View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF5922-Insertion-1 (Length: 595)

Name: NF5922-Insertion-1
Description: NF5922
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF5922-Insertion-1
NF5922-Insertion-1
[»] chr3 (59 HSPs)
chr3 (9-355)||(52204120-52204467)
chr3 (355-595)||(52203560-52203783)
chr3 (104-350)||(27164028-27164274)
chr3 (66-333)||(52695580-52695849)
chr3 (35-305)||(46979397-46979669)
chr3 (253-345)||(52203965-52204057)
chr3 (375-511)||(45472804-45472942)
chr3 (355-494)||(27163755-27163896)
chr3 (355-529)||(7628816-7628991)
chr3 (180-341)||(40614775-40614935)
chr3 (180-332)||(20369265-20369415)
chr3 (94-355)||(7629191-7629452)
chr3 (190-350)||(38489726-38489887)
chr3 (399-474)||(43472053-43472127)
chr3 (355-527)||(46978982-46979155)
chr3 (64-277)||(51241338-51241541)
chr3 (206-345)||(20179038-20179174)
chr3 (190-345)||(29324043-29324199)
chr3 (365-473)||(36505017-36505127)
chr3 (167-345)||(20619202-20619379)
chr3 (365-464)||(38489559-38489654)
chr3 (399-501)||(21854054-21854156)
chr3 (35-228)||(43471583-43471777)
chr3 (235-355)||(45472607-45472727)
chr3 (399-494)||(21858549-21858644)
chr3 (235-355)||(32835245-32835366)
chr3 (36-246)||(39615142-39615352)
chr3 (399-529)||(52695221-52695351)
chr3 (399-476)||(12176452-12176528)
chr3 (190-341)||(35296386-35296536)
chr3 (372-505)||(51240618-51240752)
chr3 (406-465)||(21842915-21842974)
chr3 (399-474)||(36171907-36171981)
chr3 (71-142)||(36172147-36172218)
chr3 (211-344)||(36504805-36504937)
chr3 (399-464)||(2111721-2111785)
chr3 (355-437)||(20178762-20178846)
chr3 (419-459)||(17063819-17063859)
chr3 (355-458)||(20368965-20369071)
chr3 (399-467)||(35433585-35433652)
chr3 (365-501)||(29324413-29324551)
chr3 (548-595)||(52203481-52203528)
chr3 (399-473)||(16343248-16343321)
chr3 (406-468)||(47014725-47014787)
chr3 (399-464)||(2119214-2119279)
chr3 (378-494)||(31489175-31489292)
chr3 (399-443)||(24121416-24121460)
chr3 (49-149)||(36504653-36504753)
chr3 (399-509)||(12736808-12736915)
chr3 (79-142)||(24120913-24120976)
chr3 (355-423)||(35296662-35296732)
chr3 (71-157)||(45472455-45472539)
chr3 (421-463)||(49508045-49508087)
chr3 (196-342)||(1341681-1341829)
chr3 (418-483)||(10224169-10224234)
chr3 (94-142)||(12176695-12176743)
chr3 (94-142)||(16343032-16343080)
chr3 (412-468)||(22610311-22610367)
chr3 (356-429)||(39614784-39614859)
[»] chr7 (42 HSPs)
chr7 (35-355)||(45648218-45648540)
chr7 (35-355)||(47843761-47844083)
chr7 (79-355)||(42040451-42040730)
chr7 (110-341)||(34471642-34471874)
chr7 (79-355)||(48152880-48153159)
chr7 (48-363)||(3751481-3751799)
chr7 (399-501)||(40837306-40837408)
chr7 (196-350)||(40836356-40836511)
chr7 (196-345)||(43495758-43495908)
chr7 (48-355)||(45491977-45492290)
chr7 (355-529)||(42040084-42040258)
chr7 (355-529)||(43728247-43728423)
chr7 (196-345)||(22201069-22201217)
chr7 (196-345)||(22236604-22236752)
chr7 (399-497)||(43495543-43495641)
chr7 (103-324)||(2185763-2185986)
chr7 (375-529)||(25310636-25310792)
chr7 (54-323)||(31397217-31397488)
chr7 (355-509)||(22542585-22542737)
chr7 (399-499)||(48138805-48138904)
chr7 (399-474)||(9229313-9229387)
chr7 (397-467)||(44797877-44797947)
chr7 (34-147)||(45804739-45804852)
chr7 (375-463)||(48153236-48153326)
chr7 (37-142)||(24699651-24699756)
chr7 (55-310)||(48138325-48138582)
chr7 (83-271)||(25482695-25482883)
chr7 (420-509)||(46191908-46191996)
chr7 (223-287)||(42509175-42509239)
chr7 (103-142)||(44798409-44798448)
chr7 (402-509)||(47278293-47278400)
chr7 (355-458)||(45492493-45492597)
chr7 (103-142)||(9229554-9229593)
chr7 (399-466)||(24699962-24700028)
chr7 (100-142)||(2483638-2483680)
chr7 (418-468)||(3393522-3393572)
chr7 (281-355)||(7857940-7858014)
chr7 (412-474)||(21180325-21180387)
chr7 (377-464)||(45647920-45648008)
chr7 (274-355)||(25310999-25311080)
chr7 (355-417)||(47843504-47843568)
chr7 (377-446)||(7858214-7858285)
[»] chr2 (49 HSPs)
chr2 (72-345)||(36467052-36467325)
chr2 (48-355)||(7017652-7017963)
chr2 (355-526)||(36467466-36467637)
chr2 (79-356)||(11562719-11562993)
chr2 (105-345)||(35298312-35298554)
chr2 (206-355)||(41323867-41324017)
chr2 (79-355)||(38221608-38221886)
chr2 (194-355)||(42794768-42794930)
chr2 (355-530)||(7018146-7018323)
chr2 (181-350)||(37272909-37273078)
chr2 (195-355)||(30485559-30485719)
chr2 (375-464)||(40364016-40364107)
chr2 (375-511)||(35306432-35306570)
chr2 (375-474)||(40498828-40498928)
chr2 (190-342)||(16496802-16496955)
chr2 (349-509)||(26352911-26353070)
chr2 (74-298)||(40498426-40498652)
chr2 (398-470)||(8948347-8948419)
chr2 (156-355)||(17328636-17328835)
chr2 (399-509)||(36925885-36925993)
chr2 (375-464)||(5591051-5591142)
chr2 (196-325)||(2788872-2789001)
chr2 (196-342)||(3353078-3353228)
chr2 (190-287)||(35428727-35428824)
chr2 (48-272)||(38140401-38140627)
chr2 (372-505)||(38595719-38595853)
chr2 (406-494)||(43344555-43344642)
chr2 (71-150)||(42794943-42795022)
chr2 (400-474)||(14749645-14749718)
chr2 (355-464)||(41324216-41324324)
chr2 (211-304)||(44364254-44364347)
chr2 (375-517)||(17329059-17329207)
chr2 (227-355)||(38558643-38558769)
chr2 (355-499)||(30382465-30382610)
chr2 (79-233)||(30382908-30383063)
chr2 (33-89)||(36925371-36925427)
chr2 (282-350)||(40498676-40498744)
chr2 (71-142)||(14749411-14749482)
chr2 (79-342)||(26352443-26352705)
chr2 (399-509)||(3353485-3353595)
chr2 (355-446)||(11561978-11562071)
chr2 (35-140)||(35428582-35428688)
chr2 (222-299)||(18561094-18561171)
chr2 (399-511)||(11458169-11458280)
chr2 (401-519)||(38141972-38142082)
chr2 (35-142)||(18858273-18858380)
chr2 (190-304)||(40363774-40363889)
chr2 (355-449)||(37272614-37272711)
chr2 (235-300)||(21812979-21813044)
[»] chr8 (43 HSPs)
chr8 (45-363)||(25429837-25430159)
chr8 (35-363)||(24888754-24889085)
chr8 (79-355)||(11789368-11789646)
chr8 (365-531)||(23877122-23877289)
chr8 (103-345)||(6166309-6166552)
chr8 (64-351)||(12006553-12006837)
chr8 (190-355)||(32855981-32856146)
chr8 (71-355)||(9409774-9410058)
chr8 (95-332)||(13003232-13003466)
chr8 (190-345)||(18928566-18928721)
chr8 (399-529)||(17748432-17748558)
chr8 (35-323)||(17748925-17749215)
chr8 (399-528)||(11789003-11789130)
chr8 (355-510)||(16591071-16591225)
chr8 (399-501)||(2813419-2813521)
chr8 (190-355)||(23877387-23877553)
chr8 (190-272)||(24728632-24728715)
chr8 (375-510)||(24728192-24728328)
chr8 (355-449)||(13003567-13003663)
chr8 (355-529)||(9410189-9410366)
chr8 (399-474)||(37232148-37232223)
chr8 (372-499)||(31430981-31431110)
chr8 (72-345)||(11990590-11990863)
chr8 (399-481)||(12007077-12007159)
chr8 (79-233)||(11755785-11755940)
chr8 (412-493)||(39296614-39296695)
chr8 (375-463)||(11755405-11755495)
chr8 (399-510)||(14180468-14180579)
chr8 (163-282)||(16591524-16591642)
chr8 (399-465)||(9136405-9136471)
chr8 (405-474)||(24888449-24888518)
chr8 (193-233)||(18320690-18320730)
chr8 (248-332)||(18320731-18320814)
chr8 (199-345)||(31431397-31431544)
chr8 (375-459)||(32856224-32856309)
chr8 (195-345)||(9136733-9136883)
chr8 (236-310)||(37231784-37231858)
chr8 (420-493)||(31332273-31332346)
chr8 (417-450)||(32425396-32425429)
chr8 (105-142)||(35536811-35536848)
chr8 (418-483)||(36484458-36484523)
chr8 (431-503)||(11991101-11991173)
chr8 (412-468)||(13422647-13422703)
[»] chr6 (22 HSPs)
chr6 (32-355)||(688074-688399)
chr6 (103-345)||(2988133-2988376)
chr6 (71-355)||(2032350-2032637)
chr6 (71-345)||(12312028-12312303)
chr6 (399-516)||(8486307-8486423)
chr6 (375-529)||(7435026-7435183)
chr6 (375-464)||(2987953-2988044)
chr6 (83-350)||(8485797-8486064)
chr6 (35-355)||(10229251-10229573)
chr6 (116-350)||(32340276-32340509)
chr6 (377-530)||(2031977-2032130)
chr6 (375-464)||(10229652-10229743)
chr6 (71-142)||(12283903-12283974)
chr6 (355-463)||(30928570-30928680)
chr6 (248-350)||(30928334-30928436)
chr6 (400-529)||(22296979-22297113)
chr6 (399-481)||(1929255-1929336)
chr6 (211-304)||(22053869-22053962)
chr6 (399-492)||(17533111-17533203)
chr6 (72-142)||(7495258-7495328)
chr6 (190-306)||(22297370-22297486)
chr6 (401-464)||(12283466-12283529)
[»] chr4 (66 HSPs)
chr4 (93-355)||(4775659-4775918)
chr4 (55-352)||(45773839-45774134)
chr4 (79-355)||(2295225-2295502)
chr4 (196-355)||(44987234-44987394)
chr4 (38-344)||(47922951-47923260)
chr4 (195-350)||(53586368-53586524)
chr4 (79-343)||(10037870-10038137)
chr4 (377-529)||(19721333-19721486)
chr4 (377-497)||(53586595-53586716)
chr4 (365-500)||(6008400-6008537)
chr4 (103-355)||(35103508-35103762)
chr4 (195-329)||(35823608-35823742)
chr4 (157-266)||(24913782-24913890)
chr4 (399-500)||(34072678-34072778)
chr4 (358-464)||(40217887-40217995)
chr4 (358-476)||(22198549-22198669)
chr4 (106-355)||(53018559-53018810)
chr4 (190-266)||(24917499-24917575)
chr4 (95-306)||(15476789-15477002)
chr4 (105-342)||(40217435-40217673)
chr4 (399-497)||(38947541-38947638)
chr4 (128-355)||(19721701-19721930)
chr4 (355-511)||(2295694-2295850)
chr4 (190-326)||(27675401-27675539)
chr4 (218-341)||(28102017-28102139)
chr4 (355-459)||(47922699-47922805)
chr4 (79-149)||(4214134-4214204)
chr4 (398-469)||(54163089-54163162)
chr4 (404-481)||(42399349-42399426)
chr4 (399-464)||(47724571-47724635)
chr4 (412-470)||(6332305-6332363)
chr4 (356-434)||(22588325-22588405)
chr4 (375-460)||(25059081-25059166)
chr4 (418-503)||(49195925-49196010)
chr4 (355-459)||(7208217-7208324)
chr4 (355-464)||(28101696-28101807)
chr4 (102-142)||(47724801-47724841)
chr4 (71-139)||(53586253-53586321)
chr4 (399-434)||(1052556-1052591)
chr4 (355-510)||(2242523-2242683)
chr4 (72-228)||(34075281-34075438)
chr4 (377-529)||(45774347-45774500)
chr4 (96-150)||(2243064-2243118)
chr4 (378-457)||(15476442-15476522)
chr4 (409-503)||(44746772-44746866)
chr4 (190-300)||(45661801-45661911)
chr4 (93-149)||(27675303-27675359)
chr4 (372-437)||(44987611-44987678)
chr4 (377-438)||(45662010-45662073)
chr4 (402-433)||(1052522-1052553)
chr4 (399-474)||(43770273-43770348)
chr4 (372-463)||(4776091-4776184)
chr4 (398-464)||(25204311-25204377)
chr4 (48-141)||(7208693-7208786)
chr4 (404-461)||(9656188-9656245)
chr4 (418-483)||(24784965-24785030)
chr4 (418-483)||(24823236-24823301)
chr4 (292-345)||(24917590-24917643)
chr4 (418-483)||(42630014-42630079)
chr4 (55-139)||(1052196-1052280)
chr4 (231-287)||(2242922-2242978)
chr4 (163-287)||(4110251-4110374)
chr4 (243-355)||(6008221-6008333)
chr4 (80-140)||(28103609-28103669)
chr4 (418-474)||(49470782-49470838)
chr4 (377-434)||(53018290-53018349)
[»] scaffold0565 (2 HSPs)
scaffold0565 (79-332)||(7753-8008)
scaffold0565 (399-511)||(8274-8388)
[»] chr1 (52 HSPs)
chr1 (79-352)||(31513615-31513890)
chr1 (54-355)||(14286844-14287147)
chr1 (71-345)||(11767650-11767926)
chr1 (96-343)||(4973086-4973337)
chr1 (71-350)||(40693772-40694054)
chr1 (71-355)||(17116090-17116378)
chr1 (355-529)||(10443754-10443930)
chr1 (103-355)||(13558358-13558610)
chr1 (102-343)||(4966555-4966800)
chr1 (196-350)||(16122756-16122912)
chr1 (399-501)||(22790805-22790906)
chr1 (355-517)||(41827994-41828152)
chr1 (355-528)||(31513254-31513428)
chr1 (399-470)||(31183818-31183889)
chr1 (195-345)||(38682926-38683077)
chr1 (399-501)||(50709816-50709917)
chr1 (358-530)||(2137127-2137300)
chr1 (375-464)||(11767469-11767560)
chr1 (399-523)||(17116623-17116746)
chr1 (409-528)||(13558703-13558821)
chr1 (399-501)||(46593940-46594041)
chr1 (399-492)||(30193732-30193824)
chr1 (375-464)||(4967030-4967120)
chr1 (355-464)||(25294327-25294437)
chr1 (190-345)||(270896-271050)
chr1 (190-305)||(10443528-10443643)
chr1 (399-501)||(17936092-17936193)
chr1 (399-464)||(4972762-4972827)
chr1 (190-306)||(13643778-13643894)
chr1 (238-355)||(50726663-50726780)
chr1 (355-464)||(49899482-49899593)
chr1 (399-466)||(9380384-9380451)
chr1 (64-141)||(30902574-30902651)
chr1 (73-355)||(51898929-51899213)
chr1 (48-142)||(17936410-17936504)
chr1 (400-436)||(13644144-13644180)
chr1 (39-209)||(40032453-40032628)
chr1 (102-142)||(50727123-50727163)
chr1 (421-509)||(51898494-51898581)
chr1 (196-287)||(29488210-29488301)
chr1 (410-509)||(29488948-29489047)
chr1 (376-458)||(14287365-14287448)
chr1 (95-202)||(10443401-10443508)
chr1 (357-434)||(38682637-38682716)
chr1 (399-466)||(42603219-42603286)
chr1 (174-255)||(41827628-41827709)
chr1 (400-437)||(35160468-35160505)
chr1 (36-76)||(22791367-22791407)
chr1 (418-474)||(28658429-28658485)
chr1 (418-474)||(38949178-38949234)
chr1 (406-510)||(46285771-46285874)
chr1 (106-150)||(50726540-50726584)
[»] chr5 (43 HSPs)
chr5 (72-345)||(7056947-7057218)
chr5 (71-355)||(29231072-29231358)
chr5 (35-356)||(3387087-3387409)
chr5 (35-258)||(19100124-19100349)
chr5 (190-350)||(13407260-13407420)
chr5 (355-529)||(19099674-19099849)
chr5 (365-481)||(2627766-2627884)
chr5 (190-350)||(2627962-2628124)
chr5 (190-341)||(27925522-27925673)
chr5 (34-367)||(31113980-31114314)
chr5 (365-517)||(8229486-8229640)
chr5 (198-345)||(5836480-5836627)
chr5 (190-352)||(26564917-26565080)
chr5 (375-525)||(31113624-31113776)
chr5 (375-501)||(34764452-34764581)
chr5 (72-272)||(39935459-39935660)
chr5 (375-530)||(13406942-13407096)
chr5 (228-355)||(32076531-32076658)
chr5 (399-501)||(39730539-39730641)
chr5 (190-350)||(34510804-34510965)
chr5 (200-300)||(31210910-31211010)
chr5 (359-458)||(7057333-7057435)
chr5 (35-217)||(34764723-34764905)
chr5 (399-529)||(39935983-39936114)
chr5 (195-345)||(16756081-16756231)
chr5 (402-504)||(26565191-26565293)
chr5 (201-355)||(41368580-41368733)
chr5 (399-489)||(39329756-39329845)
chr5 (399-464)||(16755761-16755826)
chr5 (399-528)||(32076157-32076286)
chr5 (355-467)||(36906955-36907067)
chr5 (355-466)||(27925799-27925912)
chr5 (399-467)||(7732574-7732641)
chr5 (355-452)||(8802512-8802611)
chr5 (445-529)||(29230720-29230804)
chr5 (252-343)||(8229316-8229407)
chr5 (412-474)||(18001525-18001587)
chr5 (355-434)||(29230799-29230879)
chr5 (416-474)||(42455124-42455182)
chr5 (418-483)||(26794011-26794076)
chr5 (405-458)||(31210550-31210603)
chr5 (79-136)||(32076657-32076714)
chr5 (94-310)||(42990547-42990766)
[»] scaffold0495 (2 HSPs)
scaffold0495 (35-355)||(5969-6288)
scaffold0495 (375-466)||(6367-6459)
[»] scaffold0015 (2 HSPs)
scaffold0015 (355-474)||(38249-38370)
scaffold0015 (107-149)||(38481-38523)
[»] scaffold0027 (1 HSPs)
scaffold0027 (399-504)||(8997-9102)
[»] scaffold0051 (2 HSPs)
scaffold0051 (399-481)||(53892-53973)
scaffold0051 (71-135)||(53652-53716)
[»] scaffold0464 (1 HSPs)
scaffold0464 (403-509)||(5813-5917)
[»] scaffold0581 (1 HSPs)
scaffold0581 (205-265)||(10046-10106)


Alignment Details
Target: chr3 (Bit Score: 288; Significance: 1e-161; HSPs: 59)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 288; E-Value: 1e-161
Query Start/End: Original strand, 9 - 355
Target Start/End: Complemental strand, 52204467 - 52204120
Alignment:
Q  9 tctctctcttactcttaggctgataccta-tgaagtccgaatactgcaaaatggaaacgtacccgtatcgaataccgatacttcatggatacttgcggat 107  Q
    ||||||||||||||||||||| ||||||| ||||| | |||||||  |||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  52204467 tctctctcttactcttaggctaatacctaatgaagcctgaatactttaaaatggaaacgtacccgtatcgaataccgatacttcatggatactcgcggat 52204368  T
Q  108 acgtacccacgaagtatcataattaattattttaaattttaatcttttttatctgatacgtatagaatattccacagatacaacaaggatacttataaga 207  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  52204367 acgtacccacgaagtatcataattaattattttaaattttaatcttttttatctgatacttatagaatattccacagatacaacaaggatacttataaga 52204268  T
Q  208 tatttcacaaatacgtatcctagaaatgatgaagggtaagaaagtgagacaatgttgtaaaaatttagtagaaatgtatacgaatcaattttagatatga 307  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||    
T  52204267 tatttcacaaatacgtatcctagaaatgatgaagggtaagaaagtgagacaatgttgtaaaaatttagtagaaatgtatatgaatcaattttaaatatga 52204168  T
Q  308 atctgtaaaattgtttctcgatgaactacttaaaattacacttattgt 355  Q
    ||  ||||||||||||| |||||||||||||||||||| |||||||||    
T  52204167 atgagtaaaattgtttcccgatgaactacttaaaattatacttattgt 52204120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 153; E-Value: 8e-81
Query Start/End: Original strand, 355 - 595
Target Start/End: Complemental strand, 52203783 - 52203560
Alignment:
Q  355 taatgaagggtaattagtgcttattttcttcaagtgctttacatatataagttttagtataaattttttgttaacgtatcttagccgtatcgtatcctaa 454  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||    
T  52203783 taatgaagggtaattagtgcttattttcttcaagtgttttacatatataagttttagtataaaatttttgttaacgtatcttagccgaatcgtatcctaa 52203684  T
Q  455 attttaaaaattttgcgtattcacgtatctgtatcgtatcgtacccgcacccgtatctgtatctgggcttcataggctcatatccatcataaaaaatcct 554  Q
    |||||||||| |||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||                 | ||||||||||||    
T  52203683 attttaaaaaatttgcgtattcacgtatccgtatcgtatcgtatccgcacccgtatctgtatctgggct-----------------ttataaaaaatcct 52203601  T
Q  555 tattttctcttattttcttctttccgttattttgcttatgg 595  Q
     ||||||||||||||||||||||||||||||||||||||||    
T  52203600 aattttctcttattttcttctttccgttattttgcttatgg 52203560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 104 - 350
Target Start/End: Complemental strand, 27164274 - 27164028
Alignment:
Q  104 ggatacgtacccacgaagtatcataattaattattttaaattttaa--tcttttttatctgatacgtatagaatattccacagatacaacaaggatactt 201  Q
    ||||||||||  || |||||||  ||||||||||||  | ||||||  | | ||||||||||||| ||| | ||| |||| ||||||| |||||||||||    
T  27164274 ggatacgtacttacaaagtatcggaattaattatttacatttttaaaatatattttatctgatacttattggatactccatagataca-caaggatactt 27164176  T
Q  202 ataagatatttcacaaatacgtatcctagaaatgatgaagggtaagaaagtgagacaatgttgtaaaaatttagtagaaatgtatacgaatcaattttag 301  Q
    |||||||| |||||| |||||||||||||||| ||||||||| || |||||||||||| |||||| ||||| |||||| ||||||| || ||||||||||    
T  27164175 ataagatacttcacatatacgtatcctagaaaagatgaagggaaa-aaagtgagacaacgttgtagaaattcagtagagatgtatatgattcaattttag 27164077  T
Q  302 atatgaatctgtaaaattgtttctcgatgaactacttaaaattacactt 350  Q
    ||||| |||  || |||| ||||||||||||| ||||||| ||| ||||    
T  27164076 atatgcatcaatataattatttctcgatgaaccacttaaatttatactt 27164028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 81; E-Value: 8e-38
Query Start/End: Original strand, 66 - 333
Target Start/End: Complemental strand, 52695849 - 52695580
Alignment:
Q  66 gtacccgtatcgaataccgatacttcatggatacttgcggatacgtacccacgaagtatcataattaattattttaaattttaatc---ttttttatctg 162  Q
    |||||||||||| ||||||||||| || |||||||   ||| ||||||||||||||||||| ||||||||||||||| ||||||     | ||||||  |    
T  52695849 gtacccgtatcggataccgatactccacggatactcttggaaacgtacccacgaagtatcagaattaattattttaatttttaaaaaaatattttattgg 52695750  T
Q  163 atacgtatagaatattccacagatacaacaaggatacttataagatatttcacaaatacgtatcctagaaatgatgaagggtaagaaagtgagacaatgt 262  Q
    |||| | ||| ||| | |||| ||||| ||| ||| |||||||||||||||||| |||| ||||||| ||| |||||||||| | ||||||||||||| |    
T  52695749 atacatgtaggatacttcacaaataca-caaagatgcttataagatatttcacagatacttatcctataaaagatgaagggtcaaaaagtgagacaattt 52695651  T
Q  263 tgtaaaaatttagtagaaatgtatacgaatcaattttagatatgaatctgtaaaattgtttctcgatgaac 333  Q
    ||||||||||  ||||| |||| || |  ||||||||||||||| |||  || |||| ||||| |||||||    
T  52695650 tgtaaaaattccgtagagatgtgtatggttcaattttagatatgcatcattagaattatttcttgatgaac 52695580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 35 - 305
Target Start/End: Complemental strand, 46979669 - 46979397
Alignment:
Q  35 ctatgaagtccgaatactgcaaaatggaaacgtacccgtatcgaataccgatacttcatggatacttgcggatacgtacccacgaagtatcataattaat 134  Q
    ||||||||  || ||||| ||||||||| |||||||||||||| ||||||||||| || || |||| ||  ||| |||||||| |||||||| |||||||    
T  46979669 ctatgaagctcggatactccaaaatggagacgtacccgtatcggataccgatactccacgggtactcgcaaatatgtacccacaaagtatcagaattaat 46979570  T
Q  135 tattttaaattttaat--cttttttatctgatacgtatagaatattccacagatacaacaaggatacttataagatatttcacaaatacgtatcctag-a 231  Q
    |||||||| |||||||   | ||||||| ||||| |||   ||| ||||    || ||||||||||||| ||| ||| |||| | ||||||||||||| |    
T  46979569 tattttaatttttaataaatattttatcggatacttatttgatactccatgtgta-aacaaggatacttctaaaatacttcaaagatacgtatcctagaa 46979471  T
Q  232 aatgatgaagggtaagaaagtgagacaatgttgtaaaaatttagtagaaatgtatacgaatcaattttagatat 305  Q
    || ||||||| |||| |||||||||||| |||||||||||| | || | ||||||| || ||||||||||||||    
T  46979470 aaagatgaagagtaaaaaagtgagacaacgttgtaaaaattcattatagatgtataagattcaattttagatat 46979397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 253 - 345
Target Start/End: Complemental strand, 52204057 - 52203965
Alignment:
Q  253 gagacaatgttgtaaaaatttagtagaaatgtatacgaatcaattttagatatgaatctgtaaaattgtttctcgatgaactacttaaaatta 345  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||  ||||||||||||| ||||||||||||||||||||    
T  52204057 gagacaatgttgtaaaaatttagtagaaatgtatatgaatcaattttaaatatgaatgagtaaaattgtttcccgatgaactacttaaaatta 52203965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 375 - 511
Target Start/End: Original strand, 45472804 - 45472942
Alignment:
Q  375 ttattttcttcaagtgctttacata--tataagttttagtataaattttttgttaacgtatcttagccgtatcgtatcctaaattttaaaaattttgcgt 472  Q
    |||||||||||||||  ||||||||  ||||||||||| ||||||  |||||||||| |||||||||| ||||||||||||||||||||||| || || |    
T  45472804 ttattttcttcaagtattttacatacatataagttttaatataaaaattttgttaacatatcttagccatatcgtatcctaaattttaaaaaattcgcat 45472903  T
Q  473 attcacgtatctgtatcgtatcgtacccgcacccgtatc 511  Q
    || | |||| | |||||||||||||| ||||||||||||    
T  45472904 atccgcgtacccgtatcgtatcgtactcgcacccgtatc 45472942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 355 - 494
Target Start/End: Complemental strand, 27163896 - 27163755
Alignment:
Q  355 taatgaagggtaattagtgcttattttcttcaagtgctttacatatata--agttttagtataaattttttgttaacgtatcttagccgtatcgtatcct 452  Q
    |||||||||||| | | || ||||||||||||||   ||||||||||||  |||||||||||||| |||||||||||||||||||||||||||||||| |    
T  27163896 taatgaagggtactcaatgattattttcttcaagaattttacatatatataagttttagtataaaatttttgttaacgtatcttagccgtatcgtatctt 27163797  T
Q  453 aaattttaaaaattttgcgtattcacgtatctgtatcgtatc 494  Q
    |||||| |||||||| || ||| ||| ||  |||||||||||    
T  27163796 aaatttaaaaaatttcgcttatccacatacttgtatcgtatc 27163755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 355 - 529
Target Start/End: Complemental strand, 7628991 - 7628816
Alignment:
Q  355 taatgaagggtaattagtgcttattttcttcaagtgctttacata--tataagttttagtataaattttttgttaacgtatcttagccgtatcgtatcct 452  Q
    |||||||| ||||| | || | |||||||||||||| ||||||||  ||||||||| | ||||||||||| ||||||||||| || |||||| |||||||    
T  7628991 taatgaagagtaatcaatgttaattttcttcaagtgttttacatacatataagtttaattataaattttt-gttaacgtatcctaaccgtattgtatcct 7628893  T
Q  453 aaattttaaaaattttgcgtattcacgtatctgtatcgtatcgtacccgcacccgtatctgtatctgggcttcatag 529  Q
    |||||||||||| || ||||||   |||| | ||| |||||||||| |||| ||||||| ||||| |||||||||||    
T  7628892 aaattttaaaaaattcgcgtatctgcgtacccgtaccgtatcgtactcgcaaccgtatccgtatcggggcttcatag 7628816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 180 - 341
Target Start/End: Original strand, 40614775 - 40614935
Alignment:
Q  180 cacagatacaacaaggatacttataagatatttcacaaatacgtatcctagaaatgatgaagggtaagaaagtgagacaatgttgtaaaaatttagtaga 279  Q
    |||||||||| ||| ||||||||||||||| |||| | ||||||||| |||||| |||||| ||||| ||||||||||||| ||||||||||| | ||||    
T  40614775 cacagataca-caaagatacttataagatacttcatagatacgtatcttagaaaagatgaaaggtaaaaaagtgagacaatattgtaaaaattcattaga 40614873  T
Q  280 aatgtatacgaatcaattttagatatgaatctgtaaaattgtttctcgatgaactacttaaa 341  Q
     ||||||| |  ||||||||||||||  |||  || | |||||||||||||||| |||||||    
T  40614874 gatgtatatggttcaattttagatatacatcattagagttgtttctcgatgaaccacttaaa 40614935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 180 - 332
Target Start/End: Complemental strand, 20369415 - 20369265
Alignment:
Q  180 cacagatacaacaaggatacttataagatatttcacaaatacgtatcctagaaatgatgaagggtaagaaagtgagacaatgttgtaaaaatttagtaga 279  Q
    |||||||||| |||||||||||||||||||||||||| |||| |||||| |||| ||| |||||||| ||||||| |||||||||| |||||| | | ||    
T  20369415 cacagataca-caaggatacttataagatatttcacatatacatatccttgaaaagattaagggtaaaaaagtgatacaatgttgtgaaaattaatttga 20369317  T
Q  280 aatgtatacgaatcaattttagatatgaatctgtaaaattgtttctcgatgaa 332  Q
     ||||||| || |||||||||||| || |||  || |||||||||||||||||    
T  20369316 gatgtatatgattcaattttagat-tgcatcaatataattgtttctcgatgaa 20369265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 94 - 355
Target Start/End: Complemental strand, 7629452 - 7629191
Alignment:
Q  94 ggatacttgcggatacgtacccacgaagtatcataattaattattttaaattttaatc--ttttttatctgatacgtatagaatattccacagatacaac 191  Q
    ||||||| || |||||||| ||||||||||||| ||||||||||||||| |||||||   | ||||||| ||||| | |   ||| |||||| ||||| |    
T  7629452 ggatactcgcagatacgtatccacgaagtatcagaattaattattttaatttttaataaatattttatcggatacttgtgtgatactccacatataca-c 7629354  T
Q  192 aaggatacttataagatatttcacaaatacgtatcctagaaat-gatgaagggtaagaaagtgagacaatgttgtaaaaatttagtagaaatgtatacga 290  Q
    |||||||||| ||||||| |||||| |  | |||||||||||  |||| |  |||| ||  ||||||||||||||||||||| |  | | ||||||| ||    
T  7629353 aaggatacttctaagatacttcacagaagcatatcctagaaaaagatgcacagtaaaaa--tgagacaatgttgtaaaaattcataatagatgtatatga 7629256  T
Q  291 atcaattttagatatgaatctgtaaaattgtttctcgatgaactacttaaaattacacttattgt 355  Q
     ||||||||||||||| |||  || |||||||||||||||||  ||||||||||| |||| ||||    
T  7629255 ctcaattttagatatgcatcaatagaattgtttctcgatgaaacacttaaaattatacttcttgt 7629191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 190 - 350
Target Start/End: Complemental strand, 38489887 - 38489726
Alignment:
Q  190 acaaggatacttataagatatttcacaaata--cgtatcctagaaatgatgaagggtaagaaagtgagacaatgttgtaaaaatttagtagaaatgtata 287  Q
    |||| |||||||||||||||||||||| |||  ||||||||| |||  |||||  |||| ||||||| | ||||||||||| ||| |||||| |||||||    
T  38489887 acaatgatacttataagatatttcacacatatacgtatcctaaaaaa-atgaatagtaaaaaagtgatataatgttgtaaacattcagtagagatgtata 38489789  T
Q  288 cgaatcaattttagatatgaatctgtaaaattgtttctcgatgaactacttaaaattacactt 350  Q
     || ||||||||||||||| ||   || |||||||||||||||||| ||||||||||| ||||    
T  38489788 tgattcaattttagatatgcataactataattgtttctcgatgaaccacttaaaattatactt 38489726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 399 - 474
Target Start/End: Original strand, 43472053 - 43472127
Alignment:
Q  399 atataagttttagtataaattttttgttaacgtatcttagccgtatcgtatcctaaattttaaaaattttgcgtat 474  Q
    |||||| ||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  43472053 atataaattttagtataaatattttgttaacgtatcttagccgtatcgtatcct-aattttaaaaattttgcgtat 43472127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 355 - 527
Target Start/End: Complemental strand, 46979155 - 46978982
Alignment:
Q  355 taatgaagggtaattagtgcttattttcttcaagtgctttacatata--taagttttagtataaattttttgttaacgtatcttagccgtatcgtatcct 452  Q
    |||||||| |||||||||| |  |||||||| |||  |||||||| |  ||| ||||| ||||||||||| ||||||||||| |  ||||||| ||||||    
T  46979155 taatgaagagtaattagtgttacttttcttctagtattttacatacagataaattttattataaattttt-gttaacgtatcctgaccgtatcatatcct 46979057  T
Q  453 aaattttaaaaattttgcgtattcacgtatctgtatcgtatcgtacccgcacccgtatctgtatctgggcttcat 527  Q
    |||||| ||||| || |||||| | ||||||  |||||||||||||||||||||||||| ||||| | |||||||    
T  46979056 aaatttaaaaaaattcgcgtatccgcgtatccatatcgtatcgtacccgcacccgtatccgtatcggagcttcat 46978982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 64 - 277
Target Start/End: Complemental strand, 51241541 - 51241338
Alignment:
Q  64 acgtacccgtatcgaataccgatacttcatggatacttgcggatacgtacccacgaagtatcataattaattattttaaattttaatc--ttttttatct 161  Q
    |||| ||||||||||||| ||||||||||  |||||| ||||||| ||||| | ||||||| | ||||||||||||||| ||||||    | |||||||     
T  51241541 acgtgcccgtatcgaatatcgatacttcactgatactcgcggatatgtacctatgaagtatgagaattaattattttaatttttaaaaaatattttatca 51241442  T
Q  162 gatacgtatagaatattccacagatacaacaaggatacttataagatatttcacaaatacgtatcctagaaatgatgaagggtaagaaagtgagacaatg 261  Q
     ||||           |||||||||||| ||| ||||||||||||||| ||||||   |||||||||||||| ||||| |||||| ||||||||||||||    
T  51241441 aatac-----------tccacagataca-caaagatacttataagatacttcacattaacgtatcctagaaaagatgatgggtaaaaaagtgagacaatg 51241354  T
Q  262 ttgtaaaaatttagta 277  Q
    ||||||||||| ||||    
T  51241353 ttgtaaaaattcagta 51241338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 206 - 345
Target Start/End: Complemental strand, 20179174 - 20179038
Alignment:
Q  206 gatatttcacaaatacgtatcctagaaatgatgaagggtaagaaagtgagacaatgttgtaaaaatttagtagaaatgtatacgaatcaattttagatat 305  Q
    |||| |||||| | |||||||||||||| ||||||||| || ||||||||||||||||||| ||||| || |||  |||||| || ||||||||||||||    
T  20179174 gatacttcacagaaacgtatcctagaaaagatgaaggggaa-aaagtgagacaatgttgtagaaattcaggaga--tgtatatgattcaattttagatat 20179078  T
Q  306 gaatctgtaaaattgtttctcgatgaactacttaaaatta 345  Q
    | ||| ||  |||||||||| ||||||| |||||||||||    
T  20179077 gtatcagttgaattgtttcttgatgaaccacttaaaatta 20179038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 190 - 345
Target Start/End: Original strand, 29324043 - 29324199
Alignment:
Q  190 acaaggatacttataagatatttcacaaatacgtatcctagaaat-gatgaagggtaagaaagtgagacaatgttgtaaaaatttagtagaaatgtatac 288  Q
    |||| ||||||| ||  ||| ||||||||||||||||||| |||  ||||||| |||| |||||||| ||||||||||||| || | || | |||||||     
T  29324043 acaatgatacttctactatacttcacaaatacgtatcctaaaaaaagatgaagagtaaaaaagtgaggcaatgttgtaaaacttcaataaagatgtatat 29324142  T
Q  289 gaatcaattttagatatgaatctgtaaaattgtttctcgatgaactacttaaaatta 345  Q
     | ||||||||||||||| |||  || |||||||||||||||||| |||||||||||    
T  29324143 cattcaattttagatatgcatcaatataattgtttctcgatgaaccacttaaaatta 29324199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 365 - 473
Target Start/End: Original strand, 36505017 - 36505127
Alignment:
Q  365 taattagtgcttattttcttcaagtgctttacatat--ataagttttagtataaattttttgttaacgtatcttagccgtatcgtatcctaaattttaaa 462  Q
    |||||| || ||||||||||| |||  |||||||||  ||||||||||||||||||||||||||||| |||||||| |||||||||||||| ||||| ||    
T  36505017 taattaatgtttattttcttcgagtattttacatatatataagttttagtataaattttttgttaacatatcttagacgtatcgtatcctatattttgaa 36505116  T
Q  463 aattttgcgta 473  Q
    || || |||||    
T  36505117 aaattcgcgta 36505127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 167 - 345
Target Start/End: Original strand, 20619202 - 20619379
Alignment:
Q  167 gtatagaatattccacagatacaacaaggatacttataagatatttcacaaatacgtatcctagaaatgatgaagggtaagaaagtgagacaatgttgta 266  Q
    |||||| ||| |||| ||||||| |||||||| |||||||||| |||| | ||| |||| |||||||  ||  ||||||| ||||| | ||||||||||     
T  20619202 gtataggatactccatagataca-caaggatatttataagatacttcaaatatatgtattctagaaaatatatagggtaaaaaagtcaaacaatgttgtg 20619300  T
Q  267 aaaatttagtagaaatgtatacgaatcaattttagatatgaatctgtaaaattgtttctcgatgaactacttaaaatta 345  Q
    |||||| ||| |||||||||| || ||||||||||||||| ||  ||| |||| ||| ||||| ||| |||||||||||    
T  20619301 aaaattcagtggaaatgtatatgattcaattttagatatgcataagtataattatttttcgatcaaccacttaaaatta 20619379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 365 - 464
Target Start/End: Complemental strand, 38489654 - 38489559
Alignment:
Q  365 taattagtgcttattttcttcaagtgctttacatatataagttttagtataaattttttgttaacgtatcttagccgtatcgtatcctaaattttaaaaa 464  Q
    |||||| || |||||||||||||||  ||    |||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||| ||||    
T  38489654 taattaatgtttattttcttcaagtattt----tatataagttttagtataaattttttgttaacgtattttaaccgtatcgtatcctaaattttgaaaa 38489559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 399 - 501
Target Start/End: Original strand, 21854054 - 21854156
Alignment:
Q  399 atataagttttagtataaattttttgttaacgtatcttagccgtatcgtatcctaaattttaaaaattttgcgtattcacgtatctgtatcgtatcgtac 498  Q
    |||||| ||||| ||||||| |||||||| |||||||||||| |||| ||||||||||||||||| ||| | |||| | |||| | ||||||||||||||    
T  21854054 atataaattttactataaatattttgttatcgtatcttagccatatcatatcctaaattttaaaattttcgtgtatccgcgtacccgtatcgtatcgtac 21854153  T
Q  499 ccg 501  Q
    |||    
T  21854154 ccg 21854156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 35 - 228
Target Start/End: Original strand, 43471583 - 43471777
Alignment:
Q  35 ctatgaagtccgaatactgcaaaatggaaacgtacccgtatcgaataccgatacttcatggatacttgcggatacgtacccacgaagtatcataattaat 134  Q
    |||||||  ||| ||||| ||||||||| || || |||||||| |||||||||||   ||||||||  | |||||||||||||| ||||||| |||||||    
T  43471583 ctatgaatcccggatactccaaaatggagacatatccgtatcggataccgatactcagtggatactctcagatacgtacccacggagtatcagaattaat 43471682  T
Q  135 tattttaaatttta--atcttttttatctgatacgtatagaatattccacagatacaacaaggatacttataagatatttcacaaatacgtatcct 228  Q
    |||||||| ||| |  || | ||||||| ||||| ||||  ||| || |||||||| |||  ||||||||||||||| |||| | | |||||||||    
T  43471683 tattttaattttaaatatatattttatcggatacttataagatactcgacagatac-acacagatacttataagatacttcatagagacgtatcct 43471777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 235 - 355
Target Start/End: Original strand, 45472607 - 45472727
Alignment:
Q  235 gatgaagggtaagaaagtgagacaatgttgtaaaaatttagtagaaatgtatacgaatcaattttagatatgaatctgtaaaattgtttctcgatgaact 334  Q
    ||||||| |||| ||||| ||||||||||||||| ||| | |||| ||||||| || ||||||||||||||| |||  || |||||||||||||||||      
T  45472607 gatgaagagtaaaaaagttagacaatgttgtaaacattcaatagagatgtatatgattcaattttagatatgcatcactagaattgtttctcgatgaatc 45472706  T
Q  335 acttaaaattacacttattgt 355  Q
    || |||||||| |||| ||||    
T  45472707 acgtaaaattatacttcttgt 45472727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 399 - 494
Target Start/End: Original strand, 21858549 - 21858644
Alignment:
Q  399 atataagttttagtataaattttttgttaacgtatcttagccgtatcgtatcctaaattttaaaaattttgcgtattcacgtatctgtatcgtatc 494  Q
    |||||| ||||||||||||| |||||||||||||||||| | |||||||||||| |||||||||||| | | |||| | |||| | ||||||||||    
T  21858549 atataaattttagtataaatattttgttaacgtatcttaactgtatcgtatcctgaattttaaaaatatcgtgtatccgcgtacccgtatcgtatc 21858644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 235 - 355
Target Start/End: Original strand, 32835245 - 32835366
Alignment:
Q  235 gatgaagggtaagaaagtgagacaatgttgtaaaaatttagtagaaatgtatacga--atcaattttagatatgaatctgtaaaattgtttctcgatgaa 332  Q
    |||||||||||| ||||||||||||||||||||||||| ||| || ||||||| ||   ||||||||||||||| ||   || ||||||| ||| |||||    
T  32835245 gatgaagggtaa-aaagtgagacaatgttgtaaaaattcagttgagatgtatatgattttcaattttagatatgcattaatagaattgttgctcaatgaa 32835343  T
Q  333 ctacttaaaattacacttattgt 355  Q
    | ||||||||||| |||||||||    
T  32835344 ccacttaaaattatacttattgt 32835366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 36 - 246
Target Start/End: Complemental strand, 39615352 - 39615142
Alignment:
Q  36 tatgaagtccgaatactgcaaaatggaaacgtacccgtatcgaataccgatacttcatggatacttgcggatacgtacccacgaagtatcataattaatt 135  Q
    |||||||| || ||||| ||||||| | | |||| ||||||  ||||||||| || | ||||| | || |||||| |||||| ||||||   ||||||||    
T  39615352 tatgaagttcggatactccaaaatgaagatgtactcgtatcagataccgatattttacggatattcgcagatacgcacccacaaagtatttgaattaatt 39615253  T
Q  136 attttaaatttta-atcttttttatctgatacgtatagaatattccacagatacaacaaggatacttataagatatttcacaaatacgtatcctagaaat 234  Q
    ||||||| ||||| |    ||||||   |||| | ||  ||| |||||||||||| ||| ||||||||||||||| |||||||||||||||| ||||||     
T  39615252 attttaatttttataaacattttatggaatacttgtaagatactccacagataca-caatgatacttataagatacttcacaaatacgtatcttagaaaa 39615154  T
Q  235 gatgaagggtaa 246  Q
    ||||||||||||    
T  39615153 gatgaagggtaa 39615142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 399 - 529
Target Start/End: Complemental strand, 52695351 - 52695221
Alignment:
Q  399 atataagttttagtataaattttttgttaacgtatcttagccgtatcgtatcctaaattttaaaaattttgcgtattcacgtatctgtatcgtatcgtac 498  Q
    |||| ||||||||||| ||  |||||| ||||||| ||||| |||||||||| ||||||| ||| | ||||||||||  ||||   ||||||||||||||    
T  52695351 atatgagttttagtatcaaaattttgtcaacgtattttagctgtatcgtatcttaaatttaaaataatttgcgtatttgcgtactcgtatcgtatcgtac 52695252  T
Q  499 ccgcacccgtatctgtatctgggcttcatag 529  Q
    ||||||  ||||| ||| | |||||||||||    
T  52695251 ccgcacttgtatccgtacccgggcttcatag 52695221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 399 - 476
Target Start/End: Complemental strand, 12176528 - 12176452
Alignment:
Q  399 atataagttttagtataaattttttgttaacgtatcttagccgtatcgtatcctaaattttaaaaattttgcgtattc 476  Q
    |||||| |||||||| ||||  ||||||||||||||||| |||||||||||||| |||||||||||||| ||||||||    
T  12176528 atataaattttagtacaaataatttgttaacgtatcttaaccgtatcgtatcct-aattttaaaaatttcgcgtattc 12176452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 190 - 341
Target Start/End: Original strand, 35296386 - 35296536
Alignment:
Q  190 acaaggatacttataagatatttcacaaatac--gtatcctagaaatgatgaagggtaagaaagtgagacaatgttgtaaaaatttagtagaaatgtata 287  Q
    |||| ||||||||||||||| |||  | ||||  ||||| |||||| ||||||| |||| ||||||||||||| | |   ||||| |||||| || ||||    
T  35296386 acaatgatacttataagatacttcctagatacatgtatcatagaaaagatgaagtgtaaaaaagtgagacaatatag---aaattcagtagagatatata 35296482  T
Q  288 cgaatcaattttagatatgaatctgtaaaattgtttctcgatgaactacttaaa 341  Q
    ||| ||||||||||||||| ||  ||| |||||||||||||||||  |||||||    
T  35296483 cgattcaattttagatatgcataagtataattgtttctcgatgaatcacttaaa 35296536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 372 - 505
Target Start/End: Complemental strand, 51240752 - 51240618
Alignment:
Q  372 tgcttattttcttcaagtgctttacatatata--agttttagtataaattttttgttaacgtatcttagccgtatcgtatcctaaattttaaaaattttg 469  Q
    |||||||| |||||||||  |||||| | |||  ||||||||||||||  |||||| || |||||||| ||||||||||||||||| |||||||| || |    
T  51240752 tgcttattatcttcaagtattttacacacatatgagttttagtataaaaattttgtcaatgtatcttaaccgtatcgtatcctaaa-tttaaaaagttcg 51240654  T
Q  470 cgtattcacgtatctgtatcgtatcgtacccgcacc 505  Q
    ||||| | |||| |  |||| |||||||||||||||    
T  51240653 cgtatccgcgtacccatatcatatcgtacccgcacc 51240618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 406 - 465
Target Start/End: Original strand, 21842915 - 21842974
Alignment:
Q  406 ttttagtataaattttttgttaacgtatcttagccgtatcgtatcctaaattttaaaaat 465  Q
    ||||||||||||| |||||||||||||||||||  |||||||||||| ||||||||||||    
T  21842915 ttttagtataaatattttgttaacgtatcttagttgtatcgtatcctgaattttaaaaat 21842974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 399 - 474
Target Start/End: Complemental strand, 36171981 - 36171907
Alignment:
Q  399 atataagttttagtataaattttttgttaacgtatcttagccgtatcgtatcctaaattttaaaaattttgcgtat 474  Q
    |||||| | |||||||||||  |||||||| ||||||||||| ||||||||||| |||||||||||||||||||||    
T  36171981 atataaatattagtataaataatttgttaaagtatcttagccatatcgtatcct-aattttaaaaattttgcgtat 36171907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 71 - 142
Target Start/End: Complemental strand, 36172218 - 36172147
Alignment:
Q  71 cgtatcgaataccgatacttcatggatacttgcggatacgtacccacgaagtatcataattaattattttaa 142  Q
    ||||||| ||||||||||| | ||||||||  |||||||||||||||| ||||||| |||||||||||||||    
T  36172218 cgtatcggataccgatactccgtggatactctcggatacgtacccacggagtatcagaattaattattttaa 36172147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 211 - 344
Target Start/End: Original strand, 36504805 - 36504937
Alignment:
Q  211 ttcacaaatacgtatcctagaaat-gatgaagggtaagaaagtgagacaatgttgtaaaaatttagtagaaatgtatacgaatcaattttagatatgaat 309  Q
    |||||| ||||||||||||||||  ||||||| ||||  ||||||||||||||||||| | || ||||| | |||||| |  ||||||||||||||| ||    
T  36504805 ttcacagatacgtatcctagaaaaagatgaagagtaaacaagtgagacaatgttgtaaca-ttcagtagga-tgtatatggttcaattttagatatgcat 36504902  T
Q  310 ctgtaaaattgtttctcgatgaactacttaaaatt 344  Q
    |  || |||||||||||||||||| | ||||||||    
T  36504903 cactagaattgtttctcgatgaaccaattaaaatt 36504937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 399 - 464
Target Start/End: Original strand, 2111721 - 2111785
Alignment:
Q  399 atataagttttagtataaattttttgttaacgtatcttagccgtatcgtatcctaaattttaaaaa 464  Q
    |||||| |||| |||||||| ||||||||| ||||||||||||||||||||||| |||||||||||    
T  2111721 atataaattttggtataaatattttgttaatgtatcttagccgtatcgtatcct-aattttaaaaa 2111785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 355 - 437
Target Start/End: Complemental strand, 20178846 - 20178762
Alignment:
Q  355 taatgaagggtaattagtgcttattttcttcaagtgctttacatatata--agttttagtataaattttttgttaacgtatctta 437  Q
    ||||||| |||||| | |||||||||| |||||||  ||||||||||||  ||||||| ||||||||||||||| ||||||||||    
T  20178846 taatgaatggtaatcaatgcttatttttttcaagtattttacatatatataagttttaatataaattttttgttgacgtatctta 20178762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 419 - 459
Target Start/End: Complemental strand, 17063859 - 17063819
Alignment:
Q  419 tttttgttaacgtatcttagccgtatcgtatcctaaatttt 459  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  17063859 tttttgttaacgtatcttagccgtatcgtatcctaaatttt 17063819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 355 - 458
Target Start/End: Complemental strand, 20369071 - 20368965
Alignment:
Q  355 taatgaagggtaattagtgcttattttcttcaagtgctttacatatataagttttagtataaa---ttttttgttaacgtatcttagccgtatcgtatcc 451  Q
    |||| ||| ||||| | ||||||||||||||||||  |||| | | |||||||||||||||||   ||| ||||||||| |||||||||||||| ||||     
T  20369071 taataaagagtaatcaatgcttattttcttcaagtattttatacacataagttttagtataaaatttttgttgttaacgaatcttagccgtatcatatct 20368972  T
Q  452 taaattt 458  Q
    |||||||    
T  20368971 taaattt 20368965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 399 - 467
Target Start/End: Original strand, 35433585 - 35433652
Alignment:
Q  399 atataagttttagtataaattttttgttaacgtatcttagccgtatcgtatcctaaattttaaaaattt 467  Q
    |||||| |||||||||||||  |||||||||||||||||  ||||||||||||| ||||||||||||||    
T  35433585 atataaattttagtataaataatttgttaacgtatcttaaacgtatcgtatcct-aattttaaaaattt 35433652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 365 - 501
Target Start/End: Original strand, 29324413 - 29324551
Alignment:
Q  365 taattagtgcttattttcttcaagtgctttacat--atataagttttagtataaattttttgttaacgtatcttagccgtatcgtatcctaaattttaaa 462  Q
    |||||| || ||||||| |||||||  |||||||  |||||||||| | ||| |||||||||| || ||||| || ||| |||||||||||||||| |||    
T  29324413 taattaatgtttatttttttcaagtattttacatgcatataagtttcattatgaattttttgtcaatgtatcataaccgaatcgtatcctaaatttaaaa 29324512  T
Q  463 aattttgcgtattcacgtatctgtatcgtatcgtacccg 501  Q
     | || |||||| |  ||| | |||||||||||||||||    
T  29324513 taattcgcgtatccgtgtacccgtatcgtatcgtacccg 29324551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 548 - 595
Target Start/End: Complemental strand, 52203528 - 52203481
Alignment:
Q  548 aaatccttattttctcttattttcttctttccgttattttgcttatgg 595  Q
    ||||||| ||||||||||| ||||||||||||||||||||||||||||    
T  52203528 aaatcctaattttctcttactttcttctttccgttattttgcttatgg 52203481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 399 - 473
Target Start/End: Original strand, 16343248 - 16343321
Alignment:
Q  399 atataagttttagtataaattttttgttaacgtatcttagccgtatcgtatcctaaattttaaaaattttgcgta 473  Q
    |||||| |||||||||||||  |||||| |||||||||| |||||||||||||| ||||| |||||||| |||||    
T  16343248 atataaattttagtataaataatttgttgacgtatcttaaccgtatcgtatcct-aatttaaaaaatttcgcgta 16343321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 406 - 468
Target Start/End: Original strand, 47014725 - 47014787
Alignment:
Q  406 ttttagtataaattttttgttaacgtatcttagccgtatcgtatcctaaattttaaaaatttt 468  Q
    ||||||| ||||| |||||||||||||| | | |||||||||||||| |||||||||||||||    
T  47014725 ttttagtgtaaatattttgttaacgtatttgatccgtatcgtatccttaattttaaaaatttt 47014787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 399 - 464
Target Start/End: Original strand, 2119214 - 2119279
Alignment:
Q  399 atataagttttagtataaattttttgttaacgtatcttagccgtatcgtatcctaaattttaaaaa 464  Q
    ||||||| |||||||||||||||||||| | ||||||||   ||||||||||||||||||| ||||    
T  2119214 atataagctttagtataaattttttgttgatgtatcttaattgtatcgtatcctaaatttttaaaa 2119279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 378 - 494
Target Start/End: Complemental strand, 31489292 - 31489175
Alignment:
Q  378 ttttcttcaagtgctttacat--atataagttttagtataaattttttgttaacgtatcttagccgtatcgtatcctaaattttaaaaattttgcgtatt 475  Q
    |||| |||||||| |||||||  |||| | |||||||||||||  | ||||||||| | |||||||||| ||||||  |||||| ||||||| || |||     
T  31489292 tttttttcaagtgttttacatgcatattaattttagtataaataatgtgttaacgtgtattagccgtattgtatccagaatttt-aaaatttcgcatatc 31489194  T
Q  476 cacgtatctgtatcgtatc 494  Q
    |||||||| ||||||||||    
T  31489193 cacgtatccgtatcgtatc 31489175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 399 - 443
Target Start/End: Original strand, 24121416 - 24121460
Alignment:
Q  399 atataagttttagtataaattttttgttaacgtatcttagccgta 443  Q
    |||||| ||||||||||||| |||||||||||||| |||||||||    
T  24121416 atataaattttagtataaatattttgttaacgtatattagccgta 24121460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 49 - 149
Target Start/End: Original strand, 36504653 - 36504753
Alignment:
Q  49 tactgcaaaatggaaacgtacccgtatcgaataccgatacttcatggatacttgcggatacgtacccacgaagtatcataattaattattttaaatttta 148  Q
    |||| ||||| ||| ||||||||||||| |||| |||||||  |  |||||| || ||||   ||||||||||||||| |||||||||||| || |||||    
T  36504653 tactccaaaacggagacgtacccgtatcaaatatcgatactcaacagatactcgcagatattcacccacgaagtatcaaaattaattatttaaattttta 36504752  T
Q  149 a 149  Q
    |    
T  36504753 a 36504753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 399 - 509
Target Start/End: Original strand, 12736808 - 12736915
Alignment:
Q  399 atataagttttagtataaattttttgttaacgtatcttagccgtatcgtatcctaaattttaaaaattttgcgtattcacgtatctgtatcgtatcgtac 498  Q
    ||||||||||||||||||| |||| |||| | ||||||||||||||||||  ||||| ||| | ||  ||| |||| |||||| | ||||| |||| |||    
T  12736808 atataagttttagtataaaatttt-gttaccatatcttagccgtatcgtactctaaaattttagaa--ttgtgtatccacgtacccgtatcatatcatac 12736904  T
Q  499 ccgcacccgta 509  Q
    |||||| ||||    
T  12736905 ccgcactcgta 12736915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 79 - 142
Target Start/End: Original strand, 24120913 - 24120976
Alignment:
Q  79 ataccgatacttcatggatacttgcggatacgtacccacgaagtatcataattaattattttaa 142  Q
    |||| |||||| || ||||||| ||||||||||||||||  ||||||  |||||||||||||||    
T  24120913 atactgatactccacggatactcgcggatacgtacccacagagtatcgaaattaattattttaa 24120976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 355 - 423
Target Start/End: Original strand, 35296662 - 35296732
Alignment:
Q  355 taatgaagggtaattagtgcttattttcttcaagtgctttacat--atataagttttagtataaatttttt 423  Q
    |||||||||||| | | ||||||||||||||||||  |||||||  || ||| ||||||||||||||||||    
T  35296662 taatgaagggtagtcaatgcttattttcttcaagtattttacatacatgtaaattttagtataaatttttt 35296732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 71 - 157
Target Start/End: Original strand, 45472455 - 45472539
Alignment:
Q  71 cgtatcgaataccgatacttcatggatacttgcggatacgtacccacgaagtatcataattaattattttaaattttaatctttttt 157  Q
    ||||||| ||||||||||| || ||||||| || |||||| | |||||||||||   ||||||||| ||||||||||||| ||||||    
T  45472455 cgtatcggataccgatactccacggatactcgc-gatacgcatccacgaagtattgaaattaatta-tttaaattttaatttttttt 45472539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 421 - 463
Target Start/End: Complemental strand, 49508087 - 49508045
Alignment:
Q  421 tttgttaacgtatcttagccgtatcgtatcctaaattttaaaa 463  Q
    |||||||| ||||||||| |||||||||| |||||||||||||    
T  49508087 tttgttaaagtatcttagacgtatcgtattctaaattttaaaa 49508045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 196 - 342
Target Start/End: Complemental strand, 1341829 - 1341681
Alignment:
Q  196 atacttataagatatttcacaaatacgtatcct--agaaatgatgaagggtaagaaagtgagacaatgttgtaaaaatttagtagaaatgtatacgaatc 293  Q
    ||||||||| |||| |||||||| ||||||| |  |||||  ||||||||||| ||||| | |   |||||| |||||| | |||| ||| ||| || ||    
T  1341829 atacttatatgatacttcacaaagacgtatcttggagaaaaaatgaagggtaaaaaagttatattgtgttgtgaaaattcaatagagatgcatatgattc 1341730  T
Q  294 aattttagatatgaatctgtaaaattgtttctcgatgaactacttaaaa 342  Q
    | ||| |||||||||||  || |||||||| ||||| ||||| ||||||    
T  1341729 attttaagatatgaatcattataattgtttttcgattaactaattaaaa 1341681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 418 - 483
Target Start/End: Complemental strand, 10224234 - 10224169
Alignment:
Q  418 ttttttgttaacgtatcttagccgtatcgtatcctaaattttaaaaattttgcgtattcacgtatc 483  Q
    |||||| ||||||||||  |||||||||||||| | | |||||||| |||| |||||| |||||||    
T  10224234 ttttttattaacgtatcccagccgtatcgtatcttgatttttaaaatttttccgtattgacgtatc 10224169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 94 - 142
Target Start/End: Complemental strand, 12176743 - 12176695
Alignment:
Q  94 ggatacttgcggatacgtacccacgaagtatcataattaattattttaa 142  Q
    |||||||  |||||||||||||||| ||||||  |||||||||||||||    
T  12176743 ggatactctcggatacgtacccacggagtatcggaattaattattttaa 12176695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 94 - 142
Target Start/End: Original strand, 16343032 - 16343080
Alignment:
Q  94 ggatacttgcggatacgtacccacgaagtatcataattaattattttaa 142  Q
    |||||||  |||||||||||||||  |||||||||||||||| ||||||    
T  16343032 ggatactctcggatacgtacccacagagtatcataattaattcttttaa 16343080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 412 - 468
Target Start/End: Complemental strand, 22610367 - 22610311
Alignment:
Q  412 tataaattttttgttaacgtatcttagccgtatcgtatcctaaattttaaaaatttt 468  Q
    ||||| |||||| ||||||||||| |||||||||||||| | | |||| ||||||||    
T  22610367 tataattttttttttaacgtatctcagccgtatcgtatcttgatttttgaaaatttt 22610311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 356 - 429
Target Start/End: Complemental strand, 39614859 - 39614784
Alignment:
Q  356 aatgaagggtaattagtgcttattttcttcaagtgctttacat--atataagttttagtataaattttttgttaac 429  Q
    ||||||| ||||| | |||||||||||||||| |  |||||||  |||||| ||||| ||||| ||||||||||||    
T  39614859 aatgaagagtaatcaatgcttattttcttcaaatattttacatacatataaattttaatataatttttttgttaac 39614784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 125; Significance: 4e-64; HSPs: 42)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 125; E-Value: 4e-64
Query Start/End: Original strand, 35 - 355
Target Start/End: Complemental strand, 45648540 - 45648218
Alignment:
Q  35 ctatgaagtccgaatactgcaaaatggaaacgtacccgtatcgaataccgatacttcatggatacttgcggatacgtacccacgaagtatcataattaat 134  Q
    |||||||| ||||||||| ||||||||| |||||||||||||| |||| || ||| || ||||||| ||||||||||||||||||||||||  |||||||    
T  45648540 ctatgaagcccgaatactccaaaatggagacgtacccgtatcggatactgaaactccacggatactcgcggatacgtacccacgaagtatcggaattaat 45648441  T
Q  135 tattttaaattttaatc--ttttttatctgatacgtatagaatattccacagatacaacaaggatacttataagatatttcacaaatacgtatcctagaa 232  Q
    |||||||| |||||||   | ||||||| | ||| |||   ||| ||||||||||||  |||||||||| ||||||| |||||| |||||||||||||||    
T  45648440 tattttaatttttaataaatattttatcgggtacttatgtgatactccacagatacat-aaggatacttctaagatacttcacagatacgtatcctagaa 45648342  T
Q  233 at-gatgaagggtaagaaagtgagacaatgttgtaaaaatttagtagaaatgtatacgaatcaattttagatatgaatctgtaaaattgtttctcgatga 331  Q
    |  ||||| | |||| ||||||||||||||||||||||||| | || | ||||||| || ||||||||||||||| |||  || |||||||||||| |||    
T  45648341 aaagatgaggagtaaaaaagtgagacaatgttgtaaaaattcattatagatgtatatgattcaattttagatatgcatcaatagaattgtttctcggtga 45648242  T
Q  332 actacttaaaattacacttattgt 355  Q
    || ||||||||||| |||| ||||    
T  45648241 accacttaaaattatacttcttgt 45648218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 113; E-Value: 6e-57
Query Start/End: Original strand, 35 - 355
Target Start/End: Complemental strand, 47844083 - 47843761
Alignment:
Q  35 ctatgaagtccgaatactgcaaaatggaaacgtacccgtatcgaataccgatacttcatggatacttgcggatacgtacccacgaagtatcataattaat 134  Q
    |||||||| ||| ||||| |||||  || |||||||||||||| ||||||||||| || ||||||| ||||||||||||||||||||||||  |||||||    
T  47844083 ctatgaagcccggatactacaaaacagagacgtacccgtatcggataccgatactccacggatactcgcggatacgtacccacgaagtatctcaattaat 47843984  T
Q  135 tattttaaatttt--aatcttttttatctgatacgtatagaatattccacagatacaacaaggatacttataagatatttcacaaatacgtatcctagaa 232  Q
    |||||| | ||||  ||  | ||||||| ||||| ||||  ||| ||| |||||| | ||||||||||| ||||||| |||||  || ||||||||||||    
T  47843983 tattttgattttttaaaaatattttatcggatacttatatgatactccgcagataga-caaggatacttctaagatacttcacgtatgcgtatcctagaa 47843885  T
Q  233 at-gatgaagggtaagaaagtgagacaatgttgtaaaaatttagtagaaatgtatacgaatcaattttagatatgaatctgtaaaattgtttctcgatga 331  Q
    |  |||||||||||| ||||| ||||||||||||||||| | |||||| ||||||| || ||||||||||||||| |||  ||||||||||||  || ||    
T  47843884 aaagatgaagggtaaaaaagttagacaatgttgtaaaaactcagtagagatgtatatgattcaattttagatatgcatcaataaaattgtttcctgacga 47843785  T
Q  332 actacttaaaattacacttattgt 355  Q
    || ||||||||||| |||| ||||    
T  47843784 accacttaaaattatacttcttgt 47843761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 86; E-Value: 8e-41
Query Start/End: Original strand, 79 - 355
Target Start/End: Complemental strand, 42040730 - 42040451
Alignment:
Q  79 ataccgatacttcatggatacttgcggatacgtacccacgaagtatcataattaattattttaaattttaatc--ttttttatctgatacgtatagaata 176  Q
    ||||||||||| || ||||||||| |||||||||  |||||||||||||||||  ||||||||| |||||||   | ||||||| ||||| ||| | |||    
T  42040730 ataccgatactccacggatacttgtggatacgtattcacgaagtatcataattggttattttaatttttaataaatattttatcggatacttatgggata 42040631  T
Q  177 ttccacagatacaacaaggatacttataagatatttcacaaatacgtatcctagaaat-gatgaagggtaagaaa-gtgagacaatgttgtaaaaattta 274  Q
     || ||||||||| ||||||||||| ||||||| ||| || | |||||| |||||||  ||||||| |||| ||| |||||||||||||||||||||| |    
T  42040630 ctctacagataca-caaggatacttctaagatacttcgcagacacgtattctagaaaaagatgaagagtaaaaaaagtgagacaatgttgtaaaaattca 42040532  T
Q  275 gtagaaatgtatacgaatcaattttagatatgaatctgtaaaattgtttctcgatgaactacttaaaattacacttattgt 355  Q
     || | ||||||| || ||||||||||||||| |||  || |||||| ||||||||||  ||||||||||| |||| ||||    
T  42040531 ttatagatgtatatgactcaattttagatatgcatcaatagaattgtctctcgatgaaacacttaaaattatacttcttgt 42040451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 110 - 341
Target Start/End: Original strand, 34471642 - 34471874
Alignment:
Q  110 gtacccacgaagtatcataattaattattttaaattttaatc--ttttttatctgatacgtatagaatattccacagatacaacaaggatacttataaga 207  Q
    ||||||||||||||||| ||||||||||||||| ||| ||    | ||||||||||||| ||||| ||| | || ||||||| |||| ||||||||||||    
T  34471642 gtacccacgaagtatcagaattaattattttaattttaaaaaaatattttatctgatacttataggatacttcatagataca-caagaatacttataaga 34471740  T
Q  208 tatttcacaaatacgtatcctagaaatgatgaagggtaagaaagtgagacaatgttgtaaaaatttagtagaaatgtatacgaatcaattttagatatga 307  Q
    || |||||| ||||||||||||| ||  |||||| |||| ||||||| ||||||||||| ||||| |||||| |||||||  | |||||||||||||||     
T  34471741 tacttcacatatacgtatcctaggaaatatgaagtgtaaaaaagtgacacaatgttgtagaaattcagtagagatgtatataattcaattttagatatgc 34471840  T
Q  308 atctgtaaaattgtttctcgatgaactacttaaa 341  Q
    |||| || || ||||||| ||||| | |||||||    
T  34471841 atctctagaactgtttcttgatgagccacttaaa 34471874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 79 - 355
Target Start/End: Original strand, 48152880 - 48153159
Alignment:
Q  79 ataccgatacttcatggatacttgcggatacgtacccacgaagtatcataattaattattttaaattttaatctt---ttttatctgatacgtatagaat 175  Q
    |||| |||||| || ||||||| ||||| ||| ||||||||||||||| |||||||||||| || ||||||       ||| | | ||||| ||||  ||    
T  48152880 atactgatactccacggatactcgcggacacgcacccacgaagtatcagaattaattatttaaatttttaaaaaaacatttaaacggatacttatacgat 48152979  T
Q  176 attccacagatacaacaaggatacttataagatatttcacaaatacgtatcctagaaat-gatgaagggtaagaaagtgagacaatgttgtaaaaattta 274  Q
    | ||  |||||||| |||||||||||||||||||||||||| ||||||||||||||||  |||||||  ||| ||||||||| ||||||||||| |||      
T  48152980 actctgcagataca-caaggatacttataagatatttcacatatacgtatcctagaaaaagatgaagaataaaaaagtgagaaaatgttgtaaacattcc 48153078  T
Q  275 gtagaaatgtatacgaatcaattttagatatgaatctgtaaaattgtttctcgatgaactacttaaaattacacttattgt 355  Q
    ||||| |||||||||| ||||||||||| ||| |||  || |||||||||||||||||| |||| |||||| |||| ||||    
T  48153079 gtagagatgtatacgattcaattttagacatgcatcactagaattgtttctcgatgaaccacttgaaattatacttcttgt 48153159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 81; E-Value: 8e-38
Query Start/End: Original strand, 48 - 363
Target Start/End: Complemental strand, 3751799 - 3751481
Alignment:
Q  48 atactgcaaaatggaaacgtacccgtatcgaataccgatacttcatggatacttgcggatacgtacccacgaagtatcataattaattattttaaatttt 147  Q
    ||||| ||||| ||| |||||||||||||| ||| ||||||| || ||||| | | |||||||||||||||| |||||  | |||||||||| || | ||    
T  3751799 atactccaaaacggagacgtacccgtatcggatatcgatactccacggatattcgtggatacgtacccacgacgtatcggagttaattatttcaattgtt 3751700  T
Q  148 aatcttt--tttatctgatacgtatagaatattccacagatacaacaaggatacttataagatatttcacaaatacgtatcctagaaatgatgaagggta 245  Q
    ||   ||  |||||| ||||| ||||   || | || ||||||| |||  |||||| ||||||| |||||| |||| |||| || ||| |||| ||||||    
T  3751699 aaaaattattttatcagatacttatatgttactgcagagataca-caaaaatacttttaagatacttcacatatacatatcttaaaaaagatgcagggta 3751601  T
Q  246 agaaa-gtgagacaatgttgtaaaaatttagtagaaatgtatacgaatcaattttagatatgaatctgtaaaattgtttctcgatgaactacttaaaatt 344  Q
    | ||| ||||||||||||||| |||| |||||||| ||||||| || ||||||||||||||| |||  ||||||||||||||||||||  ||||||||||    
T  3751600 aaaaaagtgagacaatgttgtgaaaacttagtagagatgtatatgattcaattttagatatgcatcaataaaattgtttctcgatgaatcacttaaaatt 3751501  T
Q  345 acacttattgt-aatgaagg 363  Q
    | |||| |||| ||||||||    
T  3751500 atacttcttgtgaatgaagg 3751481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 399 - 501
Target Start/End: Original strand, 40837306 - 40837408
Alignment:
Q  399 atataagttttagtataaattttttgttaacgtatcttagccgtatcgtatcctaaattttaaaaattttgcgtattcacgtatctgtatcgtatcgtac 498  Q
    |||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||| ||||| ||||  |||| || |||| ||||||||||||||    
T  40837306 atataagttttagtataaattttttgttaatgtatcttaaccgtatcgtatcctaaatttaaaaaaatttgtatatttacatatccgtatcgtatcgtac 40837405  T
Q  499 ccg 501  Q
    |||    
T  40837406 ccg 40837408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 196 - 350
Target Start/End: Original strand, 40836356 - 40836511
Alignment:
Q  196 atacttataagatatttcacaaatacgtatcctagaaat-gatgaagggtaagaaagtgagacaatgttgtaaaaatttagtagaaatgtatacgaatca 294  Q
    ||||||||||| || |||||| ||||||||| ||||||  ||||| | |||| |||||||||||| |||||||| || ||||||| || |||| || |||    
T  40836356 atacttataaggtacttcacagatacgtatcatagaaaaagatgaggagtaaaaaagtgagacaacgttgtaaacatctagtagagatctatatgattca 40836455  T
Q  295 attttagatatgaatctgtaaaattgtttctcgatgaactacttaaaattacactt 350  Q
    |||||||||||| |||  || |||||||||||||||||| ||||||||||| ||||    
T  40836456 attttagatatgcatcactagaattgtttctcgatgaaccacttaaaattatactt 40836511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 196 - 345
Target Start/End: Complemental strand, 43495908 - 43495758
Alignment:
Q  196 atacttataagatatttcacaaatacgtatcctagaaat-gatgaagggtaagaaagtgagacaatgttgtaaaaatttagtagaaatgtatacgaatca 294  Q
    |||||||||||||| |||||| ||| |||||||| |||  | ||||| |||| ||||||||||||| ||||||| ||  |||||| || |||| || |||    
T  43495908 atacttataagatacttcacagatatgtatcctataaaaaggtgaagagtaaaaaagtgagacaatcttgtaaacatccagtagagatatatatgattca 43495809  T
Q  295 attttagatatgaatctgtaaaattgtttctcgatgaactacttaaaatta 345  Q
    |||||||||||| |||  ||||||||||||||||||||| |||||||||||    
T  43495808 attttagatatgcatcactaaaattgtttctcgatgaaccacttaaaatta 43495758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 48 - 355
Target Start/End: Original strand, 45491977 - 45492290
Alignment:
Q  48 atactgcaaaatggaaacgtacccgtatcgaataccgatacttcatggatacttgcggatacgtacccacgaagtatcataattaattattttaaatttt 147  Q
    ||||| ||||| ||| |||||||||||||| ||||| ||||| || ||||| | |||||||| ||| || ||||||||  ||||||||||||||| ||      
T  45491977 atacttcaaaacggagacgtacccgtatcggataccaatactccacggatattcgcggatacatactcatgaagtatcggaattaattattttaatttaa 45492076  T
Q  148 aa--tcttttttatctgatacgtatagaatattccacagatacaacaaggatacttataagatatttcacaaatacgtatcctagaaat-gatgaaggg- 243  Q
    ||  | | | ||||| ||||| ||||  ||| |||| || |||| ||| ||||||||||||||| ||| || ||| ||||||||||||  |||||||||     
T  45492077 aaaatatatattatcggatacttatatgatactccataggtaca-caatgatacttataagatacttcgcatatatgtatcctagaaaaagatgaaggga 45492175  T
Q  244 ---taagaaagtgagacaatgttgtaaaaatttagtagaaatgtatacgaatcaattttagatatgaatctgtaaaattgtttctcgatgaactacttaa 340  Q
       ||| ||||||||||||||||||||||||| || ||| | ||||| || ||||||||||||||| ||  ||  ||||||||| |  ||||  ||||||    
T  45492176 aattaaaaaagtgagacaatgttgtaaaaattcaggagagacgtatatgattcaattttagatatgcattagtcgaattgtttcacagtgaatcacttaa 45492275  T
Q  341 aattacacttattgt 355  Q
    ||||| |||| ||||    
T  45492276 aattatacttcttgt 45492290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 355 - 529
Target Start/End: Complemental strand, 42040258 - 42040084
Alignment:
Q  355 taatgaagggtaattagtgcttattttcttcaagtgctttacata--tataagttttagtataaattttttgttaacgtatcttagccgtatcgtatcct 452  Q
    |||||||| ||||| | || | |||||||||||||  ||||||||  ||||||||||| ||||||||||| ||||||||||| || ||||||||||||||    
T  42040258 taatgaagagtaatcaatgttaattttcttcaagta-tttacatacatataagttttattataaattttt-gttaacgtatcctaaccgtatcgtatcct 42040161  T
Q  453 aaattttaaaaattttgcgtattcacgtatctgtatcgtatcgtacccgcacccgtatctgtatctgggcttcatag 529  Q
    |||||| ||||| | ||| ||| | | || | ||||||||||| ||||||||||||||| |||||  ||||||||||    
T  42040160 aaatttaaaaaaatatgcatatccgcatacccgtatcgtatcgcacccgcacccgtatccgtatcgtggcttcatag 42040084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 355 - 529
Target Start/End: Original strand, 43728247 - 43728423
Alignment:
Q  355 taatgaagggtaattagtgcttattttcttcaagtgctttacata--tataagttttagtataaattttttgttaacgtatcttagccgtatcgtatcct 452  Q
    |||| ||| ||||| |||| |||||||||| ||||  || |||||  |||||| |||||||||||   ||||| |||||||| |||||||||||||| ||    
T  43728247 taattaagagtaatcagtgtttattttctttaagtatttcacatacatataagatttagtataaaaaatttgtcaacgtatcctagccgtatcgtattct 43728346  T
Q  453 aaattttaaaaattttgcgtattcacgtatctgtatcgtatcgtacccgcacccgtatctgtatctgggcttcatag 529  Q
    |||||| ||||| || |||||| |||||| | ||||| |||| |||| |||| |||||||||||| |||||||||||    
T  43728347 aaatttaaaaaaattcgcgtatccacgtacccgtatcatatcctacctgcactcgtatctgtatccgggcttcatag 43728423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 196 - 345
Target Start/End: Original strand, 22201069 - 22201217
Alignment:
Q  196 atacttataagatatttcacaaatacgtatcctagaaatgatgaagggtaagaaagtgagacaatgttgtaaaaatttagtagaaatgtatacgaatcaa 295  Q
    |||||||||||||| ||||||  |||||||| |||||| |||||| ||||| ||| |||||||||||| |||||||| ||| || ||||||| |  | ||    
T  22201069 atacttataagatacttcacaggtacgtatcatagaaaagatgaatggtaaaaaaatgagacaatgttctaaaaattcagtggagatgtatatgttttaa 22201168  T
Q  296 ttttagatatgaatctgtaaaattgtttctcgatgaactacttaaaatta 345  Q
    |||||||| || ||| ||| |||||||||||||| ||| |||||||||||    
T  22201169 ttttagat-tgtatcggtagaattgtttctcgataaaccacttaaaatta 22201217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 196 - 345
Target Start/End: Complemental strand, 22236752 - 22236604
Alignment:
Q  196 atacttataagatatttcacaaatacgtatcctagaaatgatgaagggtaagaaagtgagacaatgttgtaaaaatttagtagaaatgtatacgaatcaa 295  Q
    |||||||||||||| ||||||  |||||||| |||||| |||||| ||||| ||| |||||||||||| |||||||| ||| || ||||||| |  | ||    
T  22236752 atacttataagatacttcacaggtacgtatcatagaaaagatgaatggtaaaaaaatgagacaatgttctaaaaattcagtggagatgtatatgttttaa 22236653  T
Q  296 ttttagatatgaatctgtaaaattgtttctcgatgaactacttaaaatta 345  Q
    |||||||| || ||| ||| |||||||||||||| ||| |||||||||||    
T  22236652 ttttagat-tgtatcggtagaattgtttctcgataaaccacttaaaatta 22236604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 399 - 497
Target Start/End: Complemental strand, 43495641 - 43495543
Alignment:
Q  399 atataagttttagtataaattttttgttaacgtatcttagccgtatcgtatcctaaattttaaaaattttgcgtattcacgtatctgtatcgtatcgta 497  Q
    ||||||||||||||||||| ||||||||||||||||||| ||||||  |||| ||||||||||||| | ||||||||| | || ||||||| |||||||    
T  43495641 atataagttttagtataaaatttttgttaacgtatcttaaccgtattatatcttaaattttaaaaagtctgcgtattcgcatacctgtatcatatcgta 43495543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 103 - 324
Target Start/End: Complemental strand, 2185986 - 2185763
Alignment:
Q  103 cggatacgtacccacgaagtatcataattaattattttaaattttaatc--ttttttatctgatacgtatagaatattccacagatacaacaaggatact 200  Q
    |||||| |||| || ||||||||| ||||||||| ||||| ||||||    | | ||||| ||||| ||||  ||| |||| | ||||| ||||||||||    
T  2185986 cggatatgtactcatgaagtatcagaattaattaatttaatttttaaaaaatatattatcggatacttatatgatactccatatataca-caaggatact 2185888  T
Q  201 tataagatatttcacaaatacgtatcctagaaat-gatgaagggtaagaaagtgagacaatgttgtaaaaatttagtagaaatgtatacgaatcaatttt 299  Q
    ||||||||| |||||| ||| ||||||||||||  ||| || ||||| |||  |||||||||||||||||||| || ||| || |||| || ||||||||    
T  2185887 tataagatacttcacatatatgtatcctagaaaaagataaaaggtaaaaaaacgagacaatgttgtaaaaattaaggagagatatatatgattcaatttt 2185788  T
Q  300 agatatgaatctgtaaaattgtttc 324  Q
    ||||||| ||  ||| |||||||||    
T  2185787 agatatgcattagtagaattgtttc 2185763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 375 - 529
Target Start/End: Complemental strand, 25310792 - 25310636
Alignment:
Q  375 ttattttcttcaagtgctttacata--tataagttttagtataaattttttgttaacgtatcttagccgtatcgtatcctaaattttaaaaattttgcgt 472  Q
    ||||||||||||| |  ||||||||  |||||||||||||||||  ||||||||||||||||||| | |||||||||||||||||| ||||| || | ||    
T  25310792 ttattttcttcaaatattttacatacatataagttttagtataatatttttgttaacgtatcttaactgtatcgtatcctaaatttaaaaaaattcgagt 25310693  T
Q  473 attcacgtatctgtatcgtatcgtacccgcacccgtatctgtatctgggcttcatag 529  Q
    || |  ||  |  |||||||||||||| |||||| ||||  |||| |||||||||||    
T  25310692 atccgtgtgcccatatcgtatcgtaccggcacccatatcattatccgggcttcatag 25310636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 54 - 323
Target Start/End: Complemental strand, 31397488 - 31397217
Alignment:
Q  54 caaaatggaaacgtacccgtatcgaataccgatacttcatggatacttgcggatacgtacccacgaagtatcataattaattattttaaatttta--atc 151  Q
    ||||||||| ||||||| |||||| |||| ||||||||| ||||||| ||| ||| |||| |||| ||||||  ||||||||||||||| ||  |  ||     
T  31397488 caaaatggagacgtacctgtatcggatactgatacttcacggatactcgcgaataggtacacacggagtatcggaattaattattttaatttaaaatata 31397389  T
Q  152 ttttttatctgatacgtatagaatattccacagatacaacaaggatacttataagatatttcacaaatacgtatcctag-aaatgatgaagggtaagaaa 250  Q
    | ||||||| ||||| ||||  |||||| |||  ||| |||  |||||||||||||| ||||||| ||||||||||| | |||  | ||| ||||| |||    
T  31397388 tattttatcggatacttataagatattcgacatgtac-acacagatacttataagatgtttcacacatacgtatcctggaaaaaaacgaaaggtaaaaaa 31397290  T
Q  251 gtgagacaatgttgtaaaaatttagtagaaatgtatacgaatcaattttagatatgaatctgtaaaattgttt 323  Q
    |||||||  |||||| |||||| | | ||||| |||| || ||||||| |||||| ||||  || ||||||||    
T  31397289 gtgagactgtgttgtgaaaattgaatggaaatatatatgactcaatttaagatataaatcactataattgttt 31397217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 355 - 509
Target Start/End: Complemental strand, 22542737 - 22542585
Alignment:
Q  355 taatgaagggtaattagtgcttattttcttcaagtgctttacatatat-aagttttagtataaattttttgttaacgtatcttagccgtatcgtatccta 453  Q
    |||||||| ||||| | || |||||||||||||||  |||| ||| || |||||||| |||| |||||||||||| ||||||||||| |||||||| |||    
T  22542737 taatgaagagtaatcaatgtttattttcttcaagtattttatatacattaagttttattatatattttttgttaatgtatcttagccatatcgtattcta 22542638  T
Q  454 aattttaaaaattttgcgtattcacgtatctgtatcgtatcgtacccgcacccgta 509  Q
    ||||| ||||  ||  ||||  | |||||| |||||||||||||||||||||||||    
T  22542637 aatttaaaaatattcacgta--ctcgtatc-gtatcgtatcgtacccgcacccgta 22542585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 399 - 499
Target Start/End: Original strand, 48138805 - 48138904
Alignment:
Q  399 atataagttttagtataaattttttgttaacgtatcttagccgtatcgtatcctaaattttaaaaattttgcgtattcacgtatctgtatcgtatcgtac 498  Q
    |||||| ||||||||||||| ||||||||| |||||||||||||||||| |||  |||||||||| ||| ||||||  ||||| | ||||||||||||||    
T  48138805 atataaattttagtataaatattttgttaatgtatcttagccgtatcgtttcc-gaattttaaaattttcgcgtatctacgtacccgtatcgtatcgtac 48138903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 399 - 474
Target Start/End: Complemental strand, 9229387 - 9229313
Alignment:
Q  399 atataagttttagtataaattttttgttaacgtatcttagccgtatcgtatcctaaattttaaaaattttgcgtat 474  Q
    |||||| |||||||||||||  |||||||||||||||||||||||||||||| | |||||||||||||| ||||||    
T  9229387 atataaattttagtataaataatttgttaacgtatcttagccgtatcgtatcat-aattttaaaaatttcgcgtat 9229313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 397 - 467
Target Start/End: Complemental strand, 44797947 - 44797877
Alignment:
Q  397 atatataagttttagtataaattttttgttaacgtatcttagccgtatcgtatcctaaattttaaaaattt 467  Q
    |||||||| |||||||| |||| |||||||||||||||||||  |||| ||||||||||||||||||||||    
T  44797947 atatataaattttagtagaaatattttgttaacgtatcttagatgtatggtatcctaaattttaaaaattt 44797877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 34 - 147
Target Start/End: Original strand, 45804739 - 45804852
Alignment:
Q  34 cctatgaagtccgaatactgcaaaatggaaacgtacccgtatcgaataccgatacttcatggatacttgcggatacgtacccacgaagtatcataattaa 133  Q
    ||||||||| || ||||||  |||| ||| |||||||||||||  |||||||||||||| ||||| | | |||||||||  |||||||||||  ||||||    
T  45804739 cctatgaagcccaaatactctaaaacggagacgtacccgtatcagataccgatacttcacggatattcgaggatacgtattcacgaagtatcggaattaa 45804838  T
Q  134 ttattttaaatttt 147  Q
    ||||||||| ||||    
T  45804839 ttattttaattttt 45804852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 375 - 463
Target Start/End: Original strand, 48153236 - 48153326
Alignment:
Q  375 ttattttcttcaagtgctttacata--tataagttttagtataaattttttgttaacgtatcttagccgtatcgtatcctaaattttaaaa 463  Q
    |||||| ||||||||  ||||||||  ||||| |||||||||||| ||||||||||| ||| || |||||||| |||||||||||||||||    
T  48153236 ttatttacttcaagtattttacatacatataaattttagtataaaatttttgttaacatattttggccgtatcatatcctaaattttaaaa 48153326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 37 - 142
Target Start/End: Original strand, 24699651 - 24699756
Alignment:
Q  37 atgaagtccgaatactgcaaaatggaaacgtacccgtatcgaataccgatacttcatggatacttgcggatacgtacccacgaagtatcataattaatta 136  Q
    |||||||||| ||||| ||||||||| ||||| | |||||| |||| |||||| |  |||||||  |||||||||| ||||| ||||||  |||||||||    
T  24699651 atgaagtccggatactccaaaatggagacgtatctgtatcggatactgatactccgcggatactctcggatacgtatccacggagtatcggaattaatta 24699750  T
Q  137 ttttaa 142  Q
    ||||||    
T  24699751 ttttaa 24699756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 55 - 310
Target Start/End: Original strand, 48138325 - 48138582
Alignment:
Q  55 aaaatggaaacgtacccgtatcgaataccgatacttcatggatacttgcggatacgtacccacgaagtatcataattaattattttaaatttta--atct 152  Q
    |||||||| ||| |||||||||| ||| ||||| | || |||||||  |||||||||||| ||||| ||||  ||||||||||||||| ||  |  || |    
T  48138325 aaaatggagacgcacccgtatcggatatcgataatccacggatactctcggatacgtacctacgaaatatcggaattaattattttaatttaaaatatat 48138424  T
Q  153 tttttatctgatacgtatagaatattccacagataca-acaaggatacttataagatatttcacaaatacgtatcctag-aaatgatgaagggtaagaaa 250  Q
     ||||||| ||||| ||||  ||| || ||||||||| ||||  |||||||||||||| |||||| | ||||||||| | |||  ||||||  |||  ||    
T  48138425 attttatcggatacttataagatactcgacagatacacacaa--atacttataagatacttcacagagacgtatcctggaaaaaaatgaagcttaaataa 48138522  T
Q  251 gtgagacaatgttgtaaaaatttagtagaaatgtatacgaatcaattttagatatgaatc 310  Q
     ||||||  |||| | |||||||| | || ||||||| || ||||||| |||||||||||    
T  48138523 atgagactgtgttctgaaaatttaatggagatgtatatgattcaatttaagatatgaatc 48138582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 83 - 271
Target Start/End: Complemental strand, 25482883 - 25482695
Alignment:
Q  83 cgatacttcatggatacttgcggatacgtacccacgaagtatcataattaattattttaaattttaatc--ttttttatctgatacgtatagaatattcc 180  Q
    ||||||||||| |||||  | ||||||||||  ||||| ||| | ||||||||||||||| |||||||   | ||||||| ||||  |||   ||| |||    
T  25482883 cgatacttcatcgatacacgtggatacgtacatacgaaatataaaaattaattattttaatttttaataaatattttatcggatatttatgtgatactcc 25482784  T
Q  181 acagatacaacaaggatacttataagatatttcacaaatacgtatcctagaaatg-atgaagggtaagaaagtgagacaatgttgtaaaaat 271  Q
    ||| ||||| ||  ||||||| ||||||| |||||||||||||||  |||||| | |||||   ||| ||||||||||||||||||||||||    
T  25482783 acatataca-ca--gatacttctaagatacttcacaaatacgtattttagaaaaggatgaaaattaaaaaagtgagacaatgttgtaaaaat 25482695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 420 - 509
Target Start/End: Complemental strand, 46191996 - 46191908
Alignment:
Q  420 ttttgttaacgtatcttagccgtatcgtatcctaaattttaaaaattttgcgtattcacgtatctgtatcgtatcgtacccgcacccgta 509  Q
    |||||||||||||||||||  |||| ||||||||| |||||||||||| | |||| | | ||||  ||||||||||||||||||| ||||    
T  46191996 ttttgttaacgtatcttagttgtattgtatcctaa-ttttaaaaatttcgtgtatccgcatatccatatcgtatcgtacccgcactcgta 46191908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 223 - 287
Target Start/End: Original strand, 42509175 - 42509239
Alignment:
Q  223 tatcctagaaatgatgaagggtaagaaagtgagacaatgttgtaaaaatttagtagaaatgtata 287  Q
    ||||||||| | ||||| |||||| ||||||||||||||||||||||||| |||| |||| ||||    
T  42509175 tatcctagacaagatgatgggtaaaaaagtgagacaatgttgtaaaaattcagtaaaaatatata 42509239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 103 - 142
Target Start/End: Complemental strand, 44798448 - 44798409
Alignment:
Q  103 cggatacgtacccacgaagtatcataattaattattttaa 142  Q
    |||||||||||||| |||||||||||||||||||||||||    
T  44798448 cggatacgtacccatgaagtatcataattaattattttaa 44798409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 402 - 509
Target Start/End: Original strand, 47278293 - 47278400
Alignment:
Q  402 taagttttagtataaattttttgttaacgtatcttagccgtatcgtatcctaaattttaaaaattttgcgtattcacgtatctgtatcgtatcgtacccg 501  Q
    |||||||||||| |||||||||||||||||||| |||| | ||  | ||||||||||||||| || |  |||| |   ||| |||||| ||||||||| |    
T  47278293 taagttttagtagaaattttttgttaacgtatcgtagcagcattatctcctaaattttaaaatttctatgtatccgtatatttgtatcatatcgtaccag 47278392  T
Q  502 cacccgta 509  Q
    ||||||||    
T  47278393 cacccgta 47278400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 355 - 458
Target Start/End: Original strand, 45492493 - 45492597
Alignment:
Q  355 taatgaagggtaattagtgcttattttcttcaagtgctttacatata--taagttttagtataaattttttgttaacgtatcttagccgtatcgtatcct 452  Q
    |||||||| ||||| | ||  ||||||||||||||  |||||||| |  |||||||| |||||||||||||||||| || |||| ||| ||||||| |||    
T  45492493 taatgaagagtaatcaatgtatattttcttcaagtattttacatacaaataagttttggtataaattttttgttaaagtgtcttggcc-tatcgtaccct 45492591  T
Q  453 aaattt 458  Q
    ||||||    
T  45492592 aaattt 45492597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 103 - 142
Target Start/End: Complemental strand, 9229593 - 9229554
Alignment:
Q  103 cggatacgtacccacgaagtatcataattaattattttaa 142  Q
    |||||||||||||||| ||||||| |||||||||||||||    
T  9229593 cggatacgtacccacggagtatcagaattaattattttaa 9229554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 399 - 466
Target Start/End: Original strand, 24699962 - 24700028
Alignment:
Q  399 atataagttttagtataaattttttgttaacgtatcttagccgtatcgtatcctaaattttaaaaatt 466  Q
    |||||| ||||||||||||| |||| ||||||||||||   |||||| |||||| |||||||||||||    
T  24699962 atataaattttagtataaatatttttttaacgtatcttgaacgtatcatatcct-aattttaaaaatt 24700028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 100 - 142
Target Start/End: Original strand, 2483638 - 2483680
Alignment:
Q  100 ttgcggatacgtacccacgaagtatcataattaattattttaa 142  Q
    |||| |||||||||||||  |||||||||||||||||||||||    
T  2483638 ttgcagatacgtacccacagagtatcataattaattattttaa 2483680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 418 - 468
Target Start/End: Original strand, 3393522 - 3393572
Alignment:
Q  418 ttttttgttaacgtatcttagccgtatcgtatcctaaattttaaaaatttt 468  Q
    ||||||||| | |||||  |||||||||||||||| |||||||||||||||    
T  3393522 ttttttgttgaagtatcacagccgtatcgtatcctgaattttaaaaatttt 3393572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 281 - 355
Target Start/End: Original strand, 7857940 - 7858014
Alignment:
Q  281 atgtatacgaatcaattttagatatgaatctgtaaaattgtttctcgatgaactacttaaaattacacttattgt 355  Q
    ||||||| || ||||||||||||||||| | ||| |||||||||||  ||||| |||||||| || | |||||||    
T  7857940 atgtatatgattcaattttagatatgaaacagtagaattgtttctcattgaaccacttaaaaatatatttattgt 7858014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 412 - 474
Target Start/End: Original strand, 21180325 - 21180387
Alignment:
Q  412 tataaattttttgttaacgtatcttagccgtatcgtatcctaaattttaaaaattttgcgtat 474  Q
    ||||| |||||| ||||||| ||| |||||||||||||| |||||||| ||| |||| |||||    
T  21180325 tataatttttttattaacgtttctcagccgtatcgtatcttaaattttgaaagttttccgtat 21180387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 377 - 464
Target Start/End: Complemental strand, 45648008 - 45647920
Alignment:
Q  377 attttcttcaagtgctttacatata--taagttttagtataaattttttgttaacgtatcttagccgtatcgtatcctaaattttaaaaa 464  Q
    |||||||||||||  ||||||||||  ||||||||| ||||||||||| ||| | ||||| || | ||| |||||||||||||| |||||    
T  45648008 attttcttcaagtattttacatatagataagttttattataaattttt-gttcatgtatcctaactgtaccgtatcctaaatttaaaaaa 45647920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 274 - 355
Target Start/End: Complemental strand, 25311080 - 25310999
Alignment:
Q  274 agtagaaatgtatacgaatcaattttagatatgaatctgtaaaattgtttctcgatgaactacttaaaattacacttattgt 355  Q
    |||||| ||||||| || | ||||||| ||||| | | ||| |||||||||| ||||||| ||||||||||| |||| ||||    
T  25311080 agtagagatgtatatgattaaattttaaatatgcaacagtataattgtttcttgatgaaccacttaaaattatacttcttgt 25310999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 355 - 417
Target Start/End: Complemental strand, 47843568 - 47843504
Alignment:
Q  355 taatgaagggtaattagtgcttattttcttcaagtgctttacat--atataagttttagtataaa 417  Q
    |||||||||||||| | || |||||||||||||||  |||||||  |||||||||||| ||||||    
T  47843568 taatgaagggtaatcaatgtttattttcttcaagtattttacatacatataagttttattataaa 47843504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 377 - 446
Target Start/End: Original strand, 7858214 - 7858285
Alignment:
Q  377 attttcttcaagtgctttacat--atataagttttagtataaattttttgttaacgtatcttagccgtatcg 446  Q
    |||||||||||||  |||||||  |||||||||||| ||||||   ||||||||||||||| |||| |||||    
T  7858214 attttcttcaagtattttacatgcatataagttttaatataaaagatttgttaacgtatctaagccatatcg 7858285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 123; Significance: 7e-63; HSPs: 49)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 123; E-Value: 7e-63
Query Start/End: Original strand, 72 - 345
Target Start/End: Original strand, 36467052 - 36467325
Alignment:
Q  72 gtatcgaataccgatacttcatggatacttgcggatacgtacccacgaagtatcataattaattattttaaattttaatctt-ttttatctgatacgtat 170  Q
    |||||| ||||||||||| ||  |||||||| | |||||||| |||||||||||  ||||||||||||||| ||  ||   | ||||||||||||| |||    
T  36467052 gtatcggataccgatactccacagatacttgtgaatacgtactcacgaagtatcggaattaattattttaatttaaaaaaatattttatctgatacttat 36467151  T
Q  171 agaatattccacagatacaacaaggatacttataagatatttcacaaatacgtatcctagaaatgatgaagggtaagaaagtgagacaatgttgtaaaaa 270  Q
    || ||| |||||||||||| ||| ||||||||||||||| |||||| ||| |||  ||||| ||||||| ||||||||||||||||||||||||||||||    
T  36467152 aggataatccacagataca-caaagatacttataagatacttcacagatatgtaaactagagatgatgacgggtaagaaagtgagacaatgttgtaaaaa 36467250  T
Q  271 tttagtagaaatgtatacgaatcaattttagatatgaatctgtaaaattgtttctcgatgaactacttaaaatta 345  Q
    || ||| |||||||||| || ||||||||||||||| ||  |||||||||||||||||||||| |||||||||||    
T  36467251 ttcagttgaaatgtatatgattcaattttagatatgcataagtaaaattgtttctcgatgaaccacttaaaatta 36467325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 48 - 355
Target Start/End: Original strand, 7017652 - 7017963
Alignment:
Q  48 atactgcaaaatggaaacgtacccgtatcgaataccgatacttcatggatacttgcggatacgtacccacgaagtatcataattaattattttaaatttt 147  Q
    ||||| ||||| ||| |||||||||||||| |||| || |||||| ||||||| ||||||||||||||||||| ||||  |||||||||||| |||||||    
T  7017652 atacttcaaaacggagacgtacccgtatcggatactgacacttcacggatactcgcggatacgtacccacgaa-tatcggaattaattattt-aaatttt 7017749  T
Q  148 aatc---ttttttatctgatacgtatagaatattcc---acagatacaacaaggatacttataagatatttcacaaatacgtatcctagaaat-gatgaa 240  Q
    ||     | ||||||| ||||| ||||  ||| |||   ||| ||||| ||| |||| |||||||||| |||||| ||| || |||||||||  ||||||    
T  7017750 aaaaaaatattttatcggatacttatatgatactcctccacaaataca-caaagatatttataagatacttcacatatatgtttcctagaaaaagatgaa 7017848  T
Q  241 gggtaagaaagtgagacaatgttgtaaaaatttagtagaaatgtatacgaatcaattttagatatgaatctgtaaaattgtttctcgatgaactacttaa 340  Q
    |||||| ||||||||||||||||||||||||| |||||| ||||||| || ||||||||||||||| ||  ||| |||||||||||||| ||| ||||||    
T  7017849 gggtaaaaaagtgagacaatgttgtaaaaattcagtagagatgtatatgattcaattttagatatgcatgggtagaattgtttctcgataaaccacttaa 7017948  T
Q  341 aattacacttattgt 355  Q
    ||||| |||| ||||    
T  7017949 aattatacttcttgt 7017963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 355 - 526
Target Start/End: Original strand, 36467466 - 36467637
Alignment:
Q  355 taatgaagggtaattagtgcttattttcttcaagtgctttacatatataagttttagtataaattttttgttaacgtatcttagccgtatcgtatcctaa 454  Q
    ||||||| |||||| ||||||||||||||||||||| ||||||||||||  ||||||||||||  |||||||||||||| ||||||||||||||||||||    
T  36467466 taatgaaaggtaataagtgcttattttcttcaagtgttttacatatatatattttagtataaaaattttgttaacgtattttagccgtatcgtatcctaa 36467565  T
Q  455 attttaaaaattttgcgtattcacgtatctgtatcgtatcgtacccgcacccgtatctgtatctgggcttca 526  Q
    |||||  |||  ||| || | | |||| | ||||| ||||||||| ||| |||||||||||||||| |||||    
T  36467566 atttttgaaaaattgtgtctccgcgtacccgtatcatatcgtacctgcatccgtatctgtatctggacttca 36467637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 79 - 356
Target Start/End: Complemental strand, 11562993 - 11562719
Alignment:
Q  79 ataccgatacttcatggatacttgcggatacgtacccacgaagtatcataattaattattttaaatttt--aatcttttttatctgatacgtatagaata 176  Q
    |||||||||||||| ||||||| ||||||||||| |||||||||| |  | ||||| ||||||| ||||  ||  | ||||||||||||| ||| || ||    
T  11562993 ataccgatacttcacggatactcgcggatacgtatccacgaagtaccgga-ttaataattttaattttttaaaaatattttatctgatacttatgga-ta 11562896  T
Q  177 ttccacagatacaacaaggatacttataagatatttcacaaatacgtatcctagaaatgatgaagggtaagaaagtgagacaatgttgtaaaaatttagt 276  Q
      ||  | ||||| |||  |||||||||||||| ||||||||||||||| | ||||| |||||||||||| ||||||||||||||||||| ||||| |||    
T  11562895 ccccgtaaataca-caaaaatacttataagatacttcacaaatacgtattcgagaaaagatgaagggtaaaaaagtgagacaatgttgtagaaattcagt 11562797  T
Q  277 agaaatgtatacgaatcaattttagatatgaatctgtaaaattgtttctcgatgaactacttaaaattacacttattgta 356  Q
    ||| || |||| || |||||||| ||||||||||   | |||||||||||||| ||| ||||||||||| |||| |||||    
T  11562796 agagatatatatgattcaattttggatatgaatc--aacaattgtttctcgataaaccacttaaaattatacttcttgta 11562719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 81; E-Value: 8e-38
Query Start/End: Original strand, 105 - 345
Target Start/End: Original strand, 35298312 - 35298554
Alignment:
Q  105 gatacgtacccacgaagtatcataattaattattttaaattttaatcttt-tttatctgatacgtatagaatattccacagatacaacaaggatacttat 203  Q
    |||||||||||||||||||||| ||||||||||||||| ||  ||   || ||| || ||||| ||||  ||| |||||||||||| ||| |||| ||||    
T  35298312 gatacgtacccacgaagtatcagaattaattattttaatttaaaagaattatttttcggatacttatatgatactccacagataca-caaagatatttat 35298410  T
Q  204 aagatatttcacaaatacgtatcctagaaat--gatgaagggtaagaaagtgagacaatgttgtaaaaatttagtagaaatgtatacgaatcaattttag 301  Q
    |||||| |||||| |||||||| |||||||   ||| || ||||| ||||||||||||||||||||||||| |||||| |||||||  | ||||||||||    
T  35298411 aagatacttcacatatacgtattctagaaaaaagataaaaggtaaaaaagtgagacaatgttgtaaaaattcagtagagatgtatataattcaattttag 35298510  T
Q  302 atatgaatctgtaaaattgtttctcgatgaactacttaaaatta 345  Q
    | ||| |||  || |||| ||||||||||||| |||||||||||    
T  35298511 aaatgcatcaatagaattatttctcgatgaaccacttaaaatta 35298554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 206 - 355
Target Start/End: Original strand, 41323867 - 41324017
Alignment:
Q  206 gatatttcacaaatacgtatcctagaaat-gatgaagggtaagaaagtgagacaatgttgtaaaaatttagtagaaatgtatacgaatcaattttagata 304  Q
    |||| |||||| ||| ||||||||||||  |||||| ||||| ||||||||||||||||||||||||| |||||| ||||||| || |||||||||||||    
T  41323867 gatacttcacatatatgtatcctagaaaaagatgaacggtaaaaaagtgagacaatgttgtaaaaattcagtagagatgtatatgattcaattttagata 41323966  T
Q  305 tgaatctgtaaaattgtttctcgatgaactacttaaaattacacttattgt 355  Q
    || ||| ||||||||||||||||||||||  |||||||||| |||| ||||    
T  41323967 tgcatcagtaaaattgtttctcgatgaaccgcttaaaattatacttcttgt 41324017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 79 - 355
Target Start/End: Complemental strand, 38221886 - 38221608
Alignment:
Q  79 ataccgatacttcatggatacttgcggatacgtacccacgaagtatcataattaattattttaaattttaatc--ttttttatctgatacgtatagaata 176  Q
    ||||||||||| || ||||||| ||||||||| ||||||||||||||  |||||||||||| || ||||||    | ||||| |  |||| ||||  |||    
T  38221886 ataccgatactccacggatactcgcggatacgcacccacgaagtatcggaattaattatttaaatttttaaaaaatattttaacgaatacttatacgata 38221787  T
Q  177 ttccacagatacaacaaggatacttataagatatttcacaaatacgtatcctagaaat-gatgaagggtaagaaagtgagacaatgttgtaaaaatttag 275  Q
     | | |||||||| |||||||| ||| |||||| |||||| ||| ||||||||||||  ||||||| |||| | ||||||||||||||||||| ||| |     
T  38221786 cttcgcagataca-caaggatatttacaagatacttcacatatatgtatcctagaaaaagatgaagagtaaaagagtgagacaatgttgtaaacattcaa 38221688  T
Q  276 tagaaatgtatacgaatcaattttagatatgaatctgtaaaattgtttctcgatgaactacttaaaattacacttattgt 355  Q
    |||| ||||||| || |||||||| |||||| |||  || |||||||||| ||||||  ||||||||||| |||| ||||    
T  38221687 tagagatgtatatgattcaattttggatatgcatcactagaattgtttcttgatgaatcacttaaaattatacttcttgt 38221608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 194 - 355
Target Start/End: Complemental strand, 42794930 - 42794768
Alignment:
Q  194 ggatacttataagatatttcacaaatacgtatcctagaaat-gatgaagggtaagaaagtgagacaatgttgtaaaaatttagtagaaatgtatacgaat 292  Q
    ||||||||||  |||| |||||||| ||||||||||||||  ||||||| |||| ||||||||||||||||||||||||| | || | ||||||  || |    
T  42794930 ggatacttatgggatacttcacaaacacgtatcctagaaaaagatgaagagtaaaaaagtgagacaatgttgtaaaaattcattatagatgtatgtgact 42794831  T
Q  293 caattttagatatgaatctgtaaaattgtttctcgatgaactacttaaaattacacttattgt 355  Q
    |||||||||||||| |||  || |||||||||||||||||  ||||||||||| |||||||||    
T  42794830 caattttagatatgcatcaatagaattgtttctcgatgaaacacttaaaattatacttattgt 42794768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 355 - 530
Target Start/End: Original strand, 7018146 - 7018323
Alignment:
Q  355 taatgaagggtaattagtgcttattttcttcaagtgctttacatatat--aagttttagtataaattttttgttaacgtatcttagccgtatcgtatcct 452  Q
    |||||||| ||||| | || |||||||||||||||  |||||||| ||  |||||||||||||||  |||||||||||||||||||||||||||||||||    
T  7018146 taatgaagagtaatcaatgtttattttcttcaagtattttacatacatgtaagttttagtataaaaattttgttaacgtatcttagccgtatcgtatcct 7018245  T
Q  453 aaattttaaaaattttgcgtattcacgtatctgtatcgtatcgtacccgcacccgtatctgtatctgggcttcatagg 530  Q
    |||||| |||||  |   ||||||   || ||||||| |||||||||| |||||||||   |||| ||||||||||||    
T  7018246 aaatttaaaaaaaatcatgtattcgtatacctgtatcatatcgtacccacacccgtattaatatcagggcttcatagg 7018323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 181 - 350
Target Start/End: Complemental strand, 37273078 - 37272909
Alignment:
Q  181 acagatacaacaaggatacttataagatatttcacaaatacgtatcctaga-aatgatgaagggtaagaaagtgagacaatgttgtaaaaatttagtaga 279  Q
    ||||||||| ||| ||||||| |||||||||||||| ||| |||  ||| | || |||||| ||||| ||||| ||||||||||||||||||| ||||||    
T  37273078 acagataca-caatgatacttgtaagatatttcacatatatgtaatctaaacaaagatgaaaggtaaaaaagtaagacaatgttgtaaaaattcagtaga 37272980  T
Q  280 aatgtatacgaatcaattttagatatgaatctgtaaaattgtttctcgatgaactacttaaaattacactt 350  Q
     ||||||| || ||||||||||| ||| |||  ||||||||||| ||||||||| ||||||||||| ||||    
T  37272979 gatgtatatgattcaattttagacatgcatcaataaaattgtttttcgatgaaccacttaaaattatactt 37272909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 195 - 355
Target Start/End: Original strand, 30485559 - 30485719
Alignment:
Q  195 gatacttataagatatttcacaaatacgtatcctagaaatgatgaagggtaagaaagtgagacaatgttgtaaaaatttagtagaaatgtatacgaatca 294  Q
    |||||||||||||||||||||||||| |||| ||||||| |||||| ||||| ||||||||| |||| | |||||||| |||||| |||| |  |  |||    
T  30485559 gatacttataagatatttcacaaatatgtattctagaaaagatgaaaggtaaaaaagtgagataatgctctaaaaattcagtagagatgtgtgtggttca 30485658  T
Q  295 attttagatatgaatctgtaaaattgtttctcgatgaactacttaaaattacacttattgt 355  Q
    |||||||||||| |||  || |||||||||||| ||||| ||||||| ||| |||| ||||    
T  30485659 attttagatatgcatcattagaattgtttctcggtgaaccacttaaatttatacttcttgt 30485719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 375 - 464
Target Start/End: Original strand, 40364016 - 40364107
Alignment:
Q  375 ttattttcttcaagtgctttacata--tataagttttagtataaattttttgttaacgtatcttagccgtatcgtatcctaaattttaaaaa 464  Q
    |||||||||||||||  ||||| ||  ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  40364016 ttattttcttcaagtattttacgtacatataagttttagtataaattttttgttaacgtatcttagtcgtatcgtatcctaaattttaaaaa 40364107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 375 - 511
Target Start/End: Original strand, 35306432 - 35306570
Alignment:
Q  375 ttattttcttcaagtgctttacat--atataagttttagtataaattttttgttaacgtatcttagccgtatcgtatcctaaattttaaaaattttgcgt 472  Q
    |||||||||||||||  |||||||  |||||| ||||||||| | ||||||||||||||||| || ||||||| |||||||||||| | ||| |||||||    
T  35306432 ttattttcttcaagtattttacatgcatataaattttagtattatttttttgttaacgtatcctaaccgtatcatatcctaaatttaataaaatttgcgt 35306531  T
Q  473 attcacgtatctgtatcgtatcgtacccgcacccgtatc 511  Q
    || |||||| | || |||||||||||| |||||||||||    
T  35306532 atccacgtacccgtctcgtatcgtacctgcacccgtatc 35306570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 375 - 474
Target Start/End: Original strand, 40498828 - 40498928
Alignment:
Q  375 ttattttcttcaagtgctttacata--tataagttttagtataaattttttgttaacgtatcttagccgtatcgtatcctaaattttaaaaattttgcgt 472  Q
    |||||||||||||||  ||||||||  |||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||| ||| |||    
T  40498828 ttattttcttcaagtattttacatacatataagttttagtataaatttttt-ttaacgtatcttagctgtatcgtatcctaaattttaaaaaatttccgt 40498926  T
Q  473 at 474  Q
    ||    
T  40498927 at 40498928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 190 - 342
Target Start/End: Complemental strand, 16496955 - 16496802
Alignment:
Q  190 acaaggatacttataagatatttcacaaatacgtatcctagaaatgatgaagggtaagaaa-gtgagacaatgttgtaaaaatttagtagaaatgtatac 288  Q
    ||||||||||| |||||||| || ||| ||| |||||||||||| ||| ||| |||| ||| ||| ||||||||||| |||||| | |  | |||||||     
T  16496955 acaaggatactaataagatacttaacatatatgtatcctagaaaagataaagagtaaaaaaagtgggacaatgttgtgaaaattcaatgaagatgtatat 16496856  T
Q  289 gaatcaattttagatatgaatctgtaaaattgtttctcgatgaactacttaaaa 342  Q
    || |||||||||||| |||||| |||||||||||||||||||||| ||||||||    
T  16496855 gattcaattttagatgtgaatcagtaaaattgtttctcgatgaaccacttaaaa 16496802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 349 - 509
Target Start/End: Original strand, 26352911 - 26353070
Alignment:
Q  349 ttattgtaatgaagggtaattagtgcttattttcttcaagtgctttacat-atataagttttagtataaattttttgttaacgtatcttagccgtatcgt 447  Q
    |||| ||| ||||| ||||| | |||||||||| |||||||  ||||||| |||||| ||||||||||||| ||||||||||||||||||||||||| ||    
T  26352911 ttatagtattgaagagtaatcaatgcttatttt-ttcaagtattttacatgatataaattttagtataaatattttgttaacgtatcttagccgtatggt 26353009  T
Q  448 atcctaaattttaaaaattttgcgtattcacgtatctgtatcgtatcgtacccgcacccgta 509  Q
    ||||| |||||| ||||||| | ||||||||||| ||||| | ||| ||| || ||||||||    
T  26353010 atcctgaatttt-aaaatttcgtgtattcacgtacctgtagcatattgtatccccacccgta 26353070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 74 - 298
Target Start/End: Original strand, 40498426 - 40498652
Alignment:
Q  74 atcgaataccgatacttcatggatacttgcggatacgtacccacgaagtatcataattaattattttaaattttaatc--ttttttatctgatacgtata 171  Q
    |||| ||||||||||| ||  |||||| | ||||||| ||||||||||||||  | |||||||||| || ||||||    | ||||| | ||||| ||||    
T  40498426 atcggataccgatactccacagatactcgtggatacgcacccacgaagtatcgaacttaattatttaaatttttaaaaaatattttaacggatacttata 40498525  T
Q  172 gaatattccacagatacaacaaggatacttataagatatttcacaaatacgtatcctag-aaatgatgaagggtaagaaagtgagacaatgttgtaaaaa 270  Q
      ||| |||  ||||||| |||||||| |||||||||| |||| | ||||||||||||| ||| ||||||| |||  ||||||||||||||||||||| |    
T  40498526 agatactccgtagataca-caaggatatttataagatacttcatatatacgtatcctaggaaaagatgaagagtataaaagtgagacaatgttgtaaaca 40498624  T
Q  271 tttagtagaaatgtatacgaatcaattt 298  Q
    || |||||| |||||||||| |||||||    
T  40498625 ttcagtagagatgtatacgattcaattt 40498652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 398 - 470
Target Start/End: Original strand, 8948347 - 8948419
Alignment:
Q  398 tatataagttttagtataaattttttgttaacgtatcttagccgtatcgtatcctaaattttaaaaattttgc 470  Q
    |||||||||||||||||||||||||||||||||||||||||  ||||| ||||||||||||||||| ||||||    
T  8948347 tatataagttttagtataaattttttgttaacgtatcttagttgtatcatatcctaaattttaaaatttttgc 8948419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 156 - 355
Target Start/End: Original strand, 17328636 - 17328835
Alignment:
Q  156 ttatctgatacgtatagaatattccacagatacaacaaggatacttataagatatttcacaaatacgtatcctag-aaatgatgaagggtaagaaagtga 254  Q
    ||||| ||||| ||||  ||| |||| ||||||| ||| ||||||||||||||| |||||| ||| ||||||||| ||| ||||||| |||  |||||||    
T  17328636 ttatcggatacttatatgatactccatagataca-caatgatacttataagatacttcacatatatgtatcctaggaaaagatgaagcgtagaaaagtga 17328734  T
Q  255 gacaatgttgtaaaaatttagtagaaatgtatacgaatcaattttagatatgaatctgtaaaattgtttctcgatgaactacttaaaattacacttattg 354  Q
    ||||| |||||||||||| || ||| ||||||| || ||||||||||||||| ||  ||  ||||||||| ||  |||| ||||||| ||| |||| |||    
T  17328735 gacaaggttgtaaaaattcaggagagatgtatatgattcaattttagatatgcattagtcgaattgtttcacggggaaccacttaaagttatacttcttg 17328834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 399 - 509
Target Start/End: Original strand, 36925885 - 36925993
Alignment:
Q  399 atataagttttagtataaattttttgttaacgtatcttagccgtatcgtatcctaaattttaaaaattttgcgtattcacgtatctgtatcgtatcgtac 498  Q
    |||||| ||||||||||||| |||| ||||||||||||||||| || |||||||||| ||||| ||||||||||||   |||| | ||||||||||||||    
T  36925885 atataaattttagtataaatattttattaacgtatcttagccg-attgtatcctaaa-tttaataattttgcgtatctgcgtacccgtatcgtatcgtac 36925982  T
Q  499 ccgcacccgta 509  Q
    | |||||||||    
T  36925983 ctgcacccgta 36925993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 375 - 464
Target Start/End: Original strand, 5591051 - 5591142
Alignment:
Q  375 ttattttcttcaagtgctttacata--tataagttttagtataaattttttgttaacgtatcttagccgtatcgtatcctaaattttaaaaa 464  Q
    |||||||||||||||  ||| ||||  |||||||||||||||||||||||| ||||| ||||||| ||| ||||||||||||||||| ||||    
T  5591051 ttattttcttcaagtaatttgcataaatataagttttagtataaattttttattaacatatcttaaccgcatcgtatcctaaatttttaaaa 5591142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 196 - 325
Target Start/End: Original strand, 2788872 - 2789001
Alignment:
Q  196 atacttataagatatttcacaaatacgtatcctagaaatgatgaagggtaagaaagtgagacaatgttgtaaaaatttagtagaaatgtatacgaatcaa 295  Q
    ||||||||| |||| |||||| |||| |||| |||||| |||||| | ||| ||||||||||||| |||| ||| |||| | ||||||||||  | ||||    
T  2788872 atacttatatgatacttcacacatacatatcatagaaaagatgaatgttaaaaaagtgagacaatattgtgaaagtttaatggaaatgtatatcattcaa 2788971  T
Q  296 ttttagatatgaatctgtaaaattgtttct 325  Q
    ||||| ||||| ||  ||||||||||||||    
T  2788972 ttttaaatatgcattagtaaaattgtttct 2789001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 196 - 342
Target Start/End: Original strand, 3353078 - 3353228
Alignment:
Q  196 atacttataagatatttcacaaatacgtatcct----agaaatgatgaagggtaagaaagtgagacaatgttgtaaaaatttagtagaaatgtatacgaa 291  Q
    ||||||||||||||||||||||| ||||||| |    | |||  |||||| || | |||||||||| ||||||| |||||||| | |||||||||| ||     
T  3353078 atacttataagatatttcacaaagacgtatcttgaaaaaaaaaaatgaagagtcaaaaagtgagactatgttgtgaaaatttaatggaaatgtatatgat 3353177  T
Q  292 tcaattttagatatgaatctgtaaaattgtttctcgatgaactacttaaaa 342  Q
    ||||||| |||||||||||  || |||||||| ||||| ||| | ||||||    
T  3353178 tcaatttaagatatgaatcattataattgtttttcgattaaccagttaaaa 3353228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 190 - 287
Target Start/End: Original strand, 35428727 - 35428824
Alignment:
Q  190 acaaggatacttataagatatttcacaaatacgtatcctagaaatgatgaagggtaagaaagtgagacaatgttgtaaaaatttagtagaaatgtata 287  Q
    ||||||||||||| |||||| |||||| ||||||||| || ||| |||||||||||| |||||||||||||| | | |||||| ||| || |||||||    
T  35428727 acaaggatacttagaagatacttcacacatacgtatcttacaaaagatgaagggtaaaaaagtgagacaatgatctgaaaattcagtggagatgtata 35428824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 48 - 272
Target Start/End: Original strand, 38140401 - 38140627
Alignment:
Q  48 atactgcaaaatggaaacgtacccgtatcgaataccgatacttcatggatacttgcggatacgtacccacgaagtatcataattaattattttaaatttt 147  Q
    ||||| ||||| ||| ||||||| |||||  ||||||||| |||| ||||  | || |||| ||| | | ||||||||| ||||||||||||||| ||||    
T  38140401 atactccaaaacggagacgtaccagtatcagataccgatatttcacggatgttcgctgatatgtatcaatgaagtatcaaaattaattattttaattttt 38140500  T
Q  148 aatc--ttttttatctgatacgtatagaatattccacagatacaacaaggatacttataagatatttcacaaatacgtatccta-gaaatgatgaagggt 244  Q
    |||   | ||||||| ||||  |||   ||| |||||| ||||| ||| |||| ||  |||||| |||||| |||||||||||| |||| ||||||| ||    
T  38140501 aataaatattttatcggatatttatgtgatactccacacataca-caatgatatttccaagatacttcacatatacgtatcctaagaaaagatgaagagt 38140599  T
Q  245 aagaaagtgagacaatgttgtaaaaatt 272  Q
    || || ||||||||||||||||| ||||    
T  38140600 aaaaatgtgagacaatgttgtaagaatt 38140627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 372 - 505
Target Start/End: Complemental strand, 38595853 - 38595719
Alignment:
Q  372 tgcttattttcttcaagtgctttacatatata--agttttagtataaattttttgttaacgtatcttagccgtatcgtatcctaaattttaaaaattttg 469  Q
    |||||||| |||||||||  |||||| | |||  ||||||||||||||  |||||| || |||||||| ||||||||||||||||| |||||||| || |    
T  38595853 tgcttattatcttcaagtattttacacacatatgagttttagtataaaaattttgtcaatgtatcttaaccgtatcgtatcctaaa-tttaaaaagttcg 38595755  T
Q  470 cgtattcacgtatctgtatcgtatcgtacccgcacc 505  Q
    ||||| | |||| |  |||| |||||||||||||||    
T  38595754 cgtatccgcgtacccatatcatatcgtacccgcacc 38595719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 406 - 494
Target Start/End: Complemental strand, 43344642 - 43344555
Alignment:
Q  406 ttttagtataaattttttgttaacgtatcttagccgtatcgtatcctaaattttaaaaattttgcgtattcacgtatctgtatcgtatc 494  Q
    ||||||||||||| |||||||| ||||||||||  ||||||||  |||| |||||||||||| |||||||| | |||||||||||||||    
T  43344642 ttttagtataaatattttgttagcgtatcttagttgtatcgtagtctaa-ttttaaaaatttcgcgtattcgcatatctgtatcgtatc 43344555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 71 - 150
Target Start/End: Complemental strand, 42795022 - 42794943
Alignment:
Q  71 cgtatcgaataccgatacttcatggatacttgcggatacgtacccacgaagtatcataattaattattttaaattttaat 150  Q
    ||||| ||||||||||||| || ||||||| ||||||||||| ||| ||||||||| |||| |||||||||| |||||||    
T  42795022 cgtatggaataccgatactccacggatactcgcggatacgtatccatgaagtatcagaattgattattttaatttttaat 42794943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 400 - 474
Target Start/End: Original strand, 14749645 - 14749718
Alignment:
Q  400 tataagttttagtataaattttttgttaacgtatcttagccgtatcgtatcctaaattttaaaaattttgcgtat 474  Q
    ||||| |||||||||||||  ||| |||||||||||||  ||||||||||||| |||||||||||||||||||||    
T  14749645 tataaattttagtataaataatttcttaacgtatcttactcgtatcgtatcct-aattttaaaaattttgcgtat 14749718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 355 - 464
Target Start/End: Original strand, 41324216 - 41324324
Alignment:
Q  355 taatgaagggtaattagtgcttattttcttcaagtgctttacata--tataagttttagtataaattttttgttaacgtatcttagccgtatcgtatcct 452  Q
    |||||||||||||| | || ||||||| |||||||  ||||||||  |||||||||||  |||   ||||| ||||||||||||| ||||||| ||||||    
T  41324216 taatgaagggtaatcaatgtttattttgttcaagtattttacatacatataagttttatcata---ttttttttaacgtatcttaaccgtatcatatcct 41324312  T
Q  453 aaattttaaaaa 464  Q
    ||||||||||||    
T  41324313 aaattttaaaaa 41324324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 211 - 304
Target Start/End: Original strand, 44364254 - 44364347
Alignment:
Q  211 ttcacaaatacgtatcctagaaatgatgaagggtaagaaagtgagacaatgttgtaaaaatttagtagaaatgtatacgaatcaattttagata 304  Q
    |||| ||||| || || |||||| |||||||||||| ||||||||| | ||||||||||||| |||||| |||| ||||  |||||||||||||    
T  44364254 ttcataaatatgtgtcttagaaaagatgaagggtaaaaaagtgagatagtgttgtaaaaattcagtagagatgtgtacggttcaattttagata 44364347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 375 - 517
Target Start/End: Original strand, 17329059 - 17329207
Alignment:
Q  375 ttattttcttcaagtgctttacatata--taagttttagtataaattttttgttaacgtatcttagccgtatcgtatcctaaattttaaaaattttgcgt 472  Q
    |||||||||||||||  || ||||| |  ||||||||||||||||   |||||||||||||||  || |||||||||||||||||| ||||| || | ||    
T  17329059 ttattttcttcaagtatttcacatacaaataagttttagtataaaaaatttgttaacgtatctcggctgtatcgtatcctaaatttaaaaaaattcgtgt 17329158  T
Q  473 attc----acgtatctgtatcgtatcgtacccgcacccgtatctgtatc 517  Q
    || |     |||| | ||||||||||||||||||||  |||||||||||    
T  17329159 atccgcgtgcgtacccgtatcgtatcgtacccgcacttgtatctgtatc 17329207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 227 - 355
Target Start/End: Complemental strand, 38558769 - 38558643
Alignment:
Q  227 ctagaaatgatgaagggtaagaaagtgagacaatgttgtaaaaatttagtagaaatgtatacgaatcaattttagatatgaatctgtaaaattgtttctc 326  Q
    ||||||| |||||| ||||| |||||||||||  ||||| |||||||| |  | || ||| ||| ||||||||||||||  ||| ||| |||||||||||    
T  38558769 ctagaaaagatgaaaggtaaaaaagtgagacagagttgtgaaaatttattgaagatatat-cgattcaattttagatatatatcagtataattgtttctc 38558671  T
Q  327 gatgaactacttaaaattacacttattgt 355  Q
    | ||||| |||||||||||||||| ||||    
T  38558670 g-tgaaccacttaaaattacacttcttgt 38558643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 355 - 499
Target Start/End: Complemental strand, 30382610 - 30382465
Alignment:
Q  355 taatgaagggtaattagtgcttattttcttcaagtgctttacatatata--agttttagtataaattttttgttaacgtatcttagccgtatcgtatcct 452  Q
    |||| ||| ||||||| | ||||||||||||| ||  |||||| | |||  ||||||| |||||   |||||| ||||||| ||||||||||||||| ||    
T  30382610 taataaagagtaattaatacttattttcttcatgtaatttacacacatatgagttttaatataataattttgtcaacgtattttagccgtatcgtattct 30382511  T
Q  453 aaattttaaaaattttgcgtattcacgtatctgtatcgtatcgtacc 499  Q
    ||||||||||||  | | |||| |||||| | |||||||||||||||    
T  30382510 aaattttaaaaa-atcgtgtatccacgtacccgtatcgtatcgtacc 30382465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 79 - 233
Target Start/End: Complemental strand, 30383063 - 30382908
Alignment:
Q  79 ataccgatacttcatggatacttgcggatacgtacccacgaagtatcataattaattattttaaatttt--aatcttttttatctgatacgtatagaata 176  Q
    |||| |||||| || | ||||| ||||||||||||||||||||||||  | ||||||||||||| ||||  ||  | ||||||| ||||| ||||  |||    
T  30383063 atacagatactccacgaatactcgcggatacgtacccacgaagtatcggagttaattattttaatttttaaaaaatattttatcggatacatatatgata 30382964  T
Q  177 ttccacagatacaacaaggatacttataagatatttcacaaatacgtatcctagaaa 233  Q
     |||||| |||| |||| | | |||||||||| ||||||  |||||||||| |||||    
T  30382963 atccacaaatac-acaaaggtccttataagatttttcacttatacgtatcccagaaa 30382908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 33 - 89
Target Start/End: Original strand, 36925371 - 36925427
Alignment:
Q  33 acctatgaagtccgaatactgcaaaatggaaacgtacccgtatcgaataccgatact 89  Q
    |||||||||||||||||||| ||||||| | ||||||  ||||||||||||||||||    
T  36925371 acctatgaagtccgaatactccaaaatgaagacgtactagtatcgaataccgatact 36925427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 282 - 350
Target Start/End: Original strand, 40498676 - 40498744
Alignment:
Q  282 tgtatacgaatcaattttagatatgaatctgtaaaattgtttctcgatgaactacttaaaattacactt 350  Q
    |||||| || ||||||||||||||| |||  || |||||||||||||||||| ||||||||||| ||||    
T  40498676 tgtatatgattcaattttagatatgcatcactagaattgtttctcgatgaaccacttaaaattatactt 40498744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 71 - 142
Target Start/End: Original strand, 14749411 - 14749482
Alignment:
Q  71 cgtatcgaataccgatacttcatggatacttgcggatacgtacccacgaagtatcataattaattattttaa 142  Q
    ||||||| || |||||||| |  |||||||  |||||||||||||||| ||||||| |||||||||||||||    
T  14749411 cgtatcggattccgatactccgcggatactctcggatacgtacccacggagtatcagaattaattattttaa 14749482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 79 - 342
Target Start/End: Original strand, 26352443 - 26352705
Alignment:
Q  79 ataccgatacttcatggatacttgcggatacgtacccacgaagtatcataattaattattttaaattttaatcttt--tttatctgatacgtatagaata 176  Q
    ||||||||||||||  |||||| ||||||||||||||||  ||||||  ||||||||||||||| ||  ||| | |  |||||  ||||| ||||  |||    
T  26352443 ataccgatacttcacagatactcgcggatacgtacccactgagtatcggaattaattattttaatttaaaatatatattttattggatacttataagata 26352542  T
Q  177 ttccacagatacaacaaggatacttataagatatttcacaaatacgtatcctagaaatgatgaagggtaagaaagtgagacaatgttgtaaaaatttagt 276  Q
     || | | ||||| ||   |||||||||||||| |||||| | |||||||||| |||  ||||| ||||| |||||||| |  | |||| |||||| | |    
T  26352543 ctcgataaataca-cacatatacttataagatacttcacataaacgtatcctaaaaa--atgaaaggtaaaaaagtgagtctgttttgtgaaaattcaat 26352639  T
Q  277 agaaatgtatacgaatcaattttagatatgaatctgtaaaattgtttctcgatgaactacttaaaa 342  Q
     || |||| || || ||||||| |||||||| ||  || |||||||||||||| ||| | ||||||    
T  26352640 ggagatgtgtatgattcaatttaagatatgagtcactataattgtttctcgattaaccaattaaaa 26352705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 399 - 509
Target Start/End: Original strand, 3353485 - 3353595
Alignment:
Q  399 atataagttttagtataaattttttgttaacgtatcttagccgtatcgtatcctaaattttaaaaattttgcgtattcacgtatctgtatcgtatcgtac 498  Q
    |||||| |||||| |||||| |||| || || ||||||||  ||||| |||||| |||||||| | ||| |||||| ||| || | |||||||| |||||    
T  3353485 atataaattttagcataaatattttctttacatatcttagttgtatcatatcctgaattttaatattttcgcgtatccacatacccgtatcgtaccgtac 3353584  T
Q  499 ccgcacccgta 509  Q
    |||||| ||||    
T  3353585 ccgcactcgta 3353595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 355 - 446
Target Start/End: Complemental strand, 11562071 - 11561978
Alignment:
Q  355 taatgaagggtaattagtgcttattttcttcaagtgctttacat--atataagttttagtataaattttttgttaacgtatcttagccgtatcg 446  Q
    |||||||||||||| | ||||||||||||||||||  |||| ||  |||||||| |||||||| |  |||||||||  ||||||| ||||||||    
T  11562071 taatgaagggtaatcaatgcttattttcttcaagtattttatatacatataagtgttagtatacaaattttgttaatatatcttaaccgtatcg 11561978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 35 - 140
Target Start/End: Original strand, 35428582 - 35428688
Alignment:
Q  35 ctatgaagtccgaatactgcaaa-atggaaacgtacccgtatcgaataccgatacttcatggatacttgcggatacgtacccacgaagtatcataattaa 133  Q
    |||||||||||  ||||| |||| | ||| ||||||| |||||| ||||||||||| |||  ||||| ||  |||||||| |||||||||| | ||||||    
T  35428582 ctatgaagtccagatactccaaatacggagacgtacctgtatcggataccgatactccatatatactcgcaaatacgtactcacgaagtattaaaattaa 35428681  T
Q  134 ttatttt 140  Q
    |||||||    
T  35428682 ttatttt 35428688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 222 - 299
Target Start/End: Original strand, 18561094 - 18561171
Alignment:
Q  222 gtatcctagaaatgatgaagggtaagaaagtgagacaatgttgtaaaaatttagtagaaatgtatacgaatcaatttt 299  Q
    |||||||| |||  |||||| |||| |||||||||||||||| | |||||| ||| |||||||||| || ||||||||    
T  18561094 gtatcctataaaacatgaagagtaaaaaagtgagacaatgttttgaaaattcagtggaaatgtatatgattcaatttt 18561171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 399 - 511
Target Start/End: Original strand, 11458169 - 11458280
Alignment:
Q  399 atataagttttagtataaattttttgttaacgtatcttagccgtatcgtatcctaaattttaaaaattttgcgtattcacgtatctgtatcgtatcgtac 498  Q
    ||||||||||| |||||||    ||||||| |||| |||| ||||||||||| | |||||| ||| ||||||||||| || |||  |||||||||| |||    
T  11458169 atataagtttttgtataaaaaaattgttaatgtattttagtcgtatcgtatcttcaatttt-aaatttttgcgtatttacttattcgtatcgtatcatac 11458267  T
Q  499 ccgcacccgtatc 511  Q
    || ||| ||||||    
T  11458268 ccacactcgtatc 11458280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 401 - 519
Target Start/End: Original strand, 38141972 - 38142082
Alignment:
Q  401 ataagttttagtataaattttttgttaacgtatcttagccgtatcgtatcctaaattttaaaaattttgcgtattcacgtatctgtatcgtatcgtaccc 500  Q
    |||||||||| |||||||||||  |||||||||| || | ||||| |||||||||||| |||||        | ||||||||| |||| ||||| |||||    
T  38141972 ataagttttattataaattttta-ttaacgtatcctaacggtatcatatcctaaatttaaaaaaa-------aatcacgtatccgtattgtatcttaccc 38142063  T
Q  501 gcacccgtatctgtatctg 519  Q
    ||||||||||| |||||||    
T  38142064 gcacccgtatccgtatctg 38142082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 35 - 142
Target Start/End: Original strand, 18858273 - 18858380
Alignment:
Q  35 ctatgaagtccgaatactgcaaaatggaaacgtacccgtatcgaataccgatacttcatggatacttgcggatacgtacccacgaagtatcataattaat 134  Q
    |||||||||| ||||||| |||||||||  |||||  |||||| ||| ||||||| || ||||||| ||||  |   || ||| |||||||| |||||||    
T  18858273 ctatgaagtctgaatacttcaaaatggaggcgtacatgtatcggatatcgatactccacggatactcgcgggcaaacactcacaaagtatcaaaattaat 18858372  T
Q  135 tattttaa 142  Q
    ||||||||    
T  18858373 tattttaa 18858380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 190 - 304
Target Start/End: Original strand, 40363774 - 40363889
Alignment:
Q  190 acaaggatacttataagatatttcacaaatacgtatcctagaaat-gatgaagggtaagaaagtgagacaatgttgtaaaaatttagtagaaatgtatac 288  Q
    |||| ||||||| ||| ||| |||||| |||| |||||||||||  ||  ||| | || ||||||||||||||||||||| ||| |||| | |||| ||     
T  40363774 acaatgatacttttaaaatacttcacagatacttatcctagaaaaagaaaaagagcaaaaaagtgagacaatgttgtaaacattcagtaaagatgtgtat 40363873  T
Q  289 gaatcaattttagata 304  Q
    || |||||||||||||    
T  40363874 gattcaattttagata 40363889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 355 - 449
Target Start/End: Complemental strand, 37272711 - 37272614
Alignment:
Q  355 taatgaagggtaattagtgcttattttcttcaagtgctttacata--tataagttttagtataaattttttgttaacgtatcttagcc-gtatcgtat 449  Q
    |||||||| ||||| | || | ||||| |||||||  ||||||||  ||||| ||||  |||||||||||||||||||||||||| || |||||||||    
T  37272711 taatgaagagtaatcaatgttcatttttttcaagtattttacatacatataaatttttatataaattttttgttaacgtatcttaacctgtatcgtat 37272614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 235 - 300
Target Start/End: Original strand, 21812979 - 21813044
Alignment:
Q  235 gatgaagggtaagaaagtgagacaatgttgtaaaaatttagtagaaatgtatacgaatcaatttta 300  Q
    ||||||| |||| ||||||||||||||||||| ||||| | | |||||| ||| || |||||||||    
T  21812979 gatgaagagtaaaaaagtgagacaatgttgtataaattcaatggaaatgaatatgattcaatttta 21813044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 105; Significance: 4e-52; HSPs: 43)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 105; E-Value: 4e-52
Query Start/End: Original strand, 45 - 363
Target Start/End: Original strand, 25429837 - 25430159
Alignment:
Q  45 cgaatactgcaaaatggaaacgtacccgtatcga-ataccgatacttcatggatacttgcggatacgtacccacgaagtatcataattaattattttaaa 143  Q
    |||||||| ||||| ||| ||||||||||||||  ||||| ||||| || ||||||| ||||||||||||||| ||||||||| |||||||||||||||     
T  25429837 cgaatactacaaaacggagacgtacccgtatcgggataccaatactccacggatactcgcggatacgtacccatgaagtatcagaattaattattttaat 25429936  T
Q  144 ttttaatc--ttttttatctgatacgtatagaatattccacagatacaacaaggatacttataagatatttcacaaatacgtatcctagaaat-gatgaa 240  Q
    ||||||    | | |||   ||||| ||||  ||| |||||||||||| ||||||||||||||||||| ||| || ||| ||||||||||||  ||||||    
T  25429937 ttttaaaaaatatattaatggatacttatatgataatccacagataca-caaggatacttataagatacttcgcatatatgtatcctagaaaaagatgaa 25430035  T
Q  241 gggtaagaaagtgagacaatgttgtaaaaatttagtagaaatgtatacgaatcaattttagatatgaatctgtaaaattgtttctcgatgaactacttaa 340  Q
    |||||| ||||||||||||||||||||||||| |  | | || |||| || ||||||||||||||| ||  ||| ||||||||| |||||||| ||||||    
T  25430036 gggtaaaaaagtgagacaatgttgtaaaaattcatgacagatatatatgattcaattttagatatgcattagtagaattgtttcacgatgaaccacttaa 25430135  T
Q  341 aattacacttattgt-aatgaagg 363  Q
    ||||| |||| |||| ||||||||    
T  25430136 aattatacttcttgtgaatgaagg 25430159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 35 - 363
Target Start/End: Complemental strand, 24889085 - 24888754
Alignment:
Q  35 ctatgaagtccgaatactgcaaaatggaaacgtacccgtatcgaataccgatacttcatggatacttgcggatacgtacccacgaagtatcataattaat 134  Q
    ||||||||  |||||||| ||||| ||| |||||||||||||| ||||| ||| | || ||||||| ||||||||||||||| ||||||||| |||||||    
T  24889085 ctatgaagctcgaatactacaaaacggagacgtacccgtatcggataccaatattccacggatactcgcggatacgtacccatgaagtatcagaattaat 24888986  T
Q  135 tattttaaattttaatc--ttttttatctgatacgtatagaatattccacagatacaacaaggatacttataagatatttcacaaatacgtatcctagaa 232  Q
    |||||||| ||||||    | | ||||  ||||| ||||  ||| |||||| ||| | ||||||||||||||||||| ||| || ||| |||||||| ||    
T  24888985 tattttaatttttaaaaaatatattattggatacttatatgatactccacaaataga-caaggatacttataagatacttcgcatatatgtatcctaaaa 24888887  T
Q  233 at-gatgaagggtaagaaagtgagacaatgttgtaaaaatttagtagaaatgtatacgaatcaattttagatatgaatctgtaaaattgtttctcgatga 331  Q
    |  ||||||||||||  |||||||||||| ||||||||||| |  | |||| |||| || ||||||||||||||| ||  ||| ||||||||| || |||    
T  24888886 aaagatgaagggtaaacaagtgagacaatattgtaaaaattcatgacaaatatatatgattcaattttagatatgcattagtagaattgtttcacggtga 24888787  T
Q  332 actacttaaaattacacttattgt-aatgaagg 363  Q
    || ||||||||||| |||| |||| ||||||||    
T  24888786 accacttaaaattatacttcttgtgaatgaagg 24888754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 79 - 355
Target Start/End: Complemental strand, 11789646 - 11789368
Alignment:
Q  79 ataccgatacttcatggatacttgcggatacgtacccacgaagtatcataattaattattttaaattttaatc--ttttttatctgatacgtatagaata 176  Q
    ||||||||||| || ||||||| ||||||||||| ||||||||||||| ||||||||||||||| |||||||   | ||||||| ||||| | |   |||    
T  11789646 ataccgatactccacggatactcgcggatacgtatccacgaagtatcagaattaattattttaatttttaataaatattttatcggatacttgtgtgata 11789547  T
Q  177 ttccacagatacaacaaggatacttataagatatttcacaaatacgtatcctagaaat-gatgaagggtaagaaagtgagacaatgttgtaaaaatttag 275  Q
     |||||| ||||| ||| |||||||  |||||| |||||| | || |||||||||||  ||||||| |||||||||||||||||||||||||||||| |     
T  11789546 ctccacaaataca-caatgatacttccaagatacttcacagacacatatcctagaaaaagatgaagagtaagaaagtgagacaatgttgtaaaaattcat 11789448  T
Q  276 tagaaatgtatacgaatcaattttagatatgaatctgtaaaattgtttctcgatgaactacttaaaattacacttattgt 355  Q
    || | ||||||| || ||||||||||||||| |||  || || ||||||||||||||  ||||||||||| |||| ||||    
T  11789447 tatagatgtatatgactcaattttagatatgcatcaatagaactgtttctcgatgaaacacttaaaattatacttcttgt 11789368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 86; E-Value: 8e-41
Query Start/End: Original strand, 365 - 531
Target Start/End: Complemental strand, 23877289 - 23877122
Alignment:
Q  365 taattagtgcttattttcttcaagtgctttacata--tataagttttagtataaattttttgttaacgtatcttagccgtatcgtatcctaaattttaaa 462  Q
    |||||| || |||||||||||||||  ||||| ||  |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  23877289 taattaatgtttattttcttcaagtattttacttacatataagttgtagtataaattttttgttaacgtatcttagccgtatcgtatcctaaattttgaa 23877190  T
Q  463 aattttgcgtattcacgtatctgtatcgtatcgtacccgcacccgtatctgtatctgggcttcataggc 531  Q
    ||  | ||||||   |||||| |||||||||| || ||||||||||||||||||| |||||||||||||    
T  23877189 aaactagcgtatctgcgtatccgtatcgtatc-tatccgcacccgtatctgtatccgggcttcataggc 23877122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 103 - 345
Target Start/End: Original strand, 6166309 - 6166552
Alignment:
Q  103 cggatacgtacccacgaagtatcataattaattattttaaattttaatc--ttttttatctgatacgtatagaatattccacagatacaacaaggatact 200  Q
    ||||||||||| |||||||||||||| ||||||||||||| |||||||   | ||||||| ||||| |||   ||| || ||| ||||| |||||||| |    
T  6166309 cggatacgtacgcacgaagtatcata-ttaattattttaatttttaataaatattttatcggatacttatgtgatactctacatataca-caaggatatt 6166406  T
Q  201 tataagatatttcacaaatacgtatcctagaaatg-atgaagggtaagaaagtgagacaatgttgtaaaaatttagtagaaatgtatacgaatcaatttt 299  Q
    | ||||||| || | | ||||||||||||||||   |||||| |||| ||||||||||||||||||||||||| | || ||||||||| || ||||||||    
T  6166407 tctaagatactttatagatacgtatcctagaaaaacatgaagagtaaaaaagtgagacaatgttgtaaaaattcattataaatgtatatgattcaatttt 6166506  T
Q  300 agatatgaatctgtaaaattgtttctcgatgaactacttaaaatta 345  Q
    ||||||| ||| ||| ||||| |||||||||||  |||||||||||    
T  6166507 agatatgcatcagtataattgattctcgatgaaacacttaaaatta 6166552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 64 - 351
Target Start/End: Original strand, 12006553 - 12006837
Alignment:
Q  64 acgtacccgtatcgaataccgatacttcatggatacttgcggatacgtacccacgaagtatcataattaattattttaaattttaatcttttttatctga 163  Q
    ||||| || ||||| ||||||||| ||||||||||||  |||||||| ||||||||||||||| |||||| |||||||| ||| ||      ||||| ||    
T  12006553 acgtatccatatcggataccgatatttcatggatactctcggatacgaacccacgaagtatcagaattaaatattttaa-tttaaaaaaaaattatcgga 12006651  T
Q  164 tacgtatagaatattccacagatacaacaaggatacttataagatatttcacaaatacgtatcctagaaatgatgaagggtaagaaagtgagacaatgtt 263  Q
    ||| ||||| ||| |||||| ||||| ||  | ||||||||||||||||| || ||||| ||||||||||  || |||||| | |||||| |||||||||    
T  12006652 tacttataggatactccacaaatacaccagtg-tacttataagatatttcccatatacgcatcctagaaaaaataaagggtgaaaaagtg-gacaatgtt 12006749  T
Q  264 gtaaaaatttagtagaaatgtatacgaatcaattttagatatgaatctgtaaaattgtttctcgatgaactacttaaaattacactta 351  Q
    || |||||| ||| || ||||||| || ||||||||||||||| |||  || |||||||| | |||||||  |||||||||| |||||    
T  12006750 gtgaaaattcagtggagatgtatatgattcaattttagatatgcatcactagaattgttttttgatgaaccgcttaaaattatactta 12006837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 190 - 355
Target Start/End: Original strand, 32855981 - 32856146
Alignment:
Q  190 acaaggatacttataagatatttcacaaatacgtatcctagaaat-gatgaagggtaagaaagtgagacaatgttgtaaaaatttagtagaaatgtatac 288  Q
    |||| ||||||||||||||| |||||| ||||||||||||||||  ||||||| |||| |||| |||||||||||||||| ||| |||||| |||||||     
T  32855981 acaatgatacttataagatacttcacagatacgtatcctagaaaaagatgaagagtaaaaaagcgagacaatgttgtaaacattcagtagagatgtatat 32856080  T
Q  289 gaatcaattttagatatgaatctgtaaaattgtttctcgatgaactacttaaaattacacttattgt 355  Q
    || ||||||||||||||| |||  || |||||||||||||||||| |||||||| || |||| ||||    
T  32856081 gattcaattttagatatg-atcactagaattgtttctcgatgaaccacttaaaactatacttcttgt 32856146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 71 - 355
Target Start/End: Original strand, 9409774 - 9410058
Alignment:
Q  71 cgtatcgaataccgatacttcatggatacttgcggatacgtacccacgaagtatcataattaattattttaaattttaat--cttttttatctgatacgt 168  Q
    ||||||| ||||||||||| || |||||||  |||||||||| ||||||||||||||||||||||||||||| |||||||   | | ||||| ||||| |    
T  9409774 cgtatcggataccgatactccacggatactcacggatacgtatccacgaagtatcataattaattattttaatttttaataaatatgttatcggatactt 9409873  T
Q  169 atagaatattccacagatacaacaaggatacttataagatatttcacaaatacgtatcctag-aaatgatgaagggtaagaaagtgagacaatgttgtaa 267  Q
    || | ||| ||||||||||| |||||||||||| ||||||| |||| | | | ||||||||| |||  |||||| |||| ||||| ||||  | ||||||    
T  9409874 atgggatactccacagatac-acaaggatacttctaagatacttcagagacatgtatcctagaaaaaaatgaagagtaaaaaagtaagac--ttttgtaa 9409970  T
Q  268 aaatttagtagaaatgtatacgaatcaattttagatatgaatctgtaaaattgtttctcgatgaactacttaaaattacacttattgt 355  Q
    ||||| | || | ||||||| || ||||||||| ||||  |||  || |||| ||||||||||||  ||||||||||| |||| ||||    
T  9409971 aaattcattatagatgtatatgactcaattttacatattcatcaatagaattatttctcgatgaaacacttaaaattatacttcttgt 9410058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 95 - 332
Target Start/End: Original strand, 13003232 - 13003466
Alignment:
Q  95 gatacttgcggatacgtacccacgaagtatcataattaattattttaaattttaatctt-ttttatctgatacgtatagaatattccacagatacaacaa 193  Q
    |||||| |||||||||||||||| |||||||||||||||||||||||| ||| ||   | |||||||| |||| ||||  ||| |||| |||| || |||    
T  13003232 gatactcgcggatacgtacccacaaagtatcataattaattattttaattttaaaaaatattttatctaatacttatatgatactccatagattca-caa 13003330  T
Q  194 ggatacttataagatatttcacaaatacgtatcctagaaatgatgaagggtaagaaagtgagacaatgttgtaaaaatttagtagaaatgtatacgaatc 293  Q
     |||||||| ||||||||||||| ||| | ||| ||||||  |||||| |||| ||||||||||||||||||| ||||| | ||||  |||||| || ||    
T  13003331 agatacttacaagatatttcacatatatgcatcgtagaaaatatgaagtgtaa-aaagtgagacaatgttgtagaaattcaataga--tgtatatgattc 13003427  T
Q  294 aattttagatatgaatctgtaaaattgtttctcgatgaa 332  Q
    ||||||||||||| ||   || |||||||||||||||||    
T  13003428 aattttagatatgcataactagaattgtttctcgatgaa 13003466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 190 - 345
Target Start/End: Complemental strand, 18928721 - 18928566
Alignment:
Q  190 acaaggatacttataagatatttcacaaatacgtatcctagaaatgatgaagggtaagaaagtgagacaatgttgtaaaaatttagtagaaatgtatacg 289  Q
    |||| ||||||||||||||| || ||| |||| |||||||||||  |||| | |||| ||| ||||||||||||||||||||| | | || ||||||| |    
T  18928721 acaatgatacttataagatactttacatatacttatcctagaaaatatgaggagtaaaaaattgagacaatgttgtaaaaattgaattgagatgtatatg 18928622  T
Q  290 aatcaattttagatatgaatctgtaaaattgtttctcgatgaactacttaaaatta 345  Q
    | ||||||||||||||| ||| ||| |||||||||||||||||| |||||||||||    
T  18928621 attcaattttagatatgcatcagtagaattgtttctcgatgaaccacttaaaatta 18928566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 399 - 529
Target Start/End: Complemental strand, 17748558 - 17748432
Alignment:
Q  399 atataagttttagtataaattttttgttaacgtatcttagccgtatcgtatcctaaattttaaaaattttgcgtattcacgtatctgtatcgtatcgtac 498  Q
    ||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||| |||| ||||||||| | | || | |    |||||||||    
T  17748558 atataagttttagtataaattttttgttaacttatcttagccgtattgtatcctaaattttgaaaaatttgcgtatccgcatacccg----gtatcgtac 17748463  T
Q  499 ccgcacccgtatctgtatctgggcttcatag 529  Q
    ||||||||||||| ||||| ||| |||||||    
T  17748462 ccgcacccgtatccgtatccgggattcatag 17748432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 35 - 323
Target Start/End: Complemental strand, 17749215 - 17748925
Alignment:
Q  35 ctatgaagtccgaatactgcaaaatggaaacgtacccgtatcgaataccgatacttcatggatacttgcggatacgtacccacgaagtatcataattaat 134  Q
    |||||||| ||| |||||   |||| || |||||||  ||||| ||||||||||| ||  |||| ||||||||||| |||||||||||| || |||||||    
T  17749215 ctatgaagcccggatactctgaaattgagacgtacctatatcggataccgatactccacagatatttgcggatacgcacccacgaagtaacagaattaat 17749116  T
Q  135 tattttaaattttaatc--ttttttatctgatacgtatagaatattccacagatacaacaaggatacttataagatatttcacaaatacgtatcctag-a 231  Q
    ||||| || ||||||    | ||||| | ||||| ||||  ||| | | |||||||| || |||||||||||||||| |||||||||||||||||||| |    
T  17749115 tatttaaatttttaaaaaatattttaacggatacttatacgatacttcgcagataca-catggatacttataagatacttcacaaatacgtatcctagaa 17749017  T
Q  232 aatgatgaagggtaagaaagtgagacaatgttgtaaaaatttagtagaaatgtatacgaatcaattttagatatgaatctgtaaaattgttt 323  Q
    ||  | |||| |||| |||||||||||| |||||| | ||| |||||| ||||||| || |||||||  |||||| |||  || ||||||||    
T  17749016 aaatacgaagagtaaaaaagtgagacaacgttgtatacattcagtagagatgtatatgattcaatttatgatatgcatcactagaattgttt 17748925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 399 - 528
Target Start/End: Complemental strand, 11789130 - 11789003
Alignment:
Q  399 atataagttttagtataaattttttgttaacgtatcttagccgtatcgtatcctaaattttaaaaattttgcgtattcacgtatctgtatcgtatcgtac 498  Q
    |||||||||||| |||||| |||| ||||||||||| || ||||||||||||||||||||||||||||   |||||   |||| |||||| |||||||||    
T  11789130 atataagttttattataaaatttt-gttaacgtatcctaaccgtatcgtatcctaaattttaaaaattca-cgtatctgcgtacctgtattgtatcgtac 11789033  T
Q  499 ccgcacccgtatctgtatctgggcttcata 528  Q
    ||||||||||||| ||||| ||||||||||    
T  11789032 ccgcacccgtatccgtatcggggcttcata 11789003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 355 - 510
Target Start/End: Complemental strand, 16591225 - 16591071
Alignment:
Q  355 taatgaagggtaattagtgcttattttcttcaagtgctttacat--atataagttttagtataaattttttgttaacgtatcttagccgtatcgtatcct 452  Q
    |||||||| ||||| | | || |||||||||||||  |||||||  |||||||||||| |||||| ||||||||||||||||||| ||||||   | |||    
T  16591225 taatgaagagtaatcaatactgattttcttcaagtattttacatgcatataagttttattataaaatttttgttaacgtatcttaaccgtataaaaccct 16591126  T
Q  453 aaattttaaaaattttgcgtattcacgtatctgtatcgtatcgtacccgcacccgtat 510  Q
    ||||||||||||||| |||||  |||||||| ||||||||||||||| ||| ||||||    
T  16591125 aaattttaaaaatttcgcgta--cacgtatc-gtatcgtatcgtaccagcatccgtat 16591071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 399 - 501
Target Start/End: Complemental strand, 2813521 - 2813419
Alignment:
Q  399 atataagttttagtataaattttttgttaacgtatcttagccgtatcgtatcctaaattttaaaaattttgcgtattcacgtatctgtatcgtatcgtac 498  Q
    |||||| ||||| ||||||| ||||||||||  |||||||||||||||||||||||||||||||||||| |||||| | |||||| ||||| | ||||||    
T  2813521 atataaattttaatataaatattttgttaacacatcttagccgtatcgtatcctaaattttaaaaatttcgcgtatccgcgtatccgtatcatttcgtac 2813422  T
Q  499 ccg 501  Q
    |||    
T  2813421 ccg 2813419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 190 - 355
Target Start/End: Complemental strand, 23877553 - 23877387
Alignment:
Q  190 acaaggatacttataagatatttcacaaatacgtatcctagaaat-gatgaagggtaagaaagtgagacaatgttgtaaaaatttagtagaaatgtatac 288  Q
    |||| ||||||||||| ||| |||||| | || ||||||| |||  ||||||| ||||||||||||||  |||||||||| ||| |||||| || ||||     
T  23877553 acaatgatacttataaaatacttcacataaacatatcctacaaaaagatgaagagtaagaaagtgagatcatgttgtaaacattcagtagagatatatat 23877454  T
Q  289 gaatcaattttagatatgaatctgtaaaattgtttctcgatgaactacttaaaattacacttattgt 355  Q
    || ||||||||||||||| ||   || ||||||||  |||||||| ||||||||||| |||||||||    
T  23877453 gattcaattttagatatgcatgactagaattgttttccgatgaaccacttaaaattatacttattgt 23877387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 190 - 272
Target Start/End: Complemental strand, 24728715 - 24728632
Alignment:
Q  190 acaaggatacttataagatatttcacaaatacgtatcctagaaat-gatgaagggtaagaaagtgagacaatgttgtaaaaatt 272  Q
    |||||||||||||||||||| ||| || ||| ||||||||||||  |||||||||||| |||||||||||||||||||||||||    
T  24728715 acaaggatacttataagatacttcgcatatatgtatcctagaaaaagatgaagggtaaaaaagtgagacaatgttgtaaaaatt 24728632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 375 - 510
Target Start/End: Complemental strand, 24728328 - 24728192
Alignment:
Q  375 ttattttcttcaagtgctttacatata--taagttttagtataaattttttgttaacgtatcttagccgtatcgtatcctaaattttaaaaattttgcgt 472  Q
    |||||||||||||||  |||||||| |  |||||||||||||||||||||||||||| ||||| || | ||| |||||||||| |||||| | || | ||    
T  24728328 ttattttcttcaagtattttacatacaaataagttttagtataaattttttgttaacttatctcagacttattgtatcctaaa-tttaaataattcgtgt 24728230  T
Q  473 attcacgtatctgtatcgtatcgtacccgcacccgtat 510  Q
    || | |||||| |||| |||||||||||||||| ||||    
T  24728229 atccgcgtatccgtattgtatcgtacccgcacctgtat 24728192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 355 - 449
Target Start/End: Original strand, 13003567 - 13003663
Alignment:
Q  355 taatgaagggtaattagtgcttattttcttcaagtgctttacata--tataagttttagtataaattttttgttaacgtatcttagccgtatcgtat 449  Q
    |||||||| ||||| | || ||||||||||||| |  ||||||||  ||||||||||||||||||||||||||||||||||||||| ||||| ||||    
T  13003567 taatgaagagtaatcaatgtttattttcttcaaatattttacatacatataagttttagtataaattttttgttaacgtatcttaggcgtattgtat 13003663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 355 - 529
Target Start/End: Original strand, 9410189 - 9410366
Alignment:
Q  355 taatgaagggtaattagtgcttattttcttcaagtgctttacata--tataagttttagtataaattttttgttaacgtatcttagccgtatcgtatcct 452  Q
    |||||||| ||||| | || | |||||||||||||  ||| ||||  ||||||||||| ||||| |||||||||||||||||||| ||||||||||||||    
T  9410189 taatgaagagtaatcaatgttaattttcttcaagtatttttcatacatataagttttattataa-ttttttgttaacgtatcttaaccgtatcgtatcct 9410287  T
Q  453 aaatt--ttaaaaattttgcgtattcacgtatctgtatcgtatcgtacccgcacccgtatctgtatctgggcttcatag 529  Q
    |||||    |||||  | |||||| |  ||| | ||||||||||||||| |||||| |||| |||||  ||||||||||    
T  9410288 aaattaaaaaaaaaaatcgcgtatccgtgtacccgtatcgtatcgtaccagcacccctatccgtatcgaggcttcatag 9410366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 399 - 474
Target Start/End: Original strand, 37232148 - 37232223
Alignment:
Q  399 atataagttttagtataaattttttgttaacgtatcttagccgtatcgtatcctaaattttaaaaattttgcgtat 474  Q
    |||||| ||||| ||||||| ||||||||||||||||||||| ||||||||| | |||||||||||||| ||||||    
T  37232148 atataaattttaatataaatattttgttaacgtatcttagccatatcgtatcttgaattttaaaaatttcgcgtat 37232223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 372 - 499
Target Start/End: Complemental strand, 31431110 - 31430981
Alignment:
Q  372 tgcttattttcttcaagtgctttacat--atataagttttagtataaattttttgttaacgtatcttagccgtatcgtatcctaaattttaaaaattttg 469  Q
    ||||||||||||||||||  |||||||  ||||||||||||||||| |  |||| ||||||||| |||| |||||| | ||||||||||| |||||||||    
T  31431110 tgcttattttcttcaagtattttacatgcatataagttttagtatacaaattttattaacgtattttagtcgtatcatctcctaaattttcaaaattttg 31431011  T
Q  470 cgtattcacgtatctgtatcgtatcgtacc 499  Q
    | |||  ||||  |  ||||||||||||||    
T  31431010 catatgaacgtgcccatatcgtatcgtacc 31430981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 72 - 345
Target Start/End: Original strand, 11990590 - 11990863
Alignment:
Q  72 gtatcgaataccgatacttcatggatacttgcggatacgtacccacgaagtatcataattaattattttaaatttta-atcttttttatctgatacgtat 170  Q
    |||||| |||||||||||||| |||||||||| ||||||||| |||  ||||| | |||| |||||||||| ||||  |      ||||  ||||  |||    
T  11990590 gtatcggataccgatacttcacggatacttgctgatacgtactcacctagtattagaattgattattttaatttttttaaaaaaattattggatagttat 11990689  T
Q  171 agaatattccacagatacaacaaggatacttataagatatttcacaaatacgtatcctagaaatgatgaagggtaagaaagtgagacaatgttgtaaaaa 270  Q
    || ||| ||||  |||||| |||  |||||||||| ||| || | | |||| ||||||||||| |||||||||||  |||||| |||| |||||  ||||    
T  11990690 aggatactccatggataca-caaaaatacttataaaatacttaaaatatacatatcctagaaaagatgaagggtagaaaagtgtgacattgttgcgaaaa 11990788  T
Q  271 tttagtagaaatgtatacgaatcaattttagatatgaatctgtaaaattgtttctcgatgaactacttaaaatta 345  Q
    || ||| || |||||||  | ||||||||||||||| ||  ||| |||||||||| ||| ||| ||| |||||||    
T  11990789 ttcagtggatatgtatataactcaattttagatatgcattagtagaattgtttctagataaaccactaaaaatta 11990863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 399 - 481
Target Start/End: Original strand, 12007077 - 12007159
Alignment:
Q  399 atataagttttagtataaattttttgttaacgtatcttagccgtatcgtatcctaaattttaaaaattttgcgtattcacgta 481  Q
    ||||||| ||| |||||||   ||||||||||||||||||  |||||||||||||||||||||| | ||||||||| ||||||    
T  12007077 atataagatttggtataaaaaatttgttaacgtatcttagttgtatcgtatcctaaattttaaatagtttgcgtatccacgta 12007159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 79 - 233
Target Start/End: Complemental strand, 11755940 - 11755785
Alignment:
Q  79 ataccgatacttcatggatacttgcggatacgtacccacgaagtatcataattaattattttaaattttaatc--ttttttatctgatacgtatagaata 176  Q
    |||| ||||||| | |||||||   |||||||||  |||||||||| |||||||| |||||||| ||||||    | ||||||| ||||| ||||  |||    
T  11755940 atactgatactttacggatactcttggatacgtattcacgaagtattataattaaatattttaatttttaaaaaatattttatcggatacttataagata 11755841  T
Q  177 ttccacagatacaacaaggatacttataagatatttcacaaatacgtatcctagaaa 233  Q
    ||| ||||||| | || |||||||||||||||| |||||| |||| |||||||||||    
T  11755840 ttctacagatagacca-ggatacttataagatacttcacatatacatatcctagaaa 11755785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 412 - 493
Target Start/End: Complemental strand, 39296695 - 39296614
Alignment:
Q  412 tataaattttttgttaacgtatcttagccgtatcgtatcctaaattttaaaaattttgcgtattcacgtatctgtatcgtat 493  Q
    |||||||||||| |||| ||||||||| |||||| |||||||||||| ||||||||||| ||| ||| |||  |||||||||    
T  39296695 tataaattttttattaaggtatcttagtcgtatcatatcctaaatttaaaaaattttgcatatccacatattcgtatcgtat 39296614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 375 - 463
Target Start/End: Complemental strand, 11755495 - 11755405
Alignment:
Q  375 ttattttcttcaagtgctttacatat--ataagttttagtataaattttttgttaacgtatcttagccgtatcgtatcctaaattttaaaa 463  Q
    |||||||||||||||  |||||||    |||||||||| ||||||   ||||||||||||||||||| ||||| |||||||||||||||||    
T  11755495 ttattttcttcaagtattttacatgcgcataagttttaatataaaaaatttgttaacgtatcttagcagtatcatatcctaaattttaaaa 11755405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 399 - 510
Target Start/End: Original strand, 14180468 - 14180579
Alignment:
Q  399 atataagttttagtataaattttttgttaacgtatcttagccgtatcgtatcctaaattttaaaaattttgcgtattcacgtatctgtatcgtatcgtac 498  Q
    |||||| ||||||||||||| |||||||||||||||||||| | || ||||  ||||||||||||| ||| | ||| | |||| |  ||| |||||||||    
T  14180468 atataaattttagtataaatattttgttaacgtatcttagcagcattgtattttaaattttaaaaaatttacatatccgcgtacccatattgtatcgtac 14180567  T
Q  499 ccgcacccgtat 510  Q
     || ||||||||    
T  14180568 acgtacccgtat 14180579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 163 - 282
Target Start/End: Complemental strand, 16591642 - 16591524
Alignment:
Q  163 atacgtatagaatattccacagatacaacaaggatacttataagatatttcacaaatacgtatcctagaaatgatgaagggtaagaaagtgagacaatgt 262  Q
    |||| ||||||||| || |||| |||| ||| ||||||||||| ||| |||| || || |||||||| |||  || ||| |||| |||| ||||||||||    
T  16591642 atacttatagaatactctacagttaca-caaagatacttataaaatacttcaaaagtatgtatcctataaaaaattaagagtaaaaaagcgagacaatgt 16591544  T
Q  263 tgtaaaaatttagtagaaat 282  Q
    ||| |||||||||| |||||    
T  16591543 tgtgaaaatttagtggaaat 16591524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 399 - 465
Target Start/End: Complemental strand, 9136471 - 9136405
Alignment:
Q  399 atataagttttagtataaattttttgttaacgtatcttagccgtatcgtatcctaaattttaaaaat 465  Q
    |||||| |||||||||| || |||||||||||||| ||||  ||||| |||||| ||||||||||||    
T  9136471 atataaattttagtatatatattttgttaacgtattttagatgtatcatatcctgaattttaaaaat 9136405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 405 - 474
Target Start/End: Complemental strand, 24888518 - 24888449
Alignment:
Q  405 gttttagtataaattttttgttaacgtatcttagccgtatcgtatcctaaattttaaaaattttgcgtat 474  Q
    |||||||||||||   |||||||||||||||  | ||||||||||||||||||| ||||  |||||||||    
T  24888518 gttttagtataaaaaatttgttaacgtatctcggtcgtatcgtatcctaaatttaaaaagatttgcgtat 24888449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 193 - 233
Target Start/End: Original strand, 18320690 - 18320730
Alignment:
Q  193 aggatacttataagatatttcacaaatacgtatcctagaaa 233  Q
    ||||||||||||||||| |||||| ||||||||||||||||    
T  18320690 aggatacttataagatacttcacatatacgtatcctagaaa 18320730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 248 - 332
Target Start/End: Original strand, 18320731 - 18320814
Alignment:
Q  248 aaagtgagacaatgttgtaaaaatttagtagaaatgtatacgaatcaattttagatatgaatctgtaaaattgtttctcgatgaa 332  Q
    |||||||||||||||||| ||| |||||| || ||||||| || ||||||||||||||| ||  ||| || ||||||| ||||||    
T  18320731 aaagtgagacaatgttgtgaaa-tttagtggagatgtatatgattcaattttagatatgcataagtagaaatgtttcttgatgaa 18320814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 199 - 345
Target Start/End: Complemental strand, 31431544 - 31431397
Alignment:
Q  199 cttataagatatttcacaaatacgtatcctagaaatgatgaagggtaagaaagtgagacaatgttgtaaaaatttagtagaaatgtatacgaatcaatt- 297  Q
    ||||||||||| || | | |||| || |||||||| |||| ||| ||| | ||||||||||| ||||||||||| ||   | ||||||| || ||||||     
T  31431544 cttataagataatttagatatacataacctagaaaagatggaggataaaagagtgagacaatattgtaaaaattcagcgcagatgtatatgattcaatta 31431445  T
Q  298 ttagatatgaatctgtaaaattgtttctcgatgaactacttaaaatta 345  Q
    ||||||||| ||   || |||||||| | ||||||| |||||||||||    
T  31431444 ttagatatgtattaatagaattgttttttgatgaaccacttaaaatta 31431397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 375 - 459
Target Start/End: Original strand, 32856224 - 32856309
Alignment:
Q  375 ttattttcttcaagtgctttacata--tataagttttagtataaattttttgttaacgtatcttagccgtatcgtatcctaaatttt 459  Q
    ||||||| |||||||  ||||||||  |||||||||||| |||||    ||||||||||||||||| ||||||||||| ||||||||    
T  32856224 ttattttgttcaagtattttacatacatataagttttag-ataaaaaaattgttaacgtatcttagtcgtatcgtatcataaatttt 32856309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 195 - 345
Target Start/End: Complemental strand, 9136883 - 9136733
Alignment:
Q  195 gatacttataagatatttcacaaatacgtatcctagaaatgatgaagggtaagaaagtgagacaatgttgtaaaaatttagtagaaatgtatacgaatca 294  Q
    ||||||||||| ||| |||||| | ||||||||| ||||  ||||||||||| |||||||||   |||||| |||||| | | || |  |||| || |||    
T  9136883 gatacttataacatacttcacagagacgtatcctggaaaaaatgaagggtaaaaaagtgagattgtgttgtgaaaattcaatggagacatatatgattca 9136784  T
Q  295 attttagatatgaatctgtaaaattgtttctcgatgaactacttaaaatta 345  Q
    |||| | ||| |||||  || |||||||| ||||| ||| | |||||||||    
T  9136783 atttaaaataagaatcactataattgtttttcgattaaccaattaaaatta 9136733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 236 - 310
Target Start/End: Original strand, 37231784 - 37231858
Alignment:
Q  236 atgaagggtaagaaagtgagacaatgttgtaaaaatttagtagaaatgtatacgaatcaattttagatatgaatc 310  Q
    ||||||||||| |||||||||   |||||| |||||| | | || |||||||||| ||||||| |||||||||||    
T  37231784 atgaagggtaaaaaagtgagattgtgttgtgaaaattcaatggagatgtatacgattcaatttaagatatgaatc 37231858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 420 - 493
Target Start/End: Complemental strand, 31332346 - 31332273
Alignment:
Q  420 ttttgttaacgtatcttagccgtatcgtatcctaaattttaaaaattttgcgtattcacgtatctgtatcgtat 493  Q
    |||||| || ||||||||| |||||| |||| ||||||||||||| || | |||| ||| |||||| |||||||    
T  31332346 ttttgtcaaagtatcttagtcgtatcttatcttaaattttaaaaaattcgtgtatccacatatctgaatcgtat 31332273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 417 - 450
Target Start/End: Original strand, 32425396 - 32425429
Alignment:
Q  417 attttttgttaacgtatcttagccgtatcgtatc 450  Q
    ||||||| ||||||||||||||||||||||||||    
T  32425396 attttttattaacgtatcttagccgtatcgtatc 32425429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 105 - 142
Target Start/End: Original strand, 35536811 - 35536848
Alignment:
Q  105 gatacgtacccacgaagtatcataattaattattttaa 142  Q
    ||||||||| |||| |||||||||||||||||||||||    
T  35536811 gatacgtactcacggagtatcataattaattattttaa 35536848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 418 - 483
Target Start/End: Original strand, 36484458 - 36484523
Alignment:
Q  418 ttttttgttaacgtatcttagccgtatcgtatcctaaattttaaaaattttgcgtattcacgtatc 483  Q
    |||||| ||||||||||| |||||||||||||| | | |||| |||||||| |||||  |||||||    
T  36484458 ttttttattaacgtatctcagccgtatcgtatcttgatttttgaaaattttccgtatcgacgtatc 36484523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 431 - 503
Target Start/End: Original strand, 11991101 - 11991173
Alignment:
Q  431 tatcttagccgtatcgtatcctaaattttaaaaattttgcgtattcacgtatctgtatcgtatcgtacccgca 503  Q
    |||||||||| |||| |||| ||||||||||||||||  ||||| | | ||  ||||||||||| ||||||||    
T  11991101 tatcttagccatatcatatcttaaattttaaaaatttcacgtatccgcatacttgtatcgtatcatacccgca 11991173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 412 - 468
Target Start/End: Original strand, 13422647 - 13422703
Alignment:
Q  412 tataaattttttgttaacgtatcttagccgtatcgtatcctaaattttaaaaatttt 468  Q
    ||||| |||||| ||||||||||  |||||||||||||| | | |||||||||||||    
T  13422647 tataatttttttattaacgtatcccagccgtatcgtatcttgatttttaaaaatttt 13422703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 104; Significance: 1e-51; HSPs: 22)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 32 - 355
Target Start/End: Complemental strand, 688399 - 688074
Alignment:
Q  32 tacctatgaagtccgaatactgcaaaatggaaacgtacccgtatcgaataccgatacttcatggatacttgcggatacgtacccacgaagtatcataatt 131  Q
    ||||||| |||| || ||||| ||||||||| | |||||||||||| ||||||||||| || ||||||| ||||||||||| ||||||||||||| ||||    
T  688399 tacctataaagttcggatactccaaaatggagatgtacccgtatcggataccgatactccacggatactcgcggatacgtatccacgaagtatcagaatt 688300  T
Q  132 aattattttaaattttaat--cttttttatctgatacgtatagaatattccacagatacaacaaggatacttataagatatttcacaaatacgtatccta 229  Q
    | ||||||||| |||||||   | ||||||| ||||| |||   ||| || || ||||| |||||||||||| ||||||| |||||  |||||||||  |    
T  688299 atttattttaatttttaataaatattttatcagatacttatgttatactcaacggatac-acaaggatacttctaagatacttcacgtatacgtatcaaa 688201  T
Q  230 g-aaatgatgaagggtaagaaagtgagacaatgttgtaaaaatttagtagaaatgtatacgaatcaattttagatatgaatctgtaaaattgtttctcga 328  Q
    | ||| ||||||| |||| ||| |||||||||| |||||||||| | || | |||||||  | ||||||||||||||| |||  || |||||||||||||    
T  688200 gaaaaagatgaagagtaaaaaaatgagacaatgctgtaaaaattcattatagatgtatattattcaattttagatatgcatcaatataattgtttctcga 688101  T
Q  329 tgaactacttaaaattacacttattgt 355  Q
    ||||| ||||||||||| |||| ||||    
T  688100 tgaaccacttaaaattatacttcttgt 688074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 103 - 345
Target Start/End: Complemental strand, 2988376 - 2988133
Alignment:
Q  103 cggatacgtacccacgaagtatcataattaattattttaaattttaatc--ttttttatctgatacgtatagaatattccacagatacaacaaggatact 200  Q
    |||||||| || ||| |||||||| |||||||||||| || ||||||    | ||||| | ||||| ||||  ||| ||| |||||||| ||| ||||||    
T  2988376 cggatacgcacacacaaagtatcagaattaattatttaaatttttaaaaaatattttaacggatacttatacgatactccgcagataca-caatgatact 2988278  T
Q  201 tataagatatttcacaaatacgtatcctagaaat-gatgaagggtaagaaagtgagacaatgttgtaaaaatttagtagaaatgtatacgaatcaatttt 299  Q
    ||||||||| |||||||||||||||||||||||  ||||||| |||| ||||| ||| |||||| |||| ||| |||||| ||||||| || ||||||||    
T  2988277 tataagatagttcacaaatacgtatcctagaaaaagatgaagagtaa-aaagtcagataatgttataaacattcagtagagatgtatatgattcaatttt 2988179  T
Q  300 agatatgaatctgtaaaattgtttctcgatgaactacttaaaatta 345  Q
    ||||||| |||  ||||||||||||||||||||| |||||||||||    
T  2988178 agatatgcatcactaaaattgtttctcgatgaaccacttaaaatta 2988133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 71 - 355
Target Start/End: Complemental strand, 2032637 - 2032350
Alignment:
Q  71 cgtatcgaataccgatacttcatggatacttgcggatacgtacccacgaagtatcataattaattattttaaattttaatc--ttttttatctgatacgt 168  Q
    ||||||| ||||||||||| || ||||||| ||||||||||| ||||||||||||  ||||||||||||||| |||||||   | ||||||| ||||  |    
T  2032637 cgtatcggataccgatactccacggatactcgcggatacgtatccacgaagtatcggaattaattattttaatttttaataaatattttatcggatattt 2032538  T
Q  169 atagaatattccacagatacaacaaggatacttataagatatttcacaaatacgtatcctagaaat-gatgaagggtaagaaagtgagacaatgttgtaa 267  Q
    ||   ||| |||||| ||||| ||||||||||| ||||||| |||||| | | ||||||||||||  | ||||| |||| ||||||||||||| ||||||    
T  2032537 atgtgatactccacatataca-caaggatacttctaagatacttcacagacatgtatcctagaaaaaggtgaagagtaaaaaagtgagacaatattgtaa 2032439  T
Q  268 aaatttagtagaaatgtatacgaatcaattttagatatgaatctgtaaaattgtttctc-gatgaactacttaaaattacacttattgt 355  Q
    ||||| | ||   ||||||| || ||||||||||||||| |||  || ||||||||||| ||||||  ||||||||||| |||| ||||    
T  2032438 aaattcattattgatgtatatgactcaattttagatatgcatcaatagaattgtttctcggatgaaacacttaaaattatacttcttgt 2032350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 71 - 345
Target Start/End: Complemental strand, 12312303 - 12312028
Alignment:
Q  71 cgtatcgaataccgatacttcatggatacttgcggatacgtacccacgaagtatcataattaattattttaaattttaatcttt-tttatctgatacgta 169  Q
    ||||||| |||| ||||||  | ||||||||||||||||||||| | ||||||||  ||||||||||||||| ||| ||   |  ||||||  |||| ||    
T  12312303 cgtatcggatactgatactctacggatacttgcggatacgtacctatgaagtatcggaattaattattttaattttaaaaaataatttatccaatactta 12312204  T
Q  170 tagaatattccacagatacaacaaggatacttataagatatttcacaaatacgtatcctagaaatgatgaagggtaagaaagtga-gacaatgttgtaaa 268  Q
    ||  ||| |||| || |||| ||| ||||||||||||||| |||| | ||| ||||||||||||  ||||||||||||||||| | ||||||||||| ||    
T  12312203 taagatactccatagttaca-caatgatacttataagatacttcaaagatatgtatcctagaaaaaatgaagggtaagaaagtaaagacaatgttgtgaa 12312105  T
Q  269 aatttagtagaaatgtatacgaatcaattttagatatgaatctgtaaaattgtttctcgatgaactacttaaaatta 345  Q
    || | ||| ||||||||||| | ||||||||||||||| |||  || |||||||||||||| ||| |||| ||||||    
T  12312104 aaataagtggaaatgtatacaattcaattttagatatgcatcaatagaattgtttctcgatcaaccactttaaatta 12312028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 399 - 516
Target Start/End: Original strand, 8486307 - 8486423
Alignment:
Q  399 atataagttttagtataaattttttgttaacgtatcttagccgtatcgtatcctaaattttaaaaattttgcgtattcacgtatctgtatcgtatcgtac 498  Q
    |||||||||||||||||||    |||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||| | ||||||||||| ||    
T  8486307 atataagttttagtataaa-aaattgttatcgtatcttagccgtatcgtatcctaaattttaaaaattttgcgtatccacgtacccgtatcgtatcgcac 8486405  T
Q  499 ccgcacccgtatctgtat 516  Q
    ||||||| ||||| ||||    
T  8486406 ccgcacctgtatcagtat 8486423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 375 - 529
Target Start/End: Original strand, 7435026 - 7435183
Alignment:
Q  375 ttattttcttcaagtgctttacatatata--agttttagtataaa-ttttttgttaacgtatcttagccgtatcgtatcctaaattttaaaaattttgcg 471  Q
    |||||||||||||||  |||||||| |||  |||||||||||||| ||||||||||||||||||||  |||||||||||||||||||| |||| || | |    
T  7435026 ttattttcttcaagtattttacatacatagaagttttagtataaaattttttgttaacgtatcttactcgtatcgtatcctaaattttgaaaaattcgtg 7435125  T
Q  472 tattcacgtatctgtatcgtatcgtacccgcacccgtatctgtatctgggcttcatag 529  Q
    ||||   ||| |  ||||||||||||||||||||| |||||||||  |||||||||||    
T  7435126 tatttgtgtacccctatcgtatcgtacccgcacccatatctgtattcgggcttcatag 7435183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 375 - 464
Target Start/End: Complemental strand, 2988044 - 2987953
Alignment:
Q  375 ttattttcttcaagtgctttacata--tataagttttagtataaattttttgttaacgtatcttagccgtatcgtatcctaaattttaaaaa 464  Q
    |||||||||||||||  ||||||||  |||||| ||||||||||  ||||||||||||||||||||||||||||||||||||||||| ||||    
T  2988044 ttattttcttcaagtattttacatacatataaggtttagtataatgtttttgttaacgtatcttagccgtatcgtatcctaaattttgaaaa 2987953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 83 - 350
Target Start/End: Original strand, 8485797 - 8486064
Alignment:
Q  83 cgatacttcatggatacttgcggatacgtacccacgaagtatcataattaattattttaaattttaatc--ttttttatctgatacgtatagaatattcc 180  Q
    |||||||||| |||||||    |||||||||||||||||||||  |||||| |||||||| ||| ||    | ||||||   |||| ||||  ||| |||    
T  8485797 cgatacttcacggatactcttagatacgtacccacgaagtatctgaattaaatattttaattttaaaaaaatattttattgaatacttataagatactcc 8485896  T
Q  181 acagatacaacaaggatacttataagatatttcacaaatacgtatcctagaaatgatgaagggtaagaaagtgagacaatgttgtaaaaatttagtagaa 280  Q
    | ||||||| | | ||||||||||||| | |||||| ||||||||||||||||  || |||||||| ||| ||||| | |||||| ||| || |||  |     
T  8485897 atagataca-ctatgatacttataagacacttcacatatacgtatcctagaaaaaataaagggtaaaaaattgagatagtgttgtgaaa-ttcagtgtag 8485994  T
Q  281 atgtatacgaatcaattttagatatgaatctgtaaaattgtttctcgatgaactacttaaaattacactt 350  Q
    ||||||| || ||||||||||||||| ||| ||| |||||||||| |||||||  |||||||||| ||||    
T  8485995 atgtatatgattcaattttagatatgcatcagtagaattgtttcttgatgaaccgcttaaaattatactt 8486064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 35 - 355
Target Start/End: Original strand, 10229251 - 10229573
Alignment:
Q  35 ctatgaagtccgaatactgcaaaatggaaacgtacccgtatcgaataccgatacttcatggatacttgcggatacgtacccacgaagtatcataattaat 134  Q
    |||||||||| | ||||| ||||| ||| |||||||||||||  ||||||||||| || | ||| | ||||||||| ||||||||||||||| |||||||    
T  10229251 ctatgaagtctggatacttcaaaacggagacgtacccgtatcagataccgatactccacgtatattcgcggatacgcacccacgaagtatcagaattaat 10229350  T
Q  135 tattttaaattt----taatcttttttatctgatacgtatagaatattccacagatacaacaaggatacttataagatatttcacaaatacgtatcc-ta 229  Q
    || |||||||||     ||  | |||||   ||||| ||||  ||  ||  | ||||| ||||| | |||||| |||||||||||| |||||||||| |     
T  10229351 ta-tttaaatttaaaaaaaaatattttaatggatacttatacgattctctgcggatac-acaagaacacttat-agatatttcacatatacgtatccttc 10229447  T
Q  230 gaaatgatgaagggtaagaaagtgagacaatgttgtaaaaatttagtagaaatgtatacgaatcaattttagatatgaatctgtaaaattgtttctcgat 329  Q
     ||| ||||||| |||| ||||||||||||||||| ||| |||   |||| ||||||| || |||||| |||||||| ||   || |||||||| | |||    
T  10229448 aaaaagatgaagagtaaaaaagtgagacaatgttgcaaacattcgatagagatgtatatgattcaattatagatatgcataactagaattgttttttgat 10229547  T
Q  330 gaactacttaaaattacacttattgt 355  Q
    |||| ||||||||||| |||| ||||    
T  10229548 gaaccacttaaaattatacttcttgt 10229573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 116 - 350
Target Start/End: Complemental strand, 32340509 - 32340276
Alignment:
Q  116 acgaagtatcataattaattattttaaattttaatc--ttttttatctgatacgtatagaatattccacagatacaacaaggatacttataagatatttc 213  Q
    ||||||||| |||||||||||||| | |||||||    | ||||||| ||||| |||   ||||| |||||||||| |||| ||| || ||||||| |||    
T  32340509 acgaagtattataattaattattt-acattttaaaaaatattttatcggatacttatgtgatatttcacagataca-caag-ataattctaagatacttc 32340413  T
Q  214 acaaatacgtatcctagaaat-gatgaagggtaagaaagtgagacaatgttgtaaaaatttagtagaaatgtatacgaatcaattttagatatgaatctg 312  Q
    ||| ||| ||||||||||||  |||||||||||| |||||||||||||||||| |||||| |||| | |||||||  | ||||||| | ||||| |||      
T  32340412 acatatatgtatcctagaaaaagatgaagggtaaaaaagtgagacaatgttgt-aaaattcagtaaagatgtatataattcaatttcatatatgcatcaa 32340314  T
Q  313 taaaattgtttctcgatgaactacttaaaattacactt 350  Q
    || |||||||| ||||||||| | ||||||||| ||||    
T  32340313 tagaattgtttttcgatgaaccatttaaaattatactt 32340276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 377 - 530
Target Start/End: Complemental strand, 2032130 - 2031977
Alignment:
Q  377 attttcttcaagtgctttacata--tataagttttagtataaattttttgttaacgtatcttagccgtatcgtatcctaaattttaaaaattttgcgtat 474  Q
    |||||||||||||  ||||||||  ||||||||||| ||||||||||| ||||| ||||| ||   |||||||||||||||||| ||||| || ||||||    
T  2032130 attttcttcaagtattttacatacatataagttttattataaattttt-gttaatgtatcctaattgtatcgtatcctaaatttaaaaaaatt-gcgtat 2032033  T
Q  475 tcacgtatctgtatcgtatcgtacccgcacccgtatctgtatctgggcttcatagg 530  Q
     | | ||   || |||||||||||||||||||||||| ||||  ||||||||||||    
T  2032032 ccgcatactcgtttcgtatcgtacccgcacccgtatccgtattggggcttcatagg 2031977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 375 - 464
Target Start/End: Original strand, 10229652 - 10229743
Alignment:
Q  375 ttattttcttcaagtgctttacata--tataagttttagtataaattttttgttaacgtatcttagccgtatcgtatcctaaattttaaaaa 464  Q
    ||||||| |||||||  ||||||||  |||| ||||||||||||||||||| ||||||||||||||  ||||||||||||||||||| ||||    
T  10229652 ttattttgttcaagtattttacatacatatatgttttagtataaattttttattaacgtatcttagttgtatcgtatcctaaattttgaaaa 10229743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 71 - 142
Target Start/End: Complemental strand, 12283974 - 12283903
Alignment:
Q  71 cgtatcgaataccgatacttcatggatacttgcggatacgtacccacgaagtatcataattaattattttaa 142  Q
    ||||||| ||||||||||| || ||||| ||||||||| ||||||||||||||||| |||||||||||||||    
T  12283974 cgtatcggataccgatactccacggatatttgcggatatgtacccacgaagtatcaaaattaattattttaa 12283903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 355 - 463
Target Start/End: Original strand, 30928570 - 30928680
Alignment:
Q  355 taatgaagggtaattagtgcttattttcttcaagtgctttacatat--ataagttttagtataaattttttgttaacgtatcttagccgtatcgtatcct 452  Q
    |||||||||||||| | || |||||||||||||||  |||||||||  ||||||||||||||||| |||||| |||| ||| ||||| |||| ||||| |    
T  30928570 taatgaagggtaatcaatgtttattttcttcaagtattttacatatatataagttttagtataaaatttttgataacctattttagctgtatagtatcat 30928669  T
Q  453 aaattttaaaa 463  Q
    |||||| ||||    
T  30928670 aaatttaaaaa 30928680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 248 - 350
Target Start/End: Original strand, 30928334 - 30928436
Alignment:
Q  248 aaagtgagacaatgttgtaaaaatttagtagaaatgtatacgaatcaattttagatatgaatctgtaaaattgtttctcgatgaactacttaaaattaca 347  Q
    |||| |||||||||||||| ||||| |||||| ||||||| || ||||||||| ||||| | | ||| |||||||||| ||||||| ||||||||||| |    
T  30928334 aaagcgagacaatgttgtagaaattaagtagagatgtatatgattcaattttatatatgcaccagtataattgtttcttgatgaaccacttaaaattata 30928433  T
Q  348 ctt 350  Q
    |||    
T  30928434 ctt 30928436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 400 - 529
Target Start/End: Complemental strand, 22297113 - 22296979
Alignment:
Q  400 tataagttttagtataaattttttgttaacgtatcttagccgtatcgtatcctaaattt------taaaaattttgcgtattcacgtatctgtatcgtat 493  Q
    |||||||||||||||||||||||||||||||||||||| | |||   ||||||||||||       |||||| |||||||| |||||| || ||||||||    
T  22297113 tataagttttagtataaattttttgttaacgtatctta-cggtagaatatcctaaatttaaaaaaaaaaaatattgcgtatccacgtacctatatcgtat 22297015  T
Q  494 cgtacccgcacccgtatctgtatctgggcttcatag 529  Q
     ||| ||||| ||||| ||||||| | |||||||||    
T  22297014 ggtatccgcatccgtacctgtatccgagcttcatag 22296979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 399 - 481
Target Start/End: Original strand, 1929255 - 1929336
Alignment:
Q  399 atataagttttagtataaattttttgttaacgtatcttagccgtatcgtatcctaaattttaaaaattttgcgtattcacgta 481  Q
    |||||| |||||||||||||  ||||||||||||||||| |  ||||||||||| |||||||||||||| |||||||| ||||    
T  1929255 atataaattttagtataaataatttgttaacgtatcttaactatatcgtatcct-aattttaaaaatttcgcgtattcgcgta 1929336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 211 - 304
Target Start/End: Original strand, 22053869 - 22053962
Alignment:
Q  211 ttcacaaatacgtatcctagaaatgatgaagggtaagaaagtgagacaatgttgtaaaaatttagtagaaatgtatacgaatcaattttagata 304  Q
    |||| ||||| || || |||||| |||||||||||| ||||||||| | ||||||||||||| |||||| |||| ||||  |||||||||||||    
T  22053869 ttcataaatatgtgtcttagaaaagatgaagggtaaaaaagtgagatagtgttgtaaaaattcagtagagatgtgtacggttcaattttagata 22053962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 399 - 492
Target Start/End: Complemental strand, 17533203 - 17533111
Alignment:
Q  399 atataagttttagtataaattttttgttaacgtatcttagccgtatcgtatcctaaattttaaaaattttgcgtattcacgtatctgtatcgta 492  Q
    |||||| ||||||||||||| |||||| ||||| ||||| |||||||||||||| |||||||||| ||| || ||| | |||| | ||||||||    
T  17533203 atataaattttagtataaatattttgtcaacgtttcttaaccgtatcgtatcct-aattttaaaattttcgcatatccgcgtacccgtatcgta 17533111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 72 - 142
Target Start/End: Complemental strand, 7495328 - 7495258
Alignment:
Q  72 gtatcgaataccgatacttcatggatacttgcggatacgtacccacgaagtatcataattaattattttaa 142  Q
    |||| |||||| |||||||||||||||||||||||||| || | | | ||||||  |||||||||||||||    
T  7495328 gtattgaatactgatacttcatggatacttgcggatacatatctatggagtatcgaaattaattattttaa 7495258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 190 - 306
Target Start/End: Complemental strand, 22297486 - 22297370
Alignment:
Q  190 acaaggatacttataagatatttcacaaatacgtatcctagaaat-gatgaagggtaagaaagtgagacaatgttgtaaaaatttagtagaaatgtatac 288  Q
    |||||||||||| |||  || |||||| | ||||||| || |||  ||||||||| || |||||||||||| |||||||||||| | |||| |||||||     
T  22297486 acaaggatacttgtaacgtacttcacagaaacgtatcataaaaaaagatgaagggaaa-aaagtgagacaacgttgtaaaaattcaatagagatgtatat 22297388  T
Q  289 gaatcaattttagatatg 306  Q
    || | |||||||||||||    
T  22297387 gacttaattttagatatg 22297370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 401 - 464
Target Start/End: Complemental strand, 12283529 - 12283466
Alignment:
Q  401 ataagttttagtataaattttttgttaacgtatcttagccgtatcgtatcctaaattttaaaaa 464  Q
    |||||||||||||||||   ||||||| | ||| ||||||||||| ||||||||||||| ||||    
T  12283529 ataagttttagtataaaaactttgttagcatattttagccgtatcatatcctaaatttttaaaa 12283466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 100; Significance: 4e-49; HSPs: 66)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 100; E-Value: 4e-49
Query Start/End: Original strand, 93 - 355
Target Start/End: Original strand, 4775659 - 4775918
Alignment:
Q  93 tggatacttgcggatacgtacccacgaagtatcataattaattattttaaattttaatctt-ttttatctgatacgtatagaatattccacagatacaac 191  Q
    |||||||||||||||||||||| || |||||||||||||||||||||||| ||||||   | ||||||| ||||| ||||||||| || ||| ||||  |    
T  4775659 tggatacttgcggatacgtacc-acaaagtatcataattaattattttaatttttaaaaatattttatc-gatacttatagaatactcaacaaatacc-c 4775755  T
Q  192 aaggatacttataagatatttcacaaatacgtatcctagaaatgatgaagggtaagaaagtgagacaatgttgtaaaaatttagtagaaatgtatacgaa 291  Q
    ||| |||||||||||||  ||||||||||  ||||||||||| |||||||||||| |||||||||||||||||| | |||||||| |||||||||| | |    
T  4775756 aagaatacttataagatgcttcacaaatatatatcctagaaaagatgaagggtaaaaaagtgagacaatgttgtgataatttagtggaaatgtatatg-a 4775854  T
Q  292 tcaattttagatatgaatctgtaaaattgtttctcgatgaactacttaaaattacacttattgt 355  Q
    ||||||||||||||| |||     |||||||||||||| | | ||||||||||| |||||||||    
T  4775855 tcaattttagatatgcatcaaagtaattgtttctcgataatccacttaaaattatacttattgt 4775918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 86; E-Value: 8e-41
Query Start/End: Original strand, 55 - 352
Target Start/End: Original strand, 45773839 - 45774134
Alignment:
Q  55 aaaatggaaacgtacccgtatcgaataccgatacttcatggatacttgcggatacgtacccacgaagtatcataattaattattttaaattttaatc--t 152  Q
    |||||||| |||| || |||||| ||| |||||||||| ||||||||||||||||||| | | ||||||||  ||||||||||||||| |||||||   |    
T  45773839 aaaatggagacgtgcctgtatcggatatcgatacttcacggatacttgcggatacgtatctatgaagtatcgaaattaattattttaatttttaataaat 45773938  T
Q  153 tttttatctgatacgtatagaatattccacagatacaacaaggatacttataagatatttcacaaatacgtatcctagaaat-gatgaagggtaagaaag 251  Q
     ||||||| ||||| |||   ||| |||| ||||||  |     || || ||||||| |||||| ||||||||||||||||  |||||||  ||| ||||    
T  45773939 attttatcggatacttatgtgatactccaaagatacctc-----taattttaagatacttcacagatacgtatcctagaaaaagatgaagaataaaaaag 45774033  T
Q  252 tgagacaatgttgtaaaaatttagtagaaatgtatacgaatcaattttagatatgaatctgtaaaattgtttctcgatgaactacttaaaattacactta 351  Q
    ||||||||||||||||||||| | || | ||||||| || ||||||||||||||  |||  || |||||||||||||||||| ||||||||||| |||||    
T  45774034 tgagacaatgttgtaaaaattcattatagatgtatatgattcaattttagatatacatcaatagaattgtttctcgatgaaccacttaaaattatactta 45774133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 79 - 355
Target Start/End: Original strand, 2295225 - 2295502
Alignment:
Q  79 ataccgatacttcatggatacttgcggatacgtacccacgaagtatcataattaattattttaaattttaat--cttttttatctgatacgtatagaata 176  Q
    ||||||||||| || ||||||| ||||||||||| ||||||||||||  ||||||||||||||| |||||||   | ||||||| ||||  ||| | |||    
T  2295225 ataccgatactccaaggatactcgcggatacgtatccacgaagtatcggaattaattattttaatttttaataaatattttatcagatatttatgggata 2295324  T
Q  177 ttccacagatacaacaaggatacttataagatatttcacaaatacgtatcct-agaaatgatgaagggtaagaaagtgagacaatgttgtaaaaatttag 275  Q
    |||||||||||| |||| ||||||| ||||||| |||||| | ||||||||| | ||| |||||||  ||| ||| ||||||||||||||||||||| |     
T  2295325 ttccacagatac-acaatgatacttctaagatacttcacagacacgtatcctaaaaaaagatgaagaataa-aaattgagacaatgttgtaaaaattcat 2295422  T
Q  276 tagaaatgtatacgaatcaattttagatatgaatctgtaaaattgtttctcgatgaactacttaaaattacacttattgt 355  Q
    || | ||||||| || ||||||| ||||||  |||  || |||||||||||||||||  ||||||||||| |||| ||||    
T  2295423 tatagatgtataggactcaatttaagatattcatcaatagaattgtttctcgatgaaacacttaaaattatacttcttgt 2295502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 81; E-Value: 8e-38
Query Start/End: Original strand, 196 - 355
Target Start/End: Original strand, 44987234 - 44987394
Alignment:
Q  196 atacttataagatatttcacaaatacgtatcctagaaatgatgaagggtaagaaa-gtgagacaatgttgtaaaaatttagtagaaatgtatacgaatca 294  Q
    ||||||||||||| |||||||||||||||||||||||| |||||| ||||| ||| |||||| ||||||||||||||| | | || ||||| | || |||    
T  44987234 atacttataagatgtttcacaaatacgtatcctagaaaagatgaaaggtaaaaaaagtgagataatgttgtaaaaattcactcgagatgtacatgattca 44987333  T
Q  295 attttagatatgaatctgtaaaattgtttctcgatgaactacttaaaattacacttattgt 355  Q
    |||||||||||| ||| ||| ||||||||||| |||||||||||||||||| |||| ||||    
T  44987334 attttagatatgcatcggtagaattgtttctcaatgaactacttaaaattatacttcttgt 44987394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 81; E-Value: 8e-38
Query Start/End: Original strand, 38 - 344
Target Start/End: Complemental strand, 47923260 - 47922951
Alignment:
Q  38 tgaagtccgaatactgcaaaatggaaacgtacccgtatcgaataccgatacttcatggatacttgcggatacgtacccacgaagtatcataattaattat 137  Q
    ||||| |||||||||  |||| ||| |||||||||||||| ||||| |||||||| ||||||| || |||||||||||||| ||||||||||||||||||    
T  47923260 tgaagcccgaatactctaaaacggagacgtacccgtatcggataccaatacttcacggatactcgcagatacgtacccacggagtatcataattaattat 47923161  T
Q  138 tttaaattt--taatcttttttatctgatacgtatagaatattccacagatacaacaaggatacttataagatatttcacaaatacgtatcct--agaaa 233  Q
    ||||| |||   ||  | ||||||| ||||| ||||  ||||| ||||||||| |||| ||||||| ||||||| ||||||  ||| |||| |  | |||    
T  47923160 tttaattttaaaaaaatattttatcggatacttatatgatatttcacagatac-acaatgatacttctaagatacttcacatttacatatcttaaaaaaa 47923062  T
Q  234 tgatgaagggtaagaaagtgagacaatgttgtaaaaatttagtagaaatgtatacgaatcaattttagatatgaatctgtaaaattgtttctcgatgaac 333  Q
      |||||| |||| ||||||| | ||||||||||||| |  ||||| ||  ||| || ||||||||||||| | |||  ||||||||||||| |||||||    
T  47923061 aaatgaagagtaacaaagtgacataatgttgtaaaaactctgtagagatccatatgattcaattttagatacgcatcaataaaattgtttcttgatgaac 47922962  T
Q  334 tacttaaaatt 344  Q
     | ||||||||    
T  47922961 cagttaaaatt 47922951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 81; E-Value: 8e-38
Query Start/End: Original strand, 195 - 350
Target Start/End: Original strand, 53586368 - 53586524
Alignment:
Q  195 gatacttataagatatttcacaaatacgtatcctagaaat-gatgaagggtaagaaagtgagacaatgttgtaaaaatttagtagaaatgtatacgaatc 293  Q
    ||||||||||||||| |||||| ||||||||||||||||  |||||||||||| | ||||||||||||||||||| ||| | |||| ||||||| || ||    
T  53586368 gatacttataagatacttcacagatacgtatcctagaaaaagatgaagggtaaaatagtgagacaatgttgtaaacattcaatagagatgtatatgattc 53586467  T
Q  294 aattttagatatgaatctgtaaaattgtttctcgatgaactacttaaaattacactt 350  Q
    ||||| ||||||| |||  || |||||||||||||||||||||||||||||| ||||    
T  53586468 aatttcagatatgcatcactataattgtttctcgatgaactacttaaaattatactt 53586524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 79 - 343
Target Start/End: Complemental strand, 10038137 - 10037870
Alignment:
Q  79 ataccgatacttcatggatacttgcggatacgtacccacgaagtatcataattaattattttaaattttaatc--ttttttatctgatacgtataga--a 174  Q
    |||||||| || ||||||||||  ||||| |||| ||||||| ||| | ||||||||||||||  | ||||    | ||||||| ||||| |||| |  |    
T  10038137 ataccgatgctccatggatactcacggatgcgtatccacgaaatattaaaattaattattttagttattaaaaaatattttatcggatacttatatagga 10038038  T
Q  175 tattccacagatacaacaaggatacttataagatatttcacaaatacgtatcctagaaatgatgaagggtaagaaagtgagacaatgttgtaaaaattta 274  Q
    || |||||| ||| | || ||||| ||||||||||||||||| ||| |||||||||||| |||||||||||| |||||||||||||||||  |||||| |    
T  10038037 tactccacatataga-catggataattataagatatttcacatatatgtatcctagaaaagatgaagggtaaaaaagtgagacaatgttgcgaaaattca 10037939  T
Q  275 gtagaaatgtatacgaatcaattttagatatgaatctgtaaaattgtttctcgatgaactacttaaaat 343  Q
     | || ||||||| || ||||||||||||||| ||| ||| | |||||||||||||||| |||||||||    
T  10037938 atggagatgtatatgattcaattttagatatgcatcagtagatttgtttctcgatgaaccacttaaaat 10037870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 377 - 529
Target Start/End: Complemental strand, 19721486 - 19721333
Alignment:
Q  377 attttcttcaagtgctttacata--tataagttttagtataaattttttgttaacgtatcttagccgtatcgtatcctaaattttaaaaattttgcgtat 474  Q
    |||||||||||||  ||||||||  ||||||||||| ||||||||||| ||||||||||| || || ||||||||||||||||||||||| |  ||||||    
T  19721486 attttcttcaagtattttacatacatataagttttattataaattttt-gttaacgtatcctaaccatatcgtatcctaaattttaaaaaatccgcgtat 19721388  T
Q  475 tcacgtatctgtatcgtatcgtacccgcacccgtatctgtatctgggcttcatag 529  Q
     | |||| |  |||||||||||||||||||||||||||||||| | |||||||||    
T  19721387 ccgcgtacccatatcgtatcgtacccgcacccgtatctgtatcggagcttcatag 19721333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 377 - 497
Target Start/End: Original strand, 53586595 - 53586716
Alignment:
Q  377 attttcttcaagtgctttacata--tataagttttagtataaattttttgttaacgtatcttagccgtatcgtatcctaaattttaaaaattttgcgtat 474  Q
    |||||||||||||  ||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||| || ||||||    
T  53586595 attttcttcaagtattttacataaatataagttttagtataaattttttgttaacgtatcttagccgtatcgtat-ctaaattttgaaaaattcgcgtat 53586693  T
Q  475 tcacgtatctgtatcgtatcgta 497  Q
     |||||| | |||||||||||||    
T  53586694 ccacgtacccgtatcgtatcgta 53586716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 365 - 500
Target Start/End: Original strand, 6008400 - 6008537
Alignment:
Q  365 taattagtgcttattttcttcaagtgctttacata--tataagttttagtataaattttttgttaacgtatcttagccgtatcgtatcctaaattttaaa 462  Q
    |||||| || |||||||||||||||  ||||||||  ||||||||||| ||||||||||||||| | |||||||||||||||||||||||||||||| ||    
T  6008400 taattaatgtttattttcttcaagtattttacatacatataagttttaatataaattttttgtttaagtatcttagccgtatcgtatcctaaattttgaa 6008499  T
Q  463 aattttgcgtattcacgtatctgtatcgtatcgtaccc 500  Q
    |  ||  ||||| | | |||||||||||||||||||||    
T  6008500 atattcacgtatccgcatatctgtatcgtatcgtaccc 6008537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 103 - 355
Target Start/End: Complemental strand, 35103762 - 35103508
Alignment:
Q  103 cggatacgtacccacgaagtatcataattaattattttaaattttaatc--ttttttatctgatacgtatagaatattccacagatacaacaaggatact 200  Q
    ||||||||||| |||||||||||| ||||||||||||||| ||||||    | ||||||| |||||  ||   ||| || ||| ||| ||||| ||||||    
T  35103762 cggatacgtactcacgaagtatcaaaattaattattttaatttttaacaaatattttatcagatactaatgtgatactctacatata-aacaaagatact 35103664  T
Q  201 tataagatatttcacaaatacgtatcctagaaatg-atgaagggtaagaaagtgagacaatgttgtaaaaatttagtagaaatgtatacgaatcaatttt 299  Q
    | ||||||| |||| | ||| ||||||||||||   |||||| |||| ||||||||||||||||||||||||| | || ||||||||| || ||||||||    
T  35103663 tctaagatacttcatagatatgtatcctagaaaaacatgaagagtaaaaaagtgagacaatgttgtaaaaattcattataaatgtatatgattcaatttt 35103564  T
Q  300 agatatgaatctgtaaaattgtttctcgatgaactacttaaaattacacttattgt 355  Q
    ||||||| |||  || ||||| |||  ||||||  ||||||||||| |||| ||||    
T  35103563 agatatgcatcattataattgattccggatgaaacacttaaaattatacttcttgt 35103508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 195 - 329
Target Start/End: Complemental strand, 35823742 - 35823608
Alignment:
Q  195 gatacttataagatatttcacaaatacgtatcctagaaatgatgaagggtaagaaagtgagacaatgttgtaaaaatttagtagaaatgtatacgaatca 294  Q
    ||||||||||||||| |||| | || | |||| |||||| ||||||||||||||||||||||||||||||| ||||  || | ||||||||||  | |||    
T  35823742 gatacttataagatacttcaaagatgcctatcgtagaaaagatgaagggtaagaaagtgagacaatgttgtgaaaaaatattggaaatgtatataattca 35823643  T
Q  295 attttagatatgaatctgtaaaattgtttctcgat 329  Q
    |||||||||||||||  ||| ||||||||||||||    
T  35823642 attttagatatgaattagtagaattgtttctcgat 35823608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 157 - 266
Target Start/End: Original strand, 24913782 - 24913890
Alignment:
Q  157 tatctgatacgtatagaatattccacagatacaacaaggatacttataagatatttcacaaatacgtatcctagaaatgatgaagggtaagaaagtgaga 256  Q
    |||||||||| ||| | ||| ||| |||||||| |||||||||||||||||||||||||| |||||||||||||||| ||||||||| || |||||||||    
T  24913782 tatctgatacttattgtatactccgcagataca-caaggatacttataagatatttcacagatacgtatcctagaaaagatgaaggggaaaaaagtgaga 24913880  T
Q  257 caatgttgta 266  Q
    | ||||||||    
T  24913881 cgatgttgta 24913890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 399 - 500
Target Start/End: Complemental strand, 34072778 - 34072678
Alignment:
Q  399 atataagttttagtataaattttttgttaacgtatcttagccgtatcgtatcctaaattttaaaaattttgcgtattcacgtatctgtatcgtatcgtac 498  Q
    |||||| ||||||||||||| ||||||||||||||||||||||||||||||||| | |||||||||||| ||||||  ||||||| ||||||||| ||||    
T  34072778 atataaattttagtataaatattttgttaacgtatcttagccgtatcgtatcct-agttttaaaaatttcgcgtatctacgtatccgtatcgtattgtac 34072680  T
Q  499 cc 500  Q
    ||    
T  34072679 cc 34072678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 358 - 464
Target Start/End: Original strand, 40217887 - 40217995
Alignment:
Q  358 tgaagggtaattagtgcttattttcttcaagtgctttacata--tataagttttagtataaattttttgttaacgtatcttagccgtatcgtatcctaaa 455  Q
    ||||| ||||| | || |||||||||||||||  |||| |||  ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  40217887 tgaagagtaatcaatgtttattttcttcaagtattttatatacatataagttttagtataaatattttgttaacgtatcttagccgtatcgtatcctaaa 40217986  T
Q  456 ttttaaaaa 464  Q
    ||| |||||    
T  40217987 tttcaaaaa 40217995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 358 - 476
Target Start/End: Complemental strand, 22198669 - 22198549
Alignment:
Q  358 tgaagggtaattagtgcttattttcttcaagtgctttacat--atataagttttagtataaattttttgttaacgtatcttagccgtatcgtatcctaaa 455  Q
    ||||| ||||| | |||||||||| |||||||  |||||||  |||||||||||||||||||| ||||||||||| |||||||||||||| | |||| ||    
T  22198669 tgaagagtaataaatgcttatttttttcaagtattttacatgtatataagttttagtataaatattttgttaacgcatcttagccgtatcttgtcctgaa 22198570  T
Q  456 ttttaaaaattttgcgtattc 476  Q
    ||||||||| || ||||||||    
T  22198569 ttttaaaaacttcgcgtattc 22198549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 106 - 355
Target Start/End: Complemental strand, 53018810 - 53018559
Alignment:
Q  106 atacgtacccacgaagtatcataattaattattttaaattttaatc--ttttttatctgatacgtatagaatattccacagatacaacaaggatacttat 203  Q
    ||||||| ||||||||||| | ||||| ||||||||| |||||||   | || |||| ||||| |||   ||| |||||| ||||| ||||||||| | |    
T  53018810 atacgtatccacgaagtattaaaattagttattttaatttttaataaatattatatcggatacttatttgatactccacatataca-caaggatacatct 53018712  T
Q  204 aagatatttcacaaatacgtatcctagaaat-gatgaagggtaagaaagtgagacaatgttgtaaaaatttagtagaaatgtatacgaatcaattttaga 302  Q
    |||||| |||||| ||||||||||||||||  ||||||| |||| ||| ||||||||| || |||||||| | |  |  |||||| || |||||||||||    
T  53018711 aagatacttcacatatacgtatcctagaaaaagatgaagagtaaaaaaatgagacaatcttttaaaaattcattctagctgtatatgattcaattttaga 53018612  T
Q  303 tatgaatctgtaaaattgtttctcgatgaactacttaaaattacacttattgt 355  Q
    |||| |||  || ||||||||||| |||||  | ||||||||| |||||||||    
T  53018611 tatgcatcaatagaattgtttctcaatgaatcagttaaaattatacttattgt 53018559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 190 - 266
Target Start/End: Original strand, 24917499 - 24917575
Alignment:
Q  190 acaaggatacttataagatatttcacaaatacgtatcctagaaatgatgaagggtaagaaagtgagacaatgttgta 266  Q
    ||||||||||||||||||||||||||| |||||||||||||||| ||||||||| || |||||||||| ||||||||    
T  24917499 acaaggatacttataagatatttcacagatacgtatcctagaaaagatgaaggggaaaaaagtgagacgatgttgta 24917575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 95 - 306
Target Start/End: Complemental strand, 15477002 - 15476789
Alignment:
Q  95 gatacttgcggatacgtacccacgaagtatcataattaattattttaaattttaatc--ttttttatctgatacgtatagaatattccacagatacaaca 192  Q
    |||||| ||||||||||||  ||||||||||  |||||| |||||||| |||||||   | ||||||| ||||| | |   ||| |||||||||||| ||    
T  15477002 gatactcgcggatacgtactgacgaagtatcggaattaactattttaatttttaataaatgttttatcagatacttgtgtgatactccacagataca-ca 15476904  T
Q  193 aggatacttataagatatttcacaaatacgtatcctagaaat-gatgaagggtaagaaagtgagacaatgttgtaaaaatttagtagaaatgtatacgaa 291  Q
    ||||||||| ||||||| |||| | ||||||||| ||||||  ||||||| |||| || ||||||||||||||||| |||| | || | |||| || ||     
T  15476903 aggatacttctaagatacttcaaagatacgtatcttagaaaaagatgaagagtaaaaaggtgagacaatgttgtaagaattcattatagatgtgtaagat 15476804  T
Q  292 tcaattttagatatg 306  Q
    |||||||||||||||    
T  15476803 tcaattttagatatg 15476789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 105 - 342
Target Start/End: Original strand, 40217435 - 40217673
Alignment:
Q  105 gatacgtacccacgaagtatcataattaattattttaaattttaatct----tttttatctgatacgtatagaatattccacagatacaacaaggatact 200  Q
    |||||||||||| ||||||||| |||||||||||| || ||||||       |||||||| ||||| ||||  ||| |||| | ||||||    ||||||    
T  40217435 gatacgtacccatgaagtatcagaattaattatttaaatttttaaaaaaatatttttatcggatacttatatgatactccataaatacaaa---gatact 40217531  T
Q  201 tataagatatttcacaaatacgtatcctagaaat-gatgaagggtaagaaagtgagacaatgttgtaaaaatttagtagaaatgtatacgaatcaatttt 299  Q
    |||| |||| |||||| |||| |||||||||||  |||||||||||| |||||||||||||||| |||||||| |||| | ||||||| || ||||||||    
T  40217532 tatatgatacttcacatatacatatcctagaaaaagatgaagggtaaaaaagtgagacaatgttataaaaattcagtaaagatgtatatgattcaatttt 40217631  T
Q  300 agatatgaatctgtaaaattgtttctcgatgaactacttaaaa 342  Q
    |  ||||  || ||| |||||||||| ||| ||| ||||||||    
T  40217632 atgtatgcgtcggtagaattgtttcttgataaac-acttaaaa 40217673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 399 - 497
Target Start/End: Complemental strand, 38947638 - 38947541
Alignment:
Q  399 atataagttttagtataaattttttgttaacgtatcttagccgtatcgtatcctaaattttaaaaattttgcgtattcacgtatctgtatcgtatcgta 497  Q
    |||||| ||||||||||||| |||||||||| ||||||| |||||||||||||| ||||||||||||||||| ||| | |||| | |||||||||||||    
T  38947638 atataaattttagtataaatattttgttaacatatcttaaccgtatcgtatcct-aattttaaaaattttgcatatccgcgtacccgtatcgtatcgta 38947541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 128 - 355
Target Start/End: Complemental strand, 19721930 - 19721701
Alignment:
Q  128 aattaattattttaaattttaatc--ttttttatctgatacgtatagaatattccacagatacaacaaggatacttataagatatttcacaaatacgtat 225  Q
    ||||||||||||||| |||||||   | ||||||| ||||| |||   ||| |||||||||||| ||| |||| || ||||||| |||||| | ||||||    
T  19721930 aattaattattttaatttttaataaatattttatcggatacttatgtgatactccacagataca-caatgatatttctaagatacttcacatacacgtat 19721832  T
Q  226 cctagaaat-gatgaagggtaagaaagtgagacaatgttgtaaaaatttagtagaaatgtatacgaatcaattttagatatgaatctgtaaaattgtttc 324  Q
    ||||||||  ||||||| |||| |||||||||| |||||||||||||| | || | || |||| || | |||||| |||||| |||  || |||||||||    
T  19721831 cctagaaaaagatgaagagtaaaaaagtgagacgatgttgtaaaaattcattatagatatatatgacttaattttggatatgcatcaatagaattgtttc 19721732  T
Q  325 tcgatgaactacttaaaattacacttattgt 355  Q
    || || ||  ||||||||||| |||| ||||    
T  19721731 tcaattaaacacttaaaattatacttcttgt 19721701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 355 - 511
Target Start/End: Original strand, 2295694 - 2295850
Alignment:
Q  355 taatgaagggtaattagtgcttattttcttcaagtgctttacata--tataagttttagtataaattttttgttaacgtatcttagccgtatcgtatcct 452  Q
    |||||||| ||||||| || | |||||||||||||  |||| |||  ||||||||| | ||||| ||||||||||||||||| || ||||||||||||||    
T  2295694 taatgaagagtaattaatgttgattttcttcaagtattttatatacatataagttt-attataa-ttttttgttaacgtatcctaaccgtatcgtatcct 2295791  T
Q  453 aaattttaaaaattttgcgtattcacgtatctgtatcgtatcgtacccgcacccgtatc 511  Q
    |||||| |||||  | | |||| | |||| | |||||||||| |||| |||||||||||    
T  2295792 aaatttaaaaaaaatcgtgtatccgcgtacccgtatcgtatcttacctgcacccgtatc 2295850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 190 - 326
Target Start/End: Original strand, 27675401 - 27675539
Alignment:
Q  190 acaaggatacttataagatatttcacaaatacgtatcctagaaatga--tgaagggtaagaaagtgagacaatgttgtaaaaatttagtagaaatgtata 287  Q
    ||||||| | |||||||| | |||||| ||||||||||||||||  |  |||||||||| | |||||||||||||||| || ||| || ||| |||||||    
T  27675401 acaaggacatttataagacacttcacatatacgtatcctagaaaaaaaatgaagggtaaaatagtgagacaatgttgtgaagattcagcagagatgtata 27675500  T
Q  288 cgaatcaattttagatatgaatctgtaaaattgtttctc 326  Q
     || ||||||||||||||| |||  || |||||||||||    
T  27675501 tgattcaattttagatatgcatcaatagaattgtttctc 27675539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 218 - 341
Target Start/End: Complemental strand, 28102139 - 28102017
Alignment:
Q  218 atacgtatcctagaaatgatgaagggtaagaaagtgagacaatgttgtaaaaatttagtagaaatgtatacgaatcaattttagatatgaatctgtaaaa 317  Q
    ||||||| | || ||| |||||||||||| ||| |||||| ||||| | |||||| ||| || |||||||  | ||||||||| ||||||||  ||||||    
T  28102139 atacgtaacttataaaagatgaagggtaaaaaa-tgagacgatgttatgaaaattcagttgagatgtatattattcaattttatatatgaataagtaaaa 28102041  T
Q  318 ttgtttctcgatgaactacttaaa 341  Q
    |||||||||||||||| |||||||    
T  28102040 ttgtttctcgatgaaccacttaaa 28102017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 355 - 459
Target Start/End: Complemental strand, 47922805 - 47922699
Alignment:
Q  355 taatgaagggtaattagtgcttattttcttcaagtgctttacatatat--aagttttagtataaattttttgttaacgtatcttagccgtatcgtatcct 452  Q
    |||||||| ||||| | |||||||||||||||| |  |||| ||| ||  | |||||| ||||||||||||||||||||||| || ||||||||||| ||    
T  47922805 taatgaagagtaatcaatgcttattttcttcaaatattttagatacatgtatgttttattataaattttttgttaacgtatcatatccgtatcgtattct 47922706  T
Q  453 aaatttt 459  Q
    |||||||    
T  47922705 aaatttt 47922699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 79 - 149
Target Start/End: Complemental strand, 4214204 - 4214134
Alignment:
Q  79 ataccgatacttcatggatacttgcggatacgtacccacgaagtatcataattaattattttaaattttaa 149  Q
    |||||||||||||| || |||| || ||||||||||||||||||| || ||||||||||||||| ||||||    
T  4214204 ataccgatacttcacgggtactcgcagatacgtacccacgaagtaccagaattaattattttaatttttaa 4214134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 398 - 469
Target Start/End: Complemental strand, 54163162 - 54163089
Alignment:
Q  398 tatataagtttta--gtataaattttttgttaacgtatcttagccgtatcgtatcctaaattttaaaaattttg 469  Q
    |||||||||||||  |||||||||||||||||| ||||||||||  ||||||||||||| ||||| ||||||||    
T  54163162 tatataagttttatagtataaattttttgttaaagtatcttagctatatcgtatcctaagttttataaattttg 54163089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 404 - 481
Target Start/End: Original strand, 42399349 - 42399426
Alignment:
Q  404 agttttagtataaattttttgttaacgtatcttagccgtatcgtatcctaaattttaaaaattttgcgtattcacgta 481  Q
    ||||||||| ||||  ||||||| ||||||||||| ||||||||||||||||||  |||||||| |||||| ||||||    
T  42399349 agttttagtttaaaaattttgttgacgtatcttagtcgtatcgtatcctaaattaaaaaaatttagcgtatccacgta 42399426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 399 - 464
Target Start/End: Complemental strand, 47724635 - 47724571
Alignment:
Q  399 atataagttttagtataaattttttgttaacgtatcttagccgtatcgtatcctaaattttaaaaa 464  Q
    |||||| |||||||||||||  ||||||||||||| |||||||||||||||||| |||||||||||    
T  47724635 atataaattttagtataaataatttgttaacgtatattagccgtatcgtatcct-aattttaaaaa 47724571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 412 - 470
Target Start/End: Original strand, 6332305 - 6332363
Alignment:
Q  412 tataaattttttgttaacgtatcttagccgtatcgtatcctaaattttaaaaattttgc 470  Q
    ||||||| |||||||||| | |||||||||||| |||||||||||||||||| ||||||    
T  6332305 tataaatattttgttaacttttcttagccgtattgtatcctaaattttaaaatttttgc 6332363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 356 - 434
Target Start/End: Original strand, 22588325 - 22588405
Alignment:
Q  356 aatgaagggtaattagtgcttattttcttcaagtgctttacata--tataagttttagtataaattttttgttaacgtatc 434  Q
    ||||||| ||||| | || |||||||||||||||  |||| |||  ||||||||||||||||| |||||||||||||||||    
T  22588325 aatgaagagtaatcaatgtttattttcttcaagtattttatatacatataagttttagtataatttttttgttaacgtatc 22588405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 375 - 460
Target Start/End: Complemental strand, 25059166 - 25059081
Alignment:
Q  375 ttattttcttcaagtgctttacatatataagttttagtataaattttttgttaacgtatcttagccgtatcgtatcctaaatttta 460  Q
    |||||||||||||||  |||||||| |||   ||||||||||| ||||||||||| |||||||  ||||| |||| ||||||||||    
T  25059166 ttattttcttcaagtattttacatacatataatttagtataaaatttttgttaacatatcttaatcgtattgtattctaaatttta 25059081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 418 - 503
Target Start/End: Original strand, 49195925 - 49196010
Alignment:
Q  418 ttttttgttaacgtatcttagccgtatcgtatcctaaattttaaaaattttgcgtattcacgtatctgtatcgtatcgtacccgca 503  Q
    |||||||||||  ||||||||||||||||||||||||||||| ||||  ||   |||||| |||| ||| ||||||||||| ||||    
T  49195925 ttttttgttaatatatcttagccgtatcgtatcctaaatttttaaaaacttatatattcatgtatatgtttcgtatcgtactcgca 49196010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 355 - 459
Target Start/End: Complemental strand, 7208324 - 7208217
Alignment:
Q  355 taatgaagggtaattagtgcttattttcttcaagtgctttacata--tataagttttagtataaatttttt-gttaacgtatcttagccgtatcgtatcc 451  Q
    |||||||| ||||| | || ||||||||||||| |  ||||||||  |||||||||||| |||| |||||| ||||| ||||| || |||||||||||||    
T  7208324 taatgaagagtaatcaatgtttattttcttcaaatattttacatacatataagttttaggataattttttttgttaatgtatcctaaccgtatcgtatcc 7208225  T
Q  452 taaatttt 459  Q
    ||| ||||    
T  7208224 taattttt 7208217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 355 - 464
Target Start/End: Complemental strand, 28101807 - 28101696
Alignment:
Q  355 taatgaagggtaattagtgcttattttcttcaagtgctttacat--atataagttttagtataaattttttgttaacgtatcttagccgtatcgtatcct 452  Q
    |||| ||| ||||| | ||||||||||||||||||  ||| |||  ||||||||||||| || |   ||||| ||| ||||||||| |||||||||||||    
T  28101807 taataaagagtaatcaatgcttattttcttcaagtattttgcatgcatataagttttaggattacaattttggtaatgtatcttagtcgtatcgtatcct 28101708  T
Q  453 aaattttaaaaa 464  Q
    ||||| ||||||    
T  28101707 aaattgtaaaaa 28101696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 102 - 142
Target Start/End: Complemental strand, 47724841 - 47724801
Alignment:
Q  102 gcggatacgtacccacgaagtatcataattaattattttaa 142  Q
    ||||||||||||||||||||||||| |||||||||||||||    
T  47724841 gcggatacgtacccacgaagtatcagaattaattattttaa 47724801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 71 - 139
Target Start/End: Original strand, 53586253 - 53586321
Alignment:
Q  71 cgtatcgaataccgatacttcatggatacttgcggatacgtacccacgaagtatcataattaattattt 139  Q
    ||||||||||||||||||  || |||| || ||||||| | |||||| |||||||||||||||||||||    
T  53586253 cgtatcgaataccgatacgccacggatgctcgcggataggcacccaccaagtatcataattaattattt 53586321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 399 - 434
Target Start/End: Original strand, 1052556 - 1052591
Alignment:
Q  399 atataagttttagtataaattttttgttaacgtatc 434  Q
    ||||||||||||||||||||||||||||||||||||    
T  1052556 atataagttttagtataaattttttgttaacgtatc 1052591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 355 - 510
Target Start/End: Complemental strand, 2242683 - 2242523
Alignment:
Q  355 taatgaagggtaattagtgcttattttcttcaagtgctttacata--tataagttttagtataaattttttgttaacgtatcttagccgtatcgtatcct 452  Q
    |||||||| |||||  ||| | |||||||||||||  ||||||||  ||||||||||| |||||||||||  |||| ||||| || | |||| |||||||    
T  2242683 taatgaagagtaatcggtgttaattttcttcaagtattttacatacatataagttttattataaatttttc-ttaatgtatcataac-gtattgtatcct 2242586  T
Q  453 aaattttaaaaattttgcgtattcacgta-----tctgtatcgtatcgtacccgcacccgtat 510  Q
    |||||||||||| |||| |||| ||| ||     | |||||||||||||||||| | ||||||    
T  2242585 aaattttaaaaaatttgtgtatccacatacccgttttgtatcgtatcgtacccgtatccgtat 2242523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 72 - 228
Target Start/End: Complemental strand, 34075438 - 34075281
Alignment:
Q  72 gtatcgaataccgatacttcatggatacttgcggatacgtacccacgaagtatcataattaattattttaaatttta--atcttttttatctgatacgta 169  Q
    |||||| ||||||||||| | ||||||||  |||||||||||||||  ||||||  ||||||||||||||| ||  |  || | ||||||| ||||| ||    
T  34075438 gtatcggataccgatactccgtggatactctcggatacgtacccacagagtatcggaattaattattttaatttaaaatatatattttatcggatactta 34075339  T
Q  170 tagaatattccacagatacaacaaggatacttataagatatttcacaaatacgtatcct 228  Q
    |   ||| || || ||||| |||  ||||||||||||||| |||||||| |||||||||    
T  34075338 tgagatactcgacggatac-acatagatacttataagatacttcacaaagacgtatcct 34075281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 377 - 529
Target Start/End: Original strand, 45774347 - 45774500
Alignment:
Q  377 attttcttcaagtgctttacatata--taagttttagtataaattttttgttaacgtatcttagccgtatcgtatcctaaattttaaaaattttgcgtat 474  Q
    |||||||| ||||  ||||||||||  ||||| ||| ||||| ||||| ||||| ||||| || ||||| |||||||||||||| || || ||   ||||    
T  45774347 attttcttgaagtattttacatatagataagtattattataagttttt-gttaatgtatcctaaccgtaccgtatcctaaatttaaagaaattcatgtat 45774445  T
Q  475 tcacgtatctgtatcgtatcgtacccgcacccgtatctgtatctgggcttcatag 529  Q
     | |||| | ||||||| |  ||| |||||||||||||||||| |||||||||||    
T  45774446 ccgcgtagccgtatcgtttgatactcgcacccgtatctgtatcggggcttcatag 45774500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 96 - 150
Target Start/End: Complemental strand, 2243118 - 2243064
Alignment:
Q  96 atacttgcggatacgtacccacgaagtatcataattaattattttaaattttaat 150  Q
    ||||| ||| ||||||||||| ||||||||| ||||||||||||||| |||||||    
T  2243118 atactcgcgaatacgtacccatgaagtatcagaattaattattttaatttttaat 2243064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 378 - 457
Target Start/End: Complemental strand, 15476522 - 15476442
Alignment:
Q  378 ttttcttcaagtgctttacata--tataagttttagtataaattttttgttaacgtatcttagccgtatcgtatcctaaatt 457  Q
    ||||||||||||  ||||||||  ||||| ||||| ||||||||||| ||||||||||| || |||||| ||||||||||||    
T  15476522 ttttcttcaagtattttacatacatataaattttattataaattttt-gttaacgtatcctaaccgtattgtatcctaaatt 15476442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 409 - 503
Target Start/End: Original strand, 44746772 - 44746866
Alignment:
Q  409 tagtataaattttttgttaacgtatcttagccgtatcgtatcctaaattttaaaaattttgcgtattcacgtatctgtatcgtatcgtacccgca 503  Q
    |||||||||| |||||||||||| | ||||  ||| | |||||| ||||||||||||||  | | ||| ||||||||||||||| | ||||||||    
T  44746772 tagtataaatattttgttaacgtgttttagtggtaccatatcctgaattttaaaaatttcactttttctcgtatctgtatcgtaacttacccgca 44746866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 190 - 300
Target Start/End: Original strand, 45661801 - 45661911
Alignment:
Q  190 acaaggatacttataagatatttcacaaatacgtatcctagaaatgatgaagggtaagaaagtgagacaatgttgtaaaaatttagtagaaatgtatacg 289  Q
    |||| ||||||| || |||| |||| | |||  ||||||| ||| ||||||| |||| |||||||||||||||||| |||||| ||| | || ||||| |    
T  45661801 acaatgatacttttacgatacttcaaagatatctatcctataaaagatgaagagtaaaaaagtgagacaatgttgtgaaaattcagtgggaacgtatatg 45661900  T
Q  290 aatcaatttta 300  Q
    | |||||||||    
T  45661901 attcaatttta 45661911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 93 - 149
Target Start/End: Original strand, 27675303 - 27675359
Alignment:
Q  93 tggatacttgcggatacgtacccacgaagtatcataattaattattttaaattttaa 149  Q
    |||||||| ||||||||||||||| ||||||||  || |||||||||||| ||||||    
T  27675303 tggatactcgcggatacgtacccatgaagtatcggaaataattattttaatttttaa 27675359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 372 - 437
Target Start/End: Original strand, 44987611 - 44987678
Alignment:
Q  372 tgcttattttcttcaagtgctttacat--atataagttttagtataaattttttgttaacgtatctta 437  Q
    ||||||||||||||||||  |||||||  |||||||||||||||||    ||||||||||||||||||    
T  44987611 tgcttattttcttcaagtattttacatgaatataagttttagtatatgaattttgttaacgtatctta 44987678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 377 - 438
Target Start/End: Original strand, 45662010 - 45662073
Alignment:
Q  377 attttcttcaagtgctttacat--atataagttttagtataaattttttgttaacgtatcttag 438  Q
    ||||||||||| |  |||||||  |||||||||||||||||||  |||||||||||||||||||    
T  45662010 attttcttcaaatattttacatgcatataagttttagtataaaaattttgttaacgtatcttag 45662073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 402 - 433
Target Start/End: Original strand, 1052522 - 1052553
Alignment:
Q  402 taagttttagtataaattttttgttaacgtat 433  Q
    ||||||||||||||||||||||||||||||||    
T  1052522 taagttttagtataaattttttgttaacgtat 1052553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 399 - 474
Target Start/End: Complemental strand, 43770348 - 43770273
Alignment:
Q  399 atataagttttagtataaattttttgttaacgtatcttagccgtatcgtatcctaaattttaaaaattttgcgtat 474  Q
    |||||| ||||||||||||| || ||||||| ||||||| ||||||  ||| || |||||||| ||||| ||||||    
T  43770348 atataaattttagtataaatattatgttaacatatcttaaccgtattatattctgaattttaagaatttcgcgtat 43770273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 372 - 463
Target Start/End: Original strand, 4776091 - 4776184
Alignment:
Q  372 tgcttattttcttcaagtgctttacata--tataagttttagtataaattttttgttaacgtatcttagccgtatcgtatcctaaattttaaaa 463  Q
    ||||||||||  ||||||  ||||||||  ||||||||||| ||||||  | || ||||||||| ||||| | ||||||| |||||||||||||    
T  4776091 tgcttatttttatcaagtattttacatacatataagttttaatataaaaatattattaacgtattttagctgcatcgtattctaaattttaaaa 4776184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 398 - 464
Target Start/End: Complemental strand, 25204377 - 25204311
Alignment:
Q  398 tatataagttttagtataaattttttgttaacgtatcttagccgtatcgtatcctaaattttaaaaa 464  Q
    ||||||| |||||||||||| ||||| | || ||||||||  |||||||||| ||||||||| ||||    
T  25204377 tatataaattttagtataaaatttttatcaatgtatcttactcgtatcgtattctaaatttttaaaa 25204311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 48 - 141
Target Start/End: Complemental strand, 7208786 - 7208693
Alignment:
Q  48 atactgcaaaatggaaacgtacccgtatcgaataccgatacttcatggatacttgcggatacgtacccacgaagtatcataattaattatttta 141  Q
    ||||| ||||| ||| |||||| ||||||| ||| ||||||||||  ||||||  | ||||  || |||||||||||  |||||||||||||||    
T  7208786 atactccaaaacggagacgtacacgtatcggatatcgatacttcacagatactctcagatatatatccacgaagtattgtaattaattatttta 7208693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 404 - 461
Target Start/End: Complemental strand, 9656245 - 9656188
Alignment:
Q  404 agttttagtataaattttttgttaacgtatcttagccgtatcgtatcctaaattttaa 461  Q
    |||||||  ||||||||||||||||||||||||| || ||| | ||| ||||||||||    
T  9656245 agttttatcataaattttttgttaacgtatcttaaccatattgaatcttaaattttaa 9656188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 418 - 483
Target Start/End: Original strand, 24784965 - 24785030
Alignment:
Q  418 ttttttgttaacgtatcttagccgtatcgtatcctaaattttaaaaattttgcgtattcacgtatc 483  Q
    |||||| ||||||||||| |||||||||||||| | | |||| |||||||| |||||  |||||||    
T  24784965 ttttttattaacgtatctcagccgtatcgtatcttgatttttgaaaattttccgtatcaacgtatc 24785030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 418 - 483
Target Start/End: Complemental strand, 24823301 - 24823236
Alignment:
Q  418 ttttttgttaacgtatcttagccgtatcgtatcctaaattttaaaaattttgcgtattcacgtatc 483  Q
    |||||| ||||||||||| |||||||||||||| | | |||| |||||||| |||||  |||||||    
T  24823301 ttttttattaacgtatctcagccgtatcgtatcttgatttttgaaaattttccgtatcaacgtatc 24823236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 292 - 345
Target Start/End: Original strand, 24917590 - 24917643
Alignment:
Q  292 tcaattttagatatgaatctgtaaaattgtttctcgatgaactacttaaaatta 345  Q
    ||||||||||||||  ||  ||| |||||||||||||||||| |||||||||||    
T  24917590 tcaattttagatatacattagtagaattgtttctcgatgaaccacttaaaatta 24917643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 418 - 483
Target Start/End: Complemental strand, 42630079 - 42630014
Alignment:
Q  418 ttttttgttaacgtatcttagccgtatcgtatcctaaattttaaaaattttgcgtattcacgtatc 483  Q
    |||||| ||||||||||| |||||||||||||| ||| |||| ||| |||| |||||  |||||||    
T  42630079 ttttttattaacgtatctcagccgtatcgtatcttaatttttgaaatttttccgtatcgacgtatc 42630014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 55 - 139
Target Start/End: Original strand, 1052196 - 1052280
Alignment:
Q  55 aaaatggaaacgtacccgtatcgaataccgatacttcatggatacttgcggatacgtacccacgaagtatcataattaattattt 139  Q
    |||||||| |||||||||||| | |||||||||||  | ||||| | ||||||||| ||  ||||||||||  | ||||||||||    
T  1052196 aaaatggagacgtacccgtattggataccgatactctacggatattcgcggatacgcactaacgaagtatcggagttaattattt 1052280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 231 - 287
Target Start/End: Complemental strand, 2242978 - 2242922
Alignment:
Q  231 aaatgatgaagggtaagaaagtgagacaatgttgtaaaaatttagtagaaatgtata 287  Q
    ||||||||||  |||| |||||||||||||||| |||||||||| || | |||||||    
T  2242978 aaatgatgaacagtaaaaaagtgagacaatgttataaaaatttattatagatgtata 2242922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 163 - 287
Target Start/End: Complemental strand, 4110374 - 4110251
Alignment:
Q  163 atacgtatagaatattccacagatacaacaaggatacttataagatatttcacaaatacgtatcctagaaatgatgaagggtaagaaagtgagacaatgt 262  Q
    |||| ||||| |||||||||||||| || ||| ||| || ||||||| || | | ||| ||||| |  ||| ||||||| |||| ||||||  |||||||    
T  4110374 atacttataggatattccacagatagaa-aagtatatttgtaagatactttaaagatatgtatcttttaaaagatgaagagtaaaaaagtggtacaatgt 4110276  T
Q  263 tgtaaaaatttagtagaaatgtata 287  Q
    ||| |||||| ||| ||||||||||    
T  4110275 tgtgaaaattaagtggaaatgtata 4110251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 243 - 355
Target Start/End: Original strand, 6008221 - 6008333
Alignment:
Q  243 gtaagaaagtgagacaatgttgtaaaaatttagtagaaatgtatacgaatcaattttagatatgaatctgtaaaattgtttctcgatgaactacttaaaa 342  Q
    |||| |||||||| |||| |  |||| |||||| ||| | | ||| || |||||| |||||||| ||   || |||||||||||||||||| ||||||||    
T  6008221 gtaaaaaagtgaggcaatttgttaaacatttaggagagagggatatgattcaattatagatatgtataactagaattgtttctcgatgaaccacttaaaa 6008320  T
Q  343 ttacacttattgt 355  Q
    ||| |||| ||||    
T  6008321 ttatacttcttgt 6008333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 80 - 140
Target Start/End: Complemental strand, 28103669 - 28103609
Alignment:
Q  80 taccgatacttcatggatacttgcggatacgtacccacgaagtatcataattaattatttt 140  Q
    |||||||||||||| |||||| |||  |||||||||| ||| |||  ||||||||||||||    
T  28103669 taccgatacttcatagatactcgcgagtacgtacccatgaaatattgtaattaattatttt 28103609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 418 - 474
Target Start/End: Original strand, 49470782 - 49470838
Alignment:
Q  418 ttttttgttaacgtatcttagccgtatcgtatcctaaattttaaaaattttgcgtat 474  Q
    |||||| ||||||||||| |||||||||||||| ||| |||| ||| |||| |||||    
T  49470782 ttttttattaacgtatctcagccgtatcgtatcttaatttttgaaatttttccgtat 49470838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 377 - 434
Target Start/End: Complemental strand, 53018349 - 53018290
Alignment:
Q  377 attttcttcaagtgctttacata--tataagttttagtataaattttttgttaacgtatc 434  Q
    |||||||||||||  ||||||||  ||||||||||| ||||| ||||||| |||||||||    
T  53018349 attttcttcaagtattttacatacatataagttttattataatttttttggtaacgtatc 53018290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0565 (Bit Score: 94; Significance: 1e-45; HSPs: 2)
Name: scaffold0565
Description:

Target: scaffold0565; HSP #1
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 79 - 332
Target Start/End: Original strand, 7753 - 8008
Alignment:
Q  79 ataccgatacttcatggatacttgcggatacgtacccacgaagtatcataattaattattttaaattttaatc--ttttttatctgatacgtatagaata 176  Q
    |||||||||||  | ||||||| ||||||||||| ||||||||||||  ||||||||||||||| |||||||   | |||||||  |||| |||   |||    
T  7753 ataccgatactctacggatactcgcggatacgtatccacgaagtatcggaattaattattttaatttttaataaatattttatcgaatacttatgtgata 7852  T
Q  177 ttccacagatacaacaaggatacttataagatatttcacaaatacgtatcctagaaat-gatgaagggtaagaaagtgagacaatgttgtaaaaatttag 275  Q
     |||||||||||| ||||||||||| ||||||| |||||| | ||||||||||||||  ||||||| |||| ||||||||||||||||||||||||| |     
T  7853 ctccacagataca-caaggatacttctaagatacttcacagacacgtatcctagaaaaagatgaagagtaaaaaagtgagacaatgttgtaaaaattcat 7951  T
Q  276 tagaaatgtatacgaatcaattttagatatgaatctgtaaaattgtttctcgatgaa 332  Q
    || | ||||||| || ||||||||||||||| |||  || |||||||||||||||||    
T  7952 tatagatgtatatgactcaattttagatatgcatcaatagaattgtttctcgatgaa 8008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0565; HSP #2
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 399 - 511
Target Start/End: Original strand, 8274 - 8388
Alignment:
Q  399 atataagttttagtataaattttttgttaacgtatcttagccgtatcgtatcctaaa---ttttaaaaattttgcgtattcacgtatctgtatcgtatcg 495  Q
    |||||| ||||| |||||||||| ||||||||||||||| |||||||||||| ||||   |   |||||    | |||| | |||||| |||||||||||    
T  8274 atataacttttattataaatttt-tgttaacgtatcttaaccgtatcgtatcttaaaccctaaaaaaaaaaacgtgtatccgcgtatccgtatcgtatcg 8372  T
Q  496 tacccgcacccgtatc 511  Q
    ||||||||||||||||    
T  8373 tacccgcacccgtatc 8388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 94; Significance: 1e-45; HSPs: 52)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 79 - 352
Target Start/End: Complemental strand, 31513890 - 31513615
Alignment:
Q  79 ataccgatacttcatggatacttgcggatacgtacccacgaagtatcataattaattattttaaattttaatc--ttttttatctgatacgtatagaata 176  Q
    |||||||||||| | ||||||| |||||||| || ||||||| ||||  ||||||||||||||| |||||||   | ||||||| ||||| |||   |||    
T  31513890 ataccgatactttacggatactcgcggatacatatccacgaactatcggaattaattattttaatttttaataaatattttatcggatacttatgtgata 31513791  T
Q  177 ttccacagatacaacaaggatacttataagatatttcacaaatacgtatcctagaaat-gatgaagggtaagaaagtgagacaatgttgtaaaaatttag 275  Q
     |||||||||||| ||||||||||| ||||||| |||||| | ||||||||||||||  ||||| | |||| |||||||||||||||||||||||||||     
T  31513790 ctccacagataca-caaggatacttctaagatacttcacagacacgtatcctagaaaaagatgaggagtaaaaaagtgagacaatgttgtaaaaatttat 31513692  T
Q  276 tagaaatgtatacgaatcaattttagatatgaatctgtaaaattgtttctcgatgaactacttaaaattacacttat 352  Q
    || |  |||||| || ||||||||||||||| |||  || |||||||||||||||||  | ||||||||| ||||||    
T  31513691 tataggtgtatatgactcaattttagatatgcatcaatagaattgtttctcgatgaaacagttaaaattatacttat 31513615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 54 - 355
Target Start/End: Original strand, 14286844 - 14287147
Alignment:
Q  54 caaaatggaaacgtacccgtatcgaataccgatacttcatggatacttgcggatacgtacccacgaagtatcataattaattattttaaattttaa--tc 151  Q
    ||||| ||| |||||||||||||| ||||| ||||| || ||||||| |||||||| ||| || ||||||||  ||||||||||||||| ||  ||  |     
T  14286844 caaaacggagacgtacccgtatcggataccaatactccacggatactcgcggatacatactcatgaagtatcggaattaattattttaatttaaaaaata 14286943  T
Q  152 ttttttatctgatacgtatagaatattccacagatacaacaaggatacttataagatatttcacaaatacgtatcctagaaat-gatgaagggtaagaaa 250  Q
    | | ||||| ||||| ||||  ||| |||| ||||||| ||| ||||||||||||||| ||| || ||| ||||||||||||  ||||||||| || |||    
T  14286944 tatattatcggatacttatatgatactccatagataca-caatgatacttataagatacttcgcatatatgtatcctagaaaaagatgaagggaaaaaaa 14287042  T
Q  251 gtgagacaatgttgtaaaaatttagtagaaatgtatacgaatcaattttagatatgaatctgtaaaattgtttctcgatgaactacttaaaattacactt 350  Q
    |||||||||||||||||||||| || ||| ||||||| ||  |||||||||||||| ||  ||| ||||||||| || ||||| ||||||||||| ||||    
T  14287043 gtgagacaatgttgtaaaaattcaggagagatgtatatgatgcaattttagatatgcattagtagaattgtttcacggtgaaccacttaaaattatactt 14287142  T
Q  351 attgt 355  Q
     ||||    
T  14287143 cttgt 14287147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 71 - 345
Target Start/End: Complemental strand, 11767926 - 11767650
Alignment:
Q  71 cgtatcgaataccgatacttcatggatacttgcggatacgtacccacgaagtatcataattaattattttaa--attttaatcttttttatctgatacgt 168  Q
    ||||||| |||||||||||| | ||||||| ||||||||| ||||||||||||||| |||||||||||| ||  |||||||     |||| | ||||| |    
T  11767926 cgtatcggataccgatactttacggatactcgcggatacgcacccacgaagtatcaaaattaattatttaaattattttaaaaaaatttaacggatactt 11767827  T
Q  169 atagaatattccacagatacaacaaggatacttataagatatttcacaaatacgtatcctagaaat-gatgaagggtaagaaagtgagacaatgttgtaa 267  Q
    |||  ||| |||||| ||| | ||| ||||||||||||||| |||| | ||||||||||||||||  ||||||| |||| || |||||||||||||||||    
T  11767826 atacgatactccacaaatata-caaagatacttataagatacttcagagatacgtatcctagaaaaagatgaagagtaaaaatgtgagacaatgttgtaa 11767728  T
Q  268 aaatttagtagaaatgtatacgaatcaattttagatatgaatctgtaaaattgtttctcgatgaactacttaaaatta 345  Q
    |||||  ||||  || |||| || ||||||||||||||| ||   || |||| ||||||||| ||| |||||||||||    
T  11767727 aaattcggtagcgatatatatgattcaattttagatatgcataactagaattttttctcgattaaccacttaaaatta 11767650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 96 - 343
Target Start/End: Complemental strand, 4973337 - 4973086
Alignment:
Q  96 atacttgcggatacgtacccacgaagtatcataattaattattttaaattttaatc---ttttttatctgatacgtatagaatattccacagatacaaca 192  Q
    ||||| ||||||||||||||||||| ||| | |||||||||||| |||||||||     | ||||||| ||||| ||||  ||| |||||| ||||| ||    
T  4973337 atactcgcggatacgtacccacgaaatatgagaattaattattt-aaattttaaaaaaatattttatcagatacttatatgatactccacaaataca-ca 4973240  T
Q  193 aggatacttataagatatttcacaaatacgtatcctagaaatga---tgaagggtaagaaagtgagacaatgttgtaaaaatttagtagaaatgtatacg 289  Q
    | ||||||||||||||| || ||| ||| ||||||||||||  |   ||||||| || ||||||||||||| ||||||||||| ||| || || |||| |    
T  4973239 aagatacttataagatactttacatatatgtatcctagaaaaaaaaatgaagggcaataaagtgagacaatattgtaaaaattcagtggagatatatatg 4973140  T
Q  290 aatcaattttagatatgaatctgtaaaattgtttctcgatgaactacttaaaat 343  Q
    | ||||||||||||||  ||||||| |||||||||||||||||| |||||||||    
T  4973139 attcaattttagatatacatctgtagaattgtttctcgatgaacaacttaaaat 4973086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 71 - 350
Target Start/End: Original strand, 40693772 - 40694054
Alignment:
Q  71 cgtatcgaataccgatacttcatggatacttgcggatacgtacccacgaagtatcataattaattattttaaattttaat--cttttttatctgatacgt 168  Q
    ||||||| ||||||||||| || ||||||| ||||||||||| |||||||||||   ||||||||||||||| |||||||   | ||||||| ||||| |    
T  40693772 cgtatcggataccgatactccacggatactcgcggatacgtatccacgaagtattggaattaattattttaatttttaataaatattttatcggatacat 40693871  T
Q  169 atagaatattccacagatacaacaaggatacttataagatatttcacaaatacgtatcctag-aaatgatgaagg-gtaagaaagtgagacaatgttgta 266  Q
    ||   ||| ||||| ||||| ||||| |||||| ||||||| |||||| | |||||| |||| |||  ||||||| |||| |||||||||||||||||||    
T  40693872 atgtgatactccacggatac-acaagaatacttctaagatacttcacagaaacgtattctagaaaaatatgaaggagtaaaaaagtgagacaatgttgta 40693970  T
Q  267 aaaatttagtagaaatgtatacgaatcaattttagatatgaatctgtaaaattgtttctcgatgaactacttaaaattacactt 350  Q
    |||||| | ||   ||||||| || ||||| ||||||||| |||  || |||||||| ||||||||  ||||||||||| ||||    
T  40693971 aaaattcattattgatgtatatgactcaatattagatatgcatcaatagaattgtttttcgatgaaacacttaaaattatactt 40694054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 71 - 355
Target Start/End: Original strand, 17116090 - 17116378
Alignment:
Q  71 cgtatcgaataccgatacttcatggatacttgcggatacgtacccacgaagtatcataattaattattttaaattttaatc--ttttttatctgatacgt 168  Q
    ||||||| |||||||||||||| ||||||| |||| |||||| ||||||||||||  ||||||||||||||| ||||| |   | ||||||| ||||| |    
T  17116090 cgtatcggataccgatacttcacggatactcgcgggtacgtatccacgaagtatcggaattaattattttaatttttattaaatattttatcggatactt 17116189  T
Q  169 atagaatattccacagatacaacaaggatacttataagatatttcacaaatacgtat--cctagaaat-gatgaagggtaagaaagtgagacaatgttgt 265  Q
    |    ||| |||||||||||| |||| |||||| ||||||| |||||| | ||||||  ||||||||  ||||||| |||| ||||||||| ||||||||    
T  17116190 aggtgatactccacagataca-caagaatacttctaagatacttcacatacacgtatatcctagaaaaagatgaagagtaaaaaagtgagataatgttgt 17116288  T
Q  266 aaaaatttagtagaaatgtatacgaatcaattttagatatgaatctgtaaaattgtttctcgatgaactacttaaaattacacttattgt 355  Q
    |||||||   || | ||||||| || ||||||||||||||| |||  || |||| ||| ||||||||  ||||||||||| |||| ||||    
T  17116289 aaaaattctttatagatgtatatgactcaattttagatatgcatcaatagaattatttttcgatgaaacacttaaaattatacttcttgt 17116378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 355 - 529
Target Start/End: Original strand, 10443754 - 10443930
Alignment:
Q  355 taatgaagggtaattagtgcttattttcttcaagtgctttacata--tataagttttagtataaattttttgttaacgtatcttagccgtatcgtatcct 452  Q
    |||||||||||| | | ||||||||||||||||||  |||| |||  ||||||||||||||| ||  ||| |||||| |||| |||||||||||||||||    
T  10443754 taatgaagggtagtcaatgcttattttcttcaagtattttatatacatataagttttagtatgaaaatttcgttaacttatcatagccgtatcgtatcct 10443853  T
Q  453 aaattttaaaaattttgcgtattcacgtatctgtatcgtatcgtacccgcacccgtatctgtatctgggcttcatag 529  Q
    |||||| ||||| |   ||||| | |||| ||||||||||||||||||||||||||||  ||||| |||||||||||    
T  10443854 aaatttaaaaaaatccacgtatccgcgtacctgtatcgtatcgtacccgcacccgtattcgtatccgggcttcatag 10443930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 103 - 355
Target Start/End: Original strand, 13558358 - 13558610
Alignment:
Q  103 cggatacgtacccacgaagtatcataattaattattttaaatttt-aatcttttttatctgatacgtatagaatattccacagatacaacaaggatactt 201  Q
    |||||||| | ||||||||||||  |||||||||||| || |||| ||   | |||| | ||||| ||||  ||| ||| |||||||| |||||||| ||    
T  13558358 cggatacgcatccacgaagtatcggaattaattatttaaattttttaaaaatatttaacggatacttatacgatactccgcagataca-caaggataatt 13558456  T
Q  202 ataagatatttcacaaatacgtatcctagaaat-gatgaagggtaagaaagtgagacaatgttgtaaaaatttagtagaaatgtatacgaatcaatttta 300  Q
    ||| |||| |||||| ||| |||||||| |||  ||||||| |||| ||||||||||||||||||||| ||| | |||  ||||||| || |||||||||    
T  13558457 ata-gatacttcacatatatgtatcctaaaaaaagatgaagagtaaaaaagtgagacaatgttgtaaacattcaatagggatgtatatgattcaatttta 13558555  T
Q  301 gatatgaatctgtaaaattgtttctcgatgaactacttaaaattacacttattgt 355  Q
    |||||| |||  ||||||||||||||||||||| ||||||||||| |||| ||||    
T  13558556 gatatgcatcactaaaattgtttctcgatgaaccacttaaaattatacttcttgt 13558610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 102 - 343
Target Start/End: Original strand, 4966555 - 4966800
Alignment:
Q  102 gcggatacgtacccacgaagtatcataattaattattttaaattttaatc-----ttttttatctgatacgtatagaatattccacagatacaacaagga 196  Q
    ||||||||||||||||||||||| | |||||||||||| |||||||||       |  |||||| ||||| ||||  ||| |||||| ||||| ||||||    
T  4966555 gcggatacgtacccacgaagtatgagaattaattattt-aaattttaaaaaaaaataatttatcggatacttatatgatactccacaaataca-caagga 4966652  T
Q  197 tacttataagatatttcacaaatacgtatcctagaaatga--tgaagggtaagaaagtgagacaatgttgtaaaaatttagtagaaatgtatacgaatca 294  Q
    ||||||||||||| || ||| ||| ||||||||||||  |  |||||||||| ||||||||||||| |||||||| || | || | || |||| || |||    
T  4966653 tacttataagatactttacatatatgtatcctagaaaaaaaatgaagggtaataaagtgagacaatattgtaaaa-ttcactatagatatatatgattca 4966751  T
Q  295 attttagatatgaatctgtaaaattgtttctcgatgaactacttaaaat 343  Q
    |||||||||||  ||||||| |||||||||||||||||| |||||||||    
T  4966752 attttagatatacatctgtagaattgtttctcgatgaacaacttaaaat 4966800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 196 - 350
Target Start/End: Original strand, 16122756 - 16122912
Alignment:
Q  196 atacttataagatatttcacaaatacgtatcctag---aaatgatgaagggtaagaaagtgagacaatgttgtaaaaatttagtagaaatgtatacgaat 292  Q
    |||||||||||||| |||||| ||||||||| |||   |||  ||||||||||| |||||||||||||||||| ||| || | | |||||||||| || |    
T  16122756 atacttataagatacttcacatatacgtatcataggacaaaaaatgaagggtaaaaaagtgagacaatgttgtgaaa-ttcattggaaatgtatatgatt 16122854  T
Q  293 caattttagatatgaatctgtaaaattgtttctcgatgaactacttaaaattacactt 350  Q
    |||||||||||||| ||| ||| |||||||||| ||||||| |||| |||||||||||    
T  16122855 caattttagatatgcatcagtataattgtttcttgatgaaccacttcaaattacactt 16122912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 399 - 501
Target Start/End: Complemental strand, 22790906 - 22790805
Alignment:
Q  399 atataagttttagtataaattttttgttaacgtatcttagccgtatcgtatcctaaattttaaaaattttgcgtattcacgtatctgtatcgtatcgtac 498  Q
    |||||| ||||||||||||| ||||||||| ||||||||||| ||||||||||| ||||||||||||||||||||| | |||||  ||||||||||||||    
T  22790906 atataaattttagtataaatattttgttaaagtatcttagccatatcgtatcct-aattttaaaaattttgcgtatccgcgtattcgtatcgtatcgtac 22790808  T
Q  499 ccg 501  Q
    |||    
T  22790807 ccg 22790805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 355 - 517
Target Start/End: Original strand, 41827994 - 41828152
Alignment:
Q  355 taatgaagggtaattagtgcttattttcttcaagtgctttacata--tataagttttagtataaattttttgttaacgtatcttagccgtatcgtatcct 452  Q
    |||||||| ||||||| |||| |||||||||||||  ||||||||  ||||||||||| |||||||||||  ||||| |||||||  |||||||||||||    
T  41827994 taatgaagagtaattaatgctaattttcttcaagtattttacatacatataagttttattataaattttta-ttaacttatcttaatcgtatcgtatcct 41828092  T
Q  453 aaattttaaaaattttgcgtattcacgtatctgtatcgtatcgtacccgcacccgtatctgtatc 517  Q
    |||||| ||||| |||| |||| | |||| |     |||||||||||||||||||||||||||||    
T  41828093 aaatttaaaaaaatttgtgtatccgcgtacc-----cgtatcgtacccgcacccgtatctgtatc 41828152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 355 - 528
Target Start/End: Complemental strand, 31513428 - 31513254
Alignment:
Q  355 taatgaagggtaattagtgcttattttcttcaagtgctttacata--tataagttttagtataaattttttgttaacgtatcttagccgtatcgtatcct 452  Q
    |||||||| ||||| | || | |||||||||||||  ||||||||  ||||||||||| ||||||||||| ||||||||||| || |||||| ||||| |    
T  31513428 taatgaagagtaatcaatgttaattttcttcaagtattttacatacatataagttttattataaattttt-gttaacgtatcataaccgtattgtatctt 31513330  T
Q  453 aaattttaaaaattttgcgtattcacgtatctgtatcgtatcgtacccgcacccgtatctgtatctgggcttcata 528  Q
    |||||||||||| || ||||||   |||| |||||||||||| ||| |||||  |||||||||||  |||||||||    
T  31513329 aaattttaaaaaattcgcgtatctgcgtacctgtatcgtatcatactcgcacttgtatctgtatcgaggcttcata 31513254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 399 - 470
Target Start/End: Original strand, 31183818 - 31183889
Alignment:
Q  399 atataagttttagtataaattttttgttaacgtatcttagccgtatcgtatcctaaattttaaaaattttgc 470  Q
    |||||| |||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31183818 atataaattttagaataaatattttgttaacgtatcttagccgtatcgtatcctaaattttaaaaattttgc 31183889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 195 - 345
Target Start/End: Complemental strand, 38683077 - 38682926
Alignment:
Q  195 gatacttataagatatttcacaaatacgtatcctagaaat-gatgaagggtaagaaagtgagacaatgttgtaaaaatttagtagaaatgtatacgaatc 293  Q
    ||||||| ||| ||| |||||| ||| ||||||||||||  |||||||||||| ||| ||| | |||||||||| |||||||| || ||||||| || ||    
T  38683077 gatacttctaaaatacttcacagatatgtatcctagaaaaagatgaagggtaaaaaaatgaaataatgttgtaacaatttagtggagatgtatatgattc 38682978  T
Q  294 aattttagatatgaatctgtaaaattgtttctcgatgaactacttaaaatta 345  Q
    ||||||||||||| |||  || |||||||||||||| ||| |||||||||||    
T  38682977 aattttagatatgcatcaatagaattgtttctcgattaaccacttaaaatta 38682926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 399 - 501
Target Start/End: Original strand, 50709816 - 50709917
Alignment:
Q  399 atataagttttagtataaattttttgttaacgtatcttagccgtatcgtatcctaaattttaaaaattttgcgtattcacgtatctgtatcgtatcgtac 498  Q
    |||||| ||||||||||||| |||| |||||||||||||||||||||||||||| |||||||||||||| | |||| | |||| | ||||||||||||||    
T  50709816 atataaattttagtataaatattttattaacgtatcttagccgtatcgtatcct-aattttaaaaatttcgtgtatccgcgtacccgtatcgtatcgtac 50709914  T
Q  499 ccg 501  Q
    |||    
T  50709915 ccg 50709917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 358 - 530
Target Start/End: Original strand, 2137127 - 2137300
Alignment:
Q  358 tgaagggtaattagtgcttattttcttcaagtgctttacat--atataagttttagtataaattttttgttaacgtatcttagccgtatcgtatcctaaa 455  Q
    ||||| ||||||| |||||||||| |||||||  |||||||  |||||| ||| || |||||| ||||||||||||||||||| ||||| ||||||||||    
T  2137127 tgaagagtaattaatgcttatttt-ttcaagtattttacatgcatataaattt-agcataaatattttgttaacgtatcttagtcgtattgtatcctaaa 2137224  T
Q  456 ttttaaaaattttgcgtattcacgtatctgtatcgtatcgtacccgcacccgta-tctgtatctgggcttcatagg 530  Q
    | | ||||| |||||||||   |||| | |||||||||||||| | |||||||| | |||||||| ||||||||||    
T  2137225 tataaaaaaatttgcgtatctgcgtaccagtatcgtatcgtactcacacccgtactatgtatctgagcttcatagg 2137300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 375 - 464
Target Start/End: Complemental strand, 11767560 - 11767469
Alignment:
Q  375 ttattttcttcaagtgctttacata--tataagttttagtataaattttttgttaacgtatcttagccgtatcgtatcctaaattttaaaaa 464  Q
    |||||||||||||||  ||||||||  |||| |||||||||||||  |||||||||||||||||| ||||||||||||||||||||| ||||    
T  11767560 ttattttcttcaagtattttacatacatatatgttttagtataaaaattttgttaacgtatcttaaccgtatcgtatcctaaattttgaaaa 11767469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 399 - 523
Target Start/End: Original strand, 17116623 - 17116746
Alignment:
Q  399 atataagttttagtataaattttttgttaacgtatcttagccgtatcgtatcctaaattttaaaaattttgcgtattcacgtatctgtatcgtatcgtac 498  Q
    |||||||||| | |||||||||| |||||||||||| || |||||||||||| ||||||| ||||| || |||||| | |||| | ||||||||| ||||    
T  17116623 atataagtttaattataaatttt-tgttaacgtatcctaaccgtatcgtatcttaaatttaaaaaaattcgcgtatccgcgtacccgtatcgtattgtac 17116721  T
Q  499 ccgcacccgtatctgtatctgggct 523  Q
    |||||||| |||| ||||| |||||    
T  17116722 ccgcacccatatccgtatcggggct 17116746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 409 - 528
Target Start/End: Original strand, 13558703 - 13558821
Alignment:
Q  409 tagtataaattttttgttaacgtatcttagccgtatcgtatcctaaattttaaaaattttgcgtattcacgtatctgtatcgtatcgtacccgcacccgt 508  Q
    |||||||||||||||||| ||||||||||||| ||| |||||||||||||  |||| |   ||||| |||||| ||||||||||||||||| |||||| |    
T  13558703 tagtataaattttttgttcacgtatcttagccatattgtatcctaaatttggaaaa-tccacgtatccacgtacctgtatcgtatcgtacctgcaccctt 13558801  T
Q  509 atctgtatctgggcttcata 528  Q
    ||| ||||  ||||||||||    
T  13558802 atccgtattcgggcttcata 13558821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 399 - 501
Target Start/End: Complemental strand, 46594041 - 46593940
Alignment:
Q  399 atataagttttagtataaattttttgttaacgtatcttagccgtatcgtatcctaaattttaaaaattttgcgtattcacgtatctgtatcgtatcgtac 498  Q
    |||||| ||||||||||||| |||||||||||||||||| | |||||||||||| |||||||||||||| |||||| |  ||| |  |||||||||||||    
T  46594041 atataaattttagtataaatattttgttaacgtatcttaactgtatcgtatcct-aattttaaaaatttcgcgtatccgtgtacccatatcgtatcgtac 46593943  T
Q  499 ccg 501  Q
    |||    
T  46593942 ccg 46593940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 399 - 492
Target Start/End: Original strand, 30193732 - 30193824
Alignment:
Q  399 atataagttttagtataaattttttgttaacgtatcttagccgtatcgtatcctaaattttaaaaattttgcgtattcacgtatctgtatcgta 492  Q
    |||||| ||||||||||||| ||||||||| ||||||||||| ||||||||||| ||||||||||| ||| ||||| |||||| | ||||||||    
T  30193732 atataaattttagtataaatattttgttaatgtatcttagccctatcgtatcct-aattttaaaaaatttacgtatccacgtacccgtatcgta 30193824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 375 - 464
Target Start/End: Original strand, 4967030 - 4967120
Alignment:
Q  375 ttattttcttcaagtgctttacata--tataagttttagtataaattttttgttaacgtatcttagccgtatcgtatcctaaattttaaaaa 464  Q
    ||||||| |||||||| ||||||||  ||||||||||||||||| |||||| |||||||||| |||  ||||||||||||||||||||||||    
T  4967030 ttatttttttcaagtgttttacatacatataagttttagtataattttttt-ttaacgtatcctagttgtatcgtatcctaaattttaaaaa 4967120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 355 - 464
Target Start/End: Complemental strand, 25294437 - 25294327
Alignment:
Q  355 taatgaagggtaattagtgcttattttcttcaagtgctttacata--tataagttttagtataaattttttgttaacgtatcttagccgtatcgtatcct 452  Q
    |||||||| ||||| | || | |||||||| ||||  ||||||||  ||||||||||| ||||||||||| ||||||||||| || ||||||||||||||    
T  25294437 taatgaagagtaatcaatgttaattttcttgaagtattttacatacatataagttttattataaattttt-gttaacgtatcataaccgtatcgtatcct 25294339  T
Q  453 aaattttaaaaa 464  Q
    ||||||||||||    
T  25294338 aaattttaaaaa 25294327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 190 - 345
Target Start/End: Original strand, 270896 - 271050
Alignment:
Q  190 acaaggatacttataagatatttcacaaatacgtatcctagaaatgatgaagggtaagaaagtgagacaatgttgtaaaaatttagtagaaatgtatacg 289  Q
    ||||| |||||||||||||||||||||||| || ||| |||||| |||||||| ||| || || |||||||||||| ||||||   | || || |||| |    
T  270896 acaagaatacttataagatatttcacaaatgcgcatcttagaaaagatgaaggataa-aaggtaagacaatgttgtgaaaattcgatggagatatatatg 270994  T
Q  290 aatcaattttagatatgaatctgtaaaattgtttctcgatgaactacttaaaatta 345  Q
    | ||||||||||||||  ||| ||| |||| |||||| |||||  |||||||||||    
T  270995 attcaattttagatatacatcagtataattctttctctatgaatcacttaaaatta 271050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 190 - 305
Target Start/End: Original strand, 10443528 - 10443643
Alignment:
Q  190 acaaggatacttataagatatttcacaaatacgtatcctagaaatgatgaagggtaagaaagtgagacaatgttgtaaaaatttagtagaaatgtatacg 289  Q
    ||||||||||||  |||||| || ||| ||| |||||||||||| |||||||  ||| ||||||||| ||||||||| ||||  |||||| ||||||| |    
T  10443528 acaaggatacttccaagatactttacatatatgtatcctagaaaagatgaagtataaaaaagtgagagaatgttgtagaaatccagtagagatgtatatg 10443627  T
Q  290 aatcaattttagatat 305  Q
    | ||||||||||||||    
T  10443628 attcaattttagatat 10443643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 399 - 501
Target Start/End: Complemental strand, 17936193 - 17936092
Alignment:
Q  399 atataagttttagtataaattttttgttaacgtatcttagccgtatcgtatcctaaattttaaaaattttgcgtattcacgtatctgtatcgtatcgtac 498  Q
    |||||| ||||||||||||| ||  |||||||||||||||||||| |||||||| |||||||||||||||| ||||  ||||| |  |||||||||| ||    
T  17936193 atataaattttagtataaatattaggttaacgtatcttagccgtaccgtatcct-aattttaaaaattttgtgtatctacgtaccaatatcgtatcgcac 17936095  T
Q  499 ccg 501  Q
    |||    
T  17936094 ccg 17936092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 399 - 464
Target Start/End: Complemental strand, 4972827 - 4972762
Alignment:
Q  399 atataagttttagtataaattttttgttaacgtatcttagccgtatcgtatcctaaattttaaaaa 464  Q
    |||||||||||||||||||  ||||||||||||||| |||  ||||||||||||||||||||||||    
T  4972827 atataagttttagtataaaaattttgttaacgtatcctagttgtatcgtatcctaaattttaaaaa 4972762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 190 - 306
Target Start/End: Original strand, 13643778 - 13643894
Alignment:
Q  190 acaaggatacttataagatatttcacaaatacgtatccta-gaaatgatgaagggtaagaaagtgagacaatgttgtaaaaatttagtagaaatgtatac 288  Q
    |||||||||||| |||| || |||||| | ||||||| || |||| ||||||||| || |||||||||||| |||||||||||| | |||| |||||||     
T  13643778 acaaggatacttgtaaggtacttcacatacacgtatcataagaaaagatgaagggaaa-aaagtgagacaacgttgtaaaaattcaatagagatgtatat 13643876  T
Q  289 gaatcaattttagatatg 306  Q
    || |||||||||||||||    
T  13643877 gattcaattttagatatg 13643894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 238 - 355
Target Start/End: Original strand, 50726663 - 50726780
Alignment:
Q  238 gaagggtaagaaagtgagacaatgttgtaaaaatttagtagaaatgtatacgaatcaattttagatatgaatctgtaaaattgtttctcgatgaactact 337  Q
    |||| |||| ||||||||||||||||||||||||| | || | ||||||| || |||||||||||||||  ||  || |||||||||||||||||   ||    
T  50726663 gaagagtaaaaaagtgagacaatgttgtaaaaattcattatagatgtatatgactcaattttagatatgcgtcaatagaattgtttctcgatgaaacgct 50726762  T
Q  338 taaaattacacttattgt 355  Q
    |||||||| |||| ||||    
T  50726763 taaaattatacttcttgt 50726780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 355 - 464
Target Start/End: Original strand, 49899482 - 49899593
Alignment:
Q  355 taatgaagggtaattagtgcttattttcttcaagtgctttacata--tataagttttagtataaattttttgttaacgtatcttagccgtatcgtatcct 452  Q
    |||||||| ||||| | || |||||||||| ||||  ||||| ||  ||||||||||||||||||| ||| ||||| |||||||| |  |||||||||||    
T  49899482 taatgaagagtaatcaatgtttattttctttaagtattttacttacatataagttttagtataaatatttggttaatgtatcttaactttatcgtatcct 49899581  T
Q  453 aaattttaaaaa 464  Q
    ||||||||||||    
T  49899582 aaattttaaaaa 49899593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 399 - 466
Target Start/End: Complemental strand, 9380451 - 9380384
Alignment:
Q  399 atataagttttagtataaattttttgttaacgtatcttagccgtatcgtatcctaaattttaaaaatt 466  Q
    |||||||||||| |||||||||||||||||||||||| || | |||| ||| ||||||||||||||||    
T  9380451 atataagttttaatataaattttttgttaacgtatctaagtcatatcatattctaaattttaaaaatt 9380384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 64 - 141
Target Start/End: Complemental strand, 30902651 - 30902574
Alignment:
Q  64 acgtacccgtatcgaataccgatacttcatggatacttgcggatacgtacccacgaagtatcataattaattatttta 141  Q
    |||||| ||||||| |||| || ||||||  |||||| |||||||||||||||| |||||||| ||||||||||||||    
T  30902651 acgtacacgtatcggatacagaaacttcacagatactcgcggatacgtacccacaaagtatcagaattaattatttta 30902574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 73 - 355
Target Start/End: Complemental strand, 51899213 - 51898929
Alignment:
Q  73 tatcgaataccgatacttcatggatacttgcggatacgtacccacgaagtatcataattaattattttaaattttaa----tcttttttatctgatacgt 168  Q
    ||||| ||| ||||| |||| ||||||| | |||||| |||||||||||||||| ||||| ||||||||| ||  ||    | | ||||||| ||| | |    
T  51899213 tatcggatatcgatatttcagggatactcgtggatacatacccacgaagtatcagaattacttattttaatttaaaaaatatatattttatcggatgctt 51899114  T
Q  169 atagaatattccacagatacaacaaggatacttataagatatttcacaaatacgtatcctagaaatgatgaagggtaagaaagtgagacaatgttgtaaa 268  Q
     ||  ||| |||||||||||  ||||||| |||||||||||||||| ||||| ||||| ||  || |||| ||| ||| |||  ||||||| ||||| ||    
T  51899113 gtatgatactccacagatacg-caaggatgcttataagatatttcaaaaatatgtatcttatcaaagatgtagg-taaaaaacggagacaaagttgtgaa 51899016  T
Q  269 aatttagtagaaatgtatacgaatcaattttagatatgaatctgtaaaattgtttctcgatgaactacttaaaattacacttattgt 355  Q
    ||||  ||  ||||||||| || |  |||||||| ||| | |  || |||||||||||||||||| ||  |||||||||||| ||||    
T  51899015 aattcggtgaaaatgtatatgattttattttagacatgcaccgatataattgtttctcgatgaaccaccgaaaattacacttcttgt 51898929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 48 - 142
Target Start/End: Complemental strand, 17936504 - 17936410
Alignment:
Q  48 atactgcaaaatggaaacgtacccgtatcgaataccgatacttcatggatacttgcggatacgtacccacgaagtatcataattaattattttaa 142  Q
    ||||| ||||||||| |||||||||||||  ||| ||||||| |  |||||||  || ||||||||||||| ||||||  |||||||||||||||    
T  17936504 atactccaaaatggagacgtacccgtatcagatatcgatactccgcggatactctcgaatacgtacccacggagtatcggaattaattattttaa 17936410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 400 - 436
Target Start/End: Original strand, 13644144 - 13644180
Alignment:
Q  400 tataagttttagtataaattttttgttaacgtatctt 436  Q
    |||||||||||||||||||||||||||||||||||||    
T  13644144 tataagttttagtataaattttttgttaacgtatctt 13644180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 39 - 209
Target Start/End: Original strand, 40032453 - 40032628
Alignment:
Q  39 gaagtccgaatactgcaaaatggaaacgtacccgtatcgaataccgatacttcatggatacttgcggatac----gtacccacgaagtatcataattaat 134  Q
    ||||| || ||||| ||||| ||| || |||| |||||| ||||||||||| || ||||||| || |||||    ||||||||||||||||  |||| ||    
T  40032453 gaagttcggatacttcaaaacggagacatacctgtatcggataccgatactccacggatactcgcagatacatatgtacccacgaagtatcggaatttat 40032552  T
Q  135 tattttaaatttt--aatcttttttatctgatacgtatagaatattccacagatacaacaaggatacttataagata 209  Q
    |||||||| ||||  ||  | ||||||| ||||| ||||  ||| ||||||||||  |||||||||||| |||||||    
T  40032553 tattttaatttttaaaaaatattttatcagatacttatatgatactccacagata-tacaaggatacttctaagata 40032628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 102 - 142
Target Start/End: Original strand, 50727123 - 50727163
Alignment:
Q  102 gcggatacgtacccacgaagtatcataattaattattttaa 142  Q
    ||||||||||| |||||||||||||||||||||||||||||    
T  50727123 gcggatacgtatccacgaagtatcataattaattattttaa 50727163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 421 - 509
Target Start/End: Complemental strand, 51898581 - 51898494
Alignment:
Q  421 tttgttaacgtatcttagccgtatcgtatcctaaattttaaaaattttgcgtattcacgtatctgtatcgtatcgtacccgcacccgta 509  Q
    |||||||||| |||||| ||||||| ||||||||||||| |||||||  ||||| || |||   |||| ||||||||||||||||||||    
T  51898581 tttgttaacgaatcttaaccgtatcatatcctaaatttt-aaaatttcacgtatccatgtactcgtattgtatcgtacccgcacccgta 51898494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 196 - 287
Target Start/End: Original strand, 29488210 - 29488301
Alignment:
Q  196 atacttataagatatttcacaaatacgtatcctagaaatgatgaagggtaagaaagtgagacaatgttgtaaaaatttagtagaaatgtata 287  Q
    |||||||||||||| |||||  ||||||||||| ||||  ||||||||  | ||||||||||  |||||| |||||||||| || |||||||    
T  29488210 atacttataagatacttcactgatacgtatcctggaaaaaatgaagggggaaaaagtgagactttgttgtgaaaatttagtggagatgtata 29488301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 410 - 509
Target Start/End: Original strand, 29488948 - 29489047
Alignment:
Q  410 agtataaattttttgttaacgtatcttagccgtatcgtatcctaaattttaaaaattttgcgtattcacgtatctgtatcgtatcgtacccgcacccgta 509  Q
    ||||||||| |||||||||||| |  |||||||||| |||| | |||||||||||||| | ||||   ||||  ||||| ||||||||||||||| ||||    
T  29488948 agtataaatattttgttaacgtgttctagccgtatcatatcatgaattttaaaaatttagtgtatatgcgtacttgtattgtatcgtacccgcactcgta 29489047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 376 - 458
Target Start/End: Original strand, 14287365 - 14287448
Alignment:
Q  376 tattttcttcaagtgctttacatata--taagttttagtataaattttttgttaacgtatcttagccgtatcgtatcctaaattt 458  Q
    ||||||||||||||  |||||||| |  |||||||| ||||||| ||||||||||||| |||| ||| ||||||||| |||||||    
T  14287365 tattttcttcaagtattttacatacaaataagttttggtataaaatttttgttaacgtgtcttggcc-tatcgtatcttaaattt 14287448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 95 - 202
Target Start/End: Original strand, 10443401 - 10443508
Alignment:
Q  95 gatacttgcggatacgtacccacgaagtatcataattaattattttaaattt-taatcttttttatctgatacgtatagaatattccacagatacaacaa 193  Q
    |||||| |||||||||||||||| |||||||  ||||||||||||||| |||  ||  | |||||||| |||| ||||| ||||| || |||||| || |    
T  10443401 gatactcgcggatacgtacccacaaagtatcggaattaattattttaattttaaaaaatattttatctaatacttataggatatttcatagatac-acga 10443499  T
Q  194 ggatactta 202  Q
    |||||||||    
T  10443500 ggatactta 10443508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 357 - 434
Target Start/End: Complemental strand, 38682716 - 38682637
Alignment:
Q  357 atgaagggtaattagtgcttattttcttcaagtgctttacatatat--aagttttagtataaattttttgttaacgtatc 434  Q
    |||||| ||||| | || |||||||||||||||  |||||||||||  |||||||| |||| | ||||||||||||||||    
T  38682716 atgaagagtaatcaatgtttattttcttcaagtattttacatatatttaagttttattatagaatttttgttaacgtatc 38682637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 399 - 466
Target Start/End: Complemental strand, 42603286 - 42603219
Alignment:
Q  399 atataagttttagtataaattttttgttaacgtatcttagccgtatcgtatcctaaattttaaaaatt 466  Q
    |||||||||||| ||||||   ||| |||| ||||||||  |||| ||||||||||||||||||||||    
T  42603286 atataagttttattataaacaatttattaatgtatcttaatcgtagcgtatcctaaattttaaaaatt 42603219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 174 - 255
Target Start/End: Original strand, 41827628 - 41827709
Alignment:
Q  174 atattccacagatacaacaaggatacttataagatatttcacaaatacgtatcctag-aaatgatgaagggtaagaaagtgag 255  Q
    ||||||| |||||||| ||||||||||| ||||||| |||||| | |||||| |||| ||| ||||||| |||| ||||||||    
T  41827628 atattccgcagataca-caaggatacttctaagatacttcacagacacgtattctagaaaaagatgaagagtaaaaaagtgag 41827709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 400 - 437
Target Start/End: Original strand, 35160468 - 35160505
Alignment:
Q  400 tataagttttagtataaattttttgttaacgtatctta 437  Q
    ||||||||||| ||||||||||||||| ||||||||||    
T  35160468 tataagttttattataaattttttgtttacgtatctta 35160505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 36 - 76
Target Start/End: Complemental strand, 22791407 - 22791367
Alignment:
Q  36 tatgaagtccgaatactgcaaaatggaaacgtacccgtatc 76  Q
    ||||||||||| ||||| ||||||||| |||||||||||||    
T  22791407 tatgaagtccggatactccaaaatggagacgtacccgtatc 22791367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 418 - 474
Target Start/End: Complemental strand, 28658485 - 28658429
Alignment:
Q  418 ttttttgttaacgtatcttagccgtatcgtatcctaaattttaaaaattttgcgtat 474  Q
    |||||| ||||||||||| |||||||||||||| | | |||| |||||||| |||||    
T  28658485 ttttttattaacgtatctcagccgtatcgtatcttgatttttgaaaattttccgtat 28658429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 418 - 474
Target Start/End: Original strand, 38949178 - 38949234
Alignment:
Q  418 ttttttgttaacgtatcttagccgtatcgtatcctaaattttaaaaattttgcgtat 474  Q
    |||||| ||||||||||  |||||||||||||| ||| |||| |||||||| |||||    
T  38949178 ttttttattaacgtatcccagccgtatcgtatcttaatttttgaaaattttccgtat 38949234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 406 - 510
Target Start/End: Original strand, 46285771 - 46285874
Alignment:
Q  406 ttttagtataaattttttgttaacgtatcttagccgtatcgtatcctaaattttaaaaattttgcgtattcacgtatctgtatcgtatcgtacccgcacc 505  Q
    ||||| ||||||| ||||||||||||||||||  | |||||||| ||  ||||||||||| | | |||| | |||| |||||||||| |||| || || |    
T  46285771 ttttaatataaatattttgttaacgtatcttaagcatatcgtat-cttgattttaaaaatctcgtgtatccgcgtacctgtatcgtaccgtatccacatc 46285869  T
Q  506 cgtat 510  Q
    |||||    
T  46285870 cgtat 46285874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 106 - 150
Target Start/End: Original strand, 50726540 - 50726584
Alignment:
Q  106 atacgtacccacgaagtatcataattaattattttaaattttaat 150  Q
    ||||||| ||||||||||||  ||||||||||||||| |||||||    
T  50726540 atacgtatccacgaagtatcggaattaattattttaatttttaat 50726584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 93; Significance: 5e-45; HSPs: 43)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 72 - 345
Target Start/End: Original strand, 7056947 - 7057218
Alignment:
Q  72 gtatcgaataccgatacttcatggatacttgcggatacgtacccacgaagtatcataattaattattttaaattttaatc--ttttttatctgatacgta 169  Q
    |||||| |||||||||||  | ||||||| | | ||||||||||||||||||||  ||||||| ||||||| ||||||    | ||||||||||||| ||    
T  7056947 gtatcggataccgatactctacggatactcgtgaatacgtacccacgaagtatcgaaattaat-attttaatttttaaaaaatattttatctgatactta 7057045  T
Q  170 tagaatattccacagatacaacaaggatacttataagatatttcacaaatacgtatcctagaaatgatgaagggtaagaaagtgagacaatgttgtaaaa 269  Q
    ||| ||| |||| ||||||| ||||||||||||||||||  |||||| ||| ||||||||||||  ||||||||||| ||||||||||||||||||| ||    
T  7057046 taggatactccatagataca-caaggatacttataagatgcttcacatatatgtatcctagaaaa-atgaagggtaa-aaagtgagacaatgttgtagaa 7057142  T
Q  270 atttagtagaaatgtatacgaatcaattttagatatgaatctgtaaaattgtttctcgatgaactacttaaaatta 345  Q
    ||| |||||| ||||||| || |||  |||| ||||| ||| ||| |||||| ||||||||||| |||||||||||    
T  7057143 attcagtagagatgtatatgattcacatttacatatggatcagtataattgtgtctcgatgaacaacttaaaatta 7057218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 71 - 355
Target Start/End: Complemental strand, 29231358 - 29231072
Alignment:
Q  71 cgtatcgaataccgatacttcatggatacttgcggatacgtacccacgaagtatcataattaattattttaaattttaatc--ttttttatctgatacgt 168  Q
    ||||||| ||||||||||| || ||||| | || |||||||| ||| ||||||||  ||||||||||||||| |||||||   | ||||||| ||||| |    
T  29231358 cgtatcggataccgatactccacggatattcgcagatacgtatccaagaagtatcggaattaattattttaatttttaataaatattttatcggatactt 29231259  T
Q  169 atagaatattccacagatacaacaaggatacttataagatatttcacaaatacgtatcctagaaat-gatgaagggtaagaaagtgagacaatgttgtaa 267  Q
    ||   ||| |||||| ||||| |||||||| || ||||||| |||||| | ||||||||||||||  |||||||  ||| ||||||||||||||||||||    
T  29231258 atgtgatactccacatataca-caaggatatttttaagatacttcacagacacgtatcctagaaaaagatgaagactaaaaaagtgagacaatgttgtaa 29231160  T
Q  268 aaatttagtagaaatgtatacgaatcaattttagatatgaatctgtaaaattgtttctcgatgaactacttaaaattacacttattgt 355  Q
    ||||| | || | ||||||| || ||||||||||||||| |||  || |||||||||||||||||  ||||||||||| |||| ||||    
T  29231159 aaattcattatagatgtatatgactcaattttagatatgcatcaatagaattgtttctcgatgaaacacttaaaattatacttcttgt 29231072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 81; E-Value: 8e-38
Query Start/End: Original strand, 35 - 356
Target Start/End: Original strand, 3387087 - 3387409
Alignment:
Q  35 ctatgaagtccgaatactgcaaaatggaaacgtacccgtatcgaataccgatacttcatggatacttgcggatacgtacccacgaagtatcataattaat 134  Q
    |||||| | ||| ||||| ||||||||  | |||||  ||||| ||||||||||| ||  |||| | |||||||| |||||||||||||||| |||||||    
T  3387087 ctatgaggcccggatactccaaaatggtgatgtacctatatcggataccgatactccaaagatattcgcggatacatacccacgaagtatcaaaattaat 3387186  T
Q  135 tattttaaatttt--aatcttttttatctgatacgtatagaatattccacagatacaacaaggatacttataagatatttcacaaatacgtatcctagaa 232  Q
    |||||||| ||||  ||  |  ||||||  |||| ||||  ||| | ||| |||||| |||  |||||||||||||  ||| ||||||||||||||||||    
T  3387187 tattttaatttttgaaaaataatttatcaaatacatataagatacttcacggataca-caaaaatacttataagatgcttcgcaaatacgtatcctagaa 3387285  T
Q  233 atgatgaagggtaagaaagtgagacaatgttgtaaaaatttagtagaaatgtatacgaatcaattttagatatgaatctgtaaaattgtttctcgatgaa 332  Q
    | |||||||||||| ||||||||||||||||||||||||| |||||| | || ||    |||||||||  |||| |||  || ||||||||||| |||||    
T  3387286 aagatgaagggtaaaaaagtgagacaatgttgtaaaaattcagtagagacgtgtatatttcaattttatttatgcatcattagaattgtttctcaatgaa 3387385  T
Q  333 ctacttaaaattacacttattgta 356  Q
    | ||||||| ||| |||| |||||    
T  3387386 ccacttaaatttatacttcttgta 3387409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 35 - 258
Target Start/End: Complemental strand, 19100349 - 19100124
Alignment:
Q  35 ctatgaagtccgaatactgcaaaatggaaacgtacccgtatcgaataccgatacttcatggatacttgcggatacgtacccacgaagtatcataattaat 134  Q
    |||||||| | | ||||| ||||||||| |||||||||||||| |||||||||||||| ||||||| ||||||| ||||| |||||||||   |||||||    
T  19100349 ctatgaagcctggatactccaaaatggagacgtacccgtatcggataccgatacttcacggatactcgcggatatgtacctacgaagtattgaaattaat 19100250  T
Q  135 tattttaaattttaat--cttttttatctgatacgtatagaatattccacagatacaacaaggatacttataagatatttcacaaatacgtatcctag-a 231  Q
    |||||||| |||||||   | ||||||| ||||| |||   ||| |||||| |||| |||||||||||| ||||||| |||||| ||||||||||||| |    
T  19100249 tattttaatttttaataaatattttatcggatacttatgtgatactccacatatac-acaaggatacttctaagatacttcacagatacgtatcctagaa 19100151  T
Q  232 aatgatgaagggtaagaaagtgagaca 258  Q
    || ||| ||| |||| |||||||||||    
T  19100150 aaagataaagagtaaaaaagtgagaca 19100124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 190 - 350
Target Start/End: Complemental strand, 13407420 - 13407260
Alignment:
Q  190 acaaggatacttataagatatttcacaaatacgtatcctagaaatgatgaagggtaagaaagtgagacaatgttgtaaaaatttagtagaaatgtatacg 289  Q
    ||||| ||| ||||||||||  |||||||||||||||||||||| ||||||||  || ||| ||||||||||||||| ||||| ||||||||  |||| |    
T  13407420 acaagaatatttataagatacgtcacaaatacgtatcctagaaaagatgaaggagaaaaaattgagacaatgttgtagaaattcagtagaaacttatatg 13407321  T
Q  290 aatcaattttagatatgaatctgtaaaattgtttctcgatgaactacttaaaattacactt 350  Q
    | ||||||||||||||  ||| ||| |||||||||||||||||| | ||||||||| ||||    
T  13407320 attcaattttagatatacatcagtataattgtttctcgatgaaccagttaaaattatactt 13407260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 355 - 529
Target Start/End: Complemental strand, 19099849 - 19099674
Alignment:
Q  355 taatgaagggtaattagtgcttattttcttcaagtgctttacata--tataagttttagtataaattttttgttaacgtatcttagccgtatcgtatcct 452  Q
    |||||||| |||||  ||| | |||||||||||||  ||||||||  ||||||||||| ||||||||||| ||||||||||| || ||||||||||||||    
T  19099849 taatgaagagtaatcggtgttaattttcttcaagtattttacatacatataagttttactataaattttt-gttaacgtatcataaccgtatcgtatcct 19099751  T
Q  453 aaattttaaaaattttgcgtattcacgtatctgtatcgtatcgtacccgcacccgtatctgtatctgggcttcatag 529  Q
    |||||||||||| || ||||||  ||||| | |||||||||| || || |||||||||| |||||  ||||||||||    
T  19099750 aaattttaaaaaattcgcgtatctacgtacccgtatcgtatcatatccacacccgtatccgtatcaaggcttcatag 19099674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 365 - 481
Target Start/End: Complemental strand, 2627884 - 2627766
Alignment:
Q  365 taattagtgcttattttcttcaagtgctttacata--tataagttttagtataaattttttgttaacgtatcttagccgtatcgtatcctaaattttaaa 462  Q
    |||||| || |||||||||| ||||  ||||||||  |||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||    
T  2627884 taattaatgtttattttcttgaagtattttacatacatataagttttagtataaaatttttgttaacgtatcttaaccgtatcgtatcctaaattttaaa 2627785  T
Q  463 aattttgcgtattcacgta 481  Q
    || |||| |||| ||||||    
T  2627784 aaatttgtgtatccacgta 2627766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 190 - 350
Target Start/End: Complemental strand, 2628124 - 2627962
Alignment:
Q  190 acaaggatacttataagatatttcacaaatacgtatcctagaaat--gatgaagggtaagaaagtgagacaatgttgtaaaaatttagtagaaatgtata 287  Q
    |||||| ||||||||||||| |||||| ||| ||||||||||||   ||||||| |||| ||||||||||| ||||||||| ||| |||||| |||||||    
T  2628124 acaaggttacttataagatacttcacatatatgtatcctagaaaaaagatgaagagtaaaaaagtgagacagtgttgtaaacattcagtagagatgtata 2628025  T
Q  288 cgaatcaattttagatatgaatctgtaaaattgtttctcgatgaactacttaaaattacactt 350  Q
     || ||||||||||||||| ||   || |||||||| ||||||||| ||||||||||| ||||    
T  2628024 tgattcaattttagatatgcataattagaattgtttatcgatgaaccacttaaaattatactt 2627962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 190 - 341
Target Start/End: Original strand, 27925522 - 27925673
Alignment:
Q  190 acaaggatacttataagatatttcacaaatacgtatcctagaaatgatgaagggtaagaaagtgagacaatgttgtaaaaatttagtagaaatgtatacg 289  Q
    ||||||| ||||| |||||| |||||| |||||||||||||||| ||||||| |||| ||| ||||||||||||||| ||||| || ||| || | || |    
T  27925522 acaaggacacttacaagatacttcacatatacgtatcctagaaaagatgaagtgtaaaaaaatgagacaatgttgtagaaattcagcagagatatctatg 27925621  T
Q  290 aatcaattttagatatgaatctgtaaaattgtttctcgatgaactacttaaa 341  Q
    | ||||||||||||||  ||| ||| |||||||||||||||||| |||||||    
T  27925622 attcaattttagatattcatcagtagaattgtttctcgatgaaccacttaaa 27925673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 34 - 367
Target Start/End: Complemental strand, 31114314 - 31113980
Alignment:
Q  34 cctatgaagtccgaatactgcaaaatggaaacgtacccgtatcgaataccgatacttcatggatacttgcggatacgtacccacgaagtatcataattaa 133  Q
    ||||||||| ||| ||||| |||||  || || ||||||||||| |||| ||||||  | | ||||| |||||| |||| |||  |||||||| ||||||    
T  31114314 cctatgaagcccggatactccaaaactgagacatacccgtatcggatactgatactctacgcatactcgcggatgcgtatccataaagtatcagaattaa 31114215  T
Q  134 ttattttaaattttaatc--ttttttatctgatacgtatagaatattccacagatacaacaaggatacttataagatatttcacaaatacgtatcctaga 231  Q
    ||||||||| ||||||    | | ||||| ||||| |||| |||| | || | ||||| ||  ||||||||||||||| ||| || ||  ||||||||||    
T  31114214 ttattttaatttttaaaaaatatattatcagatacttatataatacttcaaaaataca-cattgatacttataagatacttcgcatatgtgtatcctaga 31114116  T
Q  232 aatga-tgaagggtaagaaagtgagacaatgttgtaaaaatttagtagaaatgtatacgaatcaattttagatatgaatctgtaaaattgtttctcgatg 330  Q
    ||  | |||||||||| ||||||||||||| ||  ||||||| || ||| ||||||| || ||||||||||||||| ||  ||||||||||||| || ||    
T  31114115 aaaaaatgaagggtaaaaaagtgagacaatatt--aaaaattaaggagagatgtatatgattcaattttagatatgcattagtaaaattgtttcacggtg 31114018  T
Q  331 aactacttaaaattacacttattgt-aatgaagggtaa 367  Q
    ||| ||||||||||| |||| ||||  |||||||||||    
T  31114017 aaccacttaaaattatacttcttgtggatgaagggtaa 31113980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 365 - 517
Target Start/End: Original strand, 8229486 - 8229640
Alignment:
Q  365 taattagtgcttattttcttcaagtgctttacata--tataagttttagtataaattttttgttaacgtatcttagccgtatcgtatcctaaattttaaa 462  Q
    |||||| || |||||||||||||||  ||||||||  ||||||||||| |||||||||||| |||||||||||||| |||||||||||||||||||||||    
T  8229486 taattaatgtttattttcttcaagtattttacatacatataagttttaatataaattttttattaacgtatcttagtcgtatcgtatcctaaattttaaa 8229585  T
Q  463 aattttgcgtattcacgtatctgtatcgtatcgtacccgcacccgtatctgtatc 517  Q
    ||  | ||||||   |||| |  ||||||||| ||| ||||| |||||| |||||    
T  8229586 aaaatcgcgtatatccgtacccatatcgtatcatactcgcactcgtatccgtatc 8229640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 198 - 345
Target Start/End: Original strand, 5836480 - 5836627
Alignment:
Q  198 acttataagatatttcacaaatacgtatcctagaaatgatgaagggtaagaaagtgagacaatgttgtaaaaatttagtagaaatgtatacgaatcaatt 297  Q
    |||||||||||| |||| | |||||||| |||||||  |||||||||   || ||||||||||||||| |||||| |||  | ||||||| || ||||||    
T  5836480 acttataagatacttcagagatacgtattctagaaaatatgaagggtgcaaaggtgagacaatgttgtgaaaattcagtgaagatgtatatgattcaatt 5836579  T
Q  298 ttagatatgaatctgtaaaattgtttctcgatgaactacttaaaatta 345  Q
    ||| ||||| ||| ||| |||||||||||||||||| |||||||||||    
T  5836580 ttatatatgtatcggtataattgtttctcgatgaaccacttaaaatta 5836627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 190 - 352
Target Start/End: Original strand, 26564917 - 26565080
Alignment:
Q  190 acaaggatacttataagatatttcacaaatacgtatcctagaaat-gatgaagggtaagaaagtgagacaatgttgtaaaaatttagtagaaatgtatac 288  Q
    |||| ||||||||||||||| |||| | |||  |||||||||||  ||||||| |||| ||||||||| ||||||||||| ||| | ||| ||||||||     
T  26564917 acaaagatacttataagatacttcaaagatatctatcctagaaaaagatgaagagtaaaaaagtgagataatgttgtaaacattcaatagcaatgtatat 26565016  T
Q  289 gaatcaattttagatatgaatctgtaaaattgtttctcgatgaactacttaaaattacacttat 352  Q
    || ||||||||||||||| |||  || |||||||||| ||| ||| ||||||||||| ||||||    
T  26565017 gattcaattttagatatgtatcactataattgtttcttgataaaccacttaaaattatacttat 26565080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 375 - 525
Target Start/End: Complemental strand, 31113776 - 31113624
Alignment:
Q  375 ttattttcttcaagtgctttacatata--taagttttagtataaattttttgttaacgtatcttagccgtatcgtatcctaaattttaaaaattttgcgt 472  Q
    |||||||||||||||  ||| |||| |  |||||||||||||||| |||||||||||||||||  | ||||||||||||||||||| ||||| || | ||    
T  31113776 ttattttcttcaagtattttccatacaaataagttttagtataaaatttttgttaacgtatctcggacgtatcgtatcctaaatttaaaaaaattcgtgt 31113677  T
Q  473 attcacgtatctgtatcgtatcgtacccgcacccgtatctgtatctgggcttc 525  Q
    || | |||| |  ||| |||||||||| |||||| |||| ||||| |||||||    
T  31113676 atccgcgtacccatattgtatcgtacctgcacccatatccgtatccgggcttc 31113624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 375 - 501
Target Start/End: Complemental strand, 34764581 - 34764452
Alignment:
Q  375 ttattttcttcaagtgctttaca----tatataagttttagtataaattttttgttaacgtatcttagccgtatcgtatcctaaattttaaaaattttgc 470  Q
    |||||||||||||||  ||||||    ||||||||||||||||||||  ||| ||||||||||||||| ||||||||||| |||||||| |||| || ||    
T  34764581 ttattttcttcaagtattttacacatatatataagttttagtataaaaattt-gttaacgtatcttagacgtatcgtatcttaaattttgaaaaattcgc 34764483  T
Q  471 gtattcacgtatctgtatcgtatcgtacccg 501  Q
    |||| |||||||| |||||||| | ||||||    
T  34764482 gtatccacgtatccgtatcgtaccttacccg 34764452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 72 - 272
Target Start/End: Original strand, 39935459 - 39935660
Alignment:
Q  72 gtatcgaataccgatacttcatggatacttgcggatacgtacccacgaagtatcataattaattattttaaatt---ttaatcttttttatctgatacgt 168  Q
    |||||| ||| ||||| | || ||||||| |||||||||||  |||||||||||||||||||||||||||| ||     ||  | ||||||| ||||| |    
T  39935459 gtatcggatatcgatattccacggatactcgcggatacgtattcacgaagtatcataattaattattttaatttaaaaaaaaatattttatcggatacat 39935558  T
Q  169 atagaatattccacagatacaacaaggatacttataagatatttcacaaatacgtatcctagaaatgatgaagggtaagaaagtgagacaatgttgtaaa 268  Q
    ||| |||| || ||| |||| |||| ||||||||||||||| || | | ||| |||| ||||||| |||||| | ||| |||||||||||||||||||||    
T  39935559 ataaaatactctacatatac-acaaagatacttataagatactt-atagatatgtatgctagaaaagatgaaagataaaaaagtgagacaatgttgtaaa 39935656  T
Q  269 aatt 272  Q
    ||||    
T  39935657 aatt 39935660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 375 - 530
Target Start/End: Complemental strand, 13407096 - 13406942
Alignment:
Q  375 ttattttcttcaagtgctttacatatataagttttagtataaattttttgttaacgtatcttagccgtatcgtatcctaaattttaaaaattttgcgtat 474  Q
    ||||||||||||| |  ||||||||||||||| ||||||||||   || ||| |||||||||||| |||| ||||||||||  ||||||| || || |||    
T  13407096 ttattttcttcaaatattttacatatataagtcttagtataaaaaattcgttgacgtatcttagctgtattgtatcctaaa-gttaaaaaattcgcatat 13406998  T
Q  475 tcacgtatctgtatcgtatcgtacccgcacccgtatctgtatctgggcttcatagg 530  Q
     |||||| | ||||| ||||||| |||||| |||| | |||||||| |||||||||    
T  13406997 ccacgtacccgtatcctatcgtatccgcactcgtacccgtatctggacttcatagg 13406942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 228 - 355
Target Start/End: Complemental strand, 32076658 - 32076531
Alignment:
Q  228 tagaaatgatgaagggtaagaaagtgagacaatgttgtaaaaatttagtagaaatgtatacgaatcaattttagatatgaatctgtaaaattgtttctcg 327  Q
    |||||| |||||||||||| |||||||||||||||||||||| || |||||| |||| ||    ||||||||||||||| |||  |||||||||||||||    
T  32076658 tagaaaagatgaagggtaaaaaagtgagacaatgttgtaaaatttcagtagagatgtgtatagttcaattttagatatgcatcattaaaattgtttctcg 32076559  T
Q  328 atgaactacttaaaattacacttattgt 355  Q
    |  ||| ||||||| ||| |||| ||||    
T  32076558 acaaaccacttaaatttatacttcttgt 32076531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 399 - 501
Target Start/End: Complemental strand, 39730641 - 39730539
Alignment:
Q  399 atataagttttagtataaattttttgttaacgtatcttagccgtatcgtatcctaaattttaaaaattttgcgtattcacgtatctgtatcgtatcgtac 498  Q
    |||||||||||| |||||| ||||||||||| |||| ||   ||||||||||||||||||||||||  |  ||||||| |||| ||||||||||||||||    
T  39730641 atataagttttattataaaatttttgttaacatatcataattgtatcgtatcctaaattttaaaaaaatcacgtattcgcgtacctgtatcgtatcgtac 39730542  T
Q  499 ccg 501  Q
    |||    
T  39730541 ccg 39730539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 190 - 350
Target Start/End: Original strand, 34510804 - 34510965
Alignment:
Q  190 acaaggatacttataagatatttcacaaatacgtatcctagaaat-gatgaagggtaagaaagtgagacaatgttgtaaaaatttagtagaaatgtatac 288  Q
    |||||||||||||||||||| |||| | ||||||||| ||||||  ||||||| |||| ||||||||| ||| ||||||| | | | |||| |||||||     
T  34510804 acaaggatacttataagatacttcagagatacgtatcgtagaaaaagatgaagagtaaaaaagtgagataatattgtaaacactcaatagagatgtatat 34510903  T
Q  289 gaatcaattttagatatgaatctgtaaaattgtttctcgatgaactacttaaaattacactt 350  Q
    || | || |||||||||| ||   ||| ||||||| ||||||||| ||||||||||| ||||    
T  34510904 gatttaaatttagatatgcataactaacattgtttttcgatgaaccacttaaaattatactt 34510965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 200 - 300
Target Start/End: Complemental strand, 31211010 - 31210910
Alignment:
Q  200 ttataagatatttcacaaatacgtatcctagaaatgatgaagggtaagaaagtgagacaatgttgtaaaaatttagtagaaatgtatacgaatcaatttt 299  Q
    |||||||||| |||||| ||| ||||| ||||||  ||||||||||| ||| ||||||| ||||||||||||| |||||||||||||| || | ||||||    
T  31211010 ttataagatacttcacagatatgtatcttagaaaatatgaagggtaaaaaaatgagacagtgttgtaaaaattcagtagaaatgtatatgatttaatttt 31210911  T
Q  300 a 300  Q
    |    
T  31210910 a 31210910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 359 - 458
Target Start/End: Original strand, 7057333 - 7057435
Alignment:
Q  359 gaagggtaattagtgcttattttcttcaa-gtgctttacata--tataagttttagtataaattttttgttaacgtatcttagccgtatcgtatcctaaa 455  Q
    |||| ||||| | |||||||||||||||| ||  ||||||||  ||||| |||||||||||| |||||| |||||||||||| |||||||||||||||||    
T  7057333 gaagagtaatcaatgcttattttcttcaaagtattttacatacatataaattttagtataaaatttttgctaacgtatcttaaccgtatcgtatcctaaa 7057432  T
Q  456 ttt 458  Q
    |||    
T  7057433 ttt 7057435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 35 - 217
Target Start/End: Complemental strand, 34764905 - 34764723
Alignment:
Q  35 ctatgaagtccgaatactgcaaaatggaaacgtacccgtatcgaataccgatacttcatggatacttgcggatacgtacccacgaagtatcataattaat 134  Q
    |||||||| ||| ||||| |||||  || ||||||||||||||  |||| ||||| || ||||||| ||||||||| ||||||||||||||| |||||||    
T  34764905 ctatgaagcccggatact-caaaacagagacgtacccgtatcggctaccaatactccacggatactcgcggatacgcacccacgaagtatcagaattaat 34764807  T
Q  135 tattttaaatttt---aatcttttttatctgatacgtatagaatattccacagatacaacaaggatacttataagatatttcacaa 217  Q
    || ||||||||||   ||  | |||||||  |||| ||||  ||| |||||| |||| ||||||||||||||||| || |||||||    
T  34764806 ta-tttaaattttaaaaaaatattttatcgaatacttatatgatactccacaaatac-acaaggatacttataaggtacttcacaa 34764723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 399 - 529
Target Start/End: Original strand, 39935983 - 39936114
Alignment:
Q  399 atataagttttagtataaattttttgttaacgtatcttagccgtatcgtatcctaaattttaaaaattttg-cgtattcacgtatctgtatcgtatcgta 497  Q
    |||| ||||||||||||||   ||||| ||||||||||||| ||||||||||||||||||||||||  ||  ||||| | ||||   ||||| |||||||    
T  39935983 atatgagttttagtataaaaagtttgtcaacgtatcttagctgtatcgtatcctaaattttaaaaaaattcacgtatccgcgtactcgtatcatatcgta 39936082  T
Q  498 cccgcacccgtatctgtatctgggcttcatag 529  Q
    |||||||||||||  ||| | |||||||||||    
T  39936083 cccgcacccgtattcgtacccgggcttcatag 39936114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 195 - 345
Target Start/End: Complemental strand, 16756231 - 16756081
Alignment:
Q  195 gatacttataagatatttcacaaatacgtatcctagaaatgatgaagggtaagaaagtgagacaatgttgtaaaaatttagtagaaatgtatacgaatca 294  Q
    |||||||||||||||||| ||  ||| ||||||||||||  |||||||  || |||||||||||||||||  ||| || |   || ||||||| || |||    
T  16756231 gatacttataagatattttacgtatatgtatcctagaaaatatgaaggacaaaaaagtgagacaatgttgcgaaagttcaacggagatgtatatgattca 16756132  T
Q  295 attttagatatgaatctgtaaaattgtttctcgatgaactacttaaaatta 345  Q
    |||||||||||| ||  |||||||||||| |||||  || |||||||||||    
T  16756131 attttagatatgcattagtaaaattgtttatcgattgaccacttaaaatta 16756081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 402 - 504
Target Start/End: Original strand, 26565191 - 26565293
Alignment:
Q  402 taagttttagtataaattttttgttaacgtatcttagccgtatcgtatcctaaattttaaaaattttgcgtattcacgtatctgtatcgtatcgtacccg 501  Q
    ||||||||||||| || ||||||||||||||||||| | ||||||||||||||||||| |||| || | |||| |  ||||| |||| ||||| ||||||    
T  26565191 taagttttagtattaaatttttgttaacgtatcttaactgtatcgtatcctaaatttttaaaaattcgtgtatccgtgtatccgtattgtatcttacccg 26565290  T
Q  502 cac 504  Q
    |||    
T  26565291 cac 26565293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 201 - 355
Target Start/End: Original strand, 41368580 - 41368733
Alignment:
Q  201 tataagatatttcacaaatacgtatcctagaaatgatgaagggtaagaaagtgagacaatgttgtaaaaatttagtagaaatgtatacgaatcaatttta 300  Q
    ||||| |||||| |||||||| ||||||||||| |||||| ||||| ||||||||||||| |||| |||||| ||  ||||||||    | |||||||||    
T  41368580 tataaaatattttacaaatacatatcctagaaaagatgaaaggtaaaaaagtgagacaatcttgtgaaaattcag-cgaaatgtacgttattcaatttta 41368678  T
Q  301 gatatgaatctgtaaaattgtttctcgatgaactacttaaaattacacttattgt 355  Q
    |||||| ||| ||  || ||||||| ||||||| ||| ||||||| |||| ||||    
T  41368679 gatatgcatcggtgtaaatgtttcttgatgaaccactaaaaattatactttttgt 41368733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 399 - 489
Target Start/End: Original strand, 39329756 - 39329845
Alignment:
Q  399 atataagttttagtataaattttttgttaacgtatcttagccgtatcgtatcctaaattttaaaaattttgcgtattcacgtatctgtatc 489  Q
    |||||||||||||||||||  | |||||||||||| |||||||||||||||| |||| |||| |||||||| |||| | | ||||||||||    
T  39329756 atataagttttagtataaaaatcttgttaacgtattttagccgtatcgtatcttaaa-tttataaattttgtgtatccgcatatctgtatc 39329845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 399 - 464
Target Start/End: Complemental strand, 16755826 - 16755761
Alignment:
Q  399 atataagttttagtataaattttttgttaacgtatcttagccgtatcgtatcctaaattttaaaaa 464  Q
    |||||| ||||||||||||||||||||||||||||||||   ||||||||||  ||||||||||||    
T  16755826 atataaattttagtataaattttttgttaacgtatcttaattgtatcgtatctcaaattttaaaaa 16755761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 399 - 528
Target Start/End: Complemental strand, 32076286 - 32076157
Alignment:
Q  399 atataagttttagtataaattttttgttaacgtatcttagccgtatcgtatcctaaattttaaaaattttgcgtattcacgtatctgtatcgtatcgtac 498  Q
    |||| ||||||||||||| |||||| | |||||||||||| |||||| |||||||||||| ||||| |    |||| |   |||  |||||||||| |||    
T  32076286 atatgagttttagtataatttttttttcaacgtatcttagtcgtatcatatcctaaatttaaaaaaatacatgtatccgtatattcgtatcgtatcatac 32076187  T
Q  499 ccgcacccgtatctgtatctgggcttcata 528  Q
    ||||| |||||||| |||| ||||||||||    
T  32076186 ccgcatccgtatctatatccgggcttcata 32076157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 355 - 467
Target Start/End: Original strand, 36906955 - 36907067
Alignment:
Q  355 taatgaagggtaattagtgcttattttcttcaagtgctttacat--atataagttttagtataaattttttgttaacgtatcttagccgtatcgtatcct 452  Q
    |||||||| ||||||  | |||||||||||||||   |||||||  |||||| ||||||||||||   ||||||||||||||||||||||||  | ||||    
T  36906955 taatgaagagtaattgatccttattttcttcaagaattttacatgcatataaattttagtataaaaaatttgttaacgtatcttagccgtat--tgtcct 36907052  T
Q  453 aaattttaaaaattt 467  Q
    ||||||| |||||||    
T  36907053 aaatttttaaaattt 36907067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 355 - 466
Target Start/End: Original strand, 27925799 - 27925912
Alignment:
Q  355 taatgaagggtaattagtgcttattttcttcaagtgctttacata--tataagttttagtataaattttttgttaacgtatcttagccgtatcgtatcct 452  Q
    |||||||||||| | | |||||||||| |||||||  ||||||||  ||||||||||| | ||||   ||||||||||||||||||| || |||||| ||    
T  27925799 taatgaagggtagtcaatgcttatttttttcaagtattttacatacatataagttttattgtaaaaaatttgttaacgtatcttagcagtgtcgtattct 27925898  T
Q  453 aaattttaaaaatt 466  Q
     ||||| |||||||    
T  27925899 caatttaaaaaatt 27925912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 399 - 467
Target Start/End: Original strand, 7732574 - 7732641
Alignment:
Q  399 atataagttttagtataaattttttgttaacgtatcttagccgtatcgtatcctaaattttaaaaattt 467  Q
    |||||| ||||||||||||| |||| ||||| ||| ||| |||||||||||||| ||||||||||||||    
T  7732574 atataaattttagtataaatatttt-ttaacatatattaaccgtatcgtatcctgaattttaaaaattt 7732641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 355 - 452
Target Start/End: Complemental strand, 8802611 - 8802512
Alignment:
Q  355 taatgaagggtaattagtgcttattttcttcaagtgctttacat--atataagttttagtataaattttttgttaacgtatcttagccgtatcgtatcct 452  Q
    |||||||| ||||| | |||||||||| || || |  |||||||  |||||||||||||||||| |||||||||||||||| |||   ||||||||||||    
T  8802611 taatgaagagtaataaatgcttattttttttaaatattttacatgtatataagttttagtataatttttttgttaacgtattttatttgtatcgtatcct 8802512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 445 - 529
Target Start/End: Complemental strand, 29230804 - 29230720
Alignment:
Q  445 cgtatcctaaattttaaaaattttgcgtattcacgtatctgtatcgtatcgtacccgcacccgtatctgtatctgggcttcatag 529  Q
    |||||||||||||| ||||| || |||||| | |||| | |||| ||||| ||||||||||| ||| |||| | |||||||||||    
T  29230804 cgtatcctaaatttaaaaaaattcgcgtatccgcgtacccgtattgtatcatacccgcacccatatttgtaacggggcttcatag 29230720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 252 - 343
Target Start/End: Original strand, 8229316 - 8229407
Alignment:
Q  252 tgagacaatgttgtaaaaatttagtagaaatgtatacgaatcaattttagatatgaatctgtaaaattgtttctcgatgaactacttaaaat 343  Q
    ||||||||||||||||| ||| | |||| ||||||| || | | ||||||||||| |||  || ||||||||||| |||||  |||||||||    
T  8229316 tgagacaatgttgtaaacattcaatagagatgtatatgatttagttttagatatgcatcactagaattgtttctcaatgaatcacttaaaat 8229407  T

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Target: chr5; HSP #37
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 412 - 474
Target Start/End: Complemental strand, 18001587 - 18001525
Alignment:
Q  412 tataaattttttgttaacgtatcttagccgtatcgtatcctaaattttaaaaattttgcgtat 474  Q
    ||||| |||||| |||||||||| ||||||||||||||| | | ||||||||| ||| |||||    
T  18001587 tataatttttttattaacgtatcctagccgtatcgtatcttgatttttaaaaaatttccgtat 18001525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 355 - 434
Target Start/End: Complemental strand, 29230879 - 29230799
Alignment:
Q  355 taatgaagggtaattagtgcttattttcttcaagtgctttacata--tataagttttagtataaattttttgttaacgtatc 434  Q
    |||||||| ||||| | || | |||||||||||||  ||||||||  ||||||||||| ||||||| |||||||||||||||    
T  29230879 taatgaagagtaatcaatgttaattttcttcaagtattttacatacatataagttttattataaat-ttttgttaacgtatc 29230799  T

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Target: chr5; HSP #39
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 416 - 474
Target Start/End: Original strand, 42455124 - 42455182
Alignment:
Q  416 aattttttgttaacgtatcttagccgtatcgtatcctaaattttaaaaattttgcgtat 474  Q
    |||||||| |||| |||||| ||||| |||||||| |||||||||||| |||| |||||    
T  42455124 aattttttattaaagtatctcagccgcatcgtatcttaaattttaaaatttttccgtat 42455182  T

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Target: chr5; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 418 - 483
Target Start/End: Complemental strand, 26794076 - 26794011
Alignment:
Q  418 ttttttgttaacgtatcttagccgtatcgtatcctaaattttaaaaattttgcgtattcacgtatc 483  Q
    |||||| ||||||||||  |||||||||||||| | | |||||||| |||| |||||| |||||||    
T  26794076 ttttttattaacgtatcccagccgtatcgtatcttgatttttaaaatttttccgtattgacgtatc 26794011  T

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Target: chr5; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 405 - 458
Target Start/End: Complemental strand, 31210603 - 31210550
Alignment:
Q  405 gttttagtataaattttttgttaacgtatcttagccgtatcgtatcctaaattt 458  Q
    |||||| ||||||||||||||||| |||||| ||   |||||||||||||||||    
T  31210603 gttttactataaattttttgttaatgtatctaagatatatcgtatcctaaattt 31210550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 79 - 136
Target Start/End: Complemental strand, 32076714 - 32076657
Alignment:
Q  79 ataccgatacttcatggatacttgcggatacgtacccacgaagtatcataattaatta 136  Q
    |||||||||||| | ||||| | |||||||||||||||| || ||||| |||||||||    
T  32076714 ataccgatactttaaggatattcgcggatacgtacccacaaaatatcagaattaatta 32076657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 94 - 310
Target Start/End: Original strand, 42990547 - 42990766
Alignment:
Q  94 ggatacttgcggatacgtacccacgaagtatcataattaattattttaaatttta--atcttttttatctgatacgtatagaatattccacagatacaac 191  Q
    |||||||| |||||||||| ||| |||| |||| ||||||||||||||| ||  |  || | ||||||  ||||| ||||  ||| || |||||||| ||    
T  42990547 ggatactttcggatacgtatccatgaagaatcagaattaattattttaatttaaaatatatattttattggatacttataagatactcgacagatac-ac 42990645  T
Q  192 aaggatacttataagatatttcacaaatacgtatcctaga-aatgatgaagggt-aagaaagtgagacaatgttgtaaaaatttagtagaaatgtatacg 289  Q
    |  ||||||||||||||| || ||| | ||||||||| || ||  |||||| || || ||| ||||||  |||||| |||||| | | || ||||||| |    
T  42990646 acagatacttataagatactttacagagacgtatcctggacaaaaatgaagtgtaaaaaaaatgagactgtgttgtgaaaattcaatggagatgtatatg 42990745  T
Q  290 aatcaattttagatatgaatc 310  Q
    | ||||||| |||||||||||    
T  42990746 attcaatttaagatatgaatc 42990766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0495 (Bit Score: 54; Significance: 1e-21; HSPs: 2)
Name: scaffold0495
Description:

Target: scaffold0495; HSP #1
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 35 - 355
Target Start/End: Original strand, 5969 - 6288
Alignment:
Q  35 ctatgaagtccgaatactgcaaaatggaaacgtacccgtatcgaataccgatacttcatggatacttgcggatacgtacccacgaagtatcataattaat 134  Q
    |||||||||| | ||||| ||||| ||| |||||||||||||  ||||||||||| || | ||| | ||||||||| ||||||||||||||| |||||||    
T  5969 ctatgaagtctggatacttcaaaacggagacgtacccgtatcagataccgatactccacgtatattcgcggatacgcacccacgaagtatcagaattaat 6068  T
Q  135 tattttaaattt--taatcttttttatctgatacgtatagaatattccacagatacaacaaggatacttataagatatttcacaaatacgtatcc-taga 231  Q
    ||  ||||||||   ||  | |||||   ||||| ||||  ||  ||  | ||||| ||||| | |||||| |||||||||||| |||||||||| |  |    
T  6069 ta--ttaaatttaaaaaaatattttaatggatacttatacgattctctgcggatac-acaagaacacttat-agatatttcacatatacgtatccttcaa 6164  T
Q  232 aatgatgaagggtaagaaagtgagacaatgttgtaaaaatttagtagaaatgtatacgaatcaattttagatatgaatctgtaaaattgtttctcgatga 331  Q
    || ||||||| |||| ||||||||||||||||| ||| |||   |||| ||||||| || |||||| |||||||| ||   || |||||||| | |||||    
T  6165 aaagatgaagagtaaaaaagtgagacaatgttgcaaacattcgatagagatgtatatgattcaattatagatatgcataactagaattgttttttgatga 6264  T
Q  332 actacttaaaattacacttattgt 355  Q
    || ||||||||||| |||| ||||    
T  6265 accacttaaaattatacttcttgt 6288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0495; HSP #2
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 375 - 466
Target Start/End: Original strand, 6367 - 6459
Alignment:
Q  375 ttattttcttcaagtgctttacata--tataagttttagtataaattttttgttaacgtatcttagccgtatcgtatcctaaattttaaaaatt 466  Q
    ||||||| |||||||  ||||||||  |||| ||||||||||||||||||  ||||||||||||||  ||||||||||||||||||| ||||||    
T  6367 ttattttgttcaagtattttacatacatatatgttttagtataaattttta-ttaacgtatcttagttgtatcgtatcctaaattttgaaaatt 6459  T

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Target: scaffold0015 (Bit Score: 51; Significance: 6e-20; HSPs: 2)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 355 - 474
Target Start/End: Complemental strand, 38370 - 38249
Alignment:
Q  355 taatgaagggtaattagtgcttattttcttcaagtgctttacata--tataagttttagtataaattttttgttaacgtatcttagccgtatcgtatcct 452  Q
    |||||||||||||| | || |||||||||||||||  ||||||||  ||||||||||| ||||||   ||||||||||||||||||||||||  ||||||    
T  38370 taatgaagggtaatcaatgtttattttcttcaagtattttacatacatataagttttaatataaaaaatttgttaacgtatcttagccgtattttatcct 38271  T
Q  453 aaattttaaaaattttgcgtat 474  Q
     ||||| ||||| || ||||||    
T  38270 taatttaaaaaaattcgcgtat 38249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015; HSP #2
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 107 - 149
Target Start/End: Complemental strand, 38523 - 38481
Alignment:
Q  107 tacgtacccacgaagtatcataattaattattttaaattttaa 149  Q
    |||||||||||||||||||  ||||||||||||||| ||||||    
T  38523 tacgtacccacgaagtatcgaaattaattattttaatttttaa 38481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027 (Bit Score: 46; Significance: 6e-17; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 399 - 504
Target Start/End: Original strand, 8997 - 9102
Alignment:
Q  399 atataagttttagtataaattttttgttaacgtatcttagccgtatcgtatcctaaattttaaaaattttgcgtattcacgtatctgtatcgtatcgtac 498  Q
    |||||||||||| ||||||  ||||||||| |||| ||| || |||||||||||||||||||||||||| || ||||  ||||||| |||| ||| |||     
T  8997 atataagttttaatataaaaattttgttaatgtatattaaccttatcgtatcctaaattttaaaaatttcgcatatttgcgtatctatatcttatagtat 9096  T
Q  499 ccgcac 504  Q
    ||||||    
T  9097 ccgcac 9102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0051 (Bit Score: 39; Significance: 0.0000000000009; HSPs: 2)
Name: scaffold0051
Description:

Target: scaffold0051; HSP #1
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 399 - 481
Target Start/End: Original strand, 53892 - 53973
Alignment:
Q  399 atataagttttagtataaattttttgttaacgtatcttagccgtatcgtatcctaaattttaaaaattttgcgtattcacgta 481  Q
    |||||| |||||||||||||  |||||| || ||||||| |||||||||||||| ||||| ||||| ||||||||||| ||||    
T  53892 atataaattttagtataaataatttgttgacatatcttaaccgtatcgtatcct-aatttaaaaaaatttgcgtattcgcgta 53973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0051; HSP #2
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 71 - 135
Target Start/End: Original strand, 53652 - 53716
Alignment:
Q  71 cgtatcgaataccgatacttcatggatacttgcggatacgtacccacgaagtatcataattaatt 135  Q
    |||||||||| | |||||| |  |||||||  ||||||||||||||| |||||||| ||||||||    
T  53652 cgtatcgaattctgatactccgcggatactctcggatacgtacccacaaagtatcagaattaatt 53716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0464 (Bit Score: 38; Significance: 0.000000000004; HSPs: 1)
Name: scaffold0464
Description:

Target: scaffold0464; HSP #1
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 403 - 509
Target Start/End: Complemental strand, 5917 - 5813
Alignment:
Q  403 aagttttagtataaattttttgttaacgtatcttagccgtatcgtatcctaa-attttaaaaattttgcgtattcacgtatctgtatcgtatcgtacccg 501  Q
    ||||||||||||||| ||||||||| | |||||||||| |||||||| |||| |||||| ||   ||| |||| |||||| | ||||| |||||||||||    
T  5917 aagttttagtataaaatttttgttaccatatcttagccatatcgtattctaagattttagaa---ttgtgtatccacgtacccgtatcatatcgtacccg 5821  T
Q  502 cacccgta 509  Q
    ||| ||||    
T  5820 cactcgta 5813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0581 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0581
Description:

Target: scaffold0581; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 205 - 265
Target Start/End: Original strand, 10046 - 10106
Alignment:
Q  205 agatatttcacaaatacgtatcctagaaatgatgaagggtaagaaagtgagacaatgttgt 265  Q
    ||||| |||||| || |||||||||||||  || |||||||| ||||||||||||||||||    
T  10046 agatacttcacagatgcgtatcctagaaaatataaagggtaaaaaagtgagacaatgttgt 10106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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