chr6 (17-294)||(27531023-27531300)
chr6 (17-233)||(27427493-27427709)
chr6 (17-114)||(27698500-27698597)
chr6 (17-82)||(27706440-27706505)
chr6 (31-262)||(26802540-26802771)
chr6 (16-263)||(26949744-26949991)
chr6 (25-137)||(27724828-27724940)
chr6 (17-283)||(26861700-26861963)
chr6 (24-269)||(27214508-27214756)
chr6 (24-269)||(27234472-27234720)
chr6 (23-107)||(28150027-28150111)
chr6 (16-123)||(27604702-27604809)
chr6 (24-152)||(26937185-26937313)
chr6 (24-202)||(26848751-26848929)
chr6 (17-68)||(28181198-28181249)
chr6 (17-263)||(28185450-28185696)
chr6 (172-231)||(28234802-28234861)
chr6 (17-68)||(28242888-28242939)
chr6 (17-68)||(28297765-28297816)
chr6 (17-68)||(28514257-28514308)
chr6 (17-63)||(26975136-26975182)
chr6 (17-62)||(2184372-2184417)
chr6 (17-65)||(25071743-25071791)
chr6 (17-68)||(26341986-26342037)
chr6 (17-198)||(28098291-28098472)
chr6 (17-68)||(28227034-28227085)
chr6 (17-123)||(31284372-31284478)
chr6 (17-62)||(2184982-2185027)
chr6 (17-61)||(28234648-28234692)
chr6 (178-231)||(26617867-26617920)
chr6 (178-231)||(26723795-26723848)
chr6 (162-263)||(26959395-26959496)
chr6 (174-263)||(28297570-28297659)
chr6 (174-263)||(28514414-28514503)
chr6 (16-68)||(26635773-26635825)
chr6 (16-68)||(26741739-26741791)
chr6 (24-68)||(27665169-27665213)
chr6 (16-63)||(26959249-26959296)
chr6 (17-68)||(28325565-28325616)
chr6 (89-147)||(29826183-29826241)
chr6 (143-256)||(25506848-25506961)
chr6 (162-263)||(26635919-26636020)
chr6 (162-263)||(26741885-26741986)
chr6 (178-231)||(26811754-26811807)
[»] chr4 (8 HSPs)
chr4 (17-269)||(18655315-18655567)
chr4 (17-297)||(18731314-18731594)
chr4 (17-297)||(18699210-18699490)
chr4 (17-297)||(18723895-18724175)
chr4 (17-297)||(18679377-18679657)
chr4 (17-233)||(18073846-18074062)
chr4 (17-153)||(5090921-5091057)
chr4 (17-69)||(17989091-17989143)
[»] chr8 (1 HSPs)
chr8 (17-277)||(29273613-29273873)
[»] chr1 (3 HSPs)
chr1 (17-269)||(268195-268447)
chr1 (17-297)||(28127489-28127769)
chr1 (17-297)||(28164173-28164452)
[»] scaffold0277 (2 HSPs)
scaffold0277 (25-277)||(4514-4766)
scaffold0277 (31-277)||(13475-13721)
[»] scaffold0349 (2 HSPs)
scaffold0349 (17-121)||(3420-3524)
scaffold0349 (25-262)||(14214-14451)
[»] scaffold0003 (1 HSPs)
scaffold0003 (17-233)||(59654-59870)
[»] scaffold0419 (1 HSPs)
scaffold0419 (31-277)||(7623-7869)
[»] scaffold0038 (4 HSPs)
scaffold0038 (17-231)||(34809-35023)
scaffold0038 (17-68)||(43050-43101)
scaffold0038 (17-68)||(27532-27583)
scaffold0038 (17-68)||(116880-116931)
[»] chr2 (2 HSPs)
chr2 (17-277)||(17993527-17993787)
chr2 (17-68)||(3279772-3279823)
[»] scaffold0019 (1 HSPs)
scaffold0019 (17-68)||(58334-58385)


Alignment Details
Target: chr6 (Bit Score: 273; Significance: 1e-152; HSPs: 71)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 273; E-Value: 1e-152
Query Start/End: Original strand, 17 - 297
Target Start/End: Original strand, 26656073 - 26656353
Alignment:
Q  17 tatgcatcttcttcattttgtttggacgaacttgtccacatcattcactgctataagacaaagggttgttcggttttgcctgttttctatggtgtggatc 116  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26656073 tatgcatcttcttcattttgtttggacgaacttgtccacatcattcattgctataagacaaagggttgttcggttttgcctgttttctatggtgtggatc 26656172  T
Q  117 ctactcacatacgacatcagactggaagttacggtgagcatcttactaagcatgaaaagaagttccaaaataacaaggaaaacatgcagaggttggagca 216  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26656173 ctactcacatacgacatcagactggaagttacggtgagcatcttactaagcatgaaaagaagttccaaaataacaaggaaaacatgcagaggttggagca 26656272  T
Q  217 atggaagatggctctgaccaaagctgccaacttgtctggctaccattgtagtcaagggtaccccactatacttaaatcttg 297  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  26656273 atggaagatggctctgaccaaagctgccaacttgtctggctaccattgtagtcaagggtaccccactttacttaaatcttg 26656353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 273; E-Value: 1e-152
Query Start/End: Original strand, 17 - 297
Target Start/End: Original strand, 26762044 - 26762324
Alignment:
Q  17 tatgcatcttcttcattttgtttggacgaacttgtccacatcattcactgctataagacaaagggttgttcggttttgcctgttttctatggtgtggatc 116  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26762044 tatgcatcttcttcattttgtttggacgaacttgtccacatcattcattgctataagacaaagggttgttcggttttgcctgttttctatggtgtggatc 26762143  T
Q  117 ctactcacatacgacatcagactggaagttacggtgagcatcttactaagcatgaaaagaagttccaaaataacaaggaaaacatgcagaggttggagca 216  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26762144 ctactcacatacgacatcagactggaagttacggtgagcatcttactaagcatgaaaagaagttccaaaataacaaggaaaacatgcagaggttggagca 26762243  T
Q  217 atggaagatggctctgaccaaagctgccaacttgtctggctaccattgtagtcaagggtaccccactatacttaaatcttg 297  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  26762244 atggaagatggctctgaccaaagctgccaacttgtctggctaccattgtagtcaagggtaccccactttacttaaatcttg 26762324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 17 - 291
Target Start/End: Complemental strand, 27338168 - 27337894
Alignment:
Q  17 tatgcatcttcttcattttgtttggacgaacttgtccacatcattcactgctataagacaaagggttgttcggttttgcctgttttctatggtgtggatc 116  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||| |||||    
T  27338168 tatgcatcttcttcattttgcttggacgaacttgtccacatcattcactgctacaagacaaggggttgttcggttttgcctgttttctatggtgcggatc 27338069  T
Q  117 ctactcacatacgacatcagactggaagttacggtgagcatcttactaagcatgaaaagaagttccaaaataacaaggaaaacatgcagaggttggagca 216  Q
    |||||||| |||||||||||||||| ||||| |||||||||||||||||||||||| | ||||||||||||||||||||||||||| |||||||| || |    
T  27338068 ctactcacgtacgacatcagactgggagttatggtgagcatcttactaagcatgaagataagttccaaaataacaaggaaaacatggagaggttgaagaa 27337969  T
Q  217 atggaagatggctctgaccaaagctgccaacttgtctggctaccattgtagtcaagggtaccccactatacttaa 291  Q
    ||||||||||||||| ||| ||||||| ||||| || ||| |||||| ||||||||||||||||||| |||||||    
T  27337968 atggaagatggctcttacccaagctgctaacttctccggccaccattttagtcaagggtaccccactttacttaa 27337894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 17 - 291
Target Start/End: Complemental strand, 27398908 - 27398634
Alignment:
Q  17 tatgcatcttcttcattttgtttggacgaacttgtccacatcattcactgctataagacaaagggttgttcggttttgcctgttttctatggtgtggatc 116  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||| |||||    
T  27398908 tatgcatcttcttcattttgcttggacgaacttgtccacatcattcactgctacaagacaaggggttgttcggttttgcctgttttctatggtgcggatc 27398809  T
Q  117 ctactcacatacgacatcagactggaagttacggtgagcatcttactaagcatgaaaagaagttccaaaataacaaggaaaacatgcagaggttggagca 216  Q
    |||||||| |||||||||||||||| ||||| |||||||||||||||||||||||| | ||||||||||||||||||||||||||| |||||||| || |    
T  27398808 ctactcacgtacgacatcagactgggagttatggtgagcatcttactaagcatgaagataagttccaaaataacaaggaaaacatggagaggttgaagaa 27398709  T
Q  217 atggaagatggctctgaccaaagctgccaacttgtctggctaccattgtagtcaagggtaccccactatacttaa 291  Q
    ||||||||||||||| ||| ||||||| ||||| || ||| |||||| ||||||||||||||||||| |||||||    
T  27398708 atggaagatggctcttacccaagctgctaacttctccggccaccattttagtcaagggtaccccactttacttaa 27398634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 133; E-Value: 6e-69
Query Start/End: Original strand, 17 - 292
Target Start/End: Original strand, 25579803 - 25580081
Alignment:
Q  17 tatgcatcttcttcattttgtttggacgaacttgtccacatcattcactgctataagacaaagggttgttcggttttgcctgttttctatggtgtggatc 116  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||| |  || ||||| |||||||||| |||||| |    
T  25579803 tatgcatcttcttcattttgtttggacgaacttgtccacatcattcactgctacaagacaaagagttgcttagtattgcccgttttctatgatgtggaac 25579902  T
Q  117 ctactcacatacgacatcagactggaagttacggtgagcatcttactaagcatgaaaagaagttccaaaataacaaggaaaacatgcagaggttggagca 216  Q
    ||||||||||||||||||||| ||| ||||| |||||| ||||||||||||||||| ||| ||| ||||||||| || |||||||| || | |||   ||    
T  25579903 ctactcacatacgacatcagagtgggagttatggtgagtatcttactaagcatgaagagaggtttcaaaataacgagaaaaacatggagcgattgcgtca 25580002  T
Q  217 atggaagatggctctgaccaaagctgccaacttgtctggctaccattgtag---tcaagggtaccccactatacttaaa 292  Q
    ||||||||| ||||| ||| ||||||| |||||||| ||||| |||| |||   ||| |||||||||||| ||||||||    
T  25580003 atggaagatagctcttacccaagctgctaacttgtccggctatcattatagtcctcatgggtaccccactttacttaaa 25580081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 126; E-Value: 8e-65
Query Start/End: Original strand, 17 - 297
Target Start/End: Original strand, 26056010 - 26056293
Alignment:
Q  17 tatgcatcttcttcattttgtttggacgaacttgtccacatcattcactgctataagacaaagggttgttcggttttgcctgttttctatggtgtggatc 116  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||| |||| |  || ||||| |||||||||| |||||| |    
T  26056010 tatgcatcttcttcattttgtttggacgaacttgtccacatcattcactgctacaacacaaagagttgcttagtattgcccgttttctatgatgtggaac 26056109  T
Q  117 ctactcacatacgacatcagactggaagttacggtgagcatcttactaagcatgaaaagaagttccaaaataacaaggaaaacatgcagaggttggagca 216  Q
    ||||||||||||||||||||| ||| ||||| ||||||||||||||||||||| || ||  ||||||||||||| || |||||||| || | |||   ||    
T  26056110 ctactcacatacgacatcagagtgggagttatggtgagcatcttactaagcataaagaggggttccaaaataacgagaaaaacatggagcgattgcgtca 26056209  T
Q  217 atggaagatggctctgaccaaagctgccaacttgtctggctaccattgtag---tcaagggtaccccactatacttaaatcttg 297  Q
    ||||||||||||||| ||  ||||||| |||||||| ||||| |||| |||   ||| | |||||| ||| |||||||||||||    
T  26056210 atggaagatggctcttactcaagctgctaacttgtccggctatcattatagtcctcatgagtaccctactttacttaaatcttg 26056293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 126; E-Value: 8e-65
Query Start/End: Original strand, 17 - 297
Target Start/End: Original strand, 26075980 - 26076263
Alignment:
Q  17 tatgcatcttcttcattttgtttggacgaacttgtccacatcattcactgctataagacaaagggttgttcggttttgcctgttttctatggtgtggatc 116  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||| |||| |  || ||||| |||||||||| |||||| |    
T  26075980 tatgcatcttcttcattttgtttggacgaacttgtccacatcattcactgctacaacacaaagagttgcttagtattgcccgttttctatgatgtggaac 26076079  T
Q  117 ctactcacatacgacatcagactggaagttacggtgagcatcttactaagcatgaaaagaagttccaaaataacaaggaaaacatgcagaggttggagca 216  Q
    ||||||||||||||||||||| ||| ||||| ||||||||||||||||||||| || ||  ||||||||||||| || |||||||| || | |||   ||    
T  26076080 ctactcacatacgacatcagagtgggagttatggtgagcatcttactaagcataaagaggggttccaaaataacgagaaaaacatggagcgattgcgtca 26076179  T
Q  217 atggaagatggctctgaccaaagctgccaacttgtctggctaccattgtag---tcaagggtaccccactatacttaaatcttg 297  Q
    ||||||||||||||| ||  ||||||| |||||||| ||||| |||| |||   ||| | |||||| ||| |||||||||||||    
T  26076180 atggaagatggctcttactcaagctgctaacttgtccggctatcattatagtcctcatgagtaccctactttacttaaatcttg 26076263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 17 - 297
Target Start/End: Original strand, 26142949 - 26143232
Alignment:
Q  17 tatgcatcttcttcattttgtttggacgaacttgtccacatcattcactgctataagacaaagggttgttcggttttgcctgttttctatggtgtggatc 116  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||| |  || || || |||||||||| |||||| |    
T  26142949 tatgcatcttcttcattttgtttggacgaacttgtccacatcattcactgctacaagacaaagagttgcttagtatttcccgttttctatgatgtggaac 26143048  T
Q  117 ctactcacatacgacatcagactggaagttacggtgagcatcttactaagcatgaaaagaagttccaaaataacaaggaaaacatgcagaggttggagca 216  Q
    |||||||||||||| |||||| ||| | ||| |||||||||||||||||||||||| ||| ||| ||||||||| || |||||||| || | |||   ||    
T  26143049 ctactcacatacgaaatcagagtgggatttatggtgagcatcttactaagcatgaagagaggtttcaaaataacgagaaaaacatggagcgattgcgtca 26143148  T
Q  217 atggaagatggctctgaccaaagctgccaacttgtctggctaccattgtag---tcaagggtaccccactatacttaaatcttg 297  Q
    ||||||||| ||||| | | ||||||| |||||||| ||||| |||| |||   ||| |||||||||||| |||||||| ||||    
T  26143149 atggaagatagctcttatccaagctgctaacttgtccggctatcattatagtcctcatgggtaccccactttacttaaaacttg 26143232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 118; E-Value: 5e-60
Query Start/End: Original strand, 17 - 297
Target Start/End: Original strand, 25538624 - 25538907
Alignment:
Q  17 tatgcatcttcttcattttgtttggacgaacttgtccacatcattcactgctataagacaaagggttgttcggttttgcctgttttctatggtgtggatc 116  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||| |||| |  || ||||| |||||||||| |||||| |    
T  25538624 tatgcatcttcttcattttgtttggacgaacttgtccagatcattcactgctacaagacaaagagttgcttagtattgcccgttttctatgatgtggaac 25538723  T
Q  117 ctactcacatacgacatcagactggaagttacggtgagcatcttactaagcatgaaaagaagttccaaaataacaaggaaaacatgcagaggttggagca 216  Q
    |||||||  |||||||||||| ||| ||||| ||||||||| |||||||||||||| ||| ||| ||||||||  || |||||||| || | |||   ||    
T  25538724 ctactcagttacgacatcagagtgggagttatggtgagcattttactaagcatgaagagaggtttcaaaataatgagaaaaacatggagcgattgcgtca 25538823  T
Q  217 atggaagatggctctgaccaaagctgccaacttgtctggctaccattgtag---tcaagggtaccccactatacttaaatcttg 297  Q
    ||||||||| ||||| | | ||||||| |||||||| ||||| |||| |||   ||| |||||||||||| |||||||||||||    
T  25538824 atggaagatagctcttatccaagctgctaacttgtccggctatcattatagtcctcatgggtaccccactttacttaaatcttg 25538907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 17 - 297
Target Start/End: Original strand, 26646563 - 26646843
Alignment:
Q  17 tatgcatcttcttcattttgtttggacgaacttgtccacatcattcactgctataagacaaagggttgttcggttttgcctgttttctatggtgtggatc 116  Q
    ||||| ||||||  ||||||||||||||||||||||||||||||||| ||||| |||||||||||| ||   |||||||| ||||||||||| |||||||    
T  26646563 tatgcctcttctaaattttgtttggacgaacttgtccacatcattcattgctacaagacaaagggtcgtctcgttttgcccgttttctatggcgtggatc 26646662  T
Q  117 ctactcacatacgacatcagactggaagttacggtgagcatcttactaagcatgaaaagaagttccaaaataacaaggaaaacatgcagaggttggagca 216  Q
    ||||||| ||||| ||||| | ||| ||||| ||||| ||||| |||||||| ||| |||  ||||||||||||||| |||||| | |  | ||| | ||    
T  26646663 ctactcagatacggcatcaaagtgggagttatggtgaacatctcactaagcacgaagagagtttccaaaataacaagaaaaacaaggaacgattgcatca 26646762  T
Q  217 atggaagatggctctgaccaaagctgccaacttgtctggctaccattgtagtcaagggtaccccactatacttaaatcttg 297  Q
    ||||||| ||||||||||| ||||||| |||||||| || ||||||| |||||  |||||||||||| |||||||| ||||    
T  26646763 atggaagttggctctgacccaagctgctaacttgtccggataccattatagtcctgggtaccccactttacttaaaccttg 26646843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 17 - 297
Target Start/End: Original strand, 26752531 - 26752811
Alignment:
Q  17 tatgcatcttcttcattttgtttggacgaacttgtccacatcattcactgctataagacaaagggttgttcggttttgcctgttttctatggtgtggatc 116  Q
    ||||| ||||||  ||||||||||||||||||||||||||||||||| ||||| |||||||||||| ||   |||||||| ||||||||||| |||||||    
T  26752531 tatgcctcttctaaattttgtttggacgaacttgtccacatcattcattgctacaagacaaagggtcgtctcgttttgcccgttttctatggcgtggatc 26752630  T
Q  117 ctactcacatacgacatcagactggaagttacggtgagcatcttactaagcatgaaaagaagttccaaaataacaaggaaaacatgcagaggttggagca 216  Q
    ||||||| ||||| ||||| | ||| ||||| ||||| ||||| |||||||| ||| |||  ||||||||||||||| |||||| | |  | ||| | ||    
T  26752631 ctactcagatacggcatcaaagtgggagttatggtgaacatctcactaagcacgaagagagtttccaaaataacaagaaaaacaaggaacgattgcatca 26752730  T
Q  217 atggaagatggctctgaccaaagctgccaacttgtctggctaccattgtagtcaagggtaccccactatacttaaatcttg 297  Q
    ||||||| ||||||||||| ||||||| |||||||| || ||||||| |||||  |||||||||||| |||||||| ||||    
T  26752731 atggaagttggctctgacccaagctgctaacttgtccggataccattatagtcctgggtaccccactttacttaaaccttg 26752811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 17 - 172
Target Start/End: Original strand, 26048929 - 26049084
Alignment:
Q  17 tatgcatcttcttcattttgtttggacgaacttgtccacatcattcactgctataagacaaagggttgttcggttttgcctgttttctatggtgtggatc 116  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||| |  || ||||| ||||| |||| |||||| |    
T  26048929 tatgcatcttcttcattttgtttggacgaacttgtccacatcattcactgctacaagacaaagagttgcttagtattgcccgttttttatgatgtggaac 26049028  T
Q  117 ctactcacatacgacatcagactggaagttacggtgagcatcttactaagcatgaa 172  Q
    ||||||||||||||||||| | ||||||||| ||||||||||||||||||||||||    
T  26049029 ctactcacatacgacatcatagtggaagttatggtgagcatcttactaagcatgaa 26049084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 17 - 172
Target Start/End: Original strand, 26070098 - 26070253
Alignment:
Q  17 tatgcatcttcttcattttgtttggacgaacttgtccacatcattcactgctataagacaaagggttgttcggttttgcctgttttctatggtgtggatc 116  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||| |  || ||||| ||||| |||| |||||| |    
T  26070098 tatgcatcttcttcattttgtttggacgaacttgtccacatcattcactgctacaagacaaagagttgcttagtattgcccgttttttatgatgtggaac 26070197  T
Q  117 ctactcacatacgacatcagactggaagttacggtgagcatcttactaagcatgaa 172  Q
    ||||||||||||||||||| | ||||||||| ||||||||||||||||||||||||    
T  26070198 ctactcacatacgacatcatagtggaagttatggtgagcatcttactaagcatgaa 26070253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 17 - 297
Target Start/End: Original strand, 25481826 - 25482109
Alignment:
Q  17 tatgcatcttcttcattttgtttggacgaacttgtccacatcattcactgctataagacaaagggttgttcggttttgcctgttttctatggtgtggatc 116  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||| |  || || || |||||||||||||||||||    
T  25481826 tatgcatcttcttcattttgtttggacgaacttgtccacatcattcactgctacaagacaaagagttgcttagtattacccgttttctatggtgtggatc 25481925  T
Q  117 ctactcacatacgacatcagactggaagttacggtgagcatcttactaagcatgaaaagaagttccaaaataacaaggaaaacatgcagaggttggagca 216  Q
    ||||| |  | |||| ||| ||  | ||||| |||||  |||| |||||||||||| ||  ||||||||||||| || |||||||| || | |||   ||    
T  25481926 ctactgatgttcgacgtcatacatgtagttatggtgaatatctgactaagcatgaagaggggttccaaaataacgagaaaaacatggagcgattgcgtca 25482025  T
Q  217 atggaagatggctctgaccaaagctgccaacttgtctggctaccattgtag---tcaagggtaccccactatacttaaatcttg 297  Q
    ||||||||||||||| ||  ||||||| || ||||| ||||| |||| |||   ||| | |||||||||| |||||||| ||||    
T  25482026 atggaagatggctcttactcaagctgctaatttgtccggctatcattatagtcctcatgagtaccccactttacttaaaacttg 25482109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 17 - 278
Target Start/End: Original strand, 26823924 - 26824185
Alignment:
Q  17 tatgcatcttcttcattttgtttggacgaacttgtccacatcattcactgctataagacaaagggttgttcggttttgcctgttttctatggtgtggatc 116  Q
    ||||| |||||||||||||||||||||||||||||||||||||||| |  ||| |||  ||||||  |    ||||||||||||||||||||||||||||    
T  26823924 tatgcctcttcttcattttgtttggacgaacttgtccacatcattcgcgtctacaaggaaaaggggcgcctcgttttgcctgttttctatggtgtggatc 26824023  T
Q  117 ctactcacatacgacatcagactggaagttacggtgagcatcttactaagcatgaaaagaagttccaaaataacaaggaaaacatgcagaggttggagca 216  Q
    ||  | ||||||||||||||  ||| ||||| | |   ||||| |||||||||||||||| ||||  ||||||||||||||||||| |||  |||   ||    
T  26824024 ctggtgacatacgacatcagcgtgggagttatgctatacatctcactaagcatgaaaagaggttcggaaataacaaggaaaacatggagaaattgcttca 26824123  T
Q  217 atggaagatggctctgaccaaagctgccaacttgtctggctaccattgtagtcaagggtacc 278  Q
    |||||||| ||||||||   |||||||  ||||||||||||  |||| |||||  |||||||    
T  26824124 atggaagaaggctctgaaacaagctgctgacttgtctggctttcattttagtcttgggtacc 26824185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 17 - 189
Target Start/End: Original strand, 26623060 - 26623232
Alignment:
Q  17 tatgcatcttcttcattttgtttggacgaacttgtccacatcattcactgctataagacaaagggttgttcggttttgcctgttttctatggtgtggatc 116  Q
    ||||||| |||||||||||||||||| |||||||||||||||||||||||||| || ||||||||| ||   |||||||| || |||||||| |||||||    
T  26623060 tatgcatattcttcattttgtttggatgaacttgtccacatcattcactgctacaaaacaaagggtcgtctcgttttgcccgtcttctatggcgtggatc 26623159  T
Q  117 ctactcacatacgacatcagactggaagttacggtg-agcatcttactaagcatgaaaagaagttccaaaataa 189  Q
    ||||||||||||| ||||| ||||| ||||| || | |||| ||| ||||||||| ||||| |||||| |||||    
T  26623160 ctactcacatacggcatcaaactgggagttatggcgaagca-cttgctaagcatgcaaagaggttccataataa 26623232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 17 - 189
Target Start/End: Original strand, 26729038 - 26729210
Alignment:
Q  17 tatgcatcttcttcattttgtttggacgaacttgtccacatcattcactgctataagacaaagggttgttcggttttgcctgttttctatggtgtggatc 116  Q
    ||||||| |||||||||||||||||| |||||||||||||||||||||||||| || ||||||||| ||   |||||||| || |||||||| |||||||    
T  26729038 tatgcatattcttcattttgtttggatgaacttgtccacatcattcactgctacaaaacaaagggtcgtctcgttttgcccgtcttctatggcgtggatc 26729137  T
Q  117 ctactcacatacgacatcagactggaagttacggtg-agcatcttactaagcatgaaaagaagttccaaaataa 189  Q
    ||||||||||||| ||||| ||||| ||||| || | |||| ||| ||||||||| ||||| |||||| |||||    
T  26729138 ctactcacatacggcatcaaactgggagttatggcgaagca-cttgctaagcatgcaaagaggttccataataa 26729210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 17 - 294
Target Start/End: Original strand, 26884247 - 26884526
Alignment:
Q  17 tatgcatcttcttcattttgtttggacgaacttgtccaca--tcattcactgctataagacaaagggttgttcggttttgcctgttttctatggtgtgga 114  Q
    ||||||||||||||||||||||||||||||||||||||||  |||||||||||||  ||||||||||| |    ||||||||||||||   |||||||||    
T  26884247 tatgcatcttcttcattttgtttggacgaacttgtccacatgtcattcactgctacgagacaaagggtcgcctcgttttgcctgtttttgttggtgtgga 26884346  T
Q  115 tcctactcacatacgacatcagactggaagttacggtg-agcatcttactaagcatgaaaagaagttccaaaataacaaggaaaacatgcagaggttgga 213  Q
    ||||||| |  | |||||||| || || ||||| |||| ||||| |  || | |||||||| | ||| |||||| | ||||| |||||| |||||||| |    
T  26884347 tcctactgatgtgcgacatcatacaggtagttatggtgaagcat-tggctgaccatgaaaaaaggtttcaaaatgataaggataacatggagaggttgca 26884445  T
Q  214 gcaatggaagatggctctgaccaaagctgccaacttgtctggctaccattgtagtcaagggtaccccactatacttaaatc 294  Q
    || |||||| |||||| |||   ||| ||| |||||||| |||||||||| |||||  ||||| |||||| ||||||||||    
T  26884446 gcgatggaaaatggctatgaggcaagttgctaacttgtccggctaccattttagtcttgggtatcccactttacttaaatc 26884526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 17 - 262
Target Start/End: Complemental strand, 27718482 - 27718237
Alignment:
Q  17 tatgcatcttcttcattttgtttggacgaacttgtccacatcattcactgctataagacaaagggttgttcggttttgcctgttttctatggtgtggatc 116  Q
    ||||| |||||||| |||||||||||||||||||||||||| ||||||||||| |||||||||||| |    ||||||||||||||||  || ||||| |    
T  27718482 tatgcctcttcttcgttttgtttggacgaacttgtccacataattcactgctacaagacaaagggtcgcctcgttttgcctgttttcttcggcgtggaac 27718383  T
Q  117 ctactcacatacgacatcagactggaagttacggtg-agcatcttactaagcatgaaaagaagttccaaaataacaaggaaaacatgcagaggttggagc 215  Q
    ||||| || | ||||||||||  || ||||| |||| ||||| |  || |||||||||||| ||| |||||| | ||| | |||||| |||||||| |||    
T  27718382 ctactaacgtgcgacatcagaaaggtagttatggtgaagcat-tggctgagcatgaaaagaggtttcaaaatgataagaataacatggagaggttgcagc 27718284  T
Q  216 aatggaagatggctctgaccaaagctgccaacttgtctggctaccat 262  Q
     ||||||  ||||||||| | | ||||| |||||||| |||||||||    
T  27718283 gatggaaagtggctctgagccaggctgctaacttgtccggctaccat 27718237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 17 - 135
Target Start/End: Original strand, 28139625 - 28139743
Alignment:
Q  17 tatgcatcttcttcattttgtttggacgaacttgtccacatcattcactgctataagacaaagggttgttcggttttgcctgttttctatggtgtggatc 116  Q
    ||||| |||||||| ||||| |||||||||||||||||||||||| ||||||  || |||||||| |||| |||||||||||||||||||||||||||||    
T  28139625 tatgcctcttcttcgttttgcttggacgaacttgtccacatcattgactgcttcaacacaaagggatgtttggttttgcctgttttctatggtgtggatc 28139724  T
Q  117 ctactcacatacgacatca 135  Q
    || ||||||| ||||||||    
T  28139725 cttctcacattcgacatca 28139743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 31 - 269
Target Start/End: Original strand, 28786376 - 28786614
Alignment:
Q  31 attttgtttggacgaacttgtccacatcattcactgctataagacaaagggttgttcggttttgcctgttttctatggtgtggatcctactcacatacga 130  Q
    |||||| |||||||||||||| ||||| ||||| ||||| |||||||| ||| |    |||||||||||||||| |||||| ||||||||| |  | |||    
T  28786376 attttgcttggacgaacttgttcacattattcattgctacaagacaaaaggtcgcctcgttttgcctgttttctttggtgtcgatcctactaatgtgcga 28786475  T
Q  131 catcagactggaagttacggtga-gcatcttactaagcatgaaaagaagttccaaaataacaaggaaaacatgcagaggttggagcaatggaagatggct 229  Q
    ||||| || ||  |||| ||||| |||| |  ||  ||||||||||| ||| |||||| | ||||| |||||| |||||||| | ||||||||| |||||    
T  28786476 catcatacaggtcgttatggtgaagcat-tggctgggcatgaaaagaggtttcaaaatgataaggataacatggagaggttgcatcaatggaagttggct 28786574  T
Q  230 ctgaccaaagctgccaacttgtctggctaccattgtagtc 269  Q
    |||||| ||||||| |||||||| |||||||||| |||||    
T  28786575 ctgacccaagctgctaacttgtccggctaccattctagtc 28786614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 31 - 269
Target Start/End: Original strand, 28792497 - 28792735
Alignment:
Q  31 attttgtttggacgaacttgtccacatcattcactgctataagacaaagggttgttcggttttgcctgttttctatggtgtggatcctactcacatacga 130  Q
    |||||| |||||||||||||| ||||| ||||| ||||| |||||||| ||| |    |||||||||||||||| |||||| ||||||||| |  | |||    
T  28792497 attttgcttggacgaacttgttcacattattcattgctacaagacaaaaggtcgcctcgttttgcctgttttctttggtgtcgatcctactaatgtgcga 28792596  T
Q  131 catcagactggaagttacggtga-gcatcttactaagcatgaaaagaagttccaaaataacaaggaaaacatgcagaggttggagcaatggaagatggct 229  Q
    ||||| || ||  |||| ||||| |||| |  ||  ||||||||||| ||| |||||| | ||||| |||||| |||||||| | ||||||||| |||||    
T  28792597 catcatacaggtcgttatggtgaagcat-tggctgggcatgaaaagaggtttcaaaatgataaggataacatggagaggttgcatcaatggaagttggct 28792695  T
Q  230 ctgaccaaagctgccaacttgtctggctaccattgtagtc 269  Q
    |||||| ||||||| |||||||| |||||||||| |||||    
T  28792696 ctgacccaagctgctaacttgtccggctaccattctagtc 28792735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 17 - 121
Target Start/End: Original strand, 27679030 - 27679134
Alignment:
Q  17 tatgcatcttcttcattttgtttggacgaacttgtccacatcattcactgctataagacaaagggttgttcggttttgcctgttttctatggtgtggatc 116  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |    ||| |||||||||||| ||||||||| |    
T  27679030 tatgcctcttcttcattttgtttggacgaacttgtccacatcattcactgctacaagacaaagggtcgcctcgttctgcctgttttctttggtgtggaac 27679129  T
Q  117 ctact 121  Q
    |||||    
T  27679130 ctact 27679134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 31 - 269
Target Start/End: Original strand, 28781237 - 28781475
Alignment:
Q  31 attttgtttggacgaacttgtccacatcattcactgctataagacaaagggttgttcggttttgcctgttttctatggtgtggatcctactcacatacga 130  Q
    |||||| |||||||||||||| ||||| ||||| ||||| |||||||| ||| |    |||||||||||||||| |||||||||||||||| |  | |||    
T  28781237 attttgcttggacgaacttgttcacattattcattgctacaagacaaaaggtcgcctcgttttgcctgttttctttggtgtggatcctactaatgtgcga 28781336  T
Q  131 catcagactggaagttacggtga-gcatcttactaagcatgaaaagaagttccaaaataacaaggaaaacatgcagaggttggagcaatggaagatggct 229  Q
    ||||| || ||   ||| ||||| |||| |  ||   |||||||||| ||| |||||| | ||||| |||||| |||||||| | ||||||||| |||||    
T  28781337 catcatacaggtccttatggtgaagcat-tggctggacatgaaaagaggtttcaaaatgataaggataacatggagaggttgcatcaatggaagttggct 28781435  T
Q  230 ctgaccaaagctgccaacttgtctggctaccattgtagtc 269  Q
    |||||| ||||||| |||||||| |||||||||| |||||    
T  28781436 ctgacccaagctgctaacttgtccggctaccattctagtc 28781475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 17 - 123
Target Start/End: Complemental strand, 27593123 - 27593017
Alignment:
Q  17 tatgcatcttcttcattttgtttggacgaacttgtccacatcattcactgctataagacaaagggttgttcggttttgcctgttttctatggtgtggatc 116  Q
    ||||| |||||||| ||||||||||||||||||| |||||||||||| ||||| |||||||||||| |  | |||||||||||||||| |||||||||||    
T  27593123 tatgcctcttcttcgttttgtttggacgaacttgaccacatcattcattgctacaagacaaagggtcgccctgttttgcctgttttctttggtgtggatc 27593024  T
Q  117 ctactca 123  Q
    || ||||    
T  27593023 cttctca 27593017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 17 - 262
Target Start/End: Complemental strand, 27611105 - 27610860
Alignment:
Q  17 tatgcatcttcttcattttgtttggacgaacttgtccacatcattcactgctataagacaaagggttgttcggttttgcctgttttctatggtgtggatc 116  Q
    ||||| |||||||| |||||||||||||||||||||||||| ||||||||||| |||||||||||| |    ||||||||||||||||  || ||||| |    
T  27611105 tatgcctcttcttcgttttgtttggacgaacttgtccacataattcactgctacaagacaaagggtcgcctcgttttgcctgttttcttcggcgtggaac 27611006  T
Q  117 ctactcacatacgacatcagactggaagttacggtg-agcatcttactaagcatgaaaagaagttccaaaataacaaggaaaacatgcagaggttggagc 215  Q
    ||||| |  | ||||||||||  || ||||| |||| ||||| |  || |||||||||||| ||| |||||| | ||| | |||||| |||||||| ||     
T  27611005 ctactaaagtgcgacatcagaaaggtagttatggtgaagcat-tggctgagcatgaaaagaggtttcaaaatgataagaataacatggagaggttgcagg 27610907  T
Q  216 aatggaagatggctctgaccaaagctgccaacttgtctggctaccat 262  Q
     ||||||  ||||||||| | | ||||| ||||| || |||||||||    
T  27610906 gatggaaagtggctctgagccaggctgcaaacttttccggctaccat 27610860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 17 - 121
Target Start/End: Complemental strand, 27677717 - 27677613
Alignment:
Q  17 tatgcatcttcttcattttgtttggacgaacttgtccacatcattcactgctataagacaaagggttgttcggttttgcctgttttctatggtgtggatc 116  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |    ||| |||||||||||| || |||||| |    
T  27677717 tatgcctcttcttcattttgtttggacgaacttgtccacatcattcactgctacaagacaaagggtcgcctcgttctgcctgttttctttgctgtggaac 27677618  T
Q  117 ctact 121  Q
    |||||    
T  27677617 ctact 27677613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 17 - 294
Target Start/End: Complemental strand, 27531300 - 27531023
Alignment:
Q  17 tatgcatcttcttcattttgtttggacgaacttgtccacatcattcactgctataagacaaagggttgttcggttttgcctgttttctatggtgtggatc 116  Q
    ||||||||||||||||||||||||||||||||||| ||||||| ||| |||||  | ||||||||||||   ||||||||||||||   |||||||||||    
T  27531300 tatgcatcttcttcattttgtttggacgaacttgttcacatcactcattgctacgatacaaagggttgtcttgttttgcctgtttttattggtgtggatc 27531201  T
Q  117 ctactcacatacgacatcagactggaagttacggtg-agcatcttactaagcatgaaaagaagttccaaaataacaaggaaaacatgcagaggttggagc 215  Q
    ||||| |  | |||||||| || || || || |||| ||||| |  ||  |||| |||| ||||| |||||| | ||||| ||||   |||||||| |||    
T  27531200 ctactgatgtgcgacatcacacaggtagatatggtgaagcat-tagctgtgcataaaaaaaagtttcaaaatgataaggataacactgagaggttgcagc 27531102  T
Q  216 aatggaagatggctctgaccaaagctgccaacttgtctggctaccattgtagtcaagggtaccccactatacttaaatc 294  Q
    |||||||    ||||||| | |||| || |||||||||||| | |||| ||  || ||||| |||||| ||||||||||    
T  27531101 aatggaaagaagctctgagccaagcggctaacttgtctggccagcattataaacatgggtagcccactttacttaaatc 27531023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 17 - 233
Target Start/End: Complemental strand, 27427709 - 27427493
Alignment:
Q  17 tatgcatcttcttcattttgtttggacgaacttgtccacatcattcactgctataagacaaagggttgttcggttttgcctgttttctatggtgtggatc 116  Q
    |||||||||||||||| ||||||||||  |||||||||||||||||||||||| || || ||||||||    |||||||||||||||| ||||||||| |    
T  27427709 tatgcatcttcttcatcttgtttggacacacttgtccacatcattcactgctacaaaaccaagggttgcctcgttttgcctgttttctttggtgtggaac 27427610  T
Q  117 ctactcacatacgacatcagactggaagttacggt-gagcatcttactaagcatgaaaagaagttccaaaataacaaggaaaacatgcagaggttggagc 215  Q
    ||||| |  | |||||||| || || || || |||  ||||| |  || |||||||||| | ||| |||||| | | | |||||||| |||||||| |||    
T  27427609 ctactgatgtgcgacatcatacaggtaggtatggtaaagcat-tggctgagcatgaaaataggtttcaaaatgatacgaaaaacatggagaggttgcagc 27427511  T
Q  216 aatggaagatggctctga 233  Q
    |||||||  |||||||||    
T  27427510 aatggaaagtggctctga 27427493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 17 - 114
Target Start/End: Complemental strand, 27698597 - 27698500
Alignment:
Q  17 tatgcatcttcttcattttgtttggacgaacttgtccacatcattcactgctataagacaaagggttgttcggttttgcctgttttctatggtgtgga 114  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||  ||||||||||| |    ||||||||||||||||  ||||||||    
T  27698597 tatgcatcttcttcattttgtttggacgaacttgtccacataattcactgctacgagacaaagggtcgcctcgttttgcctgttttcttcggtgtgga 27698500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 17 - 82
Target Start/End: Complemental strand, 27706505 - 27706440
Alignment:
Q  17 tatgcatcttcttcattttgtttggacgaacttgtccacatcattcactgctataagacaaagggt 82  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  27706505 tatgcctcttcttcattttgtttggacgaacttgtccacatcattcactgctacaagacaaagggt 27706440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 31 - 262
Target Start/End: Original strand, 26802540 - 26802771
Alignment:
Q  31 attttgtttggacgaacttgtccacatcattcactgctataagacaaagggttgttcggttttgcctgttttctatggtgtggatcctactcacatacga 130  Q
    |||||| |||||||||||||| ||||| ||||| |||||||||||||||||| |    || |||||| |||||| |||||||||||||||| |  | ||     
T  26802540 attttgcttggacgaacttgttcacattattcattgctataagacaaagggtcgcctcgtcttgcctattttctttggtgtggatcctactaatgtgcgc 26802639  T
Q  131 catcagactggaagttacggtg-agcatcttactaagcatgaaaagaagttccaaaataacaaggaaaacatgcagaggttggagcaatggaagatggct 229  Q
    ||||| ||  | || || |||| ||||| |  || |||||||||| | ||| |||||| | ||||| |||||| |||||||||||| ||||||  |||||    
T  26802640 catcatacatgtagctatggtgaagcat-tggctgagcatgaaaaaaggtttcaaaatgataaggataacatggagaggttggagcgatggaaagtggct 26802738  T
Q  230 ctgaccaaagctgccaacttgtctggctaccat 262  Q
    |||| | | ||||| |||||||| |||||||||    
T  26802739 ctgagccaggctgctaacttgtccggctaccat 26802771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 16 - 263
Target Start/End: Original strand, 26949744 - 26949991
Alignment:
Q  16 atatgcatcttcttcattttgtttggacgaacttgtccacatcattcactgctataagacaaagggttgttcggttttgcctgttttctatggtgtggat 115  Q
    |||||| ||||||||||||||||| |||||||||||||| |||||||||| ||  |||  ||| ||| |    ||| |||| |||||||||| ||| ||     
T  26949744 atatgcttcttcttcattttgtttagacgaacttgtccatatcattcactacttcaaggaaaaaggtcgccttgttctgccagttttctatgatgtagaa 26949843  T
Q  116 cctactcacatacgacatcagactggaagttacggtg-agcatcttactaagcatgaaaagaagttccaaaataacaaggaaaacatgcagaggttggag 214  Q
    ||| ||||| | |||||||||| |   ||||| |||| |||| ||| ||||||||||| ||| ||||||||| | |||  |||||||| || |||||  |    
T  26949844 ccttctcacgtgcgacatcagaattatagttatggtgaagca-cttgctaagcatgaagagaggttccaaaagagcaaaaaaaacatggagcggttgctg 26949942  T
Q  215 caatggaagatggctctgaccaaagctgccaacttgtctggctaccatt 263  Q
     |||||||||| ||||||| ||||| |||  |||| |||||||||||||    
T  26949943 aaatggaagatagctctgaacaaagttgctgacttatctggctaccatt 26949991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 25 - 137
Target Start/End: Complemental strand, 27724940 - 27724828
Alignment:
Q  25 ttcttcattttgtttggacgaacttgtccacatcattcactgctataagacaaagggttgttcggttttgcctgttttctatggtgtggatcctactcac 124  Q
    |||||| |||||||||||||||||||||||||| ||||||||||| |||||||||||| |    ||||||||||||||||  || ||||| |||||| ||    
T  27724940 ttcttcgttttgtttggacgaacttgtccacataattcactgctacaagacaaagggtcgcctcgttttgcctgttttcttcggcgtggaacctactaac 27724841  T
Q  125 atacgacatcaga 137  Q
     | ||||||||||    
T  27724840 gtgcgacatcaga 27724828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 17 - 283
Target Start/End: Original strand, 26861700 - 26861963
Alignment:
Q  17 tatgcatcttcttcattttgtttggacgaacttgtccacatcattcactgctataagacaaagggttgttcggttttgcctgttttctatggtgtggatc 116  Q
    ||||| ||||| |||||||||||||| ||||||||||| |||||| |||||   |||  ||||||| |    ||||||||||||||||||||  ||||||    
T  26861700 tatgcctcttcgtcattttgtttggatgaacttgtccaaatcattaactgc---aaggaaaagggtcgcgtcgttttgcctgttttctatggcatggatc 26861796  T
Q  117 ctactcacatacgacatcagactggaagttacggtga-gcatcttactaagcatgaaaagaagttccaaaataacaaggaaaacatgcagaggttggagc 215  Q
    ||||| |  | |||||||| |  || | ||| ||||| |||| |  ||||||||||||| | ||| |||||| | | ||| |||||| |||||||| ||     
T  26861797 ctactaatgtgcgacatcatagaggtatttatggtgaagcat-tggctaagcatgaaaaaaggtttcaaaatgatatggataacatggagaggttgcaga 26861895  T
Q  216 aatggaagatggctctgaccaaagctgccaacttgtctggctaccattgtagtcaagggtaccccact 283  Q
     ||||||  | ||||||| | ||||||| |||||||| |||||||||| |||||  ||||||||||||    
T  26861896 gatggaaagttgctctgaaccaagctgctaacttgtcaggctaccattttagtcctgggtaccccact 26861963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 24 - 269
Target Start/End: Original strand, 27214508 - 27214756
Alignment:
Q  24 cttcttcattttgtttggacgaacttgtccacatcattcactgctataagacaaagggttgttcggttttgcctgttttctatggtgtggatcctactca 123  Q
    |||||||||||||||||||||||||||||||||||| ||| ||||  |||  ||| ||| |    ||| | |||||||||||||| || || ||| ||||    
T  27214508 cttcttcattttgtttggacgaacttgtccacatcactcattgctccaaggaaaaaggtcgccttgttctacctgttttctatggcgttgaaccttctca 27214607  T
Q  124 catacgacatcaga-ctggaa--gttacggtgagcatcttactaagcatgaaaagaagttccaaaataacaaggaaaacatgcagaggttggagcaatgg 220  Q
    | | ||||||| || |   ||  |||| |||||    ||| ||||||||||| ||| ||| ||||||||||||||||||||| || ||||| || |||||    
T  27214608 cttgcgacatctgaacaacaacagttatggtgaagcgcttgctaagcatgaagagaggtttcaaaataacaaggaaaacatggagcggttgcagaaatgg 27214707  T
Q  221 aagatggctctgaccaaagctgccaacttgtctggctaccattgtagtc 269  Q
    ||||| ||||| | | ||||||| ||||| |||||||| |||| |||||    
T  27214708 aagatagctcttaaccaagctgctaacttatctggctatcattatagtc 27214756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 24 - 269
Target Start/End: Complemental strand, 27234720 - 27234472
Alignment:
Q  24 cttcttcattttgtttggacgaacttgtccacatcattcactgctataagacaaagggttgttcggttttgcctgttttctatggtgtggatcctactca 123  Q
    |||||||||||||||||||||||||||||||||||| ||| ||||  |||  ||| ||| |    ||| | |||||||||||||| || || ||| ||||    
T  27234720 cttcttcattttgtttggacgaacttgtccacatcactcattgctccaaggaaaaaggtcgccttgttctacctgttttctatggcgttgaaccttctca 27234621  T
Q  124 catacgacatcaga-ctggaa--gttacggtgagcatcttactaagcatgaaaagaagttccaaaataacaaggaaaacatgcagaggttggagcaatgg 220  Q
    | | ||||||| || |   ||  |||| |||||    ||| ||||||||||| ||| ||| ||||||||||||||||||||| || ||||| || |||||    
T  27234620 cttgcgacatctgaacaacaacagttatggtgaagcgcttgctaagcatgaagagaggtttcaaaataacaaggaaaacatggagcggttgcagaaatgg 27234521  T
Q  221 aagatggctctgaccaaagctgccaacttgtctggctaccattgtagtc 269  Q
    ||||| ||||| | | ||||||| ||||| |||||||| |||| |||||    
T  27234520 aagatagctcttaaccaagctgctaacttatctggctatcattatagtc 27234472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 23 - 107
Target Start/End: Original strand, 28150027 - 28150111
Alignment:
Q  23 tcttcttcattttgtttggacgaacttgtccacatcattcactgctataagacaaagggttgttcggttttgcctgttttctatg 107  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||  ||| |||||||||| |  ||| ||||| |||||||||    
T  28150027 tcttcttcattttgtttggacgaacttgtccacattattcactgcttcaaggcaaagggttgcttagttctgcctattttctatg 28150111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 16 - 123
Target Start/End: Complemental strand, 27604809 - 27604702
Alignment:
Q  16 atatgcatcttcttcattttgtttggacgaacttgtccacatcattcactgctataagacaaagggttgttcggttttgcctgttttctatggtgtggat 115  Q
    |||||| |||||||| ||||||||||| |||||||| ||||||||||| ||||| | |||||||||| |    |||||||||||||||| |||||||||     
T  27604809 atatgcctcttcttccttttgtttggatgaacttgttcacatcattcattgctacacgacaaagggtcgcgtcgttttgcctgttttctttggtgtggaa 27604710  T
Q  116 cctactca 123  Q
    ||| ||||    
T  27604709 ccttctca 27604702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 24 - 152
Target Start/End: Original strand, 26937185 - 26937313
Alignment:
Q  24 cttcttcattttgtttggacgaacttgtccacatcattcactgctataagacaaagggttgttcggttttgcctgttttctatggtgtggatcctactca 123  Q
    ||||||||||||||||||||||||||||||||||| || ||||||  |||||||| |||  |    |||||||| |||||||||  ||||||||| ||||    
T  26937185 cttcttcattttgtttggacgaacttgtccacatcgttgactgcttcaagacaaaaggtcatctaattttgcctattttctatgaagtggatccttctca 26937284  T
Q  124 catacgacatcagactggaagttacggtg 152  Q
    | | ||||| || ||||| ||||| ||||    
T  26937285 cgttcgacaccaaactgggagttatggtg 26937313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 24 - 202
Target Start/End: Original strand, 26848751 - 26848929
Alignment:
Q  24 cttcttcattttgtttggacgaacttgtccacatcattcactgctataagacaaagggttgttcggttttgcctgttttctatggtgtggatcctactca 123  Q
    ||||||| |||||||||||||||||||||||||||||||| ||||  |||  ||||||| |   |||| | ||||||||||||||  | || ||| ||||    
T  26848751 cttcttcgttttgtttggacgaacttgtccacatcattcattgctccaaggaaaagggtagcatggttattcctgttttctatggcatagaaccttctca 26848850  T
Q  124 catacgacatcagactggaagttacggtg-agcatcttactaagcatgaaaagaagttccaaaataacaaggaaaacatg 202  Q
      | |||||||||| | | ||||| |||| |||| ||| ||||||||||| ||  ||| |||||||||||||||| ||||    
T  26848851 tgtgcgacatcagaatagtagttatggtgaagca-cttgctaagcatgaagaggtgtttcaaaataacaaggaaagcatg 26848929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 17 - 68
Target Start/End: Original strand, 28181198 - 28181249
Alignment:
Q  17 tatgcatcttcttcattttgtttggacgaacttgtccacatcattcactgct 68  Q
    ||||| |||||||||||||| |||||||||||||||||||||||||||||||    
T  28181198 tatgcttcttcttcattttgcttggacgaacttgtccacatcattcactgct 28181249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 17 - 263
Target Start/End: Original strand, 28185450 - 28185696
Alignment:
Q  17 tatgcatcttcttcattttgtttggacgaacttgtccacatcattcactgctataagacaaagggttgttcggttttgcctgttttctatggtgtggatc 116  Q
    ||||| |||||||||||||| |||||||||||||||||||||||| ||||||  |||  ||  ||  ||   ||||||||  ||||||||| |||||| |    
T  28185450 tatgcttcttcttcattttgcttggacgaacttgtccacatcattaactgcttcaaggaaagcgggcgtctagttttgccaattttctatgatgtggaac 28185549  T
Q  117 ctactcacatacgacatcagactggaagttacggt-gagcatcttactaagcatgaaaagaagttccaaaataacaaggaaaacatgcagaggttggagc 215  Q
    || ||||| | |||||||| || || ||||| |||  |||| ||   | | |||  |||||||||||||||||||||||| | |||| |||||||| ||     
T  28185550 cttctcacgtgcgacatcacacgggcagttatggtaaagca-ctggatgatcatataaagaagttccaaaataacaaggatagcatggagaggttgcaga 28185648  T
Q  216 aatggaagatggctctgaccaaagctgccaacttgtctggctaccatt 263  Q
    |||||||||  ||||| ||  || |||| ||||| |||||| ||||||    
T  28185649 aatggaagagtgctcttactcaaactgctaacttctctggccaccatt 28185696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 172 - 231
Target Start/End: Original strand, 28234802 - 28234861
Alignment:
Q  172 aaagaagttccaaaataacaaggaaaacatgcagaggttggagcaatggaagatggctct 231  Q
    |||||||||||||||||||||||| |||||| |||||||| || ||||||||||||||||    
T  28234802 aaagaagttccaaaataacaaggataacatggagaggttgcagaaatggaagatggctct 28234861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 17 - 68
Target Start/End: Original strand, 28242888 - 28242939
Alignment:
Q  17 tatgcatcttcttcattttgtttggacgaacttgtccacatcattcactgct 68  Q
    ||||| |||||||||||||| |||||||||||||||||||||||||||||||    
T  28242888 tatgcttcttcttcattttgcttggacgaacttgtccacatcattcactgct 28242939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 17 - 68
Target Start/End: Complemental strand, 28297816 - 28297765
Alignment:
Q  17 tatgcatcttcttcattttgtttggacgaacttgtccacatcattcactgct 68  Q
    ||||| |||||||||||||| |||||||||||||||||||||||||||||||    
T  28297816 tatgcttcttcttcattttgcttggacgaacttgtccacatcattcactgct 28297765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 17 - 68
Target Start/End: Original strand, 28514257 - 28514308
Alignment:
Q  17 tatgcatcttcttcattttgtttggacgaacttgtccacatcattcactgct 68  Q
    ||||| |||||||||||||| |||||||||||||||||||||||||||||||    
T  28514257 tatgcttcttcttcattttgcttggacgaacttgtccacatcattcactgct 28514308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 17 - 63
Target Start/End: Original strand, 26975136 - 26975182
Alignment:
Q  17 tatgcatcttcttcattttgtttggacgaacttgtccacatcattca 63  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||    
T  26975136 tatgcttcttcttcattttgtttggacgaacttgtccacatcattca 26975182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 17 - 62
Target Start/End: Original strand, 2184372 - 2184417
Alignment:
Q  17 tatgcatcttcttcattttgtttggacgaacttgtccacatcattc 62  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||    
T  2184372 tatgcttcttcttcattttgtttggacgaacttgtccacatcattc 2184417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 17 - 65
Target Start/End: Original strand, 25071743 - 25071791
Alignment:
Q  17 tatgcatcttcttcattttgtttggacgaacttgtccacatcattcact 65  Q
    ||||| ||||||||||||||||| |||||||||||||||||||||||||    
T  25071743 tatgcttcttcttcattttgtttagacgaacttgtccacatcattcact 25071791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 17 - 68
Target Start/End: Complemental strand, 26342037 - 26341986
Alignment:
Q  17 tatgcatcttcttcattttgtttggacgaacttgtccacatcattcactgct 68  Q
    ||||| |||||||| |||||||||||||||||||||||||||||||| ||||    
T  26342037 tatgcttcttcttcgttttgtttggacgaacttgtccacatcattcattgct 26341986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 17 - 198
Target Start/End: Complemental strand, 28098472 - 28098291
Alignment:
Q  17 tatgcatcttcttcattttgtttggacgaacttgtccacatcattcactgcta-taagacaaagggttgttcggttttgcctgttttctatggtgtggat 115  Q
    ||||| |||||||  ||||||||||| ||||||||||||||||||||| | ||  |||| ||||||||| |  ||||| ||| |||| | ||  |||||     
T  28098472 tatgcttcttctttgttttgtttggatgaacttgtccacatcattcaccgttacgaaga-aaagggttgcttcgtttttcctattttttgtgacgtggaa 28098374  T
Q  116 cctactcacatacgacatcagactggaagttacggtg-agcatcttactaagcatgaaaagaagttccaaaataacaaggaaaa 198  Q
    ||| ||||| | ||||||||||| || ||||| |||| ||||| |  ||||||||||| ||| ||||||||||||||| |||||    
T  28098373 ccttctcacgtgcgacatcagacggggagttatggtgaagcat-tagctaagcatgaagagaggttccaaaataacaaagaaaa 28098291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 17 - 68
Target Start/End: Original strand, 28227034 - 28227085
Alignment:
Q  17 tatgcatcttcttcattttgtttggacgaacttgtccacatcattcactgct 68  Q
    ||||| |||||||||||||| |||||||||||||||||||||||||| ||||    
T  28227034 tatgcttcttcttcattttgcttggacgaacttgtccacatcattcattgct 28227085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 17 - 123
Target Start/End: Original strand, 31284372 - 31284478
Alignment:
Q  17 tatgcatcttcttcattttgtttggacgaacttgtccacatcattcactgctataagacaaagggttgttcggttttgcctgttttctatggtgtggatc 116  Q
    ||||| ||||| || ||||||||||||||||||||||||||||||||||  ||||||  ||| ||| |    |||||||| ||||||| ||| |||||||    
T  31284372 tatgcctcttcgtcgttttgtttggacgaacttgtccacatcattcacttgtataagcaaaatggtcgcctcgttttgcccgttttctttggcgtggatc 31284471  T
Q  117 ctactca 123  Q
    || ||||    
T  31284472 cttctca 31284478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #55
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 17 - 62
Target Start/End: Original strand, 2184982 - 2185027
Alignment:
Q  17 tatgcatcttcttcattttgtttggacgaacttgtccacatcattc 62  Q
    ||||| |||||||||||||||||||||||||||||||| |||||||    
T  2184982 tatgcttcttcttcattttgtttggacgaacttgtccatatcattc 2185027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #56
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 17 - 61
Target Start/End: Original strand, 28234648 - 28234692
Alignment:
Q  17 tatgcatcttcttcattttgtttggacgaacttgtccacatcatt 61  Q
    ||||| |||||||||||||| ||||||||||||||||||||||||    
T  28234648 tatgcttcttcttcattttgcttggacgaacttgtccacatcatt 28234692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #57
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 178 - 231
Target Start/End: Original strand, 26617867 - 26617920
Alignment:
Q  178 gttccaaaataacaaggaaaacatgcagaggttggagcaatggaagatggctct 231  Q
    ||||||||||||||||||||||||| || ||||| || |||||||||| |||||    
T  26617867 gttccaaaataacaaggaaaacatggagcggttgcagaaatggaagatagctct 26617920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #58
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 178 - 231
Target Start/End: Original strand, 26723795 - 26723848
Alignment:
Q  178 gttccaaaataacaaggaaaacatgcagaggttggagcaatggaagatggctct 231  Q
    ||||||||||||||||||||||||| || ||||| || |||||||||| |||||    
T  26723795 gttccaaaataacaaggaaaacatggagcggttgcagaaatggaagatagctct 26723848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #59
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 162 - 263
Target Start/End: Original strand, 26959395 - 26959496
Alignment:
Q  162 ctaagcatgaaaagaagttccaaaataacaaggaaaacatgcagaggttggagcaatggaagatggctctgaccaaagctgccaacttgtctggctacca 261  Q
    ||||||||||| || |||| ||||||| ||||||||||||| || |||||  | |||||||||  ||||| | | ||||||| ||||| |||||| ||||    
T  26959395 ctaagcatgaagagcagtttcaaaatagcaaggaaaacatggagcggttgctgaaatggaagaaagctcttaaccaagctgctaacttatctggccacca 26959494  T
Q  262 tt 263  Q
    ||    
T  26959495 tt 26959496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #60
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 174 - 263
Target Start/End: Complemental strand, 28297659 - 28297570
Alignment:
Q  174 agaagttccaaaataacaaggaaaacatgcagaggttggagcaatggaagatggctctgaccaaagctgccaacttgtctggctaccatt 263  Q
    |||||||||||||||||||| | |||||| |||||||| || |||||||||  ||||| ||  || |||| ||||| |||||| ||||||    
T  28297659 agaagttccaaaataacaagaataacatggagaggttgcagaaatggaagagtgctcttactcaaactgctaacttctctggccaccatt 28297570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #61
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 174 - 263
Target Start/End: Original strand, 28514414 - 28514503
Alignment:
Q  174 agaagttccaaaataacaaggaaaacatgcagaggttggagcaatggaagatggctctgaccaaagctgccaacttgtctggctaccatt 263  Q
    |||||||||||||||||||| | |||||| |||||||| || |||||||||  ||||| ||  || |||| ||||| |||||| ||||||    
T  28514414 agaagttccaaaataacaagaataacatggagaggttgcagaaatggaagagtgctcttactcaaactgctaacttctctggccaccatt 28514503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #62
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 16 - 68
Target Start/End: Original strand, 26635773 - 26635825
Alignment:
Q  16 atatgcatcttcttcattttgtttggacgaacttgtccacatcattcactgct 68  Q
    |||||| |||||||  ||||||||||| |||||||||||||||||||| ||||    
T  26635773 atatgcttcttctttgttttgtttggatgaacttgtccacatcattcattgct 26635825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #63
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 16 - 68
Target Start/End: Original strand, 26741739 - 26741791
Alignment:
Q  16 atatgcatcttcttcattttgtttggacgaacttgtccacatcattcactgct 68  Q
    |||||| |||||||  ||||||||||| |||||||||||||||||||| ||||    
T  26741739 atatgcttcttctttgttttgtttggatgaacttgtccacatcattcattgct 26741791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #64
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 24 - 68
Target Start/End: Complemental strand, 27665213 - 27665169
Alignment:
Q  24 cttcttcattttgtttggacgaacttgtccacatcattcactgct 68  Q
    |||||||||||||||| || |||||||||||||||||||| ||||    
T  27665213 cttcttcattttgtttagatgaacttgtccacatcattcattgct 27665169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #65
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 16 - 63
Target Start/End: Original strand, 26959249 - 26959296
Alignment:
Q  16 atatgcatcttcttcattttgtttggacgaacttgtccacatcattca 63  Q
    |||||| |||||||| |||| |||||| ||||||||||||||||||||    
T  26959249 atatgcttcttcttcgttttatttggatgaacttgtccacatcattca 26959296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #66
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 17 - 68
Target Start/End: Original strand, 28325565 - 28325616
Alignment:
Q  17 tatgcatcttcttcattttgtttggacgaacttgtccacatcattcactgct 68  Q
    ||||| |||||||| ||||| ||||| |||||||||||||| ||||||||||    
T  28325565 tatgcttcttcttccttttgcttggatgaacttgtccacattattcactgct 28325616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #67
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 89 - 147
Target Start/End: Original strand, 29826183 - 29826241
Alignment:
Q  89 gttttgcctgttttctatggtgtggatcctactcacatacgacatcagactggaagtta 147  Q
    ||||||||| ||||||||| |||||||||| ||||  | |||||||||||||| |||||    
T  29826183 gttttgcctattttctatgatgtggatccttctcatgtgcgacatcagactgggagtta 29826241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #68
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 143 - 256
Target Start/End: Complemental strand, 25506961 - 25506848
Alignment:
Q  143 agttacggtgagcatcttactaagcatgaaaagaagttccaaaataacaaggaaaacatgcagaggttggagcaatggaagatggctctgaccaaagctg 242  Q
    ||||| |||||  |||| |||||||||||| ||||||| |||||||| ||| |||||||| |||| | | | |||||||| || ||||| ||  || |||    
T  25506961 agttatggtgaagatctgactaagcatgaagagaagtttcaaaataataagaaaaacatggagagatcgcatcaatggaaaatagctctaacacaatctg 25506862  T
Q  243 ccaacttgtctggc 256  Q
    | ||| ||||||||    
T  25506861 ctaacctgtctggc 25506848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #69
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 162 - 263
Target Start/End: Original strand, 26635919 - 26636020
Alignment:
Q  162 ctaagcatgaaaagaagttccaaaataacaaggaaaacatgcagaggttggagcaatggaagatggctctgaccaaagctgccaacttgtctggctacca 261  Q
    ||||||||||| |  |||| ||||||| ||||||||||||| || |||||  | |||||||||  ||||| | | ||||||| ||||| |||||| ||||    
T  26635919 ctaagcatgaagatcagtttcaaaatagcaaggaaaacatggagtggttgctgaaatggaagaaagctcttaaccaagctgctaacttatctggccacca 26636018  T
Q  262 tt 263  Q
    ||    
T  26636019 tt 26636020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #70
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 162 - 263
Target Start/End: Original strand, 26741885 - 26741986
Alignment:
Q  162 ctaagcatgaaaagaagttccaaaataacaaggaaaacatgcagaggttggagcaatggaagatggctctgaccaaagctgccaacttgtctggctacca 261  Q
    ||||||||||| |  |||| ||||||| ||||||||||||| || |||||  | |||||||||  ||||| | | ||||||| ||||| |||||| ||||    
T  26741885 ctaagcatgaagatcagtttcaaaatagcaaggaaaacatggagtggttgctgaaatggaagaaagctcttaaccaagctgctaacttatctggccacca 26741984  T
Q  262 tt 263  Q
    ||    
T  26741985 tt 26741986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #71
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 178 - 231
Target Start/End: Original strand, 26811754 - 26811807
Alignment:
Q  178 gttccaaaataacaaggaaaacatgcagaggttggagcaatggaagatggctct 231  Q
    ||||||||||||||||||||||||| |  ||||| || |||||||||| |||||    
T  26811754 gttccaaaataacaaggaaaacatggatcggttgcagaaatggaagatagctct 26811807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 145; Significance: 4e-76; HSPs: 8)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 145; E-Value: 4e-76
Query Start/End: Original strand, 17 - 269
Target Start/End: Complemental strand, 18655567 - 18655315
Alignment:
Q  17 tatgcatcttcttcattttgtttggacgaacttgtccacatcattcactgctataagacaaagggttgttcggttttgcctgttttctatggtgtggatc 116  Q
    ||||| ||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||| ||   ||||| |||||||||||||| |||||||    
T  18655567 tatgcctcttcttcattttgtttggacgaacttgtccgcatcattcactgctacaagacaaagggtcgtctcgtttttcctgttttctatggcgtggatc 18655468  T
Q  117 ctactcacatacgacatcagactggaagttacggtgagcatcttactaagcatgaaaagaagttccaaaataacaaggaaaacatgcagaggttggagca 216  Q
    ||||||||||||||||||| ||||||||||| ||||| ||||| ||||||||   |||||| ||||||||||||||| |||||||| || ||||| | ||    
T  18655467 ctactcacatacgacatcaaactggaagttatggtgaacatctcactaagcacagaaagaatttccaaaataacaagaaaaacatggagcggttgcatca 18655368  T
Q  217 atggaagatggctctgaccaaagctgccaacttgtctggctaccattgtagtc 269  Q
    ||||||| ||||||||||| ||||||| |||||||| |||||||||| |||||    
T  18655367 atggaagttggctctgaccgaagctgctaacttgtccggctaccattctagtc 18655315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 145; E-Value: 4e-76
Query Start/End: Original strand, 17 - 297
Target Start/End: Complemental strand, 18731594 - 18731314
Alignment:
Q  17 tatgcatcttcttcattttgtttggacgaacttgtccacatcattcactgctataagacaaagggttgttcggttttgcctgttttctatggtgtggatc 116  Q
    ||||| |||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||| ||   |||||||||||||||||||| |||||||    
T  18731594 tatgcctcttcttcattttgtttggacgaacttgtccacatcatgcactgctacaagacaaagggtcgtcttgttttgcctgttttctatggcgtggatc 18731495  T
Q  117 ctactcacatacgacatcagactggaagttacggtgagcatcttactaagcatgaaaagaagttccaaaataacaaggaaaacatgcagaggttggagca 216  Q
    ||| ||||||||||||||| | ||| ||||| ||||| ||||| ||||||||  ||||||  ||||||||||||||| |||||||| || ||||| | ||    
T  18731494 ctagtcacatacgacatcaaagtgggagttatggtgaacatctcactaagcacaaaaagagtttccaaaataacaagaaaaacatggagcggttgcatca 18731395  T
Q  217 atggaagatggctctgaccaaagctgccaacttgtctggctaccattgtagtcaagggtaccccactatacttaaatcttg 297  Q
    ||||||| ||||||||||| ||||||| |||||||| |||||||||| |||||| |||||| || || ||||||| |||||    
T  18731394 atggaagttggctctgaccgaagctgctaacttgtccggctaccattttagtcatgggtactcctctttacttaattcttg 18731314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 17 - 297
Target Start/End: Complemental strand, 18699490 - 18699210
Alignment:
Q  17 tatgcatcttcttcattttgtttggacgaacttgtccacatcattcactgctataagacaaagggttgttcggttttgcctgttttctatggtgtggatc 116  Q
    ||||| ||||||||||||||||||||||||||||| ||||||||||||||||| |||||||| ||| ||   |||||||||||||||||||| || ||||    
T  18699490 tatgcctcttcttcattttgtttggacgaacttgttcacatcattcactgctacaagacaaaaggtcgtctcgttttgcctgttttctatggcgtagatc 18699391  T
Q  117 ctactcacatacgacatcagactggaagttacggtgagcatcttactaagcatgaaaagaagttccaaaataacaaggaaaacatgcagaggttggagca 216  Q
    ||||||||||||||||||| | ||| ||||| ||||| ||||| |||||||| | |||||  ||||||||||||||| |||||||| || ||||| | ||    
T  18699390 ctactcacatacgacatcaaagtgggagttatggtgaacatctcactaagcacggaaagagtttccaaaataacaagaaaaacatggagcggttgcatca 18699291  T
Q  217 atggaagatggctctgaccaaagctgccaacttgtctggctaccattgtagtcaagggtaccccactatacttaaatcttg 297  Q
    ||||||| | ||||||||| ||||||| |||||||| |||||||||| ||||   |||||| || || ||||||| |||||    
T  18699290 atggaagttagctctgaccgaagctgctaacttgtccggctaccattttagttctgggtactcctctttacttaattcttg 18699210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 17 - 297
Target Start/End: Complemental strand, 18724175 - 18723895
Alignment:
Q  17 tatgcatcttcttcattttgtttggacgaacttgtccacatcattcactgctataagacaaagggttgttcggttttgcctgttttctatggtgtggatc 116  Q
    ||||| |||||||||||||||||| ||||||||||||||||||| |||||||| |||||||||||| ||   |||||||||||||||||||| |||||||    
T  18724175 tatgcctcttcttcattttgtttgaacgaacttgtccacatcatgcactgctacaagacaaagggtcgtcttgttttgcctgttttctatggcgtggatc 18724076  T
Q  117 ctactcacatacgacatcagactggaagttacggtgagcatcttactaagcatgaaaagaagttccaaaataacaaggaaaacatgcagaggttggagca 216  Q
    ||| |||||||||||| || | ||| ||||| ||||| ||||| ||||||||  ||| ||  ||||||||||||||| |||||||| || ||||| | ||    
T  18724075 ctagtcacatacgacaccaaagtgggagttatggtgaacatctcactaagcacaaaatgagtttccaaaataacaagaaaaacatggagcggttgcatca 18723976  T
Q  217 atggaagatggctctgaccaaagctgccaacttgtctggctaccattgtagtcaagggtaccccactatacttaaatcttg 297  Q
    ||||||| ||||||||||| ||||||| |||||||| |||||||||| |||||  |||||| || || ||||||| |||||    
T  18723975 atggaagttggctctgaccgaagctgctaacttgtccggctaccattttagtcctgggtactcctctttacttaattcttg 18723895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 125; E-Value: 3e-64
Query Start/End: Original strand, 17 - 297
Target Start/End: Complemental strand, 18679657 - 18679377
Alignment:
Q  17 tatgcatcttcttcattttgtttggacgaacttgtccacatcattcactgctataagacaaagggttgttcggttttgcctgttttctatggtgtggatc 116  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||   |||||||||||||||||||  |||||||    
T  18679657 tatgcctcttcttcattttgtttggacgaacttgtccacatcattcactgctacaagacaaagggtcgtcttgttttgcctgttttctatgtcgtggatc 18679558  T
Q  117 ctactcacatacgacatcagactggaagttacggtgagcatcttactaagcatgaaaagaagttccaaaataacaaggaaaacatgcagaggttggagca 216  Q
    ||||||||||| ||||||| | ||| ||||| ||||| ||||| ||||| ||   |||||  ||||||||||||||  |||||||| || ||||| | ||    
T  18679557 ctactcacatatgacatcaaagtggtagttatggtgaacatctcactaatcactgaaagagtttccaaaataacaataaaaacatggagcggttgcatca 18679458  T
Q  217 atggaagatggctctgaccaaagctgccaacttgtctggctaccattgtagtcaagggtaccccactatacttaaatcttg 297  Q
    ||||||| | ||||||||| ||||||| |||||||| |||||||||| |||||  |||||| || || ||||||| |||||    
T  18679457 atggaagttagctctgaccgaagctgctaacttgtccggctaccattttagtcctgggtactcctctttacttaattcttg 18679377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 17 - 233
Target Start/End: Original strand, 18073846 - 18074062
Alignment:
Q  17 tatgcatcttcttcattttgtttggacgaacttgtccacatcattcactgctataagacaaagggttgttcggttttgcctgttttctatggtgtggatc 116  Q
    |||||||||||||||| ||||||||||  |||||||||||||||||||||||| || || ||||||||    |||||||||||||||| ||||||||| |    
T  18073846 tatgcatcttcttcatcttgtttggacacacttgtccacatcattcactgctacaaaaccaagggttgcctcgttttgcctgttttctttggtgtggaac 18073945  T
Q  117 ctactcacatacgacatcagactggaagttacggt-gagcatcttactaagcatgaaaagaagttccaaaataacaaggaaaacatgcagaggttggagc 215  Q
    ||||| |  | |||||||| || || || || |||  ||||| |  || |||||||||| | ||| |||||| | | | |||||||| |||||||| |||    
T  18073946 ctactgatgtgcgacatcatacaggtaggtatggtaaagcat-tggctgagcatgaaaataggtttcaaaatgatacgaaaaacatggagaggttgcagc 18074044  T
Q  216 aatggaagatggctctga 233  Q
    |||||||  |||||||||    
T  18074045 aatggaaagtggctctga 18074062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 17 - 153
Target Start/End: Complemental strand, 5091057 - 5090921
Alignment:
Q  17 tatgcatcttcttcattttgtttggacgaacttgtccacatcattcactgctataagacaaagggttgttcggttttgcctgttttctatggtgtggatc 116  Q
    ||||| |||||||| |||||||| || ||||||||||| || ||||||||||  |||  ||| |||||   |||||||||| |||||||||||||||| |    
T  5091057 tatgcttcttcttcgttttgtttagatgaacttgtccatattattcactgctccaaggaaaatggttgcctggttttgcctattttctatggtgtggaac 5090958  T
Q  117 ctactcacatacgacatcagactggaagttacggtga 153  Q
    || ||||  | ||| |||||||||||||||| |||||    
T  5090957 cttctcatgtgcgatatcagactggaagttatggtga 5090921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 17 - 69
Target Start/End: Complemental strand, 17989143 - 17989091
Alignment:
Q  17 tatgcatcttcttcattttgtttggacgaacttgtccacatcattcactgcta 69  Q
    |||||||||||||||| ||||||||||  ||||||||||||||||||||||||    
T  17989143 tatgcatcttcttcatcttgtttggacacacttgtccacatcattcactgcta 17989091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 129; Significance: 1e-66; HSPs: 1)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 17 - 277
Target Start/End: Complemental strand, 29273873 - 29273613
Alignment:
Q  17 tatgcatcttcttcattttgtttggacgaacttgtccacatcattcactgctataagacaaagggttgttcggttttgcctgttttctatggtgtggatc 116  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||    |||||||||| |||||||| |||||||    
T  29273873 tatgcctcttcttcattttgtttggacgaacttgtccacatcattcactgctacaagacaaagggtcgtctcattttgcctgtcttctatggcgtggatc 29273774  T
Q  117 ctactcacatacgacatcagactggaagttacggtgagcatcttactaagcatgaaaagaagttccaaaataacaaggaaaacatgcagaggttggagca 216  Q
    ||||||||||||||||||| | ||| ||||| ||||| ||||| |||||| | ||| |||  |||||||||| |||| |||||||| |  ||||| | ||    
T  29273773 ctactcacatacgacatcaaagtgggagttatggtgaacatctcactaagtacgaagagagtttccaaaatagcaagaaaaacatggatcggttgcatca 29273674  T
Q  217 atggaagatggctctgaccaaagctgccaacttgtctggctaccattgtagtcaagggtac 277  Q
    ||||||| ||||||||||| ||||| | ||||||||||||||||||| |||||| ||||||    
T  29273673 atggaagttggctctgacccaagcttctaacttgtctggctaccattctagtcatgggtac 29273613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 125; Significance: 3e-64; HSPs: 3)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 125; E-Value: 3e-64
Query Start/End: Original strand, 17 - 269
Target Start/End: Complemental strand, 268447 - 268195
Alignment:
Q  17 tatgcatcttcttcattttgtttggacgaacttgtccacatcattcactgctataagacaaagggttgttcggttttgcctgttttctatggtgtggatc 116  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||| ||    ||||||| || |||||||| |||||||    
T  268447 tatgcctcttcttcattttgtttggacgaacttgtccacatcattcactgctacaagaaaaagggtcgtctcattttgcccgtcttctatggcgtggatc 268348  T
Q  117 ctactcacatacgacatcagactggaagttacggtgagcatcttactaagcatgaaaagaagttccaaaataacaaggaaaacatgcagaggttggagca 216  Q
    ||||||||||||||||||| | ||| ||||| ||||| ||||| |||||||| ||| |||  |||||||||| |||| |||||||| || ||||| | ||    
T  268347 ctactcacatacgacatcaaagtgggagttatggtgaacatctcactaagcacgaagagagtttccaaaatagcaagaaaaacatggagcggttgcatca 268248  T
Q  217 atggaagatggctctgaccaaagctgccaacttgtctggctaccattgtagtc 269  Q
    ||||||| ||||||||||| ||||| | ||||||||||||||||||| |||||    
T  268247 atggaagttggctctgacccaagcttctaacttgtctggctaccattctagtc 268195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 121; E-Value: 8e-62
Query Start/End: Original strand, 17 - 297
Target Start/End: Complemental strand, 28127769 - 28127489
Alignment:
Q  17 tatgcatcttcttcattttgtttggacgaacttgtccacatcattcactgctataagacaaagggttgttcggttttgcctgttttctatggtgtggatc 116  Q
    ||||| ||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||| |    |||||||||||||||| ||| |||||||    
T  28127769 tatgcctcttcttcattttgtttggacgaacttgtgcacatcattcactgctacaagacaaagggtcgcctagttttgcctgttttctttggcgtggatc 28127670  T
Q  117 ctactcacatacgacatcagactggaagttacggtgagcatcttactaagcatgaaaagaagttccaaaataacaaggaaaacatgcagaggttggagca 216  Q
    ||||| |  | ||| |||| || || ||||| |||||  | ||| ||||||||| | ||| |||||||||||||||| |||||||| || | ||| | ||    
T  28127669 ctactgatgtgcgatatcatacagggagttatggtgaagagcttgctaagcatggagagaggttccaaaataacaagaaaaacatggagcgattgcacca 28127570  T
Q  217 atggaagatggctctgaccaaagctgccaacttgtctggctaccattgtagtcaagggtaccccactatacttaaatcttg 297  Q
    ||||||||| ||||| ||| ||||||| |||||||| |||||||||| ||||| ||||||||| |||||||||||||||||    
T  28127569 atggaagatagctctaacccaagctgctaacttgtccggctaccattatagtccagggtaccctactatacttaaatcttg 28127489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 113; E-Value: 5e-57
Query Start/End: Original strand, 17 - 297
Target Start/End: Complemental strand, 28164452 - 28164173
Alignment:
Q  17 tatgcatcttcttcattttgtttggacgaacttgtccacatcattcactgctataagacaaagggttgttcggttttgcctgttttctatggtgtggatc 116  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |    |||||||||||||||| ||| |||||||    
T  28164452 tatgcctcttcttcattttgtttggacgaacttgtccacatcattcactgctacaagacaaagggtcgcctagttttgcctgttttct-tggcgtggatc 28164354  T
Q  117 ctactcacatacgacatcagactggaagttacggtgagcatcttactaagcatgaaaagaagttccaaaataacaaggaaaacatgcagaggttggagca 216  Q
    ||||| |  | |||||||| || || ||||| ||  |  |||||||||||||||   ||| |||||||||||||||| |||||||| || | ||| | ||    
T  28164353 ctactgatgtgcgacatcatacagggagttatggcaaagatcttactaagcatggtgagaggttccaaaataacaagaaaaacatggagcgattgcacca 28164254  T
Q  217 atggaagatggctctgaccaaagctgccaacttgtctggctaccattgtagtcaagggtaccccactatacttaaatcttg 297  Q
    ||||||||| ||||| ||| ||||||| |||||||| |||||||||| ||||| ||||||||  || ||||||||||||||    
T  28164253 atggaagatagctctaacccaagctgctaacttgtccggctaccattatagtccagggtaccttacaatacttaaatcttg 28164173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0277 (Bit Score: 86; Significance: 6e-41; HSPs: 2)
Name: scaffold0277
Description:

Target: scaffold0277; HSP #1
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 25 - 277
Target Start/End: Complemental strand, 4766 - 4514
Alignment:
Q  25 ttcttcattttgtttggacgaacttgtccacatcattcactgctataagacaaagggttgttcggttttgcctgttttctatggtgtggatcctactcac 124  Q
    |||||| |||||||||||||||||||||||||| ||||||||||| |||||||||||| |    ||||||||||||||||  || ||||| |||||| ||    
T  4766 ttcttcgttttgtttggacgaacttgtccacataattcactgctacaagacaaagggtcgcctcgttttgcctgttttcttcggcgtggaacctactaac 4667  T
Q  125 atacgacatcagactggaagttacggtga-gcatcttactaagcatgaaaagaagttccaaaataacaaggaaaacatgcagaggttggagcaatggaag 223  Q
     | ||||||| ||  || ||||| ||||| |||| |  || |||||||||||| ||| |||||| | ||| | |||||| |||||||| | |||||||||    
T  4666 gtgcgacatctgaaaggtagttatggtgaagcat-tggctgagcatgaaaagaggtttcaaaatgataagaataacatggagaggttgcatcaatggaag 4568  T
Q  224 atggctctgaccaaagctgccaacttgtctggctaccattgtagtcaagggtac 277  Q
     ||||||||||| ||||||| |||||||| |||||||||| |||||| ||||||    
T  4567 ttggctctgacccaagctgctaacttgtccggctaccattctagtcatgggtac 4514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0277; HSP #2
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 31 - 277
Target Start/End: Complemental strand, 13721 - 13475
Alignment:
Q  31 attttgtttggacgaacttgtccacatcattcactgctataagacaaagggttgttcggttttgcctgttttctatggtgtggatcctactcacatacga 130  Q
    |||||| |||||||||||||| ||||| ||||| ||||| |||||||| ||| |    |||||||||||||||| |||||||||||||||| |  | |||    
T  13721 attttgcttggacgaacttgttcacattattcattgctacaagacaaaaggtcgcctcgttttgcctgttttctttggtgtggatcctactaatgtgcga 13622  T
Q  131 catcagactggaagttacggtga-gcatcttactaagcatgaaaagaagttccaaaataacaaggaaaacatgcagaggttggagcaatggaagatggct 229  Q
    ||||| || ||  |||| ||||| |||| |  ||   |||||||||| ||| |||||| | ||| | |||||| || | ||| | ||||||||| |||||    
T  13621 catcatacaggtcgttatggtgaagcat-tggctggacatgaaaagaggtttcaaaatgataagaataacatggagcgattgcatcaatggaagttggct 13523  T
Q  230 ctgaccaaagctgccaacttgtctggctaccattgtagtcaagggtac 277  Q
    |||||| ||||||| |||||||| |||||||||| |||||| ||||||    
T  13522 ctgacccaagctgctaacttgtccggctaccattctagtcatgggtac 13475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0349 (Bit Score: 61; Significance: 5e-26; HSPs: 2)
Name: scaffold0349
Description:

Target: scaffold0349; HSP #1
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 17 - 121
Target Start/End: Complemental strand, 3524 - 3420
Alignment:
Q  17 tatgcatcttcttcattttgtttggacgaacttgtccacatcattcactgctataagacaaagggttgttcggttttgcctgttttctatggtgtggatc 116  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |    ||| |||||||||| | ||||||||| |    
T  3524 tatgcctcttcttcattttgtttggacgaacttgtccacatcattcactgctacaagacaaagggtcgcctcgttctgcctgttttatttggtgtggaac 3425  T
Q  117 ctact 121  Q
    |||||    
T  3424 ctact 3420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0349; HSP #2
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 25 - 262
Target Start/End: Complemental strand, 14451 - 14214
Alignment:
Q  25 ttcttcattttgtttggacgaacttgtccacatcattcactgctataagacaaagggttgttcggttttgcctgttttctatggtgtggatcctactcac 124  Q
    |||||| |||||||||||||||||||||||||| ||||||||||| |||||||||||| |    ||||||||||||||||  || ||||| |||||| ||    
T  14451 ttcttcgttttgtttggacgaacttgtccacataattcactgctacaagacaaagggtcgcctcgttttgcctgttttcttcggcgtggaacctactaac 14352  T
Q  125 atacgacatcagactggaagttacggtg-agcatcttactaagcatgaaaagaagttccaaaataacaaggaaaacatgcagaggttggagcaatggaag 223  Q
     | ||||||||||  || ||||| |||| ||||| |  || |||||||||||| ||| |||||| |   | |||||||| |||||||| ||  ||||||     
T  14351 gtgcgacatcagaaaggtagttatggtgaagcat-tggctgagcatgaaaagaggtttcaaaatgatccgaaaaacatggagaggttgcagggatggaaa 14253  T
Q  224 atggctctgaccaaagctgccaacttgtctggctaccat 262  Q
      |||||||| | | ||||| |||||||| |||||||||    
T  14252 gaggctctgagccaggctgctaacttgtccggctaccat 14214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 58; Significance: 3e-24; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 17 - 233
Target Start/End: Original strand, 59654 - 59870
Alignment:
Q  17 tatgcatcttcttcattttgtttggacgaacttgtccacatcattcactgctataagacaaagggttgttcggttttgcctgttttctatggtgtggatc 116  Q
    |||||||||||||||| ||||||||||  |||||||||||||||||||||||| || || ||||||||    |||||||||||||||| ||||||||| |    
T  59654 tatgcatcttcttcatcttgtttggacacacttgtccacatcattcactgctacaaaaccaagggttgcctcgttttgcctgttttctttggtgtggaac 59753  T
Q  117 ctactcacatacgacatcagactggaagttacggt-gagcatcttactaagcatgaaaagaagttccaaaataacaaggaaaacatgcagaggttggagc 215  Q
    ||||| |  | |||||||| || || || || |||  ||||| |  || |||||||||| | ||| |||||| | | | |||||||| |||||||| |||    
T  59754 ctactgatgtgcgacatcatacaggtaggtatggtaaagcat-tggctgagcatgaaaataggtttcaaaatgatacgaaaaacatggagaggttgcagc 59852  T
Q  216 aatggaagatggctctga 233  Q
    |||||||  |||||||||    
T  59853 aatggaaagtggctctga 59870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0419 (Bit Score: 56; Significance: 5e-23; HSPs: 1)
Name: scaffold0419
Description:

Target: scaffold0419; HSP #1
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 31 - 277
Target Start/End: Original strand, 7623 - 7869
Alignment:
Q  31 attttgtttggacgaacttgtccacatcattcactgctataagacaaagggttgttcggttttgcctgttttctatggtgtggatcctactcacatacga 130  Q
    |||||| |||||||||||||| ||||| ||||| ||||| |||||| | ||| |    |||||||||||||||| |||||||||||||||| |  | |||    
T  7623 attttgcttggacgaacttgttcacattattcattgctacaagacagaaggtcgcctcgttttgcctgttttctttggtgtggatcctactaatgtgcga 7722  T
Q  131 catcagactggaagttacggtga-gcatcttactaagcatgaaaagaagttccaaaataacaaggaaaacatgcagaggttggagcaatggaagatggct 229  Q
    ||||| || ||  |||| ||||| |||| |  ||   |||||||||| ||| |||||| | ||| | |||||| || | ||| | ||||||||| |||||    
T  7723 catcatacaggtcgttatggtgaagcat-tggctggacatgaaaagaggtttcaaaatgataagaataacatggagcgattgcatcaatggaagttggct 7821  T
Q  230 ctgaccaaagctgccaacttgtctggctaccattgtagtcaagggtac 277  Q
    |||||| ||||||| |||||||| |||||||||| |||||| ||||||    
T  7822 ctgacccaagctgctaacttgtccggctaccattctagtcatgggtac 7869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0038 (Bit Score: 52; Significance: 1e-20; HSPs: 4)
Name: scaffold0038
Description:

Target: scaffold0038; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 17 - 231
Target Start/End: Original strand, 34809 - 35023
Alignment:
Q  17 tatgcatcttcttcattttgtttggacgaacttgtccacatcattcactgctataagacaaagggttgttcggttttgcctgttttctatggtgtggatc 116  Q
    ||||| |||||||||||||| |||||||||||||||||||||||||||||||  |||  ||  ||  ||   ||||||||  ||||||||| |||||| |    
T  34809 tatgcttcttcttcattttgcttggacgaacttgtccacatcattcactgcttcaaggaaagcgggcgtctagttttgccaattttctatgatgtggaac 34908  T
Q  117 ctactcacatacgacatcagactggaagttacggt-gagcatcttactaagcatgaaaagaagttccaaaataacaaggaaaacatgcagaggttggagc 215  Q
    || ||||| | |||||||| |  || ||||| |||  |||| ||   | | |||  |||||||||||||||||||||||| |||||| |||||||| ||     
T  34909 cttctcacgtgcgacatcacaagggcagttatggtaaagca-ctggatgatcatataaagaagttccaaaataacaaggataacatggagaggttgcaga 35007  T
Q  216 aatggaagatggctct 231  Q
    ||||||||||||||||    
T  35008 aatggaagatggctct 35023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0038; HSP #2
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 17 - 68
Target Start/End: Original strand, 43050 - 43101
Alignment:
Q  17 tatgcatcttcttcattttgtttggacgaacttgtccacatcattcactgct 68  Q
    ||||| |||||||||||||| |||||||||||||||||||||||||||||||    
T  43050 tatgcttcttcttcattttgcttggacgaacttgtccacatcattcactgct 43101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0038; HSP #3
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 17 - 68
Target Start/End: Original strand, 27532 - 27583
Alignment:
Q  17 tatgcatcttcttcattttgtttggacgaacttgtccacatcattcactgct 68  Q
    ||||| |||||||||||||| |||||||||||||||||||||||||| ||||    
T  27532 tatgcttcttcttcattttgcttggacgaacttgtccacatcattcattgct 27583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0038; HSP #4
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 17 - 68
Target Start/End: Original strand, 116880 - 116931
Alignment:
Q  17 tatgcatcttcttcattttgtttggacgaacttgtccacatcattcactgct 68  Q
    ||||| |||||||| ||||| ||||| |||||||||||||| ||||||||||    
T  116880 tatgcttcttcttccttttgcttggatgaacttgtccacattattcactgct 116931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 2)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 17 - 277
Target Start/End: Complemental strand, 17993787 - 17993527
Alignment:
Q  17 tatgcatcttcttcattttgtttggacgaacttgtccacatcattcactgctataagacaaagggttgttcggttttgcctgttttctatggtgtggatc 116  Q
    ||||| ||||||||||||||||| ||||||||||||||||||||||| ||||  ||   |||||||    ||||  | ||||||||||||||    || |    
T  17993787 tatgcttcttcttcattttgtttagacgaacttgtccacatcattcaatgctccaatgaaaagggtacgacggtaattcctgttttctatggcacagaac 17993688  T
Q  117 ctactcacatacgacatcagactggaagttacggtg-agcatcttactaagcatgaaaagaagttccaaaataacaaggaaaacatgcagaggttggagc 215  Q
    || ||||  | |||||||||| ||  ||||| |||| |||| ||| ||||||||||| ||   || ||||||| ||||||||||||| || |||||  |     
T  17993687 cttctcaggtgcgacatcagaatgatagttatggtgaagca-cttgctaagcatgaagagggttttcaaaatagcaaggaaaacatggagcggttgttga 17993589  T
Q  216 aatggaagatggctctgaccaaagctgccaacttgtctggctaccattgtagtcaagggtac 277  Q
    |||||||||  ||||| | | ||||||| ||||| |||||| ||||||  | ||||||||||    
T  17993588 aatggaagaaagctcttaaccaagctgctaacttatctggccaccatttcaatcaagggtac 17993527  T

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Target: chr2; HSP #2
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 17 - 68
Target Start/End: Original strand, 3279772 - 3279823
Alignment:
Q  17 tatgcatcttcttcattttgtttggacgaacttgtccacatcattcactgct 68  Q
    ||||| ||||||  ||||||||||||||||||||||||||||||||| ||||    
T  3279772 tatgcttcttctatattttgtttggacgaacttgtccacatcattcattgct 3279823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 17 - 68
Target Start/End: Complemental strand, 58385 - 58334
Alignment:
Q  17 tatgcatcttcttcattttgtttggacgaacttgtccacatcattcactgct 68  Q
    ||||| |||||||||||||| ||| |||||||||||||||||||||||||||    
T  58385 tatgcttcttcttcattttgcttgaacgaacttgtccacatcattcactgct 58334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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