View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5921_low_74 (Length: 251)
Name: NF5921_low_74
Description: NF5921
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5921_low_74 |
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Alignment Details
Target: chr7 (Bit Score: 230; Significance: 1e-127; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 230; E-Value: 1e-127
Query Start/End: Original strand, 1 - 234
Target Start/End: Original strand, 42600606 - 42600839
Alignment:
| Q |
1 |
tgggacattgttatccttattgtcctcaaccagatttgactatgggtattacaccgcatacagatccttgtgctattactttgttgttgcagaatcaggt |
100 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
42600606 |
tgggacattgttatccttattgtcctcaaccagatttgactatgggtattacaccgcatacagatccttgtgctattactttgttgttgcagaatcaggt |
42600705 |
T |
|
| Q |
101 |
tccgggattgcaggtgaagtatgaaggtgagtgggttgatgttaacccggttcaaggtggtatcatcgttaatattggcgactttctccaggtatgtctt |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
42600706 |
tccgggattgcaggtgaagtatgaaggtgagtgggttgatgttaacccggttcaaggtggtatcatcgttaatattggcgactttctccaggtatgtctt |
42600805 |
T |
|
| Q |
201 |
tagaaattaaaaagtatttccttgagtcactatt |
234 |
Q |
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|||||||||||||||| ||||||||||||||||| |
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| T |
42600806 |
tagaaattaaaaagtacttccttgagtcactatt |
42600839 |
T |
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