View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF5924-Insertion-4 (Length: 645)

Name: NF5924-Insertion-4
Description: NF5924
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF5924-Insertion-4
NF5924-Insertion-4
[»] chr2 (74 HSPs)
chr2 (8-645)||(3423656-3424296)
chr2 (378-466)||(15866733-15866821)
chr2 (377-469)||(11513817-11513906)
chr2 (377-455)||(44606164-44606242)
chr2 (383-464)||(9478221-9478302)
chr2 (385-458)||(35459834-35459907)
chr2 (394-466)||(2416246-2416318)
chr2 (379-458)||(17952774-17952853)
chr2 (394-469)||(25609729-25609804)
chr2 (385-463)||(3102617-3102695)
chr2 (382-468)||(6926505-6926590)
chr2 (394-468)||(10143105-10143179)
chr2 (383-469)||(28803568-28803654)
chr2 (394-443)||(5045245-5045294)
chr2 (400-469)||(13630343-13630412)
chr2 (377-466)||(29430672-29430760)
chr2 (377-458)||(42817449-42817530)
chr2 (402-458)||(3458598-3458654)
chr2 (388-468)||(3673734-3673814)
chr2 (377-441)||(15173442-15173506)
chr2 (385-465)||(18962104-18962184)
chr2 (425-469)||(31740021-31740065)
chr2 (402-469)||(23143040-23143107)
chr2 (402-469)||(23554830-23554897)
chr2 (386-449)||(31461363-31461426)
chr2 (378-469)||(32694130-32694220)
chr2 (400-458)||(16946981-16947039)
chr2 (400-458)||(17017646-17017704)
chr2 (400-458)||(34339845-34339903)
chr2 (398-468)||(39929804-39929874)
chr2 (403-469)||(43199356-43199422)
chr2 (377-458)||(43808492-43808573)
chr2 (394-451)||(4026750-4026807)
chr2 (378-455)||(10150672-10150749)
chr2 (380-456)||(35809852-35809927)
chr2 (428-464)||(43173189-43173225)
chr2 (381-441)||(43431534-43431594)
chr2 (405-456)||(1939407-1939458)
chr2 (394-465)||(11344350-11344421)
chr2 (394-469)||(35755564-35755639)
chr2 (377-444)||(38239638-38239705)
chr2 (402-457)||(40837502-40837557)
chr2 (377-463)||(6547826-6547912)
chr2 (423-469)||(6993786-6993832)
chr2 (394-452)||(7825185-7825243)
chr2 (424-458)||(10646362-10646396)
chr2 (384-458)||(11863723-11863797)
chr2 (385-463)||(14209201-14209279)
chr2 (377-443)||(33197327-33197393)
chr2 (423-469)||(33942112-33942158)
chr2 (378-468)||(37053511-37053601)
chr2 (423-469)||(37292409-37292455)
chr2 (383-469)||(37766720-37766806)
chr2 (385-455)||(40672872-40672942)
chr2 (429-466)||(1160809-1160846)
chr2 (394-451)||(3611159-3611216)
chr2 (384-469)||(4550700-4550785)
chr2 (423-452)||(6988077-6988106)
chr2 (394-455)||(7282951-7283012)
chr2 (388-441)||(13864577-13864630)
chr2 (394-455)||(15171183-15171244)
chr2 (401-466)||(28039397-28039462)
chr2 (377-453)||(29503161-29503235)
chr2 (424-465)||(33944568-33944609)
chr2 (385-446)||(35252207-35252268)
chr2 (400-469)||(39983282-39983350)
chr2 (406-451)||(41407246-41407291)
chr2 (425-469)||(5043622-5043666)
chr2 (406-478)||(14666493-14666565)
chr2 (406-466)||(22681250-22681310)
chr2 (400-452)||(23747243-23747295)
chr2 (402-454)||(28933765-28933817)
chr2 (400-440)||(44119723-44119763)
chr2 (386-454)||(44458415-44458483)
[»] chr4 (67 HSPs)
chr4 (26-645)||(11917130-11917739)
chr4 (100-274)||(35742948-35743122)
chr4 (381-469)||(49219059-49219147)
chr4 (389-469)||(4071811-4071890)
chr4 (378-453)||(28581988-28582062)
chr4 (394-469)||(42321941-42322016)
chr4 (379-465)||(30024618-30024704)
chr4 (378-463)||(19422335-19422420)
chr4 (377-444)||(55599082-55599149)
chr4 (386-478)||(8422892-8422982)
chr4 (377-469)||(24193501-24193593)
chr4 (394-465)||(8130107-8130178)
chr4 (426-469)||(13949906-13949949)
chr4 (377-467)||(26883910-26884001)
chr4 (378-469)||(30207633-30207723)
chr4 (380-455)||(35743223-35743298)
chr4 (398-465)||(44119228-44119295)
chr4 (407-458)||(52735068-52735119)
chr4 (378-472)||(3549590-3549683)
chr4 (385-471)||(41606110-41606196)
chr4 (394-444)||(51044546-51044596)
chr4 (384-466)||(54325102-54325184)
chr4 (379-455)||(4191657-4191734)
chr4 (412-469)||(10192235-10192292)
chr4 (381-458)||(22684589-22684666)
chr4 (405-466)||(27623579-27623640)
chr4 (385-458)||(36734817-36734890)
chr4 (397-458)||(40865746-40865806)
chr4 (388-453)||(47970245-47970310)
chr4 (385-442)||(51555956-51556013)
chr4 (377-452)||(485997-486073)
chr4 (377-445)||(3249800-3249868)
chr4 (377-469)||(24443954-24444046)
chr4 (386-469)||(32920462-32920543)
chr4 (377-465)||(45128376-45128464)
chr4 (388-455)||(7022595-7022662)
chr4 (423-478)||(18630642-18630697)
chr4 (385-416)||(23819014-23819045)
chr4 (382-469)||(24160557-24160644)
chr4 (423-458)||(32724081-32724116)
chr4 (420-463)||(44007940-44007983)
chr4 (423-466)||(46859892-46859935)
chr4 (400-466)||(6364088-6364154)
chr4 (383-440)||(15511425-15511483)
chr4 (378-443)||(15969820-15969886)
chr4 (399-465)||(19040181-19040247)
chr4 (378-416)||(27321946-27321984)
chr4 (394-468)||(46013363-46013437)
chr4 (394-468)||(46247151-46247225)
chr4 (423-469)||(47119027-47119073)
chr4 (430-468)||(53192416-53192454)
chr4 (377-458)||(54414865-54414949)
chr4 (429-463)||(55437354-55437388)
chr4 (432-465)||(24091434-24091467)
chr4 (400-469)||(24160929-24160998)
chr4 (384-469)||(24929416-24929501)
chr4 (424-469)||(25434522-25434567)
chr4 (401-458)||(49803151-49803208)
chr4 (400-469)||(50745939-50746008)
chr4 (404-466)||(53626717-53626781)
chr4 (423-463)||(20936070-20936110)
chr4 (400-444)||(21193937-21193981)
chr4 (430-466)||(21952930-21952966)
chr4 (396-444)||(27968072-27968120)
chr4 (410-458)||(29194476-29194524)
chr4 (389-465)||(43372035-43372111)
chr4 (413-469)||(55870403-55870459)
[»] chr8 (49 HSPs)
chr8 (385-457)||(41620365-41620437)
chr8 (345-458)||(2699192-2699303)
chr8 (380-469)||(38561645-38561734)
chr8 (394-466)||(4558731-4558803)
chr8 (377-465)||(31884510-31884598)
chr8 (385-458)||(38874570-38874643)
chr8 (383-444)||(40728505-40728566)
chr8 (402-466)||(1470921-1470985)
chr8 (383-463)||(11494075-11494155)
chr8 (383-451)||(14482124-14482192)
chr8 (377-465)||(34788493-34788581)
chr8 (383-455)||(40357821-40357893)
chr8 (383-458)||(29056064-29056139)
chr8 (380-455)||(40280281-40280356)
chr8 (404-466)||(26820142-26820204)
chr8 (423-469)||(34770854-34770900)
chr8 (385-446)||(2364558-2364619)
chr8 (385-458)||(7026655-7026728)
chr8 (385-469)||(35298539-35298624)
chr8 (377-458)||(41336718-41336799)
chr8 (400-469)||(42597340-42597409)
chr8 (377-469)||(11056729-11056821)
chr8 (400-456)||(12224974-12225030)
chr8 (426-458)||(29262947-29262979)
chr8 (377-469)||(35869753-35869845)
chr8 (423-458)||(2100767-2100802)
chr8 (385-444)||(29699178-29699237)
chr8 (394-469)||(29973014-29973089)
chr8 (377-444)||(39392748-39392815)
chr8 (414-465)||(42237488-42237539)
chr8 (423-469)||(3537093-3537139)
chr8 (394-468)||(3945207-3945281)
chr8 (400-466)||(12361131-12361197)
chr8 (385-455)||(14949812-14949882)
chr8 (400-458)||(26215435-26215493)
chr8 (424-458)||(27728094-27728128)
chr8 (385-451)||(31315533-31315598)
chr8 (385-455)||(34563174-34563244)
chr8 (393-466)||(1112785-1112858)
chr8 (377-466)||(28769404-28769493)
chr8 (402-466)||(31705025-31705090)
chr8 (385-466)||(33209285-33209366)
chr8 (385-465)||(787172-787252)
chr8 (378-458)||(4510945-4511025)
chr8 (430-466)||(7878551-7878587)
chr8 (396-440)||(10062218-10062262)
chr8 (379-439)||(10939325-10939385)
chr8 (428-472)||(11376670-11376714)
chr8 (425-465)||(35374439-35374479)
[»] chr5 (55 HSPs)
chr5 (377-468)||(35135725-35135816)
chr5 (377-458)||(4991016-4991097)
chr5 (384-469)||(36539669-36539754)
chr5 (387-455)||(7096203-7096271)
chr5 (377-469)||(9927501-9927593)
chr5 (384-466)||(32059654-32059735)
chr5 (378-443)||(5284762-5284827)
chr5 (378-463)||(29116998-29117083)
chr5 (377-466)||(32172569-32172658)
chr5 (400-457)||(38047929-38047986)
chr5 (378-469)||(912710-912802)
chr5 (394-458)||(9202821-9202885)
chr5 (378-478)||(42181145-42181245)
chr5 (395-472)||(34117595-34117669)
chr5 (383-458)||(37063147-37063222)
chr5 (378-440)||(12407752-12407813)
chr5 (387-469)||(18704098-18704179)
chr5 (377-443)||(20982223-20982289)
chr5 (376-454)||(38766920-38766998)
chr5 (385-458)||(6733966-6734038)
chr5 (377-438)||(26516214-26516275)
chr5 (401-466)||(36796771-36796836)
chr5 (377-469)||(39823183-39823276)
chr5 (394-466)||(10907312-10907384)
chr5 (377-452)||(11835192-11835268)
chr5 (423-463)||(32969185-32969225)
chr5 (378-446)||(35095868-35095936)
chr5 (385-469)||(35960338-35960421)
chr5 (397-444)||(1636844-1636891)
chr5 (377-444)||(6739788-6739855)
chr5 (423-458)||(8158374-8158409)
chr5 (406-469)||(9703302-9703365)
chr5 (423-462)||(10303763-10303802)
chr5 (423-466)||(14295468-14295511)
chr5 (385-452)||(17756808-17756875)
chr5 (423-466)||(35550911-35550953)
chr5 (423-458)||(39750105-39750140)
chr5 (426-468)||(583836-583878)
chr5 (424-469)||(3952061-3952104)
chr5 (383-433)||(38033890-38033940)
chr5 (394-452)||(40048359-40048417)
chr5 (400-469)||(4855637-4855706)
chr5 (424-469)||(10272493-10272538)
chr5 (384-437)||(10391276-10391329)
chr5 (405-446)||(11615452-11615493)
chr5 (385-438)||(13224353-13224406)
chr5 (394-451)||(14932223-14932280)
chr5 (428-469)||(34205206-34205247)
chr5 (400-465)||(39128578-39128643)
chr5 (423-463)||(12595808-12595848)
chr5 (394-438)||(17498668-17498712)
chr5 (385-469)||(19177403-19177487)
chr5 (394-446)||(21782654-21782706)
chr5 (386-458)||(28586839-28586911)
chr5 (377-458)||(40534110-40534193)
[»] chr3 (69 HSPs)
chr3 (386-469)||(37788786-37788868)
chr3 (384-457)||(38462204-38462277)
chr3 (401-463)||(1395611-1395673)
chr3 (385-455)||(16790432-16790502)
chr3 (403-469)||(29771751-29771817)
chr3 (384-458)||(33307653-33307727)
chr3 (379-463)||(36783402-36783488)
chr3 (385-467)||(43116492-43116574)
chr3 (378-455)||(3182438-3182515)
chr3 (378-458)||(20349549-20349629)
chr3 (383-455)||(44374720-44374792)
chr3 (384-452)||(49772747-49772815)
chr3 (402-469)||(48397587-48397654)
chr3 (379-469)||(22214743-22214833)
chr3 (379-469)||(28779274-28779364)
chr3 (423-469)||(32555043-32555089)
chr3 (394-455)||(3757981-3758042)
chr3 (397-458)||(4990630-4990691)
chr3 (394-466)||(20192671-20192743)
chr3 (385-465)||(32703062-32703142)
chr3 (406-465)||(37689450-37689509)
chr3 (384-451)||(39971242-39971309)
chr3 (403-469)||(24235745-24235811)
chr3 (394-444)||(24605103-24605153)
chr3 (400-454)||(48364956-48365010)
chr3 (377-438)||(16790181-16790242)
chr3 (377-458)||(22232742-22232823)
chr3 (377-457)||(24268228-24268309)
chr3 (423-456)||(25195386-25195419)
chr3 (385-458)||(27792796-27792869)
chr3 (393-458)||(53736186-53736251)
chr3 (385-458)||(54775052-54775125)
chr3 (425-469)||(2865721-2865765)
chr3 (394-438)||(8142803-8142847)
chr3 (406-458)||(10101549-10101601)
chr3 (406-458)||(10212474-10212526)
chr3 (377-465)||(21574408-21574495)
chr3 (394-469)||(23530246-23530322)
chr3 (397-465)||(30669036-30669104)
chr3 (386-458)||(36646455-36646527)
chr3 (383-443)||(41028939-41028999)
chr3 (385-456)||(32663566-32663636)
chr3 (398-444)||(36283659-36283703)
chr3 (378-464)||(25129748-25129833)
chr3 (423-457)||(26990696-26990730)
chr3 (383-469)||(36101490-36101576)
chr3 (405-463)||(49586984-49587042)
chr3 (385-455)||(53457301-53457371)
chr3 (398-451)||(2128331-2128384)
chr3 (428-469)||(3467450-3467491)
chr3 (377-418)||(9279439-9279480)
chr3 (386-466)||(25183053-25183134)
chr3 (423-468)||(26599140-26599185)
chr3 (378-455)||(28283653-28283730)
chr3 (402-451)||(33882969-33883018)
chr3 (400-469)||(40122815-40122883)
chr3 (382-443)||(41159030-41159091)
chr3 (394-443)||(49546575-49546624)
chr3 (377-438)||(49739483-49739544)
chr3 (394-455)||(52413197-52413258)
chr3 (386-458)||(905043-905115)
chr3 (389-465)||(8007761-8007837)
chr3 (406-458)||(10357378-10357430)
chr3 (406-458)||(15304420-15304472)
chr3 (426-466)||(23315591-23315631)
chr3 (378-438)||(25964359-25964419)
chr3 (377-417)||(28842971-28843011)
chr3 (394-442)||(42039092-42039140)
chr3 (402-458)||(42809242-42809298)
[»] chr6 (51 HSPs)
chr6 (377-458)||(3217263-3217344)
chr6 (377-444)||(32975894-32975961)
chr6 (394-468)||(24836262-24836336)
chr6 (384-465)||(29274295-29274376)
chr6 (407-466)||(2027471-2027530)
chr6 (377-466)||(22742282-22742371)
chr6 (386-469)||(10452422-10452505)
chr6 (378-445)||(28531627-28531694)
chr6 (424-468)||(27595630-27595674)
chr6 (394-469)||(4006647-4006722)
chr6 (378-469)||(11340687-11340777)
chr6 (377-463)||(2206506-2206592)
chr6 (407-465)||(7785808-7785866)
chr6 (384-458)||(8349737-8349811)
chr6 (384-466)||(10032494-10032576)
chr6 (383-468)||(2514624-2514709)
chr6 (377-466)||(3155092-3155181)
chr6 (377-446)||(4248874-4248943)
chr6 (385-458)||(5328898-5328971)
chr6 (378-466)||(10400186-10400274)
chr6 (377-458)||(10749301-10749381)
chr6 (378-455)||(31672544-31672621)
chr6 (377-458)||(33068634-33068715)
chr6 (379-435)||(5554861-5554917)
chr6 (386-458)||(7713950-7714022)
chr6 (394-458)||(20671938-20672002)
chr6 (385-465)||(21959652-21959732)
chr6 (426-458)||(27693512-27693544)
chr6 (423-466)||(281913-281956)
chr6 (383-458)||(7354126-7354201)
chr6 (423-458)||(27713469-27713504)
chr6 (405-444)||(27857319-27857358)
chr6 (395-458)||(32513759-32513821)
chr6 (423-465)||(1402958-1403000)
chr6 (423-469)||(2117365-2117411)
chr6 (377-455)||(6078365-6078443)
chr6 (400-466)||(9093621-9093687)
chr6 (400-458)||(24476541-24476599)
chr6 (384-457)||(28660160-28660234)
chr6 (412-458)||(28660833-28660879)
chr6 (395-469)||(34429752-34429826)
chr6 (384-456)||(1497903-1497976)
chr6 (429-458)||(2732312-2732341)
chr6 (385-458)||(4325381-4325454)
chr6 (383-444)||(8420284-8420345)
chr6 (424-469)||(11363430-11363475)
chr6 (404-444)||(2027891-2027931)
chr6 (390-458)||(2034512-2034579)
chr6 (400-452)||(9559620-9559672)
chr6 (390-454)||(29940725-29940789)
chr6 (394-434)||(33116538-33116578)
[»] scaffold0024 (2 HSPs)
scaffold0024 (377-469)||(27492-27584)
scaffold0024 (400-458)||(21351-21409)
[»] chr1 (64 HSPs)
chr1 (377-464)||(4200145-4200232)
chr1 (393-469)||(15360826-15360902)
chr1 (378-467)||(45990122-45990211)
chr1 (378-458)||(870962-871042)
chr1 (384-469)||(28467369-28467456)
chr1 (377-455)||(7274015-7274093)
chr1 (377-466)||(49516985-49517075)
chr1 (385-465)||(44032065-44032145)
chr1 (397-465)||(48830142-48830210)
chr1 (389-446)||(289168-289225)
chr1 (388-469)||(17269177-17269258)
chr1 (400-469)||(29007778-29007847)
chr1 (377-465)||(43372025-43372113)
chr1 (377-440)||(16982027-16982090)
chr1 (396-463)||(29793991-29794057)
chr1 (377-464)||(50998468-50998555)
chr1 (423-465)||(27738246-27738288)
chr1 (423-469)||(30371110-30371156)
chr1 (385-451)||(33339500-33339566)
chr1 (396-465)||(4256108-4256177)
chr1 (424-469)||(7218136-7218181)
chr1 (408-465)||(44936656-44936713)
chr1 (385-458)||(46980202-46980275)
chr1 (384-469)||(49557064-49557149)
chr1 (380-465)||(52286597-52286682)
chr1 (394-458)||(1232965-1233029)
chr1 (394-450)||(1730825-1730881)
chr1 (423-463)||(10439648-10439688)
chr1 (378-438)||(11218175-11218235)
chr1 (394-458)||(11560622-11560686)
chr1 (407-455)||(14737781-14737829)
chr1 (426-466)||(15361678-15361718)
chr1 (377-465)||(17420119-17420207)
chr1 (377-457)||(23895252-23895332)
chr1 (426-478)||(29723454-29723506)
chr1 (400-448)||(36641814-36641862)
chr1 (382-458)||(42336583-42336659)
chr1 (400-463)||(4215311-4215374)
chr1 (423-466)||(9656612-9656655)
chr1 (430-469)||(25006096-25006135)
chr1 (399-458)||(36151578-36151637)
chr1 (424-455)||(45234160-45234191)
chr1 (423-466)||(47877084-47877127)
chr1 (400-455)||(50319231-50319286)
chr1 (423-469)||(5421982-5422028)
chr1 (378-443)||(4202217-4202282)
chr1 (377-454)||(4304277-4304354)
chr1 (424-469)||(5592747-5592792)
chr1 (402-455)||(6933037-6933090)
chr1 (383-444)||(10854655-10854716)
chr1 (405-458)||(11211062-11211115)
chr1 (378-458)||(30815708-30815789)
chr1 (385-454)||(36602714-36602783)
chr1 (377-462)||(37818380-37818465)
chr1 (377-442)||(44940259-44940324)
chr1 (424-469)||(45205031-45205076)
chr1 (394-458)||(27140418-27140482)
chr1 (405-457)||(38867907-38867959)
chr1 (378-454)||(40357963-40358039)
chr1 (423-463)||(41516148-41516188)
chr1 (378-442)||(41638399-41638463)
chr1 (386-458)||(45107548-45107619)
chr1 (381-452)||(48282053-48282125)
chr1 (402-458)||(52559901-52559957)
[»] chr7 (72 HSPs)
chr7 (398-455)||(8680929-8680986)
chr7 (383-468)||(49060462-49060547)
chr7 (377-458)||(30133967-30134046)
chr7 (379-469)||(30496622-30496712)
chr7 (400-469)||(45813242-45813311)
chr7 (385-457)||(30751441-30751513)
chr7 (398-469)||(1417201-1417272)
chr7 (382-469)||(44241781-44241867)
chr7 (395-465)||(23918891-23918961)
chr7 (376-458)||(27121659-27121741)
chr7 (380-458)||(35536026-35536104)
chr7 (394-444)||(39505890-39505940)
chr7 (384-469)||(9527152-9527237)
chr7 (405-458)||(39591540-39591593)
chr7 (385-458)||(45593792-45593865)
chr7 (385-469)||(5010530-5010614)
chr7 (380-466)||(7453462-7453549)
chr7 (394-465)||(28165024-28165095)
chr7 (423-466)||(31002723-31002766)
chr7 (377-444)||(31341110-31341177)
chr7 (423-466)||(40689051-40689094)
chr7 (394-444)||(5939017-5939067)
chr7 (385-455)||(7244626-7244696)
chr7 (385-458)||(991994-992067)
chr7 (400-469)||(3501028-3501097)
chr7 (372-469)||(5373136-5373233)
chr7 (385-458)||(22759110-22759183)
chr7 (383-468)||(25511549-25511634)
chr7 (385-466)||(47004011-47004092)
chr7 (377-445)||(1431394-1431462)
chr7 (400-463)||(1432032-1432098)
chr7 (384-456)||(2223071-2223143)
chr7 (423-467)||(30456514-30456558)
chr7 (406-450)||(41875864-41875908)
chr7 (398-478)||(48157173-48157253)
chr7 (423-466)||(12835002-12835045)
chr7 (426-465)||(22296294-22296333)
chr7 (435-478)||(24895330-24895373)
chr7 (385-468)||(27481357-27481440)
chr7 (392-458)||(5272893-5272959)
chr7 (394-444)||(5276157-5276207)
chr7 (435-469)||(24909638-24909672)
chr7 (387-457)||(24973870-24973940)
chr7 (400-453)||(31149586-31149640)
chr7 (400-453)||(31167878-31167932)
chr7 (394-444)||(35808991-35809041)
chr7 (399-453)||(36532289-36532343)
chr7 (386-464)||(38496583-38496659)
chr7 (423-469)||(45777233-45777279)
chr7 (424-458)||(46825061-46825095)
chr7 (423-452)||(3635927-3635956)
chr7 (401-458)||(5006582-5006639)
chr7 (401-458)||(7623078-7623135)
chr7 (385-450)||(8445210-8445275)
chr7 (385-466)||(27548187-27548268)
chr7 (397-458)||(27626197-27626258)
chr7 (402-455)||(28178910-28178963)
chr7 (400-469)||(28613596-28613665)
chr7 (378-443)||(29574689-29574754)
chr7 (384-465)||(39551614-39551695)
chr7 (424-465)||(40428518-40428559)
chr7 (401-457)||(1373614-1373670)
chr7 (394-450)||(5269463-5269519)
chr7 (394-438)||(14823938-14823982)
chr7 (394-438)||(15270945-15270989)
chr7 (390-446)||(20476595-20476651)
chr7 (394-430)||(25507284-25507320)
chr7 (394-430)||(25558290-25558326)
chr7 (394-430)||(25558488-25558524)
chr7 (394-458)||(33894556-33894619)
chr7 (406-466)||(38010659-38010719)
chr7 (426-466)||(39908059-39908099)
[»] scaffold0590 (1 HSPs)
scaffold0590 (386-458)||(1147-1219)
[»] scaffold0275 (1 HSPs)
scaffold0275 (386-458)||(2756-2828)
[»] scaffold0103 (1 HSPs)
scaffold0103 (401-465)||(51508-51572)
[»] scaffold0549 (2 HSPs)
scaffold0549 (378-469)||(1786-1876)
scaffold0549 (378-469)||(3876-3966)
[»] scaffold0015 (1 HSPs)
scaffold0015 (420-458)||(69016-69054)
[»] scaffold0085 (1 HSPs)
scaffold0085 (424-465)||(34063-34104)
[»] scaffold0508 (1 HSPs)
scaffold0508 (383-458)||(9848-9923)
[»] scaffold0349 (1 HSPs)
scaffold0349 (423-458)||(18440-18475)
[»] scaffold0287 (1 HSPs)
scaffold0287 (423-452)||(10129-10158)
[»] scaffold0221 (1 HSPs)
scaffold0221 (401-458)||(20235-20292)
[»] scaffold0153 (2 HSPs)
scaffold0153 (429-466)||(6563-6600)
scaffold0153 (429-466)||(13583-13620)
[»] scaffold0060 (1 HSPs)
scaffold0060 (385-450)||(63366-63431)


Alignment Details
Target: chr2 (Bit Score: 554; Significance: 0; HSPs: 74)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 554; E-Value: 0
Query Start/End: Original strand, 8 - 645
Target Start/End: Complemental strand, 3424296 - 3423656
Alignment:
Q  8 acacctatgagcataaatattgtataataattaataattattgaaggaatcattaattagtatga-----taaatgcattagattgtagtgcaattaaac 102  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |     ||||||||||||||||||||||||||||||    
T  3424296 acacctatgagcataaatattgtataataattaataattattgaaagaatcattaattagtataaatgcataaatgcattagattgtagtgcaattaaac 3424197  T
Q  103 taacctgagattcatcagttagtttctcaaaaacagattcaacttctttgtggaacttgatcaattctgtcatttcctttgtcttgaaattggtaataga 202  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3424196 taacctgagattcatcagttagtttctcaaaaacagattcaacttctttgtggaacttgatcaattctgtcatttcctttgtcttgaaattggtaataga 3424097  T
Q  203 agatctcaattctatgatgtgttttgtgtacttttgaacatcttcttttatttgttgaaagtaagatgatcttgtaaaagatgaaccaaggaaatcaaaa 302  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  3424096 agatctcaattctatgatgtgttttgtgtacttttgaacatcttcttctatttgttgaaagtaagatgatctagtaaaagatgaaccaaggaaatcaaaa 3423997  T
Q  303 taagaaatagaaaggggtattgatacatttgattcaacttagacttgggccctgtttggaccaacatcttaaaaataagcgcttatcatacaagtgttta 402  Q
    || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  3423996 tatgaaatagaaaggggtattgatacatttgattcaacttagacttgggccctgtttggaccaacatcttaaaaataagtgcttatcatacaagtgttta 3423897  T
Q  403 tgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataagttgcttacacaaattggttctcgtctaaatatatat 502  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3423896 tgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataagttgcttacacaaattggttctcgtctaaatatatat 3423797  T
Q  503 acatactattgatnnnnnnnntattggtgctatgagtcgcccctaacacccgtgcttagggtcatcaccgtttgtacccgtggattagatcaaataagac 602  Q
    |||||||||||||        |||||||||||||||||||||| |||||||| ||||||||||||||||||||||||| || ||||||||||||||||||    
T  3423796 acatactattgat--aaaaaatattggtgctatgagtcgccccaaacacccgcgcttagggtcatcaccgtttgtaccggtagattagatcaaataagac 3423699  T
Q  603 tttaaaatacaaatgaaaagtatatgagcatacctttttgtca 645  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  3423698 tttaaaatacaaatgaaaagtatatgagcatacctttttgtca 3423656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 378 - 466
Target Start/End: Complemental strand, 15866821 - 15866733
Alignment:
Q  378 taagcgcttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataag 466  Q
    |||| ||||||||||||||||||| ||||||||||||||||||| |||||  |||||||||||| | || ||||||||||| |||||||    
T  15866821 taagtgcttatcatacaagtgtttgtgtataagttatttttgtaacaaaatgtaaaataaagtcgacttgttttcatataagctataag 15866733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 377 - 469
Target Start/End: Original strand, 11513817 - 11513906
Alignment:
Q  377 ataagcgcttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataagttg 469  Q
    |||||| ||||||||| ||| ||||||||||||||||||     | |||||||||||||||||||||||| ||||||||||| ||||||||||    
T  11513817 ataagcacttatcatataagggtttatgtataagttattac---aacaaaagataaaataaagtcaaattgttttcatataagctataagttg 11513906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 377 - 455
Target Start/End: Complemental strand, 44606242 - 44606164
Alignment:
Q  377 ataagcgcttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcata 455  Q
    |||||||||||| ||| ||||||||||||||||| ||||||  || ||||||||||||||||| | |||| ||||||||    
T  44606242 ataagcgcttattatataagtgtttatgtataagctattttcataacaaaagataaaataaagaccaattgttttcata 44606164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 383 - 464
Target Start/End: Original strand, 9478221 - 9478302
Alignment:
Q  383 gcttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctata 464  Q
    |||||||||| ||||||||||||||||| ||||| | || ||  |||||||||||| ||||| ||||||||||||| |||||    
T  9478221 gcttatcatataagtgtttatgtataagctatttctataacagtagataaaataaactcaaaatattttcatataagctata 9478302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 385 - 458
Target Start/End: Original strand, 35459834 - 35459907
Alignment:
Q  385 ttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataa 458  Q
    |||||||| ||||| || |||||||| ||||| | ||||||||||||||||||||||||||| ||||| |||||    
T  35459834 ttatcatataagtgattttgtataagctatttgtataccaaaagataaaataaagtcaaattgttttcgtataa 35459907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 394 - 466
Target Start/End: Original strand, 2416246 - 2416318
Alignment:
Q  394 aagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataag 466  Q
    ||||| ||||||||||||||||| |||| ||||||||||||| |||| ||||| |||| |||||| |||||||    
T  2416246 aagtgcttatgtataagttatttctgtagcaaaagataaaatgaagttaaattgttttgatataagctataag 2416318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 379 - 458
Target Start/End: Complemental strand, 17952853 - 17952774
Alignment:
Q  379 aagcgcttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataa 458  Q
    |||| ||||||||| ||| | |||| |||||| ||||| | || |||||||||||||||||||||| |||||||||||||    
T  17952853 aagcacttatcatataagagcttatatataagctatttctataacaaaagataaaataaagtcaaactattttcatataa 17952774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 394 - 469
Target Start/End: Original strand, 25609729 - 25609804
Alignment:
Q  394 aagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataagttg 469  Q
    ||||| ||||||||||| ||||| | ||  |||||||||||||||||||| |||||||| ||||| ||||||||||    
T  25609729 aagtgcttatgtataagctatttctataagaaaagataaaataaagtcaatttattttcgtataagctataagttg 25609804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 385 - 463
Target Start/End: Original strand, 3102617 - 3102695
Alignment:
Q  385 ttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctat 463  Q
    |||||||| || || ||||||||||| ||||||| || ||||| |||||||||||||||| |||||| |||||| ||||    
T  3102617 ttatcatataactgcttatgtataagctatttttatagcaaaatataaaataaagtcaaactatttttatataatctat 3102695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 382 - 468
Target Start/End: Complemental strand, 6926590 - 6926505
Alignment:
Q  382 cgcttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataagtt 468  Q
    ||||||||||| || ||||||||||||||| |||| |  |  |||||||||||||| |||||||| ||||||||||| |||||||||    
T  6926590 cgcttatcatataaatgtttatgtataagtcatttgtacaagaaaagataaaataa-gtcaaattgttttcatataaactataagtt 6926505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 394 - 468
Target Start/End: Original strand, 10143105 - 10143179
Alignment:
Q  394 aagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataagtt 468  Q
    ||||| ||||||||||||||||| | || ||||||||||||| |||||||| | |||| |||||| |||||||||    
T  10143105 aagtgcttatgtataagttatttctataacaaaagataaaattaagtcaaactgtttttatataagctataagtt 10143179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 383 - 469
Target Start/End: Complemental strand, 28803654 - 28803568
Alignment:
Q  383 gcttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataagttg 469  Q
    |||||||||| ||||| |||| ||||||||||||   || |||||||||||||||||||||| |  |||||||||| ||| ||||||    
T  28803654 gcttatcatataagtgcttatatataagttatttcgataacaaaagataaaataaagtcaaactgatttcatataagctacaagttg 28803568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 394 - 443
Target Start/End: Complemental strand, 5045294 - 5045245
Alignment:
Q  394 aagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaa 443  Q
    ||||||||||||||||| ||||||| || |||||||||||||||||||||    
T  5045294 aagtgtttatgtataagctatttttataacaaaagataaaataaagtcaa 5045245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 400 - 469
Target Start/End: Complemental strand, 13630412 - 13630343
Alignment:
Q  400 ttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataagttg 469  Q
    ||||||||||||||||| | || |||||||||| ||||||||||| | ||||||||||| | ||||||||    
T  13630412 ttatgtataagttatttctctatcaaaagataagataaagtcaaactgttttcatataatcaataagttg 13630343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 377 - 466
Target Start/End: Original strand, 29430672 - 29430760
Alignment:
Q  377 ataagcgcttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataag 466  Q
    ||||||| |||||||||||| ||||||||||||| ||||| | || |||||| | ||||||||||||| | ||||| ||||| |||||||    
T  29430672 ataagcgtttatcatacaagggtttatgtataagctatttctataacaaaag-ttaaataaagtcaaactgttttcttataagctataag 29430760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 377 - 458
Target Start/End: Complemental strand, 42817530 - 42817449
Alignment:
Q  377 ataagcgcttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataa 458  Q
    ||||||| |||||||| ||||||| || |||| ||||||| | |||||||||||||||| |||||||  | |||||||||||    
T  42817530 ataagcgtttatcatataagtgttgatttatatgttatttctataccaaaagataaaatgaagtcaagctgttttcatataa 42817449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 402 - 458
Target Start/End: Original strand, 3458598 - 3458654
Alignment:
Q  402 atgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataa 458  Q
    |||| |||||||||||| || |||||||||||||||||||||| | |||||||||||    
T  3458598 atgtctaagttatttttataacaaaagataaaataaagtcaaacttttttcatataa 3458654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 388 - 468
Target Start/End: Original strand, 3673734 - 3673814
Alignment:
Q  388 tcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataagtt 468  Q
    ||||| ||||| |||||||| |||||||| | || ||||| |||||||||||| ||||| |||||||||||  ||||||||    
T  3673734 tcatataagtgcttatgtattagttatttctataacaaaatataaaataaagttaaattgttttcatataagttataagtt 3673814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 377 - 441
Target Start/End: Original strand, 15173442 - 15173506
Alignment:
Q  377 ataagcgcttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtc 441  Q
    |||| |||||||| ||||||||| |||||||||||||||| | || |||||||| ||||||||||    
T  15173442 ataaacgcttatcgtacaagtgtctatgtataagttatttctataacaaaagatgaaataaagtc 15173506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 385 - 465
Target Start/End: Complemental strand, 18962184 - 18962104
Alignment:
Q  385 ttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataa 465  Q
    |||||||  ||||| |||||||| || ||||||| || |||||||||||||||||| ||| | ||||||||||| ||||||    
T  18962184 ttatcatgtaagtgcttatgtattagctatttttataacaaaagataaaataaagttaaactgttttcatataagctataa 18962104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 425 - 469
Target Start/End: Complemental strand, 31740065 - 31740021
Alignment:
Q  425 aaagataaaataaagtcaaattattttcatataacctataagttg 469  Q
    |||||||||||||||||||| ||||||||||||| ||||||||||    
T  31740065 aaagataaaataaagtcaaactattttcatataagctataagttg 31740021  T

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Target: chr2; HSP #23
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 402 - 469
Target Start/End: Complemental strand, 23143107 - 23143040
Alignment:
Q  402 atgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataagttg 469  Q
    ||||||||| |||||||||| ||||||||||||| || ||||||| ||||| ||||| |||| |||||    
T  23143107 atgtataagctatttttgtaacaaaagataaaatcaaatcaaattgttttcttataagctattagttg 23143040  T

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Target: chr2; HSP #24
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 402 - 469
Target Start/End: Complemental strand, 23554897 - 23554830
Alignment:
Q  402 atgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataagttg 469  Q
    ||||||||| |||||||||| ||||||||||||| || ||||||| ||||| ||||| |||| |||||    
T  23554897 atgtataagctatttttgtaacaaaagataaaatcaaatcaaattgttttcttataagctattagttg 23554830  T

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Target: chr2; HSP #25
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 386 - 449
Target Start/End: Original strand, 31461363 - 31461426
Alignment:
Q  386 tatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattatt 449  Q
    ||||||| ||||| |||| |||||| ||||| | || |||||||||||||||||||||||||||    
T  31461363 tatcatataagtggttatatataagctatttctataacaaaagataaaataaagtcaaattatt 31461426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 378 - 469
Target Start/End: Original strand, 32694130 - 32694220
Alignment:
Q  378 taagcgcttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataagttg 469  Q
    ||||||||||||||| |||| || ||||||||| ||||| | || |||||||||||||||| ||| | |||||| ||||||  |||||||||    
T  32694130 taagcgcttatcatataagtatt-atgtataagctatttctatatcaaaagataaaataaaatcagactatttttatataatttataagttg 32694220  T

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Target: chr2; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 400 - 458
Target Start/End: Original strand, 16946981 - 16947039
Alignment:
Q  400 ttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataa 458  Q
    ||||||||||| ||||| ||||  ||||||| |||||||||||||||||||||| ||||    
T  16946981 ttatgtataagctatttgtgtaagaaaagattaaataaagtcaaattattttcacataa 16947039  T

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Target: chr2; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 400 - 458
Target Start/End: Original strand, 17017646 - 17017704
Alignment:
Q  400 ttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataa 458  Q
    ||||||||||| ||||| ||||  ||||||| |||||||||||||||||||||| ||||    
T  17017646 ttatgtataagctatttgtgtaagaaaagattaaataaagtcaaattattttcacataa 17017704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 400 - 458
Target Start/End: Original strand, 34339845 - 34339903
Alignment:
Q  400 ttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataa 458  Q
    |||||| |||||| |||||  | |||||||||||||||||||||||||||||| |||||    
T  34339845 ttatgtgtaagttgtttttaaaacaaaagataaaataaagtcaaattattttcgtataa 34339903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 398 - 468
Target Start/End: Original strand, 39929804 - 39929874
Alignment:
Q  398 gtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataagtt 468  Q
    |||||| ||||||||||| || || ||||||||||||| || ||||||| |||| |||||| |||||||||    
T  39929804 gtttatttataagttattgttataacaaaagataaaatcaaatcaaattgtttttatataagctataagtt 39929874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 403 - 469
Target Start/End: Original strand, 43199356 - 43199422
Alignment:
Q  403 tgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataagttg 469  Q
    |||||||||||||| |  | |||||||||||||||||| ||||||| ||| ||||| ||||||||||    
T  43199356 tgtataagttatttctacaacaaaagataaaataaagttaaattatcttcgtataagctataagttg 43199422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 377 - 458
Target Start/End: Original strand, 43808492 - 43808573
Alignment:
Q  377 ataagcgcttatcatacaagtgtttatgtataagttatttttg-taccaaaagataaaataaagtcaaattattttcatataa 458  Q
    |||||||| ||||||| ||||||||||||||||| |||||||  || ||||  |||||||||||| ||| |||||||||||||    
T  43808492 ataagcgcgtatcatataagtgtttatgtataagctattttttataacaaac-ataaaataaagttaaactattttcatataa 43808573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 394 - 451
Target Start/End: Original strand, 4026750 - 4026807
Alignment:
Q  394 aagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattatttt 451  Q
    ||||| |||| |||||| ||||||| || |||||||||||||||||| ||||||||||    
T  4026750 aagtgcttatctataagctatttttatagcaaaagataaaataaagttaaattatttt 4026807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 378 - 455
Target Start/End: Original strand, 10150672 - 10150749
Alignment:
Q  378 taagcgcttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcata 455  Q
    ||||| ||||| ||| ||||||||||||||||||||||| | ||  |||||||||||||| || ||||  ||||||||    
T  10150672 taagcacttattatataagtgtttatgtataagttatttctataataaaagataaaataacgttaaatggttttcata 10150749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 380 - 456
Target Start/End: Original strand, 35809852 - 35809927
Alignment:
Q  380 agcgcttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatat 456  Q
    ||||||||||||| ||||| |||||||||||||||||   |  | |||||||||||||| ||||||| |||||||||    
T  35809852 agcgcttatcatataagtgcttatgtataagttatttccatgac-aaagataaaataaaatcaaattgttttcatat 35809927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 428 - 464
Target Start/End: Original strand, 43173189 - 43173225
Alignment:
Q  428 gataaaataaagtcaaattattttcatataacctata 464  Q
    ||||||||||||||||||||||||||||||| |||||    
T  43173189 gataaaataaagtcaaattattttcatataagctata 43173225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 381 - 441
Target Start/End: Complemental strand, 43431594 - 43431534
Alignment:
Q  381 gcgcttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtc 441  Q
    |||||||||||| ||||||| |||||||||||||||   || ||||||||||| |||||||    
T  43431594 gcgcttatcatataagtgttaatgtataagttatttcaataacaaaagataaagtaaagtc 43431534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 405 - 456
Target Start/End: Complemental strand, 1939458 - 1939407
Alignment:
Q  405 tataagttatttttgtaccaaaagataaaataaagtcaaattattttcatat 456  Q
    |||||||||||| | || |||||||||||||||||| ||| |||||||||||    
T  1939458 tataagttatttctataacaaaagataaaataaagtgaaactattttcatat 1939407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 394 - 465
Target Start/End: Complemental strand, 11344421 - 11344350
Alignment:
Q  394 aagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataa 465  Q
    ||||| ||||| ||||| ||||| | || |||||||||||| ||||||||||| |||||||| || ||||||    
T  11344421 aagtgcttatgcataagatatttctataacaaaagataaaagaaagtcaaattgttttcatacaagctataa 11344350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 394 - 469
Target Start/End: Complemental strand, 35755639 - 35755564
Alignment:
Q  394 aagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataagttg 469  Q
    ||||||||||||||||| ||||| | ||   ||| | |||||||||||||||| ||||||| ||| ||||||||||    
T  35755639 aagtgtttatgtataagctatttctataatcaaatagaaaataaagtcaaattgttttcatgtaagctataagttg 35755564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 377 - 444
Target Start/End: Complemental strand, 38239705 - 38239638
Alignment:
Q  377 ataagcgcttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaa 444  Q
    |||||| || |||||  ||||||||||||||||| ||||| | || ||||||||||||| ||||||||    
T  38239705 ataagcactcatcatgtaagtgtttatgtataagctatttctataacaaaagataaaatcaagtcaaa 38239638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 402 - 457
Target Start/End: Complemental strand, 40837557 - 40837502
Alignment:
Q  402 atgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatata 457  Q
    ||||||||| ||||| | || ||||||||||| |||||||||||| ||||||||||    
T  40837557 atgtataagctatttctataacaaaagataaattaaagtcaaattgttttcatata 40837502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 377 - 463
Target Start/End: Original strand, 6547826 - 6547912
Alignment:
Q  377 ataagcgcttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctat 463  Q
    |||| ||||| || ||||||||||  |||||||||||||| | || ||||||  |||| ||||||||| |||||| |||||| ||||    
T  6547826 ataaccgcttttcttacaagtgttcgtgtataagttatttctatagcaaaagtcaaaacaaagtcaaaatatttttatataagctat 6547912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 423 - 469
Target Start/End: Complemental strand, 6993832 - 6993786
Alignment:
Q  423 caaaagataaaataaagtcaaattattttcatataacctataagttg 469  Q
    ||||||||||||||| |||||||||| ||||||||| ||||| ||||    
T  6993832 caaaagataaaataaggtcaaattatattcatataagctataggttg 6993786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 394 - 452
Target Start/End: Original strand, 7825185 - 7825243
Alignment:
Q  394 aagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttc 452  Q
    |||||||| |||||||| ||||||| || ||||||||||| |||||| ||||| |||||    
T  7825185 aagtgtttctgtataagctatttttataacaaaagataaagtaaagttaaatttttttc 7825243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 424 - 458
Target Start/End: Complemental strand, 10646396 - 10646362
Alignment:
Q  424 aaaagataaaataaagtcaaattattttcatataa 458  Q
    ||||||||||||||||||||||||||||| |||||    
T  10646396 aaaagataaaataaagtcaaattattttcctataa 10646362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 384 - 458
Target Start/End: Complemental strand, 11863797 - 11863723
Alignment:
Q  384 cttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataa 458  Q
    ||||| ||| ||||| |||||||| ||||| ||||  | |||||||||||||| ||| ||||| |||||||||||    
T  11863797 cttattatataagtggttatgtatgagttagttttacagcaaaagataaaatagagttaaattgttttcatataa 11863723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 385 - 463
Target Start/End: Original strand, 14209201 - 14209279
Alignment:
Q  385 ttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctat 463  Q
    |||||||| |||||||| ||| |||| |||||   || |||||||||||||||| ||||| | ||||||||||| ||||    
T  14209201 ttatcatataagtgtttctgtctaagctatttcaataacaaaagataaaataaattcaaactgttttcatataagctat 14209279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 377 - 443
Target Start/End: Complemental strand, 33197393 - 33197327
Alignment:
Q  377 ataagcgcttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaa 443  Q
    |||| ||||||||||| ||||| |||| |||||| ||||| | || ||||||||| |||||||||||    
T  33197393 ataaacgcttatcatataagtgcttatctataagctatttctataacaaaagatagaataaagtcaa 33197327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 423 - 469
Target Start/End: Original strand, 33942112 - 33942158
Alignment:
Q  423 caaaagataaaataaagtcaaattattttcatataacctataagttg 469  Q
    |||||||||||||||||||||| | ||||||| ||| ||||||||||    
T  33942112 caaaagataaaataaagtcaaactgttttcatgtaagctataagttg 33942158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 378 - 468
Target Start/End: Original strand, 37053511 - 37053601
Alignment:
Q  378 taagcgcttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataagtt 468  Q
    ||||| ||||||||| ||||| |||||||||   ||||| | || || || |||||||||||||||| | |||||||||||  ||||||||    
T  37053511 taagcacttatcatataagtgcttatgtatagactatttctataacagaaaataaaataaagtcaaactgttttcatataagttataagtt 37053601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 423 - 469
Target Start/End: Complemental strand, 37292455 - 37292409
Alignment:
Q  423 caaaagataaaataaagtcaaattattttcatataacctataagttg 469  Q
    |||||||||||||||||| ||| ||||||||||||| |||| |||||    
T  37292455 caaaagataaaataaagtaaaactattttcatataagctattagttg 37292409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 383 - 469
Target Start/End: Original strand, 37766720 - 37766806
Alignment:
Q  383 gcttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataagttg 469  Q
    |||||||||| ||||| |||||||| || ||||  | |  ||||| |||||||||||||||| | ||||| ||||| ||||||||||    
T  37766720 gcttatcatataagtgcttatgtattagctattcatatgacaaaaaataaaataaagtcaaaatgttttcgtataaactataagttg 37766806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 385 - 455
Target Start/End: Complemental strand, 40672942 - 40672872
Alignment:
Q  385 ttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcata 455  Q
    |||||||  |||| |||||||||||||||||| | |   ||||||||||||||||||| ||| ||||||||    
T  40672942 ttatcatttaagtttttatgtataagttatttctatgaaaaaagataaaataaagtcacattgttttcata 40672872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 429 - 466
Target Start/End: Complemental strand, 1160846 - 1160809
Alignment:
Q  429 ataaaataaagtcaaattattttcatataacctataag 466  Q
    |||||||||||||||| ||||||||||||| |||||||    
T  1160846 ataaaataaagtcaaactattttcatataagctataag 1160809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 394 - 451
Target Start/End: Original strand, 3611159 - 3611216
Alignment:
Q  394 aagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattatttt 451  Q
    ||||| ||||||||||||||||| | || |||||| ||||||||||| ||||| ||||    
T  3611159 aagtgcttatgtataagttatttctatagcaaaaggtaaaataaagttaaattgtttt 3611216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 384 - 469
Target Start/End: Original strand, 4550700 - 4550785
Alignment:
Q  384 cttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataagttg 469  Q
    ||||||| | ||||| ||||||||||||| |||   ||  |||||||||||||| |||||  | ||||||||||| ||||||||||    
T  4550700 cttatcacataagtgcttatgtataagttgtttccataataaaagataaaataacgtcaagctgttttcatataaactataagttg 4550785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 423 - 452
Target Start/End: Original strand, 6988077 - 6988106
Alignment:
Q  423 caaaagataaaataaagtcaaattattttc 452  Q
    ||||||||||||||||||||||||||||||    
T  6988077 caaaagataaaataaagtcaaattattttc 6988106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 394 - 455
Target Start/End: Original strand, 7282951 - 7283012
Alignment:
Q  394 aagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcata 455  Q
    ||||||||||||||||| ||||||| ||  |||||| ||||| |||||||| | ||||||||    
T  7282951 aagtgtttatgtataagctatttttataagaaaagaaaaaatgaagtcaaactgttttcata 7283012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 388 - 441
Target Start/End: Original strand, 13864577 - 13864630
Alignment:
Q  388 tcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtc 441  Q
    ||||| ||||||||||||||||| ||||| | || |||||| ||||||||||||    
T  13864577 tcatataagtgtttatgtataagctatttctataacaaaaggtaaaataaagtc 13864630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 394 - 455
Target Start/End: Original strand, 15171183 - 15171244
Alignment:
Q  394 aagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcata 455  Q
    ||||||||||||||||||| ||| | || || |||||||| |||||||||| | ||||||||    
T  15171183 aagtgtttatgtataagttttttctataacagaagataaattaaagtcaaaatgttttcata 15171244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 401 - 466
Target Start/End: Complemental strand, 28039462 - 28039397
Alignment:
Q  401 tatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataag 466  Q
    |||| ||||| |||||| ||  || |||||||||||||||| |||| ||||||||||| |||||||    
T  28039462 tatgaataagctattttggttacacaagataaaataaagtccaattgttttcatataaactataag 28039397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 377 - 453
Target Start/End: Complemental strand, 29503235 - 29503161
Alignment:
Q  377 ataagcgcttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttca 453  Q
    |||||| ||||| ||| ||||||||||||||| | ||||| | || |||  ||||||||||||||||| ||||||||    
T  29503235 ataagcacttattatagaagtgtttatgtatatgatatttctataacaa--gataaaataaagtcaaactattttca 29503161  T

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Target: chr2; HSP #64
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 424 - 465
Target Start/End: Original strand, 33944568 - 33944609
Alignment:
Q  424 aaaagataaaataaagtcaaattattttcatataacctataa 465  Q
    |||| |||||||||||||||||| ||||||||||| ||||||    
T  33944568 aaaatataaaataaagtcaaattgttttcatataagctataa 33944609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #65
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 385 - 446
Target Start/End: Complemental strand, 35252268 - 35252207
Alignment:
Q  385 ttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaatt 446  Q
    |||||||| || |||||||||||| ||||||  | ||  |||||||||||||||||||||||    
T  35252268 ttatcatataaatgtttatgtatatgttattcctttaataaaagataaaataaagtcaaatt 35252207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #66
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 400 - 469
Target Start/End: Original strand, 39983282 - 39983350
Alignment:
Q  400 ttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataagttg 469  Q
    |||| |||||| |||||||||| |||| | ||||||||| | |||| |||||||||||| ||||||||||    
T  39983282 ttatatataagctatttttgtaacaaagg-taaaataaaataaaataattttcatataagctataagttg 39983350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #67
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 406 - 451
Target Start/End: Original strand, 41407246 - 41407291
Alignment:
Q  406 ataagttatttttgtaccaaaagataaaataaagtcaaattatttt 451  Q
    ||||| ||||| ||||||||||||||||||||||| ||||| ||||    
T  41407246 ataagctatttctgtaccaaaagataaaataaagttaaattgtttt 41407291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #68
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 425 - 469
Target Start/End: Complemental strand, 5043666 - 5043622
Alignment:
Q  425 aaagataaaataaagtcaaattattttcatataacctataagttg 469  Q
    |||||||||||||||||||| | ||||||||||| ||| ||||||    
T  5043666 aaagataaaataaagtcaaactgttttcatataagctagaagttg 5043622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #69
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 406 - 478
Target Start/End: Original strand, 14666493 - 14666565
Alignment:
Q  406 ataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataagttgcttacacaa 478  Q
    ||||||| ||||  || |||||||||||||||||||||| |  ||||||||||  ||||||||| || |||||    
T  14666493 ataagttgttttgataacaaaagataaaataaagtcaaactgatttcatataagttataagttgttttcacaa 14666565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #70
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 406 - 466
Target Start/End: Complemental strand, 22681310 - 22681250
Alignment:
Q  406 ataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataag 466  Q
    |||| ||||||||  | |||||||||||| |||| |||||| ||||||||||| |||||||    
T  22681310 ataaattatttttaaaacaaaagataaaacaaagccaaattgttttcatataagctataag 22681250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #71
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 400 - 452
Target Start/End: Original strand, 23747243 - 23747295
Alignment:
Q  400 ttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttc 452  Q
    ||||||||||| ||||||| || ||||||||||||| || | |||||||||||    
T  23747243 ttatgtataagctatttttatatcaaaagataaaatgaatttaaattattttc 23747295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #72
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 402 - 454
Target Start/End: Original strand, 28933765 - 28933817
Alignment:
Q  402 atgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcat 454  Q
    ||||||||| ||||| | || ||||||||||||| || |||||||||||||||    
T  28933765 atgtataagctatttatataacaaaagataaaatcaaatcaaattattttcat 28933817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #73
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 400 - 440
Target Start/End: Original strand, 44119723 - 44119763
Alignment:
Q  400 ttatgtataagttatttttgtaccaaaagataaaataaagt 440  Q
    ||||||||||||||||||| ||  |||||||||||||||||    
T  44119723 ttatgtataagttatttttatagtaaaagataaaataaagt 44119763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #74
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 386 - 454
Target Start/End: Complemental strand, 44458483 - 44458415
Alignment:
Q  386 tatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcat 454  Q
    ||||||| |||| |||||||||||| |||||||  | ||| ||||||| |||||||||  |||||||||    
T  44458483 tatcatataagtatttatgtataagctattttttcaacaacagataaactaaagtcaagctattttcat 44458415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 388; Significance: 0; HSPs: 67)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 388; E-Value: 0
Query Start/End: Original strand, 26 - 645
Target Start/End: Original strand, 11917130 - 11917739
Alignment:
Q  26 attgtataataattaataattattgaaggaatcattaattagtatgataaatgcattagattgtagtgcaattaaactaacctgagattcatcagttagt 125  Q
    ||||||||||||||||| ||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  11917130 attgtataataattaatgattattgaaagaatcattaattaatatgataaatgcattagattgtagtgcaattaaactaacctaagattcatcagttagt 11917229  T
Q  126 ttctcaaaaacagattcaacttctttgtggaacttgatcaattctgtcatttcctttgtcttgaaattggtaatagaagatctcaattctatgatgtgtt 225  Q
    ||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  11917230 ttctcaagaacagattcaacatctttgtggaacttgatcaattctgtcatttcctttgtcttgaaattggtaatggaagatctcaattctatgatgtgtt 11917329  T
Q  226 ttgtgtacttttgaacatcttcttttatttgttgaaagtaagatgatcttgtaaaagatgaaccaaggaaatc-aaaataagaaatagaaaggggtattg 324  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||| |||||| |  ||||||||||||| |||||||||||||||||||||   |     
T  11917330 ttgtgtacttttgaacatcttcttctatttgttgaaagtaagatgatctagtaaaatacaaaccaaggaaatcaaaaataagaaatagaaagggg--gtc 11917427  T
Q  325 atacatttgattcaacttagacttgggccctgtttggaccaacatcttaaaaa-taagcgcttatcatacaagtgtttatgtataagttatttttgtacc 423  Q
    |||||||||||||||||||| |||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||      |||||||||||| |    
T  11917428 atacatttgattcaacttagtcttgggacctgtttggaccaacatcttaaaaattaagcgcttatcatacaagtgtttat------gttatttttgtaac 11917521  T
Q  424 aaaagataaaataaagtcaaattattttcatataacctataagttgcttacacaaattggttctcgtctaaatatatatacatactattgatnnnnnnnn 523  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||| |             
T  11917522 aaaagataaaataaagtcaaattattttcatataacctataagttgcttacaaaaattggttctcgtctaaatatttatacatactattaa---aaaaaa 11917618  T
Q  524 tattggtgctatgagtcgcccctaacacccgtgcttagggtcatcaccgtttgtacccgtggattagatcaaataagactttaaaatacaaatgaaaagt 623  Q
    |||||  ||||||| ||||||||| |||| | |||||||||||||||  |||||||| || ||| |  ||||||||| |||||||| ||||||| |||||    
T  11917619 tattgccgctatgattcgcccctaccacctgcgcttagggtcatcactttttgtaccagtagataaattcaaataagcctttaaaacacaaatg-aaagt 11917717  T
Q  624 atatgagcatacctttttgtca 645  Q
    |||||||| |||||||||||||    
T  11917718 atatgagcctacctttttgtca 11917739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 91; E-Value: 9e-44
Query Start/End: Original strand, 100 - 274
Target Start/End: Original strand, 35742948 - 35743122
Alignment:
Q  100 aactaacctgagattcatcagttagtttctcaaaaacagattcaacttctttgtggaacttgatcaattctgtcatttcctttgtcttgaaattggtaat 199  Q
    |||| ||||| |||||||||||||| ||||||| || ||||||||| ||||||||||||||| ||||||| ||||| ||||||||||||||||| |||||    
T  35742948 aacttacctgtgattcatcagttagattctcaagaatagattcaacatctttgtggaacttgctcaattcggtcatgtcctttgtcttgaaattagtaat 35743047  T
Q  200 agaagatctcaattctatgatgtgttttgtgtacttttgaacatcttcttttatttgttgaaagtaagatgatct 274  Q
        ||||||| ||||||||| |||||||||||||||||||||||||||| |||||||   |||||||| |||||    
T  35743048 tcttgatctcagttctatgatttgttttgtgtacttttgaacatcttcttctatttgtatgaagtaagaagatct 35743122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 381 - 469
Target Start/End: Original strand, 49219059 - 49219147
Alignment:
Q  381 gcgcttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataagttg 469  Q
    ||||||||||||  |||| ||| ||||||||||||| | || ||||| |||||||||||||||||||||||||||||| ||||||||||    
T  49219059 gcgcttatcatatgagtggttaggtataagttatttctataacaaaatataaaataaagtcaaattattttcatataagctataagttg 49219147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 389 - 469
Target Start/End: Original strand, 4071811 - 4071890
Alignment:
Q  389 catacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataagttg 469  Q
    |||| |||||||||| ||||| | |||| | || |||||||||||||||||||||||||||||||||||| ||||||||||    
T  4071811 catataagtgtttatatataact-atttctataacaaaagataaaataaagtcaaattattttcatataagctataagttg 4071890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 378 - 453
Target Start/End: Complemental strand, 28582062 - 28581988
Alignment:
Q  378 taagcgcttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttca 453  Q
    ||||| ||||||||| ||||||||||||||||  ||||||| || |||||||||||||||||||||| ||||||||    
T  28582062 taagcacttatcatagaagtgtttatgtataaactattttt-tagcaaaagataaaataaagtcaaactattttca 28581988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 394 - 469
Target Start/End: Complemental strand, 42322016 - 42321941
Alignment:
Q  394 aagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataagttg 469  Q
    ||||||||||| ||||| ||||||| || |||| ||||||||||||||||||| |||||||||||  |||||||||    
T  42322016 aagtgtttatgaataagctatttttataacaaatgataaaataaagtcaaattgttttcatataaattataagttg 42321941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 379 - 465
Target Start/End: Original strand, 30024618 - 30024704
Alignment:
Q  379 aagcgcttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataa 465  Q
    ||||| |||||||| ||||  ||||| ||||||||||| | || |||||||||||||||||| ||||| ||||||||||| ||||||    
T  30024618 aagcgtttatcatataagtacttatgcataagttatttctataacaaaagataaaataaagtaaaattgttttcatataagctataa 30024704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 378 - 463
Target Start/End: Original strand, 19422335 - 19422420
Alignment:
Q  378 taagcgcttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctat 463  Q
    ||||||||||||||| || || ||||||||||||||||| | || ||||||||| ||||||||||||   ||||||||||| ||||    
T  19422335 taagcgcttatcatataaatgcttatgtataagttatttctataacaaaagatataataaagtcaaacatttttcatataaactat 19422420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 377 - 444
Target Start/End: Original strand, 55599082 - 55599149
Alignment:
Q  377 ataagcgcttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaa 444  Q
    |||||||| ||||| | |||||||||| ||||||||| ||||||| ||||||| ||||||||||||||    
T  55599082 ataagcgcgtatcacataagtgtttatatataagttacttttgtaacaaaagacaaaataaagtcaaa 55599149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 386 - 478
Target Start/End: Complemental strand, 8422982 - 8422892
Alignment:
Q  386 tatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataagttgcttacacaa 478  Q
    ||||||| | ||| ||||||||||| ||||||| ||  ||||||||||||||||||  ||| ||||||||||| |||||||||| || |||||    
T  8422982 tatcatatatgtgcttatgtataagctatttttataaaaaaagataaaataaagtc--attgttttcatataagctataagttgttttcacaa 8422892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 377 - 469
Target Start/End: Original strand, 24193501 - 24193593
Alignment:
Q  377 ataagcgcttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataagttg 469  Q
    |||| ||||||||||| ||||  |||||||||||||||||||  | ||||| |||||| | ||| ||| |||||||||||||  |||||||||    
T  24193501 ataaacgcttatcatataagtacttatgtataagttatttttacaacaaaatataaaacagagttaaactattttcatataagttataagttg 24193593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 394 - 465
Target Start/End: Original strand, 8130107 - 8130178
Alignment:
Q  394 aagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataa 465  Q
    ||||| ||| |||| |||| ||| | || |||||||||| ||||||||||||||||||||||||| ||||||    
T  8130107 aagtgcttacgtatgagttctttctataacaaaagataacataaagtcaaattattttcatataagctataa 8130178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 426 - 469
Target Start/End: Complemental strand, 13949949 - 13949906
Alignment:
Q  426 aagataaaataaagtcaaattattttcatataacctataagttg 469  Q
    ||||||||||||||||||||| ||||||||||| ||||||||||    
T  13949949 aagataaaataaagtcaaattgttttcatataagctataagttg 13949906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 377 - 467
Target Start/End: Original strand, 26883910 - 26884001
Alignment:
Q  377 ataagcgcttatcat-acaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataagt 467  Q
    ||||||||||||| | | ||||| ||||||||||||||||| | ||  || ||||||||| |||| ||||| ||||||||||| ||||||||    
T  26883910 ataagcgcttatcttgataagtgattatgtataagttatttctctaagaagagataaaatgaagttaaattgttttcatataagctataagt 26884001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 378 - 469
Target Start/End: Complemental strand, 30207723 - 30207633
Alignment:
Q  378 taagcgcttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataagttg 469  Q
    ||||| ||||||||| ||||| ||||||||| |||| || | || ||||| |||||||||| ||||| | ||||||||||| ||||||||||    
T  30207723 taagcacttatcatataagtgcttatgtatatgttagttctataacaaaaaataaaataaa-tcaaactgttttcatataagctataagttg 30207633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 380 - 455
Target Start/End: Original strand, 35743223 - 35743298
Alignment:
Q  380 agcgcttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcata 455  Q
    ||||||||||||| | ||||| ||||| ||||||||| | || ||||||||||||||||| |||| || |||||||    
T  35743223 agcgcttatcatatatgtgttgatgtacaagttatttctataacaaaagataaaataaaggcaaactactttcata 35743298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 398 - 465
Target Start/End: Complemental strand, 44119295 - 44119228
Alignment:
Q  398 gtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataa 465  Q
    ||||||||||||||||||| | || |||||||||||| ||||||||  | ||||||||||| ||||||    
T  44119295 gtttatgtataagttatttctatagcaaaagataaaacaaagtcaatatgttttcatataagctataa 44119228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 407 - 458
Target Start/End: Original strand, 52735068 - 52735119
Alignment:
Q  407 taagttatttttgtaccaaaagataaaataaagtcaaattattttcatataa 458  Q
    |||| ||||| |||| ||||||||||||||||||||||||| ||||||||||    
T  52735068 taagctatttctgtaacaaaagataaaataaagtcaaattactttcatataa 52735119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 378 - 472
Target Start/End: Complemental strand, 3549683 - 3549590
Alignment:
Q  378 taagcgcttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataagttgctt 472  Q
    |||||| |||| ||| ||||| | ||| ||||||| | ||| || ||||||||||||| || |||||| ||||||||||||||||| ||||||||    
T  3549683 taagcgtttattatataagtgctaatgcataagtt-tctttataacaaaagataaaatcaaatcaaatgattttcatataacctatgagttgctt 3549590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 385 - 471
Target Start/End: Original strand, 41606110 - 41606196
Alignment:
Q  385 ttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataagttgct 471  Q
    |||||||||||||||||||||| ||  ||||||  || |||| ||||||||||||||||||  || | |||||| ||||||| ||||    
T  41606110 ttatcatacaagtgtttatgtaaaaactattttgataacaaaggataaaataaagtcaaatggttcttatataagctataagctgct 41606196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 394 - 444
Target Start/End: Complemental strand, 51044596 - 51044546
Alignment:
Q  394 aagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaa 444  Q
    ||||||||||||||||| ||||| | || ||||||||||||||||||||||    
T  51044596 aagtgtttatgtataagctatttctataacaaaagataaaataaagtcaaa 51044546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 384 - 466
Target Start/End: Complemental strand, 54325184 - 54325102
Alignment:
Q  384 cttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataag 466  Q
    ||||||||| ||||| || |||||||  ||||| | |  |||||||||||||||||||||| | ||||||||||| |||||||    
T  54325184 cttatcatataagtgcttgtgtataaactatttctattacaaaagataaaataaagtcaaactgttttcatataagctataag 54325102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 379 - 455
Target Start/End: Original strand, 4191657 - 4191734
Alignment:
Q  379 aagcgcttatcatacaagtgtttatgtataagttatttttgtaccaaaagat-aaaataaagtcaaattattttcata 455  Q
    ||||| |||||||| ||||| ||||||||||| ||||| | || |||||||| |||||||||||||| | ||||||||    
T  4191657 aagcgtttatcatataagtgcttatgtataagctatttctataacaaaagataaaaataaagtcaaactgttttcata 4191734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 412 - 469
Target Start/End: Original strand, 10192235 - 10192292
Alignment:
Q  412 tatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataagttg 469  Q
    ||||||| || ||||||||| |||||||||||||| |||||||||||  |||||||||    
T  10192235 tatttttataacaaaagatagaataaagtcaaattgttttcatataagttataagttg 10192292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 381 - 458
Target Start/End: Complemental strand, 22684666 - 22684589
Alignment:
Q  381 gcgcttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataa 458  Q
    |||||||||||| || || || |||||||| ||||| | || |||| | ||||||||||||||||| |||||||||||    
T  22684666 gcgcttatcatataaatgcttctgtataagctatttctataacaaacggtaaaataaagtcaaattgttttcatataa 22684589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 405 - 466
Target Start/End: Original strand, 27623579 - 27623640
Alignment:
Q  405 tataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataag 466  Q
    |||||| ||||| | || |||||||||||||||||||||| |||||| |||||| |||||||    
T  27623579 tataagatatttgtataacaaaagataaaataaagtcaaactattttaatataagctataag 27623640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 385 - 458
Target Start/End: Original strand, 36734817 - 36734890
Alignment:
Q  385 ttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataa 458  Q
    |||||||| ||||| ||||||||||  | ||| | || |||||| ||||||||||||||| |||||||||||||    
T  36734817 ttatcatataagtgcttatgtataatctctttctataacaaaaggtaaaataaagtcaaactattttcatataa 36734890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 397 - 458
Target Start/End: Original strand, 40865746 - 40865806
Alignment:
Q  397 tgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataa 458  Q
    |||||||||||||  ||||||| || ||||||||| |||||||||||| |||||||||||||    
T  40865746 tgtttatgtataaactatttttctaacaaaagatagaataaagtcaaa-tattttcatataa 40865806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 388 - 453
Target Start/End: Original strand, 47970245 - 47970310
Alignment:
Q  388 tcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttca 453  Q
    ||||| ||||| ||||||||||| ||||| | || ||||||||||||| |||||||| ||||||||    
T  47970245 tcatataagtgcttatgtataagctatttctataacaaaagataaaatgaagtcaaactattttca 47970310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 385 - 442
Target Start/End: Complemental strand, 51556013 - 51555956
Alignment:
Q  385 ttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtca 442  Q
    |||||||| ||||| ||||||||||| |||| || || ||||||||||||||||||||    
T  51556013 ttatcatataagtgcttatgtataagctattattataacaaaagataaaataaagtca 51555956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 377 - 452
Target Start/End: Original strand, 485997 - 486073
Alignment:
Q  377 ataagcgcttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaat-aaagtcaaattattttc 452  Q
    |||||||||||||||| ||||| ||||||||| | ||||| |  | ||||||||||||| ||||||||||| |||||    
T  485997 ataagcgcttatcataaaagtgcttatgtatatgctatttctaaaacaaaagataaaataaaagtcaaattgttttc 486073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 377 - 445
Target Start/End: Complemental strand, 3249868 - 3249800
Alignment:
Q  377 ataagcgcttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaat 445  Q
    |||||||||||||||| |||||| ||||| |||||||||| | |   ||||||| ||||||||||||||    
T  3249868 ataagcgcttatcatataagtgtgtatgtgtaagttatttctatgataaaagatgaaataaagtcaaat 3249800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 377 - 469
Target Start/End: Original strand, 24443954 - 24444046
Alignment:
Q  377 ataagcgcttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataagttg 469  Q
    |||||| ||||||||| ||||  |||||||||||  |||| |  | ||||| |||||||||| |||||  |||||||||||| ||||||||||    
T  24443954 ataagcacttatcatataagttcttatgtataagcgatttctacaacaaaatataaaataaattcaaacaattttcatataagctataagttg 24444046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 386 - 469
Target Start/End: Complemental strand, 32920543 - 32920462
Alignment:
Q  386 tatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataagttg 469  Q
    ||||||| ||||||||||| ||||| ||||||| || |||  ||||||||||||||||||  |||| ||| || ||||||||||    
T  32920543 tatcatataagtgtttatggataagctatttttataacaa--gataaaataaagtcaaatcgttttaatagaagctataagttg 32920462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 377 - 465
Target Start/End: Complemental strand, 45128464 - 45128376
Alignment:
Q  377 ataagcgcttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataa 465  Q
    |||||| ||||||||| |||   ||||||||||  ||||| | || ||||||||||||| || |||||||||| |||||||| ||||||    
T  45128464 ataagcccttatcatataagaacttatgtataaactatttctataacaaaagataaaatcaaatcaaattattctcatataagctataa 45128376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 388 - 455
Target Start/End: Original strand, 7022595 - 7022662
Alignment:
Q  388 tcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcata 455  Q
    ||||| ||||| |||  |||||| ||||||| ||  ||||||||||||| ||||||||||||||||||    
T  7022595 tcatataagtgcttaattataagctatttttataagaaaagataaaatagagtcaaattattttcata 7022662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 423 - 478
Target Start/End: Original strand, 18630642 - 18630697
Alignment:
Q  423 caaaagataaaataaagtcaaattattttcatataacctataagttgcttacacaa 478  Q
    ||||||||||||||||||||| |  ||||||||||| |||||||||| || |||||    
T  18630642 caaaagataaaataaagtcaattggttttcatataagctataagttgttttcacaa 18630697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 385 - 416
Target Start/End: Original strand, 23819014 - 23819045
Alignment:
Q  385 ttatcatacaagtgtttatgtataagttattt 416  Q
    ||||||||||||||||||||||||||||||||    
T  23819014 ttatcatacaagtgtttatgtataagttattt 23819045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 382 - 469
Target Start/End: Complemental strand, 24160644 - 24160557
Alignment:
Q  382 cgcttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataagttg 469  Q
    ||||||||||| ||||| ||||  ||||| | ||| | || |||||||||| ||||| ||||| ||||||||| ||| ||||||||||    
T  24160644 cgcttatcatataagtgcttataaataagctttttctataacaaaagataatataaattcaaactattttcatgtaagctataagttg 24160557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 423 - 458
Target Start/End: Original strand, 32724081 - 32724116
Alignment:
Q  423 caaaagataaaataaagtcaaattattttcatataa 458  Q
    |||||||||||||||||||||| |||||||||||||    
T  32724081 caaaagataaaataaagtcaaactattttcatataa 32724116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 420 - 463
Target Start/End: Complemental strand, 44007983 - 44007940
Alignment:
Q  420 taccaaaagataaaataaagtcaaattattttcatataacctat 463  Q
    |||||||||||||||||||| |||||| ||||||||||| ||||    
T  44007983 taccaaaagataaaataaagacaaattgttttcatataagctat 44007940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 423 - 466
Target Start/End: Original strand, 46859892 - 46859935
Alignment:
Q  423 caaaagataaaataaagtcaaattattttcatataacctataag 466  Q
    ||||||||||||||||||||||| ||||||||| || |||||||    
T  46859892 caaaagataaaataaagtcaaatcattttcatacaatctataag 46859935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 400 - 466
Target Start/End: Original strand, 6364088 - 6364154
Alignment:
Q  400 ttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataag 466  Q
    ||||||||||| ||||| | || |||||||||||||||||| ||||| | |||| |||| |||||||    
T  6364088 ttatgtataagctatttctataacaaaagataaaataaagtgaaattctgttcacataagctataag 6364154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 383 - 440
Target Start/End: Complemental strand, 15511483 - 15511425
Alignment:
Q  383 gcttatcatacaagtgtttatgtataagttatttttgtaccaa-aagataaaataaagt 440  Q
    |||||||||  ||||| ||||||||||||||||||| || ||| |||||||||||||||    
T  15511483 gcttatcatgtaagtgcttatgtataagttatttttataacaagaagataaaataaagt 15511425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 378 - 443
Target Start/End: Original strand, 15969820 - 15969886
Alignment:
Q  378 taagcgcttatcatacaagtgtttatgtataagttatttttgt-accaaaagataaaataaagtcaa 443  Q
    |||||| ||||  |||||||||||||||||||||||||||| | | | ||||||||| |||||||||    
T  15969820 taagcgtttatagtacaagtgtttatgtataagttatttttataaacgaaagataaagtaaagtcaa 15969886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 399 - 465
Target Start/End: Complemental strand, 19040247 - 19040181
Alignment:
Q  399 tttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataa 465  Q
    |||||||||||| ||||| | ||  ||||||||||||||||||||| || ||||||| || ||||||    
T  19040247 tttatgtataagctatttctttagaaaaagataaaataaagtcaaaataatttcataaaagctataa 19040181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 378 - 416
Target Start/End: Complemental strand, 27321984 - 27321946
Alignment:
Q  378 taagcgcttatcatacaagtgtttatgtataagttattt 416  Q
    |||| |||||||||| |||||||||||||||||||||||    
T  27321984 taagggcttatcatataagtgtttatgtataagttattt 27321946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 394 - 468
Target Start/End: Complemental strand, 46013437 - 46013363
Alignment:
Q  394 aagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataagtt 468  Q
    |||||||||||| |||  ||||| || | |||||||||||||||||||||| | |||| ||||||  ||||||||    
T  46013437 aagtgtttatgtgtaaactatttctggaacaaaagataaaataaagtcaaactgtttttatataagttataagtt 46013363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 394 - 468
Target Start/End: Original strand, 46247151 - 46247225
Alignment:
Q  394 aagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataagtt 468  Q
    |||||||||||| |||  ||||| || | |||||||||||||||||||||| | |||| ||||||  ||||||||    
T  46247151 aagtgtttatgtgtaaactatttctggaacaaaagataaaataaagtcaaactgtttttatataaattataagtt 46247225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 423 - 469
Target Start/End: Complemental strand, 47119073 - 47119027
Alignment:
Q  423 caaaagataaaataaagtcaaattattttcatataacctataagttg 469  Q
    |||||||||||| ||||| ||||| ||||||||||| ||||||||||    
T  47119073 caaaagataaaacaaagttaaattgttttcatataagctataagttg 47119027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 430 - 468
Target Start/End: Complemental strand, 53192454 - 53192416
Alignment:
Q  430 taaaataaagtcaaattattttcatataacctataagtt 468  Q
    |||||||||||||||||||||||||| || |||||||||    
T  53192454 taaaataaagtcaaattattttcatagaatctataagtt 53192416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 377 - 458
Target Start/End: Original strand, 54414865 - 54414949
Alignment:
Q  377 ataagcgcttatcatacaagtgtttatgtataag---ttatttttgtaccaaaagataaaataaagtcaaattattttcatataa 458  Q
    |||||||||||||||| ||||| |||||||||||   |||||||| ||   ||||| |||||||||||||  ||||||| |||||    
T  54414865 ataagcgcttatcatataagtgcttatgtataagctattatttttataaagaaagagaaaataaagtcaatctattttcctataa 54414949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 429 - 463
Target Start/End: Complemental strand, 55437388 - 55437354
Alignment:
Q  429 ataaaataaagtcaaattattttcatataacctat 463  Q
    |||||||||||||||||||||||||||||| ||||    
T  55437388 ataaaataaagtcaaattattttcatataagctat 55437354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 432 - 465
Target Start/End: Original strand, 24091434 - 24091467
Alignment:
Q  432 aaataaagtcaaattattttcatataacctataa 465  Q
    ||||||||||||||||||||||||||| ||||||    
T  24091434 aaataaagtcaaattattttcatataagctataa 24091467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 400 - 469
Target Start/End: Original strand, 24160929 - 24160998
Alignment:
Q  400 ttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataagttg 469  Q
    ||||||||||| ||||| | || |||| |||||||| |||| ||||||||||||| ||  ||||||||||    
T  24160929 ttatgtataagctatttctataacaaaggataaaatcaagttaaattattttcatgtaggctataagttg 24160998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 384 - 469
Target Start/End: Original strand, 24929416 - 24929501
Alignment:
Q  384 cttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataagttg 469  Q
    ||||||||| || ||||| ||||| |  ||||| | || ||||||||||||||||||| || | |||||||| || ||||||||||    
T  24929416 cttatcatataattgtttttgtatgaactatttctataacaaaagataaaataaagtctaactgttttcataaaagctataagttg 24929501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 424 - 469
Target Start/End: Complemental strand, 25434567 - 25434522
Alignment:
Q  424 aaaagataaaataaagtcaaattattttcatataacctataagttg 469  Q
    ||||||||||||||||||||  | ||||||||||| ||||||||||    
T  25434567 aaaagataaaataaagtcaatatgttttcatataagctataagttg 25434522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 401 - 458
Target Start/End: Original strand, 49803151 - 49803208
Alignment:
Q  401 tatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataa 458  Q
    |||||||||||||||| | || ||||||||||||| |||| ||||| |||||| ||||    
T  49803151 tatgtataagttatttctatagcaaaagataaaatgaagttaaattgttttcacataa 49803208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 400 - 469
Target Start/End: Original strand, 50745939 - 50746008
Alignment:
Q  400 ttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataagttg 469  Q
    |||||| |||| ||||||| || |||||||||||||||| ||||| | |||| |||||| ||| ||||||    
T  50745939 ttatgtctaagctatttttataacaaaagataaaataaaatcaaactgtttttatataaactacaagttg 50746008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 404 - 466
Target Start/End: Original strand, 53626717 - 53626781
Alignment:
Q  404 gtataagttatttttgtac--caaaagataaaataaagtcaaattattttcatataacctataag 466  Q
    ||||||||||||||| ||   |||||||||||||||| ||||| | ||||||||||| |||||||    
T  53626717 gtataagttatttttctataacaaaagataaaataaattcaaaatgttttcatataagctataag 53626781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 423 - 463
Target Start/End: Complemental strand, 20936110 - 20936070
Alignment:
Q  423 caaaagataaaataaagtcaaattattttcatataacctat 463  Q
    |||||||||||||||||||||| ||||||||| ||| ||||    
T  20936110 caaaagataaaataaagtcaaactattttcatgtaagctat 20936070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 400 - 444
Target Start/End: Original strand, 21193937 - 21193981
Alignment:
Q  400 ttatgtataagttatttttgtaccaaaagataaaataaagtcaaa 444  Q
    ||||||||||| ||||||| ||  |||||||||||||||||||||    
T  21193937 ttatgtataagctatttttatagtaaaagataaaataaagtcaaa 21193981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 430 - 466
Target Start/End: Original strand, 21952930 - 21952966
Alignment:
Q  430 taaaataaagtcaaattattttcatataacctataag 466  Q
    ||||||||||||||||| ||||||||||| |||||||    
T  21952930 taaaataaagtcaaattgttttcatataagctataag 21952966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 396 - 444
Target Start/End: Original strand, 27968072 - 27968120
Alignment:
Q  396 gtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaa 444  Q
    |||||||| || ||||||||||| || |||| |||||||||||||||||    
T  27968072 gtgtttatataaaagttatttttataacaaatgataaaataaagtcaaa 27968120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 410 - 458
Target Start/End: Complemental strand, 29194524 - 29194476
Alignment:
Q  410 gttatttttgtaccaaaagataaaataaagtcaaattattttcatataa 458  Q
    |||||||| ||  |||||||||||||||| ||||| |||||||||||||    
T  29194524 gttattttcgtgacaaaagataaaataaaatcaaactattttcatataa 29194476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 389 - 465
Target Start/End: Complemental strand, 43372111 - 43372035
Alignment:
Q  389 catacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataa 465  Q
    |||| |||||||||   ||||| ||||||| || |||||||||||||| ||||||| | |||| |||||| ||||||    
T  43372111 catataagtgtttaaacataaggtatttttataacaaaagataaaatacagtcaaactgtttttatataagctataa 43372035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 413 - 469
Target Start/End: Complemental strand, 55870459 - 55870403
Alignment:
Q  413 atttttgtaccaaaagataaaataaagtcaaattattttcatataacctataagttg 469  Q
    |||||| || |||||||| ||||||||||||| | |||||| |||| ||||||||||    
T  55870459 atttttataacaaaagatcaaataaagtcaaactgttttcacataagctataagttg 55870403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 57; Significance: 2e-23; HSPs: 49)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 385 - 457
Target Start/End: Complemental strand, 41620437 - 41620365
Alignment:
Q  385 ttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatata 457  Q
    |||||||||||||| |||| ||||||||||||||||| |||||||||||||||||||||||||| ||||||||    
T  41620437 ttatcatacaagtgcttatatataagttatttttgtaacaaaagataaaataaagtcaaattatgttcatata 41620365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 345 - 458
Target Start/End: Original strand, 2699192 - 2699303
Alignment:
Q  345 acttgggccctgtttggaccaacatcttaaaaataagcgcttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaa 444  Q
    ||||||||||||||||||| |||||| |||   ||||||| ||||||| | |||| ||| |||||||||||| |  | ||||| |||||||||||| |||    
T  2699192 acttgggccctgtttggacaaacatcataat--taagcgcctatcatatacgtgtctatatataagttatttctacaacaaaatataaaataaagttaaa 2699289  T
Q  445 ttattttcatataa 458  Q
     |||||||||||||    
T  2699290 ctattttcatataa 2699303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 380 - 469
Target Start/End: Original strand, 38561645 - 38561734
Alignment:
Q  380 agcgcttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataagttg 469  Q
    ||||||||| ||| |||||| ||| |||||||||||| | || |||||||||||||||||||||| |||||| || ||  ||||||||||    
T  38561645 agcgcttattatataagtgtctatatataagttatttatataacaaaagataaaataaagtcaaactatttttatctatactataagttg 38561734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 394 - 466
Target Start/End: Original strand, 4558731 - 4558803
Alignment:
Q  394 aagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataag 466  Q
    ||||||||||||||||| ||||| | ||  ||||||||||||||||| ||||||||||||||||  |||||||    
T  4558731 aagtgtttatgtataagctatttctataataaaagataaaataaagttaaattattttcatatatgctataag 4558803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 377 - 465
Target Start/End: Original strand, 31884510 - 31884598
Alignment:
Q  377 ataagcgcttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataa 465  Q
    ||||||||||||||||||||||  |||||||||||||||| | || ||||| ||||||| || |  |||| ||||||||||| ||||||    
T  31884510 ataagcgcttatcatacaagtgcatatgtataagttatttctataacaaaatataaaatcaaattgaattgttttcatataagctataa 31884598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 385 - 458
Target Start/End: Original strand, 38874570 - 38874643
Alignment:
Q  385 ttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataa 458  Q
    ||||| || ||||||||||||||||||| ||| |||| | |||||||||||  ||||||||| |||||||||||    
T  38874570 ttatcgtataagtgtttatgtataagttgtttctgtaactaaagataaaatcgagtcaaattcttttcatataa 38874643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 383 - 444
Target Start/End: Complemental strand, 40728566 - 40728505
Alignment:
Q  383 gcttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaa 444  Q
    |||||||||| ||||||| ||| ||||||||||| | || ||||||||||||||||||||||    
T  40728566 gcttatcatataagtgttcatgcataagttatttctataacaaaagataaaataaagtcaaa 40728505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 402 - 466
Target Start/End: Complemental strand, 1470985 - 1470921
Alignment:
Q  402 atgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataag 466  Q
    ||||||||| ||||| | ||  |||||||||||||||||||||||| |||||||||| |||||||    
T  1470985 atgtataagctatttctataataaaagataaaataaagtcaaattactttcatataagctataag 1470921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 383 - 463
Target Start/End: Original strand, 11494075 - 11494155
Alignment:
Q  383 gcttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctat 463  Q
    |||||||||| ||||| || |||||| ||||||||  || |||||||||| ||||||||||| | ||||||||||| ||||    
T  11494075 gcttatcatataagtgcttttgtatatgttattttcataacaaaagataacataaagtcaaacttttttcatataaactat 11494155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 383 - 451
Target Start/End: Original strand, 14482124 - 14482192
Alignment:
Q  383 gcttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattatttt 451  Q
    |||||||||| ||||| ||||||||||  ||||| | || |||||||||||||||||||||||| ||||    
T  14482124 gcttatcatataagtgcttatgtataaactatttctataacaaaagataaaataaagtcaaattgtttt 14482192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 377 - 465
Target Start/End: Complemental strand, 34788581 - 34788493
Alignment:
Q  377 ataagcgcttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataa 465  Q
    |||||||||||||||| || || ||| ||||||| ||||||| |  | |||||||||||||||||||| | ||| ||||||| ||||||    
T  34788581 ataagcgcttatcatataaatgcttacgtataagctatttttatgaccaaagataaaataaagtcaaactgtttccatataagctataa 34788493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 383 - 455
Target Start/End: Original strand, 40357821 - 40357893
Alignment:
Q  383 gcttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcata 455  Q
    |||||||||| |||| |||||||||||| | ||  | || |||||||||||||||||| ||||||||||||||    
T  40357821 gcttatcatataagtatttatgtataagctcttgatataacaaaagataaaataaagtaaaattattttcata 40357893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 383 - 458
Target Start/End: Complemental strand, 29056139 - 29056064
Alignment:
Q  383 gcttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataa 458  Q
    |||| ||| ||||||||||||||||||| || || |  | ||||||||||||||||||||| || |||||||||||    
T  29056139 gcttgtcaaacaagtgtttatgtataagctacttctagagcaaaagataaaataaagtcaatttgttttcatataa 29056064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 380 - 455
Target Start/End: Complemental strand, 40280356 - 40280281
Alignment:
Q  380 agcgcttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcata 455  Q
    ||||||||||||| |||||  ||| |||||||||||| |  | |||||||||||||||||| ||||| ||||||||    
T  40280356 agcgcttatcatataagtgcctatatataagttatttctacaacaaaagataaaataaagtaaaattgttttcata 40280281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 404 - 466
Target Start/End: Original strand, 26820142 - 26820204
Alignment:
Q  404 gtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataag 466  Q
    ||||||||||||| | || |||||||||||||||||||||| ||||||  ||||| |||||||    
T  26820142 gtataagttatttctataacaaaagataaaataaagtcaaactattttgttataaactataag 26820204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 423 - 469
Target Start/End: Original strand, 34770854 - 34770900
Alignment:
Q  423 caaaagataaaataaagtcaaattattttcatataacctataagttg 469  Q
    |||||||||||||||||||||||| ||||||| ||| ||||||||||    
T  34770854 caaaagataaaataaagtcaaattgttttcatttaagctataagttg 34770900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 385 - 446
Target Start/End: Complemental strand, 2364619 - 2364558
Alignment:
Q  385 ttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaatt 446  Q
    |||||||| || | |||||||||| | ||||||| || ||||||||||||||||||||||||    
T  2364619 ttatcatataactatttatgtatacgctatttttatagcaaaagataaaataaagtcaaatt 2364558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 385 - 458
Target Start/End: Original strand, 7026655 - 7026728
Alignment:
Q  385 ttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataa 458  Q
    |||||||| ||||| ||||| ||||| || | || || |||||||||||||||||| ||||| |||||||||||    
T  7026655 ttatcatataagtgcttatgcataagctactgttataacaaaagataaaataaagtaaaattgttttcatataa 7026728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 385 - 469
Target Start/End: Complemental strand, 35298624 - 35298539
Alignment:
Q  385 ttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttc-atataacctataagttg 469  Q
    |||||||| ||||| ||||||||||| |||||  ||| ||||||||||||||||| ||||   ||||| |||||| ||||||||||    
T  35298624 ttatcatataagtgcttatgtataagctatttcagtaacaaaagataaaataaagccaaacagttttcaatataaactataagttg 35298539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 377 - 458
Target Start/End: Complemental strand, 41336799 - 41336718
Alignment:
Q  377 ataagcgcttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataa 458  Q
    ||||||| |||||| | || || |||||||||| | |||||| |  |||||||||||||| ||||||||| |||||||||||    
T  41336799 ataagcgtttatcaaataaatgcttatgtataaatcatttttatgacaaaagataaaatatagtcaaattgttttcatataa 41336718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 400 - 469
Target Start/End: Original strand, 42597340 - 42597409
Alignment:
Q  400 ttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataagttg 469  Q
    ||||||||||| ||||| | || |||||||||||||||||| ||||| |||||||  || ||||||||||    
T  42597340 ttatgtataagctatttctataacaaaagataaaataaagtaaaattgttttcatgcaagctataagttg 42597409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 377 - 469
Target Start/End: Complemental strand, 11056821 - 11056729
Alignment:
Q  377 ataagcgcttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataagttg 469  Q
    |||||| ||||||||| ||||||| ||| || || ||||| | || ||||||  ||||||||||  || ||||||||||||| ||||||||||    
T  11056821 ataagctcttatcatataagtgttcatgcatgagctatttctataacaaaaggaaaaataaagttgaactattttcatataagctataagttg 11056729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 400 - 456
Target Start/End: Complemental strand, 12225030 - 12224974
Alignment:
Q  400 ttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatat 456  Q
    ||||||||||||||||| |    |||||||||||||||||||||| |||||||||||    
T  12225030 ttatgtataagttatttctaagacaaaagataaaataaagtcaaactattttcatat 12224974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 426 - 458
Target Start/End: Complemental strand, 29262979 - 29262947
Alignment:
Q  426 aagataaaataaagtcaaattattttcatataa 458  Q
    |||||||||||||||||||||||||||||||||    
T  29262979 aagataaaataaagtcaaattattttcatataa 29262947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 377 - 469
Target Start/End: Original strand, 35869753 - 35869845
Alignment:
Q  377 ataagcgcttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataagttg 469  Q
    |||||| ||||||||| ||||  |||||||||||  |||| |  | ||||| |||||||||| |||||  |||||||||||| ||||||||||    
T  35869753 ataagcacttatcatataagttcttatgtataagcgatttctacaacaaaatataaaataaattcaaacaattttcatataagctataagttg 35869845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 423 - 458
Target Start/End: Original strand, 2100767 - 2100802
Alignment:
Q  423 caaaagataaaataaagtcaaattattttcatataa 458  Q
    |||||||||||||||||||||| |||||||||||||    
T  2100767 caaaagataaaataaagtcaaaatattttcatataa 2100802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 385 - 444
Target Start/End: Original strand, 29699178 - 29699237
Alignment:
Q  385 ttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaa 444  Q
    |||||||| || || ||||||| ||||||||| | || ||||||||||||||||||||||    
T  29699178 ttatcatataaatgcttatgtacaagttatttctataacaaaagataaaataaagtcaaa 29699237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 394 - 469
Target Start/End: Original strand, 29973014 - 29973089
Alignment:
Q  394 aagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataagttg 469  Q
    ||||| |||| |||||| ||||| | || || ||| ||||||||||||||| |||||||| |||| ||||||||||    
T  29973014 aagtgcttatatataagctatttctttaacacaaggtaaaataaagtcaaactattttcacataagctataagttg 29973089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 377 - 444
Target Start/End: Complemental strand, 39392815 - 39392748
Alignment:
Q  377 ataagcgcttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaa 444  Q
    ||||| |||||||||| |||||  |||||||||  ||||| | || ||||||||||||||||||||||    
T  39392815 ataagtgcttatcatataagtggctatgtataaactatttctataacaaaagataaaataaagtcaaa 39392748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 414 - 465
Target Start/End: Complemental strand, 42237539 - 42237488
Alignment:
Q  414 tttttgtaccaaaagataaaataaagtcaaattattttcatataacctataa 465  Q
    ||||| || |||||||||||||||||| ||||| ||||||||||| ||||||    
T  42237539 tttttataacaaaagataaaataaagttaaattgttttcatataagctataa 42237488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 423 - 469
Target Start/End: Complemental strand, 3537139 - 3537093
Alignment:
Q  423 caaaagataaaataaagtcaaattattttcatataacctataagttg 469  Q
    |||||||||||||||||||||||| ||||| ||||| ||||| ||||    
T  3537139 caaaagataaaataaagtcaaattgttttcgtataagctataggttg 3537093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 394 - 468
Target Start/End: Original strand, 3945207 - 3945281
Alignment:
Q  394 aagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataagtt 468  Q
    |||||||||| ||||||||||||   || |||||||||||||||| | ||  |||||| |||||| |||||||||    
T  3945207 aagtgtttatatataagttatttcaataacaaaagataaaataaaatgaagctatttttatataagctataagtt 3945281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 400 - 466
Target Start/End: Original strand, 12361131 - 12361197
Alignment:
Q  400 ttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataag 466  Q
    |||| |||||||||||| | ||   ||||||||||| |||||||||| ||||||||||| |||||||    
T  12361131 ttatatataagttatttctataaataaagataaaatgaagtcaaattgttttcatataagctataag 12361197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 385 - 455
Target Start/End: Original strand, 14949812 - 14949882
Alignment:
Q  385 ttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcata 455  Q
    |||||||||||||  ||||||||||| || || | || |||||||||||||| ||||||| | ||||||||    
T  14949812 ttatcatacaagttcttatgtataagctacttctataacaaaagataaaatagagtcaaactcttttcata 14949882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 400 - 458
Target Start/End: Original strand, 26215435 - 26215493
Alignment:
Q  400 ttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataa 458  Q
    ||||||||||| ||||| | || |||||||||||||||||| ||| ||||||| |||||    
T  26215435 ttatgtataagctatttctataacaaaagataaaataaagttaaactattttcgtataa 26215493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 424 - 458
Target Start/End: Complemental strand, 27728128 - 27728094
Alignment:
Q  424 aaaagataaaataaagtcaaattattttcatataa 458  Q
    ||||||||||||||||||||| |||||||||||||    
T  27728128 aaaagataaaataaagtcaaactattttcatataa 27728094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 385 - 451
Target Start/End: Complemental strand, 31315598 - 31315533
Alignment:
Q  385 ttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattatttt 451  Q
    |||||||| |||||||  |||||||| ||||||| ||  ||||||||||||||||||||| ||||||    
T  31315598 ttatcata-aagtgttagtgtataagctatttttataataaaagataaaataaagtcaaactatttt 31315533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 385 - 455
Target Start/End: Original strand, 34563174 - 34563244
Alignment:
Q  385 ttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcata 455  Q
    |||||||| ||||| |||| |||||||||||| | |  |||| |||||||||||||||||  |||||||||    
T  34563174 ttatcatataagtgcttatatataagttatttctatgacaaaggataaaataaagtcaaacaattttcata 34563244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 393 - 466
Target Start/End: Original strand, 1112785 - 1112858
Alignment:
Q  393 caagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataag 466  Q
    |||||| ||||||||| | ||||| | || ||||||||||||||| || ||||| |||||| |||| |||||||    
T  1112785 caagtgcttatgtatatgctatttctataacaaaagataaaataaggttaaattgttttcacataagctataag 1112858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 377 - 466
Target Start/End: Complemental strand, 28769493 - 28769404
Alignment:
Q  377 ataagcgcttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataag 466  Q
    ||||| |||||||||| || || ||||||||||| ||||  | || ||||  ||||||| |||||||| ||||||| ||||| |||||||    
T  28769493 ataagtgcttatcatataaatgcttatgtataagctattcctataacaaactataaaattaagtcaaactattttcttataagctataag 28769404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 402 - 466
Target Start/End: Original strand, 31705025 - 31705090
Alignment:
Q  402 atgtataagttatttttgtaccaaaagataaaataaagtcaaatta-ttttcatataacctataag 466  Q
    ||||||||| ||||| ||||| |||||||||||| | |||||||||  |||||||||| |||||||    
T  31705025 atgtataagctatttctgtactaaaagataaaatcatgtcaaattacgtttcatataagctataag 31705090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 385 - 466
Target Start/End: Complemental strand, 33209366 - 33209285
Alignment:
Q  385 ttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataag 466  Q
    ||||||||||||||| |||  ||||| ||||| | ||   ||||||||||||||||| || | ||||||||||| |||||||    
T  33209366 ttatcatacaagtgtctataaataagctatttctataatgaaagataaaataaagtcgaactgttttcatataaactataag 33209285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 385 - 465
Target Start/End: Complemental strand, 787252 - 787172
Alignment:
Q  385 ttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataa 465  Q
    |||||||  ||||| |||||| |||| | |||  ||| || ||||||||||||||||||||| || |||||||| ||||||    
T  787252 ttatcatctaagtgcttatgtttaagctgtttccgtaacataagataaaataaagtcaaattgttatcatataagctataa 787172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 378 - 458
Target Start/End: Original strand, 4510945 - 4511025
Alignment:
Q  378 taagcgcttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataa 458  Q
    |||||||||||||| ||| || |||| |||||| ||||||   | |||||||| ||| ||||||||||| || ||||||||    
T  4510945 taagcgcttatcatgcaattgcttatttataagctattttgtaaacaaaagattaaaaaaagtcaaatttttctcatataa 4511025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 430 - 466
Target Start/End: Complemental strand, 7878587 - 7878551
Alignment:
Q  430 taaaataaagtcaaattattttcatataacctataag 466  Q
    ||||||||||||||||| ||||||||||| |||||||    
T  7878587 taaaataaagtcaaattgttttcatataagctataag 7878551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 396 - 440
Target Start/End: Complemental strand, 10062262 - 10062218
Alignment:
Q  396 gtgtttatgtataagttatttttgtaccaaaagataaaataaagt 440  Q
    ||||||||||||||||||||| | |||||||||| || |||||||    
T  10062262 gtgtttatgtataagttatttctataccaaaagaaaagataaagt 10062218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 379 - 439
Target Start/End: Original strand, 10939325 - 10939385
Alignment:
Q  379 aagcgcttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaag 439  Q
    |||| ||||| |||| | |||||||||||||||||||| | |  |||||||||||||||||    
T  10939325 aagcacttattatactactgtttatgtataagttatttctattacaaaagataaaataaag 10939385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 428 - 472
Target Start/End: Original strand, 11376670 - 11376714
Alignment:
Q  428 gataaaataaagtcaaattattttcatataacctataagttgctt 472  Q
    |||||||||||||| ||||||||| |||||| ||||||| |||||    
T  11376670 gataaaataaagtctaattattttgatataagctataagatgctt 11376714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 425 - 465
Target Start/End: Complemental strand, 35374479 - 35374439
Alignment:
Q  425 aaagataaaataaagtcaaattattttcatataacctataa 465  Q
    |||||||||||||||| ||||| ||||||||||| ||||||    
T  35374479 aaagataaaataaagttaaattgttttcatataagctataa 35374439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 56; Significance: 7e-23; HSPs: 55)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 377 - 468
Target Start/End: Complemental strand, 35135816 - 35135725
Alignment:
Q  377 ataagcgcttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataagtt 468  Q
    ||||| ||||| |||| ||||||||||||||||| ||||| | || |||||||||||||||||||||| ||||||||||||| |||||||||    
T  35135816 ataagtgcttaacatataagtgtttatgtataagatatttctataacaaaagataaaataaagtcaaactattttcatataagctataagtt 35135725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 377 - 458
Target Start/End: Complemental strand, 4991097 - 4991016
Alignment:
Q  377 ataagcgcttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataa 458  Q
    ||||||| |||||||| |||||||| |||||||| ||||||| || |||||||||| ||||  |||| ||||||||||||||    
T  4991097 ataagcgattatcatataagtgtttgtgtataagctatttttataacaaaagataacataagatcaatttattttcatataa 4991016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 384 - 469
Target Start/End: Original strand, 36539669 - 36539754
Alignment:
Q  384 cttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataagttg 469  Q
    ||||||||| ||||| |||||| |||| ||||| | || |||||||||||||||||||||  | ||||||||||| ||||||||||    
T  36539669 cttatcatataagtgcttatgtgtaagctatttgtttatcaaaagataaaataaagtcaacctgttttcatataagctataagttg 36539754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 387 - 455
Target Start/End: Complemental strand, 7096271 - 7096203
Alignment:
Q  387 atcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcata 455  Q
    |||||||||||| ||||||||||| ||||| | || ||||||||||||||||||||||  |||||||||    
T  7096271 atcatacaagtgcttatgtataagctatttctataacaaaagataaaataaagtcaaaccattttcata 7096203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 377 - 469
Target Start/End: Original strand, 9927501 - 9927593
Alignment:
Q  377 ataagcgcttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataagttg 469  Q
    |||||| |||||||   ||||||||||||||||||||||| | ||  |||||||||||| | |||||||| ||||||||||| | ||||||||    
T  9927501 ataagcacttatcaagtaagtgtttatgtataagttatttgtatagtaaaagataaaattacgtcaaattgttttcatataagcgataagttg 9927593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 384 - 466
Target Start/End: Complemental strand, 32059735 - 32059654
Alignment:
Q  384 cttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataag 466  Q
    ||||||||| ||||| ||||||||||| | |||||||| | || ||||||||||||||||| | ||||||||||| |||||||    
T  32059735 cttatcatataagtgcttatgtataagctgtttttgtaactaa-gataaaataaagtcaaactgttttcatataagctataag 32059654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 378 - 443
Target Start/End: Complemental strand, 5284827 - 5284762
Alignment:
Q  378 taagcgcttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaa 443  Q
    |||||||||||  | || ||||||||||||| | |||||||||| |||||||||||||||||||||    
T  5284827 taagcgcttattgtgcacgtgtttatgtatatgctatttttgtaacaaaagataaaataaagtcaa 5284762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 378 - 463
Target Start/End: Complemental strand, 29117083 - 29116998
Alignment:
Q  378 taagcgcttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctat 463  Q
    ||||||||||||||| |  || ||||||||| ||||||| | || |||||||||||||||||||||| | ||||| ||||| ||||    
T  29117083 taagcgcttatcatatagctgattatgtatatgttatttctataacaaaagataaaataaagtcaaactgttttcgtataagctat 29116998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 377 - 466
Target Start/End: Original strand, 32172569 - 32172658
Alignment:
Q  377 ataagcgcttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataag 466  Q
    |||||||||||||||||||| | ||||||||||  ||||| |  | ||||||||||||| ||||||| || ||| ||||||| |||||||    
T  32172569 ataagcgcttatcatacaagagcttatgtataaactatttctacaacaaaagataaaatgaagtcaagttgtttacatataagctataag 32172658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 400 - 457
Target Start/End: Complemental strand, 38047986 - 38047929
Alignment:
Q  400 ttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatata 457  Q
    ||||||||||| ||| | | || |||||||||||||||||||||||||||||||||||    
T  38047986 ttatgtataagctatatctctaacaaaagataaaataaagtcaaattattttcatata 38047929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 378 - 469
Target Start/End: Complemental strand, 912802 - 912710
Alignment:
Q  378 taagcgcttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtc-aaattattttcatataacctataagttg 469  Q
    |||| |||||||||| ||| ||||||| ||||||||||| | || || || ||||||||||||| ||||| ||||||||||| | ||||||||    
T  912802 taagtgcttatcatataagcgtttatgaataagttatttctataacacaatataaaataaagtcaaaattgttttcatataagcaataagttg 912710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 394 - 458
Target Start/End: Complemental strand, 9202885 - 9202821
Alignment:
Q  394 aagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataa 458  Q
    ||||| |||| |||||| ||||| |||| |||||||||||||||||| ||||| |||||||||||    
T  9202885 aagtgcttatatataagctatttctgtagcaaaagataaaataaagttaaattgttttcatataa 9202821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 378 - 478
Target Start/End: Complemental strand, 42181245 - 42181145
Alignment:
Q  378 taagcgcttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataagttgcttacaca 477  Q
    ||||||||||||| | ||||  | |||| | || ||||||| || |||||||||||| ||||||||||  ||||||||||| |||||||||| || ||||    
T  42181245 taagcgcttatcacataagtaataatgtgtcagctatttttataacaaaagataaaacaaagtcaaatggttttcatataagctataagttgtttgcaca 42181146  T
Q  478 a 478  Q
    |    
T  42181145 a 42181145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 395 - 472
Target Start/End: Complemental strand, 34117669 - 34117595
Alignment:
Q  395 agtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataagttgctt 472  Q
    |||| ||||||||||||||||| | || ||||||||||||||| ||   ||||||| ||||||| |||||||||||||    
T  34117669 agtgcttatgtataagttatttctttaacaaaagataaaataaggt---attatttacatataagctataagttgctt 34117595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 383 - 458
Target Start/End: Complemental strand, 37063222 - 37063147
Alignment:
Q  383 gcttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataa 458  Q
    |||| ||||| || || ||||||||||  ||||| | || |||||||||||||||||||||| |||||||||||||    
T  37063222 gcttgtcatataaatgcttatgtataaactatttctataacaaaagataaaataaagtcaaactattttcatataa 37063147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 378 - 440
Target Start/End: Complemental strand, 12407813 - 12407752
Alignment:
Q  378 taagcgcttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagt 440  Q
    ||||| ||||||||||||||||| ||||||||| ||||| | || ||||||||||||||||||    
T  12407813 taagctcttatcatacaagtgtt-atgtataagctatttctataacaaaagataaaataaagt 12407752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 387 - 469
Target Start/End: Complemental strand, 18704179 - 18704098
Alignment:
Q  387 atcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataagttg 469  Q
    |||||| ||||  ||||||||||||||||| | || |||||||| ||||||||||||  |||||| |||||| ||||||||||    
T  18704179 atcatataagttcttatgtataagttatttctataacaaaagat-aaataaagtcaagctatttttatataagctataagttg 18704098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 377 - 443
Target Start/End: Complemental strand, 20982289 - 20982223
Alignment:
Q  377 ataagcgcttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaa 443  Q
    ||||| |||||||||| ||||| ||||||||||| ||||| | || |||| ||||||||||||||||    
T  20982289 ataagtgcttatcatataagtgcttatgtataagctatttctataacaaaggataaaataaagtcaa 20982223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 376 - 454
Target Start/End: Complemental strand, 38766998 - 38766920
Alignment:
Q  376 aataagcgcttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcat 454  Q
    ||||||||||||| ||| ||||||| ||| || |||||||| | || |||||| ||||||||||| ||| |||||||||    
T  38766998 aataagcgcttatgatataagtgttaatggatgagttatttctataacaaaagctaaaataaagttaaactattttcat 38766920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 385 - 458
Target Start/End: Complemental strand, 6734038 - 6733966
Alignment:
Q  385 ttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataa 458  Q
    |||||||| ||||||||||| ||||  ||||||| || | |||||||||||||||| ||||| |||||||||||    
T  6734038 ttatcatataagtgtttatgcataatctatttttataacgaaagataaaataaagt-aaattgttttcatataa 6733966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 377 - 438
Target Start/End: Original strand, 26516214 - 26516275
Alignment:
Q  377 ataagcgcttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaa 438  Q
    |||||||||||||||| ||||| ||||||||||| ||||| |  | ||||||||||||||||    
T  26516214 ataagcgcttatcatataagtgcttatgtataagctatttctaaaacaaaagataaaataaa 26516275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 401 - 466
Target Start/End: Complemental strand, 36796836 - 36796771
Alignment:
Q  401 tatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataag 466  Q
    |||||||||||||||| || | ||||| ||||||||| || |||||||||||| |||| |||||||    
T  36796836 tatgtataagttatttctgcaacaaaaaataaaataaggttaaattattttcacataagctataag 36796771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 377 - 469
Target Start/End: Complemental strand, 39823276 - 39823183
Alignment:
Q  377 ataagcgcttatcatacaagtgtttatgtataag-ttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataagttg 469  Q
    |||||||||| | ||| ||| | |||||||| || |||||| | || |||||||||||||||||||||| || |||||||||| ||| ||||||    
T  39823276 ataagcgcttgttatagaagggcttatgtatcagattatttatataacaaaagataaaataaagtcaaactactttcatataagctacaagttg 39823183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 394 - 466
Target Start/End: Original strand, 10907312 - 10907384
Alignment:
Q  394 aagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataag 466  Q
    ||||||||||||||||||||||| | || | || | ||||||||| ||||| || |||||||||| |||||||    
T  10907312 aagtgtttatgtataagttatttctatagctaatggtaaaataaaatcaaactactttcatataatctataag 10907384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 377 - 452
Target Start/End: Original strand, 11835192 - 11835268
Alignment:
Q  377 ataagcgcttatcat-acaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttc 452  Q
    |||| |||||||||| | ||||||||||||||||   |||||| || |||||||||||||||||| ||||| |||||    
T  11835192 ataaacgcttatcatgataagtgtttatgtataaaccatttttataacaaaagataaaataaagttaaattgttttc 11835268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 423 - 463
Target Start/End: Complemental strand, 32969225 - 32969185
Alignment:
Q  423 caaaagataaaataaagtcaaattattttcatataacctat 463  Q
    ||||||||||||||||||||||||||||| |||||| ||||    
T  32969225 caaaagataaaataaagtcaaattatttttatataagctat 32969185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 378 - 446
Target Start/End: Complemental strand, 35095936 - 35095868
Alignment:
Q  378 taagcgcttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaatt 446  Q
    ||||||||||||||| ||||| |||| | |||  ||||| | || ||||||||||||||||||||||||    
T  35095936 taagcgcttatcatataagtgcttatatttaaactatttctataacaaaagataaaataaagtcaaatt 35095868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 385 - 469
Target Start/End: Original strand, 35960338 - 35960421
Alignment:
Q  385 ttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataagttg 469  Q
    |||||||| |||| |||||| ||||  ||||| | ||  ||||||||||||||||||||| || |||||||||| ||||||||||    
T  35960338 ttatcatataagtatttatgcataaactatttctataataaaagataaaataaagtcaaacta-tttcatataaactataagttg 35960421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 397 - 444
Target Start/End: Complemental strand, 1636891 - 1636844
Alignment:
Q  397 tgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaa 444  Q
    |||||||| ||||||||||| |||| || |||||||||||||||||||    
T  1636891 tgtttatgaataagttatttctgtatcacaagataaaataaagtcaaa 1636844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 377 - 444
Target Start/End: Original strand, 6739788 - 6739855
Alignment:
Q  377 ataagcgcttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaa 444  Q
    ||||||| |||||||| ||| |||||||||||||| |||| | ||   ||||||||||||||||||||    
T  6739788 ataagcgtttatcatataagcgtttatgtataagtcatttctataaataaagataaaataaagtcaaa 6739855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 423 - 458
Target Start/End: Complemental strand, 8158409 - 8158374
Alignment:
Q  423 caaaagataaaataaagtcaaattattttcatataa 458  Q
    |||||||||||||||||| |||||||||||||||||    
T  8158409 caaaagataaaataaagttaaattattttcatataa 8158374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 406 - 469
Target Start/End: Complemental strand, 9703365 - 9703302
Alignment:
Q  406 ataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataagttg 469  Q
    ||||||||||| |||| ||| |||||||||||||||||| |  |||||||||| ||| ||||||    
T  9703365 ataagttatttctgtaacaagagataaaataaagtcaaactcatttcatataagctacaagttg 9703302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 423 - 462
Target Start/End: Original strand, 10303763 - 10303802
Alignment:
Q  423 caaaagataaaataaagtcaaattattttcatataaccta 462  Q
    |||||||||||||||||||||||| ||||||| |||||||    
T  10303763 caaaagataaaataaagtcaaattgttttcatttaaccta 10303802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 423 - 466
Target Start/End: Original strand, 14295468 - 14295511
Alignment:
Q  423 caaaagataaaataaagtcaaattattttcatataacctataag 466  Q
    |||||||||||||||||||||| | ||||||||||| |||||||    
T  14295468 caaaagataaaataaagtcaaactgttttcatataagctataag 14295511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 385 - 452
Target Start/End: Complemental strand, 17756875 - 17756808
Alignment:
Q  385 ttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttc 452  Q
    |||||||| ||||| |||||||| |||| ||| | || || ||||||||||||||||||||| |||||    
T  17756875 ttatcatataagtgcttatgtatgagttgtttctttaacagaagataaaataaagtcaaattgttttc 17756808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 423 - 466
Target Start/End: Original strand, 35550911 - 35550953
Alignment:
Q  423 caaaagataaaataaagtcaaattattttcatataacctataag 466  Q
    ||||||||||||||||||| |||||||||||||||| |||||||    
T  35550911 caaaagataaaataaagtc-aattattttcatataaactataag 35550953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 423 - 458
Target Start/End: Original strand, 39750105 - 39750140
Alignment:
Q  423 caaaagataaaataaagtcaaattattttcatataa 458  Q
    |||||||||||||||||||||| |||||||||||||    
T  39750105 caaaagataaaataaagtcaaactattttcatataa 39750140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 426 - 468
Target Start/End: Complemental strand, 583878 - 583836
Alignment:
Q  426 aagataaaataaagtcaaattattttcatataacctataagtt 468  Q
    ||||||||||||||||||| | ||||||||||| |||||||||    
T  583878 aagataaaataaagtcaaactgttttcatataagctataagtt 583836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 424 - 469
Target Start/End: Original strand, 3952061 - 3952104
Alignment:
Q  424 aaaagataaaataaagtcaaattattttcatataacctataagttg 469  Q
    |||||||||||||||| ||||||  |||||||||||||||||||||    
T  3952061 aaaagataaaataaagacaaatt--tttcatataacctataagttg 3952104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 383 - 433
Target Start/End: Original strand, 38033890 - 38033940
Alignment:
Q  383 gcttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaa 433  Q
    |||||||| | ||||||||||||||||||||||| | || |||||||||||    
T  38033890 gcttatcaaataagtgtttatgtataagttatttatataacaaaagataaa 38033940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 394 - 452
Target Start/End: Complemental strand, 40048417 - 40048359
Alignment:
Q  394 aagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttc 452  Q
    ||||| ||||||||||||| ||| | || |||||||||||||||||| | |||||||||    
T  40048417 aagtgcttatgtataagttgtttctataacaaaagataaaataaagttatattattttc 40048359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 400 - 469
Target Start/End: Original strand, 4855637 - 4855706
Alignment:
Q  400 ttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataagttg 469  Q
    |||||||| || ||||||| || ||||| |||||||||||| ||||| || ||||||||  |||||||||    
T  4855637 ttatgtattagctatttttataacaaaaaataaaataaagttaaattgttatcatataagttataagttg 4855706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 424 - 469
Target Start/End: Complemental strand, 10272538 - 10272493
Alignment:
Q  424 aaaagataaaataaagtcaaattattttcatataacctataagttg 469  Q
    |||||||||||| |||||||||| ||||| ||||| ||||||||||    
T  10272538 aaaagataaaattaagtcaaattgttttcgtataagctataagttg 10272493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 384 - 437
Target Start/End: Original strand, 10391276 - 10391329
Alignment:
Q  384 cttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataa 437  Q
    ||||||||| ||||| ||| ||||||| ||||||| || |||||||||||||||    
T  10391276 cttatcatataagtgcttacgtataagctatttttataacaaaagataaaataa 10391329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 405 - 446
Target Start/End: Original strand, 11615452 - 11615493
Alignment:
Q  405 tataagttatttttgtaccaaaagataaaataaagtcaaatt 446  Q
    |||||| ||||||| || ||||||||||||||||||||||||    
T  11615452 tataagctatttttataacaaaagataaaataaagtcaaatt 11615493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 385 - 438
Target Start/End: Original strand, 13224353 - 13224406
Alignment:
Q  385 ttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaa 438  Q
    |||||||| ||||| ||||||||||| ||||| | || ||||||||||||||||    
T  13224353 ttatcatagaagtgcttatgtataagctatttctataacaaaagataaaataaa 13224406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 394 - 451
Target Start/End: Original strand, 14932223 - 14932280
Alignment:
Q  394 aagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattatttt 451  Q
    ||||||| ||||||||  ||||||| || |||||||||||||||||| ||||| ||||    
T  14932223 aagtgttcatgtataatctatttttatagcaaaagataaaataaagttaaattgtttt 14932280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 428 - 469
Target Start/End: Original strand, 34205206 - 34205247
Alignment:
Q  428 gataaaataaagtcaaattattttcatataacctataagttg 469  Q
    |||||| ||||||||||||||||| |||||| ||||||||||    
T  34205206 gataaagtaaagtcaaattatttttatataagctataagttg 34205247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 400 - 465
Target Start/End: Original strand, 39128578 - 39128643
Alignment:
Q  400 ttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataa 465  Q
    ||||||||||| || || | || |||||||||||||||||||||||| || ||| |||| ||||||    
T  39128578 ttatgtataagctaattctataacaaaagataaaataaagtcaaattgttctcaaataaactataa 39128643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 423 - 463
Target Start/End: Complemental strand, 12595848 - 12595808
Alignment:
Q  423 caaaagataaaataaagtcaaattattttcatataacctat 463  Q
    |||||||||||||||||| ||||| ||||||||||| ||||    
T  12595848 caaaagataaaataaagttaaattgttttcatataaactat 12595808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 394 - 438
Target Start/End: Original strand, 17498668 - 17498712
Alignment:
Q  394 aagtgtttatgtataagttatttttgtaccaaaagataaaataaa 438  Q
    ||||| ||| ||||||||||||| |||| ||||||||||||||||    
T  17498668 aagtgcttaggtataagttatttatgtaacaaaagataaaataaa 17498712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 385 - 469
Target Start/End: Original strand, 19177403 - 19177487
Alignment:
Q  385 ttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataagttg 469  Q
    |||||||| ||||| ||||||||||  ||||| |  | || |||||||||| ||||| || | ||||||||||| ||||||||||    
T  19177403 ttatcatataagtgcttatgtataaactatttctacaacagaagataaaattaagtctaactgttttcatataagctataagttg 19177487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 394 - 446
Target Start/End: Complemental strand, 21782706 - 21782654
Alignment:
Q  394 aagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaatt 446  Q
    |||||||||||| |||| ||||| | || |||||| |||||||||||||||||    
T  21782706 aagtgtttatgtttaagctatttctataacaaaagctaaaataaagtcaaatt 21782654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 386 - 458
Target Start/End: Complemental strand, 28586911 - 28586839
Alignment:
Q  386 tatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataa 458  Q
    ||||||| | ||| |||||||||   ||||| | || |||||||||||||||||||||| | |||||||||||    
T  28586911 tatcatatatgtggttatgtatacactatttctataacaaaagataaaataaagtcaaactgttttcatataa 28586839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 377 - 458
Target Start/End: Original strand, 40534110 - 40534193
Alignment:
Q  377 ataagcgcttatcatacaagtgtttatgtataagttatttttgtacc--aaaagataaaataaagtcaaattattttcatataa 458  Q
    |||||||||||||||| |||   ||||||||||| ||||| | |||   ||||||| ||||||| ||| |||||||||||||||    
T  40534110 ataagcgcttatcatataaggacttatgtataagctatttctatacacgaaaagatgaaataaaatcacattattttcatataa 40534193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 56; Significance: 7e-23; HSPs: 69)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 386 - 469
Target Start/End: Original strand, 37788786 - 37788868
Alignment:
Q  386 tatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataagttg 469  Q
    ||||||||||||||||||||||||||||||||  || ||||||||||||||||||| |||||||||| ||||| ||||||||||    
T  37788786 tatcatacaagtgtttatgtataagttatttta-taacaaaagataaaataaagtccaattattttcgtataatctataagttg 37788868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 384 - 457
Target Start/End: Original strand, 38462204 - 38462277
Alignment:
Q  384 cttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatata 457  Q
    ||||||||| |||||||||| |||||| ||||| | ||||||||||||||||||||||||| | ||||||||||    
T  38462204 cttatcatataagtgtttatttataagctatttctataccaaaagataaaataaagtcaaactgttttcatata 38462277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 401 - 463
Target Start/End: Original strand, 1395611 - 1395673
Alignment:
Q  401 tatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctat 463  Q
    |||||||||| ||||| | || |||||||||||||||||||||||||||||||||||| ||||    
T  1395611 tatgtataagctatttctataacaaaagataaaataaagtcaaattattttcatataagctat 1395673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 385 - 455
Target Start/End: Complemental strand, 16790502 - 16790432
Alignment:
Q  385 ttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcata 455  Q
    |||||||| ||||| ||||||||||| ||||||| || ||| |||||||||||| ||||||||||||||||    
T  16790502 ttatcatataagtgcttatgtataagctatttttataacaacagataaaataaaatcaaattattttcata 16790432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 403 - 469
Target Start/End: Original strand, 29771751 - 29771817
Alignment:
Q  403 tgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataagttg 469  Q
    |||||||||||||| | |||||||||| ||| |||||| ||||||||||||||||| ||||||||||    
T  29771751 tgtataagttatttctataccaaaagacaaagtaaagtgaaattattttcatataaactataagttg 29771817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 384 - 458
Target Start/End: Complemental strand, 33307727 - 33307653
Alignment:
Q  384 cttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataa 458  Q
    ||||||||| ||||| ||||||||||| |||||  ||| ||||| || |||||||||||||||||||||||||||    
T  33307727 cttatcatataagtgcttatgtataagctatttcagtaacaaaatatgaaataaagtcaaattattttcatataa 33307653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 379 - 463
Target Start/End: Complemental strand, 36783488 - 36783402
Alignment:
Q  379 aagcgcttatcat-acaagtgtttatgtataa-gttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctat 463  Q
    ||||||||||||| | |||||||||||||||| | ||||| | ||||||||||||||||||||| ||||| ||||||||||| ||||    
T  36783488 aagcgcttatcatgataagtgtttatgtataaagctatttctataccaaaagataaaataaagtaaaattgttttcatataaactat 36783402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 385 - 467
Target Start/End: Complemental strand, 43116574 - 43116492
Alignment:
Q  385 ttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataagt 467  Q
    ||||||||||||||||||||| |||| ||||| | || ||||||||||||| || |||||  |||||||||||| ||||||||    
T  43116574 ttatcatacaagtgtttatgtgtaagctatttctataacaaaagataaaatcaaatcaaacaattttcatataagctataagt 43116492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 378 - 455
Target Start/End: Complemental strand, 3182515 - 3182438
Alignment:
Q  378 taagcgcttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcata 455  Q
    |||| |||||||||  |||||||||||||||||||| || | ||  ||||||||||||||||||||||| ||||||||    
T  3182515 taagtgcttatcatttaagtgtttatgtataagttacttctatagaaaaagataaaataaagtcaaattgttttcata 3182438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 378 - 458
Target Start/End: Complemental strand, 20349629 - 20349549
Alignment:
Q  378 taagcgcttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataa 458  Q
    |||| |||||||||| |||||||| |||||||| |||||  ||| |||| |||||||| ||||| ||||||||||||||||    
T  20349629 taagtgcttatcatataagtgtttgtgtataagctatttcagtaacaaaggataaaatgaagtctaattattttcatataa 20349549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 383 - 455
Target Start/End: Complemental strand, 44374792 - 44374720
Alignment:
Q  383 gcttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcata 455  Q
    |||||||||| ||||| ||||||||||| ||| | | || |||||||||||||||||||||||| ||||||||    
T  44374792 gcttatcatataagtgcttatgtataagctatatctttaacaaaagataaaataaagtcaaattgttttcata 44374720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 384 - 452
Target Start/End: Complemental strand, 49772815 - 49772747
Alignment:
Q  384 cttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttc 452  Q
    ||||||||| ||||||||||||||||| ||||||||||  |||| ||||||||||||| |||| |||||    
T  49772815 cttatcatataagtgtttatgtataagctatttttgtaataaaaaataaaataaagtctaattgttttc 49772747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 402 - 469
Target Start/End: Original strand, 48397587 - 48397654
Alignment:
Q  402 atgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataagttg 469  Q
    ||||||||||||||||| ||  ||||||||||||||||||||||| |||| || ||| ||||||||||    
T  48397587 atgtataagttatttttataataaaagataaaataaagtcaaattgtttttatttaagctataagttg 48397654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 379 - 469
Target Start/End: Complemental strand, 22214833 - 22214743
Alignment:
Q  379 aagcgcttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataagttg 469  Q
    |||| |||||| || |||||  ||||||||| |||||| | || |||| ||||||||||||| ||||| | ||||||||||||||||||||    
T  22214833 aagcacttatcgtataagtgcgtatgtataaattatttctataacaaaggataaaataaagtgaaattgtattcatataacctataagttg 22214743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 379 - 469
Target Start/End: Original strand, 28779274 - 28779364
Alignment:
Q  379 aagcgcttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataagttg 469  Q
    |||||||||||||| || || || |||||||| | ||||| || ||  |||| ||||||||||||| ||||||||||||| ||||||||||    
T  28779274 aagcgcttatcatataattgcttttgtataagctgtttttataacatcagatgaaataaagtcaaactattttcatataagctataagttg 28779364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 423 - 469
Target Start/End: Complemental strand, 32555089 - 32555043
Alignment:
Q  423 caaaagataaaataaagtcaaattattttcatataacctataagttg 469  Q
    |||||||||||||||||||||||||||||| ||||| ||||||||||    
T  32555089 caaaagataaaataaagtcaaattattttcctataagctataagttg 32555043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 394 - 455
Target Start/End: Original strand, 3757981 - 3758042
Alignment:
Q  394 aagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcata 455  Q
    ||||| ||||||||||| |||||||||| ||||| |||||||||||||||| | ||||||||    
T  3757981 aagtgcttatgtataagctatttttgtaacaaaatataaaataaagtcaaactcttttcata 3758042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 397 - 458
Target Start/End: Complemental strand, 4990691 - 4990630
Alignment:
Q  397 tgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataa 458  Q
    |||||||||||||||||||| |||| |||| |||||||| |||||||| | |||||||||||    
T  4990691 tgtttatgtataagttatttctgtatcaaaggataaaatgaagtcaaacttttttcatataa 4990630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 394 - 466
Target Start/End: Complemental strand, 20192743 - 20192671
Alignment:
Q  394 aagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataag 466  Q
    ||||| ||||||||||| ||||| | || ||||||||||||||||||||||   ||||||||||| |||||||    
T  20192743 aagtgcttatgtataagctatttatataacaaaagataaaataaagtcaaacagttttcatataatctataag 20192671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 385 - 465
Target Start/End: Original strand, 32703062 - 32703142
Alignment:
Q  385 ttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataa 465  Q
    |||||||| || |||||||||||||| ||||| | |   ||||||||||||||| ||||||| ||||||||||| ||||||    
T  32703062 ttatcatataaatgtttatgtataagctatttctattataaaagataaaataaactcaaattgttttcatataagctataa 32703142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 406 - 465
Target Start/End: Complemental strand, 37689509 - 37689450
Alignment:
Q  406 ataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataa 465  Q
    ||||| ||||||| || ||||||||||| |||||| ||||||||||||||||| ||||||    
T  37689509 ataagctatttttataacaaaagataaagtaaagttaaattattttcatataagctataa 37689450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 384 - 451
Target Start/End: Original strand, 39971242 - 39971309
Alignment:
Q  384 cttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattatttt 451  Q
    ||||||||| ||||| |||||||||||||| || | || ||||||||||||||||| |||||| ||||    
T  39971242 cttatcatataagtgcttatgtataagttacttatataacaaaagataaaataaagccaaattgtttt 39971309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 403 - 469
Target Start/End: Complemental strand, 24235811 - 24235745
Alignment:
Q  403 tgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataagttg 469  Q
    |||||||||||||| | || |||||||||| ||||||||||| |||||  |||||| ||||||||||    
T  24235811 tgtataagttatttctataacaaaagataatataaagtcaaactatttgaatataagctataagttg 24235745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 394 - 444
Target Start/End: Complemental strand, 24605153 - 24605103
Alignment:
Q  394 aagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaa 444  Q
    ||||||||||||||||||||||| | || |||||||| |||||||||||||    
T  24605153 aagtgtttatgtataagttatttctataacaaaagatgaaataaagtcaaa 24605103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 400 - 454
Target Start/End: Complemental strand, 48365010 - 48364956
Alignment:
Q  400 ttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcat 454  Q
    |||||||||||||||||   || |||||||||||||||||||||||| |||||||    
T  48365010 ttatgtataagttatttcgataacaaaagataaaataaagtcaaattgttttcat 48364956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 377 - 438
Target Start/End: Complemental strand, 16790242 - 16790181
Alignment:
Q  377 ataagcgcttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaa 438  Q
    ||||||| |||||||| ||||| |||| |||||||||||| | || ||||||||||||||||    
T  16790242 ataagcgtttatcatataagtgcttatatataagttatttctataacaaaagataaaataaa 16790181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 377 - 458
Target Start/End: Original strand, 22232742 - 22232823
Alignment:
Q  377 ataagcgcttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataa 458  Q
    |||||| ||||||||| || || | ||||||||| ||||| | || |||| ||||||||||||||||| | |||||||||||    
T  22232742 ataagctcttatcatataaatgctcatgtataagctatttatataacaaatgataaaataaagtcaaactgttttcatataa 22232823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 377 - 457
Target Start/End: Complemental strand, 24268309 - 24268228
Alignment:
Q  377 ataagcgcttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaa-ttattttcatata 457  Q
    ||||||| |||||||||||||| ||||||||||  ||||| | || |||||| |||||| |||||||| || ||||||||||    
T  24268309 ataagcgtttatcatacaagtgcttatgtataaactatttctatagcaaaagttaaaatcaagtcaaactttttttcatata 24268228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 423 - 456
Target Start/End: Original strand, 25195386 - 25195419
Alignment:
Q  423 caaaagataaaataaagtcaaattattttcatat 456  Q
    ||||||||||||||||||||||||||||||||||    
T  25195386 caaaagataaaataaagtcaaattattttcatat 25195419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 385 - 458
Target Start/End: Original strand, 27792796 - 27792869
Alignment:
Q  385 ttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataa 458  Q
    |||||||| ||||| ||||||||||| |||||    | ||||||||||||||| |||||| |||||||||||||    
T  27792796 ttatcatataagtgcttatgtataagctatttcaaaaacaaaagataaaataaggtcaaactattttcatataa 27792869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 393 - 458
Target Start/End: Complemental strand, 53736251 - 53736186
Alignment:
Q  393 caagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataa 458  Q
    |||||| ||| |||| |||||||| | || ||||||||||||||| |||||| |||||||||||||    
T  53736251 caagtgcttacgtatgagttatttctataacaaaagataaaataatgtcaaactattttcatataa 53736186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 385 - 458
Target Start/End: Original strand, 54775052 - 54775125
Alignment:
Q  385 ttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataa 458  Q
    |||||||| ||||| ||| || |||||||||| | || ||||||||||||||||||||||  ||||| ||||||    
T  54775052 ttatcataaaagtgcttacgtttaagttatttctataacaaaagataaaataaagtcaaaccatttttatataa 54775125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 425 - 469
Target Start/End: Complemental strand, 2865765 - 2865721
Alignment:
Q  425 aaagataaaataaagtcaaattattttcatataacctataagttg 469  Q
    |||| ||||| ||||||||||| ||||||||||||||||||||||    
T  2865765 aaagttaaaacaaagtcaaattgttttcatataacctataagttg 2865721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 394 - 438
Target Start/End: Complemental strand, 8142847 - 8142803
Alignment:
Q  394 aagtgtttatgtataagttatttttgtaccaaaagataaaataaa 438  Q
    ||||||||||||||||| ||||||| || ||||||||||||||||    
T  8142847 aagtgtttatgtataagctatttttatatcaaaagataaaataaa 8142803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 406 - 458
Target Start/End: Complemental strand, 10101601 - 10101549
Alignment:
Q  406 ataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataa 458  Q
    ||||||||||| | || |||||||||||||||||| ||||| |||||||||||    
T  10101601 ataagttatttctataacaaaagataaaataaagttaaattgttttcatataa 10101549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 406 - 458
Target Start/End: Complemental strand, 10212526 - 10212474
Alignment:
Q  406 ataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataa 458  Q
    ||||||||||| | || |||||||||||||||||| ||||| |||||||||||    
T  10212526 ataagttatttctataacaaaagataaaataaagttaaattgttttcatataa 10212474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 377 - 465
Target Start/End: Original strand, 21574408 - 21574495
Alignment:
Q  377 ataagcgcttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataa 465  Q
    |||| ||||| ||||  |||||||||||||| |||| ||||| ||| | ||||||||||||||| ||||| ||| ||||||| ||||||    
T  21574408 ataaacgcttctcatgtaagtgtttatgtatgagttgtttttatac-acaagataaaataaagttaaattgtttacatataagctataa 21574495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 394 - 469
Target Start/End: Complemental strand, 23530322 - 23530246
Alignment:
Q  394 aagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaatta-ttttcatataacctataagttg 469  Q
    ||||| ||| ||| ||| || |||| || ||||||||||||||||||||||||| |||||||||||  |||||||||    
T  23530322 aagtgcttacgtagaagctagttttctaacaaaagataaaataaagtcaaattatttttcatataaagtataagttg 23530246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 397 - 465
Target Start/End: Complemental strand, 30669104 - 30669036
Alignment:
Q  397 tgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataa 465  Q
    |||||||||||||| ||||||| || ||||||||||||||| ||  |||| ||||| ||||| ||||||    
T  30669104 tgtttatgtataagctatttttataacaaaagataaaataatgttgaatttttttcttataaactataa 30669036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 386 - 458
Target Start/End: Complemental strand, 36646527 - 36646455
Alignment:
Q  386 tatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataa 458  Q
    ||||||||||||||| || |||||| ||||| | |  ||||||||||||||||||  |||| |||||||||||    
T  36646527 tatcatacaagtgttgatatataagctatttctatgacaaaagataaaataaagtataattgttttcatataa 36646455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 383 - 443
Target Start/End: Complemental strand, 41028999 - 41028939
Alignment:
Q  383 gcttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaa 443  Q
    |||||||||| ||||| ||||||||||| ||||| | || ||||||| |||||||||||||    
T  41028999 gcttatcatataagtgcttatgtataagctatttctataacaaaagaaaaaataaagtcaa 41028939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 385 - 456
Target Start/End: Original strand, 32663566 - 32663636
Alignment:
Q  385 ttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatat 456  Q
    ||||||||||| |||||||| ||||||||||| | || |||||||| |||||| ||||||  ||||||||||    
T  32663566 ttatcatacaattgtttatgcataagttatttctataacaaaagat-aaataaggtcaaacaattttcatat 32663636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 398 - 444
Target Start/End: Complemental strand, 36283703 - 36283659
Alignment:
Q  398 gtttatgtataagttatttttgtaccaaaagataaaataaagtcaaa 444  Q
    ||||||||||||||||||||||||  | |||||||||||||||||||    
T  36283703 gtttatgtataagttatttttgta--acaagataaaataaagtcaaa 36283659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 378 - 464
Target Start/End: Original strand, 25129748 - 25129833
Alignment:
Q  378 taagcgcttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctata 464  Q
    ||||| |||| ||||||| || |||||||||| |||||  | |||||||||||| |||||||||||| |  |||||||||| |||||    
T  25129748 taagcacttaccatacaa-tgcttatgtataacttattcctataccaaaagatacaataaagtcaaactgctttcatataatctata 25129833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 423 - 457
Target Start/End: Original strand, 26990696 - 26990730
Alignment:
Q  423 caaaagataaaataaagtcaaattattttcatata 457  Q
    |||||||||||||||||||||||| ||||||||||    
T  26990696 caaaagataaaataaagtcaaattcttttcatata 26990730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 383 - 469
Target Start/End: Original strand, 36101490 - 36101576
Alignment:
Q  383 gcttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataagttg 469  Q
    |||||||| | ||||| ||||| ||||| ||||| ||||  | ||||||||||||||||||| |  |||| ||||| ||||||||||    
T  36101490 gcttatcaaataagtggttatgaataagctatttctgtaatataagataaaataaagtcaaactgatttcgtataatctataagttg 36101576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 405 - 463
Target Start/End: Complemental strand, 49587042 - 49586984
Alignment:
Q  405 tataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctat 463  Q
    |||||| ||||| | || |||||||||||||||||||||| | ||||||||||| ||||    
T  49587042 tataagctatttctataacaaaagataaaataaagtcaaactgttttcatataagctat 49586984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 385 - 455
Target Start/End: Original strand, 53457301 - 53457371
Alignment:
Q  385 ttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcata 455  Q
    |||||||  ||||||||| ||||||| || ||   || |||||||||||||||||||||| ||||||||||    
T  53457301 ttatcatttaagtgtttacgtataagctacttcgataacaaaagataaaataaagtcaaactattttcata 53457371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 398 - 451
Target Start/End: Complemental strand, 2128384 - 2128331
Alignment:
Q  398 gtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattatttt 451  Q
    ||||||||||||| ||||| | || |||||||||||||||||| ||||| ||||    
T  2128384 gtttatgtataagctatttctataacaaaagataaaataaagttaaattgtttt 2128331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 428 - 469
Target Start/End: Complemental strand, 3467491 - 3467450
Alignment:
Q  428 gataaaataaagtcaaattattttcatataacctataagttg 469  Q
    ||||||||||||||||||| ||||||||||  ||||||||||    
T  3467491 gataaaataaagtcaaattgttttcatatagactataagttg 3467450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 377 - 418
Target Start/End: Complemental strand, 9279480 - 9279439
Alignment:
Q  377 ataagcgcttatcatacaagtgtttatgtataagttattttt 418  Q
    |||||||||||||||| |||  ||||||||||||||||||||    
T  9279480 ataagcgcttatcatataagcatttatgtataagttattttt 9279439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 386 - 466
Target Start/End: Complemental strand, 25183134 - 25183053
Alignment:
Q  386 tatcatacaagtgttta-tgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataag 466  Q
    ||||||| ||||||||| |||||||  ||||||| || |||||||| ||||||||| ||  ||||||||||| | |||||||    
T  25183134 tatcatataagtgtttaatgtataaactatttttataacaaaagattaaataaagttaagctattttcatatgagctataag 25183053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 423 - 468
Target Start/End: Original strand, 26599140 - 26599185
Alignment:
Q  423 caaaagataaaataaagtcaaattattttcatataacctataagtt 468  Q
    |||||||||||||||||||||||  |||||||||||  ||||||||    
T  26599140 caaaagataaaataaagtcaaatagttttcatataaggtataagtt 26599185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 378 - 455
Target Start/End: Complemental strand, 28283730 - 28283653
Alignment:
Q  378 taagcgcttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcata 455  Q
    |||||| |||||||| ||||| ||||| |||||||| || | || |||||||||||   |||||||| ||||||||||    
T  28283730 taagcgtttatcatataagtgcttatgcataagttacttctataacaaaagataaatgtaagtcaaactattttcata 28283653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 402 - 451
Target Start/End: Original strand, 33882969 - 33883018
Alignment:
Q  402 atgtataagttatttttgtaccaaaagataaaataaagtcaaattatttt 451  Q
    |||||||| |||||| | || |||||||||||||||||| ||||||||||    
T  33882969 atgtataaattatttctataacaaaagataaaataaagtgaaattatttt 33883018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 400 - 469
Target Start/End: Complemental strand, 40122883 - 40122815
Alignment:
Q  400 ttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataagttg 469  Q
    ||||||||||| |||||   || |||||||||||||||||||||| | |||||||| || ||||||||||    
T  40122883 ttatgtataagctatttcaataacaaaagataaaataaagtcaaactgttttcata-aagctataagttg 40122815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 382 - 443
Target Start/End: Original strand, 41159030 - 41159091
Alignment:
Q  382 cgcttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaa 443  Q
    |||||||| || ||||| ||||||||||||||||  | || | |||||||||||||||||||    
T  41159030 cgcttatcgtataagtgcttatgtataagttattcctataactaaagataaaataaagtcaa 41159091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 394 - 443
Target Start/End: Complemental strand, 49546624 - 49546575
Alignment:
Q  394 aagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaa 443  Q
    ||||| |||||| |||| ||||||| || |||||||||||||||||||||    
T  49546624 aagtgcttatgtgtaagatatttttataacaaaagataaaataaagtcaa 49546575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 377 - 438
Target Start/End: Original strand, 49739483 - 49739544
Alignment:
Q  377 ataagcgcttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaa 438  Q
    |||||||||| ||||| ||||| | ||||||||| |||||||  | ||||||||||||||||    
T  49739483 ataagcgcttttcatataagtggtgatgtataagctatttttacatcaaaagataaaataaa 49739544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 394 - 455
Target Start/End: Complemental strand, 52413258 - 52413197
Alignment:
Q  394 aagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcata 455  Q
    ||||| ||||||||||| ||||||| || ||||||||| |||||| | ||| ||||||||||    
T  52413258 aagtgcttatgtataagctatttttataacaaaagatagaataaaatgaaactattttcata 52413197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 386 - 458
Target Start/End: Complemental strand, 905115 - 905043
Alignment:
Q  386 tatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataa 458  Q
    ||||||| ||| | ||| ||||||| ||||| | || ||||||||||||||||||||| || ||| |||||||    
T  905115 tatcatataagcgcttaagtataagctatttctataacaaaagataaaataaagtcaatttgtttgcatataa 905043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 389 - 465
Target Start/End: Complemental strand, 8007837 - 8007761
Alignment:
Q  389 catacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataa 465  Q
    |||||||| | ||||||||||| | ||| | || ||||||||||| |||||||||| | || |||||||| ||||||    
T  8007837 catacaagggcttatgtataagctgtttctataacaaaagataaagtaaagtcaaactgttatcatataagctataa 8007761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 406 - 458
Target Start/End: Original strand, 10357378 - 10357430
Alignment:
Q  406 ataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataa 458  Q
    ||||||||||| | || ||||||||||||||| || ||||| |||||||||||    
T  10357378 ataagttatttctataacaaaagataaaataatgttaaatttttttcatataa 10357430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 406 - 458
Target Start/End: Complemental strand, 15304472 - 15304420
Alignment:
Q  406 ataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataa 458  Q
    ||||| ||||| | || |||||||||||||||||| ||||| |||||||||||    
T  15304472 ataagctatttctataacaaaagataaaataaagttaaattgttttcatataa 15304420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 426 - 466
Target Start/End: Original strand, 23315591 - 23315631
Alignment:
Q  426 aagataaaataaagtcaaattattttcatataacctataag 466  Q
    ||||||||||||||||||||| ||||||||||  |||||||    
T  23315591 aagataaaataaagtcaaattgttttcatataggctataag 23315631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 378 - 438
Target Start/End: Original strand, 25964359 - 25964419
Alignment:
Q  378 taagcgcttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaa 438  Q
    |||| |||||||||| ||||  || |||||||| ||||||| || ||||||||||||||||    
T  25964359 taagtgcttatcatataagttcttttgtataagctatttttataacaaaagataaaataaa 25964419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 377 - 417
Target Start/End: Complemental strand, 28843011 - 28842971
Alignment:
Q  377 ataagcgcttatcatacaagtgtttatgtataagttatttt 417  Q
    |||||||||||||||| ||||| ||||||||||| ||||||    
T  28843011 ataagcgcttatcatataagtgcttatgtataagctatttt 28842971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 394 - 442
Target Start/End: Original strand, 42039092 - 42039140
Alignment:
Q  394 aagtgtttatgtataagttatttttgtaccaaaagataaaataaagtca 442  Q
    ||||| ||||||||||| ||||| |||| ||||| ||||||||||||||    
T  42039092 aagtgcttatgtataagctatttctgtaacaaaaaataaaataaagtca 42039140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 402 - 458
Target Start/End: Original strand, 42809242 - 42809298
Alignment:
Q  402 atgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataa 458  Q
    ||||||||| ||||| | || |||||||||||||| ||| ||||| |||||||||||    
T  42809242 atgtataagctatttctataacaaaagataaaatatagttaaattgttttcatataa 42809298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 54; Significance: 1e-21; HSPs: 51)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 377 - 458
Target Start/End: Complemental strand, 3217344 - 3217263
Alignment:
Q  377 ataagcgcttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataa 458  Q
    ||||||| |||||||| ||||| ||||||||||| ||||||||||  | |||||||||||||||||||||||||||||||||    
T  3217344 ataagcgattatcatataagtgcttatgtataagctatttttgtaagagaagataaaataaagtcaaattattttcatataa 3217263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 377 - 444
Target Start/End: Original strand, 32975894 - 32975961
Alignment:
Q  377 ataagcgcttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaa 444  Q
    |||||||||| ||||| ||||||||||||||||||||||| |||| ||||| ||||||||||||||||    
T  32975894 ataagcgcttctcatataagtgtttatgtataagttatttctgtaacaaaatataaaataaagtcaaa 32975961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 394 - 468
Target Start/End: Complemental strand, 24836336 - 24836262
Alignment:
Q  394 aagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataagtt 468  Q
    |||| |||||||||||||||||| | || |||||||||||||||||||||||| ||||| ||||| |||||||||    
T  24836336 aagtatttatgtataagttatttctataacaaaagataaaataaagtcaaattgttttcgtataaactataagtt 24836262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 384 - 465
Target Start/End: Complemental strand, 29274376 - 29274295
Alignment:
Q  384 cttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataa 465  Q
    ||||||||| || || ||||||||||| ||||| | || |||||||||||||||||||||||| ||||||||||| ||||||    
T  29274376 cttatcatagaaatgcttatgtataagctatttctatagcaaaagataaaataaagtcaaattgttttcatataagctataa 29274295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 407 - 466
Target Start/End: Complemental strand, 2027530 - 2027471
Alignment:
Q  407 taagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataag 466  Q
    |||| ||||||| || |||||||||||||||||||||| |||||||||||||||||||||    
T  2027530 taagctatttttataacaaaagataaaataaagtcaaactattttcatataacctataag 2027471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 377 - 466
Target Start/End: Original strand, 22742282 - 22742371
Alignment:
Q  377 ataagcgcttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataag 466  Q
    ||||||||||||| || ||||  |||| |||||| ||||| | || |||| ||||||||||||||||||| ||||||||||| |||||||    
T  22742282 ataagcgcttatcgtataagttcttatctataagctatttgtataacaaaggataaaataaagtcaaattgttttcatataagctataag 22742371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 386 - 469
Target Start/End: Complemental strand, 10452505 - 10452422
Alignment:
Q  386 tatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataagttg 469  Q
    |||||||  |||| ||||||||||| ||||| | || ||||| |||||||||| ||||| ||||||||||||| ||||||||||    
T  10452505 tatcatatcagtgcttatgtataagctatttctataacaaaatataaaataaaatcaaactattttcatataagctataagttg 10452422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 378 - 445
Target Start/End: Complemental strand, 28531694 - 28531627
Alignment:
Q  378 taagcgcttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaat 445  Q
    ||||||||||||||| ||||| |  |||||||||||||| | || |||||||||||||||||||||||    
T  28531694 taagcgcttatcataaaagtgctcttgtataagttatttatataacaaaagataaaataaagtcaaat 28531627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 424 - 468
Target Start/End: Complemental strand, 27595674 - 27595630
Alignment:
Q  424 aaaagataaaataaagtcaaattattttcatataacctataagtt 468  Q
    ||||||||||||||||||||||||||||||||||| || ||||||    
T  27595674 aaaagataaaataaagtcaaattattttcatataagctgtaagtt 27595630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 394 - 469
Target Start/End: Original strand, 4006647 - 4006722
Alignment:
Q  394 aagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataagttg 469  Q
    ||||| ||||| ||||| ||||| | || |||| ||||||||||||||||||| |||| |||||| ||||||||||    
T  4006647 aagtgcttatgcataagatatttctataacaaatgataaaataaagtcaaattgtttttatataagctataagttg 4006722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 378 - 469
Target Start/End: Complemental strand, 11340777 - 11340687
Alignment:
Q  378 taagcgcttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataagttg 469  Q
    |||||||||| |||| ||||| |||| |||||| || || | || |||||||||||||||||| || |||||||||||||  ||||||||||    
T  11340777 taagcgctta-catataagtgcttatatataagataattctataacaaaagataaaataaagttaatttattttcatatacgctataagttg 11340687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 377 - 463
Target Start/End: Original strand, 2206506 - 2206592
Alignment:
Q  377 ataagcgcttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctat 463  Q
    |||||| |||||| || |||  ||| |||||||||||||||| || ||||||||||||||||||  |||| |||| |||||| ||||    
T  2206506 ataagctcttatcgtataagcatttctgtataagttatttttataacaaaagataaaataaagtataattgtttttatataagctat 2206592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 407 - 465
Target Start/End: Complemental strand, 7785866 - 7785808
Alignment:
Q  407 taagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataa 465  Q
    ||||||| || | ||||||||||||||||||||||||| | ||||||||||| ||||||    
T  7785866 taagttacttatataccaaaagataaaataaagtcaaactcttttcatataagctataa 7785808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 384 - 458
Target Start/End: Complemental strand, 8349811 - 8349737
Alignment:
Q  384 cttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataa 458  Q
    ||||||||| |||||||| |||||||  ||||| | || |||||||||||||||||| ||||| |||| ||||||    
T  8349811 cttatcatataagtgtttgtgtataaactatttctctaacaaaagataaaataaagttaaattgtttttatataa 8349737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 384 - 466
Target Start/End: Original strand, 10032494 - 10032576
Alignment:
Q  384 cttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataag 466  Q
    ||||||||| || |||||||||||||| ||||||| || ||| || | |||||||| |||| || |||||||||| |||||||    
T  10032494 cttatcatataaatgtttatgtataagctatttttataacaataggtgaaataaaggcaaactaatttcatataagctataag 10032576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 383 - 468
Target Start/End: Original strand, 2514624 - 2514709
Alignment:
Q  383 gcttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataagtt 468  Q
    |||||||||  ||||| ||||||||||| ||||| | ||  ||||||||||||||||||||| || ||| |||| | |||||||||    
T  2514624 gcttatcatgtaagtgcttatgtataagctatttctataataaaagataaaataaagtcaaactaattttatatgagctataagtt 2514709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 377 - 466
Target Start/End: Original strand, 3155092 - 3155181
Alignment:
Q  377 ataagcgcttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataag 466  Q
    ||||||| |||||||| || || ||||||||||| ||| | | |  |||||||||||| ||||||||| | ||| |||||||||||||||    
T  3155092 ataagcgtttatcatataaatggttatgtataagctatctcttttacaaaagataaaacaaagtcaaactgtttccatataacctataag 3155181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 377 - 446
Target Start/End: Original strand, 4248874 - 4248943
Alignment:
Q  377 ataagcgcttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaatt 446  Q
    |||||||||| ||||| ||||| |||| |||||| |||||   || ||||||||||||||||||||||||    
T  4248874 ataagcgcttgtcatataagtgcttatatataagctatttcaataacaaaagataaaataaagtcaaatt 4248943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 385 - 458
Target Start/End: Original strand, 5328898 - 5328971
Alignment:
Q  385 ttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataa 458  Q
    |||||||| ||||| ||| || |||||||||| | || ||||||||||||||||||||||  ||||| ||||||    
T  5328898 ttatcataaaagtgcttacgtttaagttatttctataacaaaagataaaataaagtcaaaccatttttatataa 5328971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 378 - 466
Target Start/End: Original strand, 10400186 - 10400274
Alignment:
Q  378 taagcgcttatcatacaagtgtttatgtataagttatttttgtaccaaaagat-aaaataaagtcaaattattttcatataacctataag 466  Q
    |||| |||||||||| || |||||||||||||| || |||| ||  ||||||| |||||||||||||||| || |||||||| |||||||    
T  10400186 taagggcttatcatataaatgtttatgtataagcta-ttttataataaaagataaaaataaagtcaaattgttatcatataagctataag 10400274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 377 - 458
Target Start/End: Complemental strand, 10749381 - 10749301
Alignment:
Q  377 ataagcgcttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataa 458  Q
    ||||||| |||||||| |||   |||||||||||| |||| | ||  ||||||||||||||||| |||||||||||||||||    
T  10749381 ataagcgtttatcatataagatgttatgtataagt-atttctataataaaagataaaataaagttaaattattttcatataa 10749301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 378 - 455
Target Start/End: Complemental strand, 31672621 - 31672544
Alignment:
Q  378 taagcgcttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcata 455  Q
    |||||| |||||||||||||||||||||||||  |||||   |  ||||| |||||||||||||||| | ||||||||    
T  31672621 taagcgattatcatacaagtgtttatgtataaactatttccatgacaaaaaataaaataaagtcaaactgttttcata 31672544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 377 - 458
Target Start/End: Complemental strand, 33068715 - 33068634
Alignment:
Q  377 ataagcgcttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataa 458  Q
    |||||||||||||| | || || ||||||||||||||||| | || |||||||||||||||  ||||| | |||||| ||||    
T  33068715 ataagcgcttatcaaataaatgcttatgtataagttatttctataacaaaagataaaataatatcaaactgttttcaaataa 33068634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 379 - 435
Target Start/End: Complemental strand, 5554917 - 5554861
Alignment:
Q  379 aagcgcttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaat 435  Q
    |||||| ||||||| | ||||||||||||||||||||| | || |||||||||||||    
T  5554917 aagcgcatatcatatacgtgtttatgtataagttatttctataacaaaagataaaat 5554861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 386 - 458
Target Start/End: Original strand, 7713950 - 7714022
Alignment:
Q  386 tatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataa 458  Q
    ||||||| ||| | ||||||||||  || |||  || |||||||||||||||||||||||| |||||||||||    
T  7713950 tatcatataagagcttatgtataaactactttcataacaaaagataaaataaagtcaaattgttttcatataa 7714022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 394 - 458
Target Start/End: Complemental strand, 20672002 - 20671938
Alignment:
Q  394 aagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataa 458  Q
    ||||| ||||||||||| ||||| |  | |||||||||||||||||||||||| ||||| |||||    
T  20672002 aagtgattatgtataagctatttctagatcaaaagataaaataaagtcaaattgttttcgtataa 20671938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 385 - 465
Target Start/End: Original strand, 21959652 - 21959732
Alignment:
Q  385 ttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataa 465  Q
    |||||||| ||||| ||| ||||||| |||||   || ||||||||||||||||||||| || ||| ||||||| ||||||    
T  21959652 ttatcatagaagtgcttaagtataagctatttccataacaaaagataaaataaagtcaatttgtttgcatataagctataa 21959732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 426 - 458
Target Start/End: Complemental strand, 27693544 - 27693512
Alignment:
Q  426 aagataaaataaagtcaaattattttcatataa 458  Q
    |||||||||||||||||||||||||||||||||    
T  27693544 aagataaaataaagtcaaattattttcatataa 27693512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 423 - 466
Target Start/End: Complemental strand, 281956 - 281913
Alignment:
Q  423 caaaagataaaataaagtcaaattattttcatataacctataag 466  Q
    ||||||||||||||||||||| || ||||||||||| |||||||    
T  281956 caaaagataaaataaagtcaacttgttttcatataagctataag 281913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 383 - 458
Target Start/End: Original strand, 7354126 - 7354201
Alignment:
Q  383 gcttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataa 458  Q
    |||| |||||||||| || ||||||||  ||||| | || |||||||||||||||| || || |||||||||||||    
T  7354126 gcttttcatacaagttttcatgtataaactatttctataacaaaagataaaataaaatcgaactattttcatataa 7354201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 423 - 458
Target Start/End: Original strand, 27713469 - 27713504
Alignment:
Q  423 caaaagataaaataaagtcaaattattttcatataa 458  Q
    |||||||||||||||||||||||| |||||||||||    
T  27713469 caaaagataaaataaagtcaaattcttttcatataa 27713504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 405 - 444
Target Start/End: Original strand, 27857319 - 27857358
Alignment:
Q  405 tataagttatttttgtaccaaaagataaaataaagtcaaa 444  Q
    ||||||||| ||||||| ||||||||||||||||||||||    
T  27857319 tataagttacttttgtaacaaaagataaaataaagtcaaa 27857358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 395 - 458
Target Start/End: Original strand, 32513759 - 32513821
Alignment:
Q  395 agtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataa 458  Q
    |||||||||| ||||||||||| | || ||||| |||||||||||||||| ||||| |||||||    
T  32513759 agtgtttatgcataagttatttctataacaaaa-ataaaataaagtcaaactatttccatataa 32513821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 423 - 465
Target Start/End: Original strand, 1402958 - 1403000
Alignment:
Q  423 caaaagataaaataaagtcaaattattttcatataacctataa 465  Q
    |||||||||||||||||| ||| ||||||||||||| ||||||    
T  1402958 caaaagataaaataaagttaaactattttcatataagctataa 1403000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 423 - 469
Target Start/End: Original strand, 2117365 - 2117411
Alignment:
Q  423 caaaagataaaataaagtcaaattattttcatataacctataagttg 469  Q
    |||| ||||||| ||||||||| ||||||||||||| ||||||||||    
T  2117365 caaaggataaaacaaagtcaaactattttcatataatctataagttg 2117411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 377 - 455
Target Start/End: Complemental strand, 6078443 - 6078365
Alignment:
Q  377 ataagcgcttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcata 455  Q
    |||||||||||||||||| ||| ||| |||| || ||||| | |  || ||| ||||||||||||||||| ||||||||    
T  6078443 ataagcgcttatcatacatgtggttacgtatgagctatttctatcacagaaggtaaaataaagtcaaattgttttcata 6078365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 400 - 466
Target Start/End: Complemental strand, 9093687 - 9093621
Alignment:
Q  400 ttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataag 466  Q
    ||||| ||||| ||||| | || |||||||||||||||||| ||||| ||||| ||||| |||||||    
T  9093687 ttatggataagctatttctatatcaaaagataaaataaagttaaattgttttcgtataagctataag 9093621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 400 - 458
Target Start/End: Original strand, 24476541 - 24476599
Alignment:
Q  400 ttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataa 458  Q
    ||||||||||| ||||| | || |||||||||||||  ||| |||||||||||||||||    
T  24476541 ttatgtataagctatttctatagcaaaagataaaatgtagttaaattattttcatataa 24476599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 384 - 457
Target Start/End: Complemental strand, 28660234 - 28660160
Alignment:
Q  384 cttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaat-aaagtcaaattattttcatata 457  Q
    ||||||||| |||||||||| ||||| |||||||| |   |||||||||||| ||||||||||| |||| |||||    
T  28660234 cttatcatataagtgtttatatataaattatttttatgataaaagataaaataaaagtcaaattgttttgatata 28660160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 412 - 458
Target Start/End: Complemental strand, 28660879 - 28660833
Alignment:
Q  412 tatttttgtaccaaaagataaaataaagtcaaattattttcatataa 458  Q
    ||||||| || ||| |||||||||||||| |||||||||||||||||    
T  28660879 tatttttataacaatagataaaataaagttaaattattttcatataa 28660833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 395 - 469
Target Start/End: Complemental strand, 34429826 - 34429752
Alignment:
Q  395 agtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataagttg 469  Q
    |||| ||||||||||||||||| | ||  || ||||||||||||||| || | ||||| ||||| ||||||||||    
T  34429826 agtgattatgtataagttatttctataataagagataaaataaagtctaactgttttcttataaactataagttg 34429752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 384 - 456
Target Start/End: Original strand, 1497903 - 1497976
Alignment:
Q  384 cttatcatacaagtgtttatgtataagttatttttgta-ccaaaagataaaataaagtcaaattattttcatat 456  Q
    ||||||||  ||||| |||||| |||| ||||||| || ||||||| ||||||||||||||| | |||||||||    
T  1497903 cttatcatttaagtgcttatgtttaagctatttttttaaccaaaaggtaaaataaagtcaaactgttttcatat 1497976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 429 - 458
Target Start/End: Complemental strand, 2732341 - 2732312
Alignment:
Q  429 ataaaataaagtcaaattattttcatataa 458  Q
    ||||||||||||||||||||||||||||||    
T  2732341 ataaaataaagtcaaattattttcatataa 2732312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 385 - 458
Target Start/End: Complemental strand, 4325454 - 4325381
Alignment:
Q  385 ttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataa 458  Q
    |||||||| ||||| |||||| |||||||||| | ||  ||| ||||||||| || |||| |||||||||||||    
T  4325454 ttatcatataagtgcttatgtctaagttatttctataataaatgataaaatagagacaaactattttcatataa 4325381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 383 - 444
Target Start/End: Complemental strand, 8420345 - 8420284
Alignment:
Q  383 gcttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaa 444  Q
    |||||||||| ||||| ||||||| ||||||||| | ||  ||| |||||||||||||||||    
T  8420345 gcttatcatataagtgcttatgtacaagttatttctttaataaatgataaaataaagtcaaa 8420284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 424 - 469
Target Start/End: Complemental strand, 11363475 - 11363430
Alignment:
Q  424 aaaagataaaataaagtcaaattattttcatataacctataagttg 469  Q
    ||||||||||||||||| ||||||||||||| |||  |||||||||    
T  11363475 aaaagataaaataaagttaaattattttcatgtaagttataagttg 11363430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 404 - 444
Target Start/End: Complemental strand, 2027931 - 2027891
Alignment:
Q  404 gtataagttatttttgtaccaaaagataaaataaagtcaaa 444  Q
    ||||||| ||||||||||  |||||||||||||||||||||    
T  2027931 gtataagctatttttgtattaaaagataaaataaagtcaaa 2027891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 390 - 458
Target Start/End: Complemental strand, 2034579 - 2034512
Alignment:
Q  390 atacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataa 458  Q
    ||||||||| ||||||||||| | |||||  | |||| ||||||||||||||||| || ||||||||||    
T  2034579 atacaagtgcttatgtataagctgtttttacaacaaa-gataaaataaagtcaaactactttcatataa 2034512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 400 - 452
Target Start/End: Complemental strand, 9559672 - 9559620
Alignment:
Q  400 ttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttc 452  Q
    ||||||||||||||||| | || |||||||||||||||| | ||||| |||||    
T  9559672 ttatgtataagttatttctatagcaaaagataaaataaatttaaattgttttc 9559620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 390 - 454
Target Start/End: Original strand, 29940725 - 29940789
Alignment:
Q  390 atacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcat 454  Q
    ||||||||| ||| ||||||| | ||| | || ||||||||||||||||||||| || |||||||    
T  29940725 atacaagtgcttaagtataagctttttctataacaaaagataaaataaagtcaatttgttttcat 29940789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 394 - 434
Target Start/End: Original strand, 33116538 - 33116578
Alignment:
Q  394 aagtgtttatgtataagttatttttgtaccaaaagataaaa 434  Q
    ||||||||||||||||||||||| | || ||||||||||||    
T  33116538 aagtgtttatgtataagttatttctttaacaaaagataaaa 33116578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 53; Significance: 4e-21; HSPs: 2)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 377 - 469
Target Start/End: Original strand, 27492 - 27584
Alignment:
Q  377 ataagcgcttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataagttg 469  Q
    |||||| ||||||||  ||||| ||||||||||||||||| | || || ||||||||||||||||||||| ||||||||||| ||||||||||    
T  27492 ataagctcttatcatgtaagtgcttatgtataagttatttctataacagaagataaaataaagtcaaattgttttcatataaactataagttg 27584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024; HSP #2
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 400 - 458
Target Start/End: Complemental strand, 21409 - 21351
Alignment:
Q  400 ttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataa 458  Q
    ||||||||||| ||||||| ||  ||||||||||||||||| ||||| ||||| |||||    
T  21409 ttatgtataagctatttttataggaaaagataaaataaagttaaattgttttcgtataa 21351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 52; Significance: 2e-20; HSPs: 64)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 377 - 464
Target Start/End: Original strand, 4200145 - 4200232
Alignment:
Q  377 ataagcgcttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctata 464  Q
    |||||| ||||||||  |||||||||| |||||||||||||| || ||||||||||||||||||||| || ||||||||||| |||||    
T  4200145 ataagcacttatcatctaagtgtttatatataagttatttttataacaaaagataaaataaagtcaagttgttttcatataagctata 4200232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 393 - 469
Target Start/End: Original strand, 15360826 - 15360902
Alignment:
Q  393 caagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataagttg 469  Q
    ||||||||||||||| |||||||| | || |||||||||||||||||||||| | ||||||||||| ||||||||||    
T  15360826 caagtgtttatgtattagttatttctataacaaaagataaaataaagtcaaactgttttcatataagctataagttg 15360902  T

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Target: chr1; HSP #3
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 378 - 467
Target Start/End: Complemental strand, 45990211 - 45990122
Alignment:
Q  378 taagcgcttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataagt 467  Q
    |||| ||||||||||||| || | ||||||| | ||||||| || |||||||||||||||||| ||||| ||||||||||| ||||||||    
T  45990211 taagagcttatcatacaaatgctaatgtatatgctatttttatatcaaaagataaaataaagtaaaattgttttcatataagctataagt 45990122  T

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Target: chr1; HSP #4
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 378 - 458
Target Start/End: Original strand, 870962 - 871042
Alignment:
Q  378 taagcgcttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataa 458  Q
    ||||||||||||||| ||||| ||||||||||  ||||||| || ||||||||||||| ||||||| || |||||||||||    
T  870962 taagcgcttatcatataagtgcttatgtataaactatttttataacaaaagataaaattaagtcaattttttttcatataa 871042  T

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Target: chr1; HSP #5
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 384 - 469
Target Start/End: Complemental strand, 28467456 - 28467369
Alignment:
Q  384 cttatcatacaagtgtttatgtataagttatttttgtac--caaaagataaaataaagtcaaattattttcatataacctataagttg 469  Q
    ||||||||||| ||| ||||||||||  ||||| ||||   |||||||||||||||||||||||||||||||||||| ||| ||||||    
T  28467456 cttatcatacaggtgattatgtataacctatttgtgtataacaaaagataaaataaagtcaaattattttcatataagctacaagttg 28467369  T

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Target: chr1; HSP #6
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 377 - 455
Target Start/End: Complemental strand, 7274093 - 7274015
Alignment:
Q  377 ataagcgcttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcata 455  Q
    ||||| |||||||||| || || ||||||||| ||||||||| || |||||||| ||||||||||||||| ||||||||    
T  7274093 ataagtgcttatcatataaatgcttatgtatatgttatttttataacaaaagatgaaataaagtcaaattgttttcata 7274015  T

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Target: chr1; HSP #7
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 377 - 466
Target Start/End: Original strand, 49516985 - 49517075
Alignment:
Q  377 ataagcgcttatcatacaagt-gtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataag 466  Q
    ||||||| |||||||| || | |||| |||||||||||||| | || |||||||||||||||||||||||| ||||||| ||| |||||||    
T  49516985 ataagcgtttatcatataaattgtttgtgtataagttatttctataacaaaagataaaataaagtcaaattgttttcatttaagctataag 49517075  T

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Target: chr1; HSP #8
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 385 - 465
Target Start/End: Complemental strand, 44032145 - 44032065
Alignment:
Q  385 ttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataa 465  Q
    |||||||| |||||||||||||||||   ||| | || |||||| ||||||||||||||||| ||||||||||| ||||||    
T  44032145 ttatcatataagtgtttatgtataagccgtttctataacaaaagctaaaataaagtcaaattgttttcatataagctataa 44032065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 397 - 465
Target Start/End: Complemental strand, 48830210 - 48830142
Alignment:
Q  397 tgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataa 465  Q
    |||||||||||||||||||| | |  | |||||||||||||||||||| ||||||||||||| ||||||    
T  48830210 tgtttatgtataagttatttctattaccaaagataaaataaagtcaaactattttcatataagctataa 48830142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 389 - 446
Target Start/End: Original strand, 289168 - 289225
Alignment:
Q  389 catacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaatt 446  Q
    |||| ||||| ||| ||||||| |||||||||| ||||||||||||||||||||||||    
T  289168 catataagtgcttaagtataagctatttttgtagcaaaagataaaataaagtcaaatt 289225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 388 - 469
Target Start/End: Original strand, 17269177 - 17269258
Alignment:
Q  388 tcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataagttg 469  Q
    ||||| ||||| ||||||||||||||||| |  | ||||||  |||||||||||||||| ||||||||||| | ||||||||    
T  17269177 tcatataagtgcttatgtataagttatttctagaacaaaagtgaaaataaagtcaaattgttttcatataagcaataagttg 17269258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 400 - 469
Target Start/End: Complemental strand, 29007847 - 29007778
Alignment:
Q  400 ttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataagttg 469  Q
    |||||| |||||||||| | || ||||||| ||| |||||||||| ||||||||||||| ||||||||||    
T  29007847 ttatgtctaagttatttctataacaaaagaaaaattaaagtcaaactattttcatataagctataagttg 29007778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 377 - 465
Target Start/End: Complemental strand, 43372113 - 43372025
Alignment:
Q  377 ataagcgcttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataa 465  Q
    |||||||||||||||| ||  | ||||||||| | ||||| | || ||| |||||||||| |||||||||||||||| |||| ||||||    
T  43372113 ataagcgcttatcatataatggcttatgtataggctatttctataacaatagataaaatagagtcaaattattttcacataagctataa 43372025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 377 - 440
Target Start/End: Complemental strand, 16982090 - 16982027
Alignment:
Q  377 ataagcgcttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagt 440  Q
    ||||| |||||||||| |||||||||||||||| ||||||   || ||||||||||||||||||    
T  16982090 ataagagcttatcatataagtgtttatgtataacttatttcgataacaaaagataaaataaagt 16982027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 396 - 463
Target Start/End: Complemental strand, 29794057 - 29793991
Alignment:
Q  396 gtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctat 463  Q
    ||||||||||||| | |||||||||| ||||||||||||| |||||||||| |||||| |||| ||||    
T  29794057 gtgtttatgtataggctatttttgtaacaaaagataaaat-aagtcaaattgttttcaaataagctat 29793991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 377 - 464
Target Start/End: Original strand, 50998468 - 50998555
Alignment:
Q  377 ataagcgcttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctata 464  Q
    ||||||| |||||||| | | | ||||||||||| ||||| |||| |||||||||||| ||| ||||| || |||||||||| |||||    
T  50998468 ataagcgtttatcatataggcgcttatgtataagctatttctgtaacaaaagataaaacaaaatcaaactactttcatataagctata 50998555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 423 - 465
Target Start/End: Complemental strand, 27738288 - 27738246
Alignment:
Q  423 caaaagataaaataaagtcaaattattttcatataacctataa 465  Q
    |||||||||||||||||||||||| ||||||||||| ||||||    
T  27738288 caaaagataaaataaagtcaaattgttttcatataagctataa 27738246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 423 - 469
Target Start/End: Original strand, 30371110 - 30371156
Alignment:
Q  423 caaaagataaaataaagtcaaattattttcatataacctataagttg 469  Q
    |||||||||||||||| ||||||| ||||||||||| ||||||||||    
T  30371110 caaaagataaaataaactcaaattgttttcatataagctataagttg 30371156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 385 - 451
Target Start/End: Complemental strand, 33339566 - 33339500
Alignment:
Q  385 ttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattatttt 451  Q
    |||||||| | ||||||||||||||| ||||| | |||||||||||||||| |||| ||| ||||||    
T  33339566 ttatcatataggtgtttatgtataagctatttctataccaaaagataaaatgaagttaaactatttt 33339500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 396 - 465
Target Start/End: Complemental strand, 4256177 - 4256108
Alignment:
Q  396 gtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataa 465  Q
    ||||||||||||||| ||||| |  | ||||||||| |||||||| ||||||||||| ||||| ||||||    
T  4256177 gtgtttatgtataagctatttctacaacaaaagatacaataaagttaaattattttcgtataagctataa 4256108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 424 - 469
Target Start/End: Complemental strand, 7218181 - 7218136
Alignment:
Q  424 aaaagataaaataaagtcaaattattttcatataacctataagttg 469  Q
    ||||| ||||||||||||||||| ||||||||||| ||||||||||    
T  7218181 aaaaggtaaaataaagtcaaattgttttcatataagctataagttg 7218136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 408 - 465
Target Start/End: Complemental strand, 44936713 - 44936656
Alignment:
Q  408 aagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataa 465  Q
    ||||||||| | || |||||||||| ||||||||||| ||||||||||||| ||||||    
T  44936713 aagttatttctataacaaaagataagataaagtcaaactattttcatataagctataa 44936656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 385 - 458
Target Start/End: Complemental strand, 46980275 - 46980202
Alignment:
Q  385 ttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataa 458  Q
    |||||||| |||||  |||| ||||||| ||||| || ||||||||||||||||| |||| | |||||||||||    
T  46980275 ttatcatataagtgcatatgcataagttgtttttatatcaaaagataaaataaagacaaactgttttcatataa 46980202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 384 - 469
Target Start/End: Original strand, 49557064 - 49557149
Alignment:
Q  384 cttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataagttg 469  Q
    ||||||||| ||||| |  |||||||||||||| | || |||||||||||||||||| ||||  | ||||| ||| ||||||||||    
T  49557064 cttatcatataagtgctgctgtataagttatttctataacaaaagataaaataaagttaaatagtattcatttaagctataagttg 49557149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 380 - 465
Target Start/End: Original strand, 52286597 - 52286682
Alignment:
Q  380 agcgcttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataa 465  Q
    ||||||||||||| ||| | ||||| ||||| ||||| |  | |||||||||||||||||| |||  |||||||||||| ||||||    
T  52286597 agcgcttatcatataagcgcttatgaataagatatttctacaacaaaagataaaataaagttaaacaattttcatataagctataa 52286682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 394 - 458
Target Start/End: Complemental strand, 1233029 - 1232965
Alignment:
Q  394 aagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataa 458  Q
    ||||||||||| ||||| | ||||| || ||||| |||||||||||| ||||||||||| |||||    
T  1233029 aagtgtttatgcataagctgtttttataacaaaacataaaataaagttaaattattttcgtataa 1232965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 394 - 450
Target Start/End: Original strand, 1730825 - 1730881
Alignment:
Q  394 aagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattt 450  Q
    ||||| ||||||||||| ||||||| || | |||||||||||||||||||| |||||    
T  1730825 aagtgcttatgtataagctatttttttaaccaaagataaaataaagtcaaactattt 1730881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 423 - 463
Target Start/End: Original strand, 10439648 - 10439688
Alignment:
Q  423 caaaagataaaataaagtcaaattattttcatataacctat 463  Q
    ||||||||||||| |||||||||||||||||||||| ||||    
T  10439648 caaaagataaaatgaagtcaaattattttcatataagctat 10439688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 378 - 438
Target Start/End: Complemental strand, 11218235 - 11218175
Alignment:
Q  378 taagcgcttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaa 438  Q
    |||||| |||||||| ||||||||||||||||||||||| | |  |||||||| |||||||    
T  11218235 taagcgtttatcatataagtgtttatgtataagttatttatatgtcaaaagattaaataaa 11218175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 394 - 458
Target Start/End: Complemental strand, 11560686 - 11560622
Alignment:
Q  394 aagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataa 458  Q
    ||||||||| ||||||| ||||||| || ||||||||||||| || ||||||| |||| ||||||    
T  11560686 aagtgtttaggtataagctatttttatagcaaaagataaaatcaaatcaaattgtttttatataa 11560622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 407 - 455
Target Start/End: Complemental strand, 14737829 - 14737781
Alignment:
Q  407 taagttatttttgtaccaaaagataaaataaagtcaaattattttcata 455  Q
    |||||||||| | || |||||||||||||||||||||||| ||||||||    
T  14737829 taagttatttctataacaaaagataaaataaagtcaaattgttttcata 14737781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 426 - 466
Target Start/End: Original strand, 15361678 - 15361718
Alignment:
Q  426 aagataaaataaagtcaaattattttcatataacctataag 466  Q
    |||||||| |||||||||||||||||||||||| |||||||    
T  15361678 aagataaagtaaagtcaaattattttcatataagctataag 15361718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 377 - 465
Target Start/End: Original strand, 17420119 - 17420207
Alignment:
Q  377 ataagcgcttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataa 465  Q
    ||||||||||| || | ||||  ||||||||||  ||||||| ||  |||||||||||||||||| ||  |||||||||||| ||||||    
T  17420119 ataagcgcttagcacataagtacttatgtataaactatttttataagaaaagataaaataaagtcgaacaattttcatataagctataa 17420207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 377 - 457
Target Start/End: Original strand, 23895252 - 23895332
Alignment:
Q  377 ataagcgcttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatata 457  Q
    |||||| ||||||||| ||||  ||||||||||| ||||| | || |||||||||||||||| ||||| | || |||||||    
T  23895252 ataagcccttatcatataagttattatgtataagctatttctataacaaaagataaaataaattcaaactgttctcatata 23895332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 426 - 478
Target Start/End: Original strand, 29723454 - 29723506
Alignment:
Q  426 aagataaaataaagtcaaattattttcatataacctataagttgcttacacaa 478  Q
    ||||||||||||| ||||| ||||||||||||  ||||||||||||| |||||    
T  29723454 aagataaaataaactcaaactattttcatatatgctataagttgctttcacaa 29723506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 400 - 448
Target Start/End: Original strand, 36641814 - 36641862
Alignment:
Q  400 ttatgtataagttatttttgtaccaaaagataaaataaagtcaaattat 448  Q
    |||| |||||||||||| | || ||||||||||||||||||||||||||    
T  36641814 ttatatataagttatttctataacaaaagataaaataaagtcaaattat 36641862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 382 - 458
Target Start/End: Original strand, 42336583 - 42336659
Alignment:
Q  382 cgcttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataa 458  Q
    |||| ||||||  |||| ||||||||| ||||||||| || ||||| |||||||||||||||   ||||||||||||    
T  42336583 cgctcatcatattagtgcttatgtataggttatttttataacaaaaaataaaataaagtcaagcaattttcatataa 42336659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 400 - 463
Target Start/End: Original strand, 4215311 - 4215374
Alignment:
Q  400 ttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctat 463  Q
    |||| |||||||||||||  || |||| ||||||||||||||||| | ||||||||||| ||||    
T  4215311 ttatatataagttattttgatagcaaatgataaaataaagtcaaactgttttcatataaactat 4215374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 423 - 466
Target Start/End: Original strand, 9656612 - 9656655
Alignment:
Q  423 caaaagataaaataaagtcaaattattttcatataacctataag 466  Q
    ||||| |||||||||||| ||||||||||||||||| |||||||    
T  9656612 caaaaaataaaataaagttaaattattttcatataagctataag 9656655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 430 - 469
Target Start/End: Complemental strand, 25006135 - 25006096
Alignment:
Q  430 taaaataaagtcaaattattttcatataacctataagttg 469  Q
    ||||||||||||||||| ||||||||||| ||||||||||    
T  25006135 taaaataaagtcaaattgttttcatataagctataagttg 25006096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 399 - 458
Target Start/End: Complemental strand, 36151637 - 36151578
Alignment:
Q  399 tttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataa 458  Q
    |||||||||||| |||||   || |||||||||||||||||||||||| ||||| |||||    
T  36151637 tttatgtataagctatttcaataacaaaagataaaataaagtcaaattgttttcgtataa 36151578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 424 - 455
Target Start/End: Original strand, 45234160 - 45234191
Alignment:
Q  424 aaaagataaaataaagtcaaattattttcata 455  Q
    ||||||||||||||||||||||||||||||||    
T  45234160 aaaagataaaataaagtcaaattattttcata 45234191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 423 - 466
Target Start/End: Original strand, 47877084 - 47877127
Alignment:
Q  423 caaaagataaaataaagtcaaattattttcatataacctataag 466  Q
    |||||||||||||||| ||||||| ||||||||||| |||||||    
T  47877084 caaaagataaaataaaatcaaattgttttcatataaactataag 47877127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 400 - 455
Target Start/End: Original strand, 50319231 - 50319286
Alignment:
Q  400 ttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcata 455  Q
    ||||||||||| ||||| | || ||||||||||||||||||||| || ||||||||    
T  50319231 ttatgtataagctatttctataacaaaagataaaataaagtcaagttgttttcata 50319286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 423 - 469
Target Start/End: Complemental strand, 5422028 - 5421982
Alignment:
Q  423 caaaagataaaataaagtcaaattattttcatataacctataagttg 469  Q
    |||||||||||||| ||||||||| ||||| ||||| ||||||||||    
T  5422028 caaaagataaaatatagtcaaattgttttcttataagctataagttg 5421982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 378 - 443
Target Start/End: Complemental strand, 4202282 - 4202217
Alignment:
Q  378 taagcgcttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaa 443  Q
    |||||| |||||||| ||||| ||| ||||||||||||| | || |||||||||||  ||||||||    
T  4202282 taagcgtttatcatataagtgcttaagtataagttatttctataacaaaagataaaccaaagtcaa 4202217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 377 - 454
Target Start/End: Original strand, 4304277 - 4304354
Alignment:
Q  377 ataagcgcttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcat 454  Q
    |||||||||||||||| || ||||||| |||||||  ||| || | |||| |||||||| |||||||| | |||||||    
T  4304277 ataagcgcttatcatataactgtttatatataagtcgtttctgcaacaaacgataaaattaagtcaaaatcttttcat 4304354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 424 - 469
Target Start/End: Complemental strand, 5592792 - 5592747
Alignment:
Q  424 aaaagataaaataaagtcaaattattttcatataacctataagttg 469  Q
    |||||||||||||||||| |||| || |||||||| ||||||||||    
T  5592792 aaaagataaaataaagtcgaattgttgtcatataagctataagttg 5592747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 402 - 455
Target Start/End: Complemental strand, 6933090 - 6933037
Alignment:
Q  402 atgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcata 455  Q
    |||||||||  |||||| || ||||| |||||||||||||||||| ||||||||    
T  6933090 atgtataagccatttttataacaaaacataaaataaagtcaaattgttttcata 6933037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 383 - 444
Target Start/End: Original strand, 10854655 - 10854716
Alignment:
Q  383 gcttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaa 444  Q
    |||||||||| ||||| ||||| ||||||||||| || |  | |||||||||||||||||||    
T  10854655 gcttatcatataagtggttatgaataagttatttctgaaatacaagataaaataaagtcaaa 10854716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 405 - 458
Target Start/End: Original strand, 11211062 - 11211115
Alignment:
Q  405 tataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataa 458  Q
    |||||||||||| |  | |||||||||||||||||| ||||| |||||||||||    
T  11211062 tataagttatttctagaacaaaagataaaataaagttaaatttttttcatataa 11211115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 378 - 458
Target Start/End: Complemental strand, 30815789 - 30815708
Alignment:
Q  378 taagcgcttatcatacaagtg-tttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataa 458  Q
    ||||||||||||||| || |  ||||||| |||| | ||| | || |||||||||||||||||| ||| |||||||||||||    
T  30815789 taagcgcttatcatataattactttatgtctaagctttttctataacaaaagataaaataaagttaaactattttcatataa 30815708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 385 - 454
Target Start/End: Original strand, 36602714 - 36602783
Alignment:
Q  385 ttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcat 454  Q
    |||||||| ||||| ||||||||||| ||| | |  | ||| ||||||||||||||||||| ||||||||    
T  36602714 ttatcatataagtgattatgtataagctatatctacaacaatagataaaataaagtcaaatcattttcat 36602783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 377 - 462
Target Start/End: Original strand, 37818380 - 37818465
Alignment:
Q  377 ataagcgcttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataaccta 462  Q
    |||||| |||| || | ||||| ||||||||||||||||| | || ||| ||||||||  |||||||| ||||||| |||| ||||    
T  37818380 ataagcacttaccaaataagtgcttatgtataagttatttctataacaagagataaaacgaagtcaaactattttcgtatatccta 37818465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 377 - 442
Target Start/End: Original strand, 44940259 - 44940324
Alignment:
Q  377 ataagcgcttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtca 442  Q
    |||| ||||||||||| || ||  ||||||||  |||||||| || ||||||||||||||||||||    
T  44940259 ataatcgcttatcatataattgcgtatgtatagcttatttttatagcaaaagataaaataaagtca 44940324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 424 - 469
Target Start/End: Original strand, 45205031 - 45205076
Alignment:
Q  424 aaaagataaaataaagtcaaattattttcatataacctataagttg 469  Q
    ||||||||||||||||||||| ||||| ||||||| ||| ||||||    
T  45205031 aaaagataaaataaagtcaaactatttccatataagctagaagttg 45205076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 394 - 458
Target Start/End: Original strand, 27140418 - 27140482
Alignment:
Q  394 aagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataa 458  Q
    |||||||||||| |||||||||| | || |||||||||||||||  | ||||| |||| ||||||    
T  27140418 aagtgtttatgtgtaagttatttctataacaaaagataaaataatattaaattgtttttatataa 27140482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 405 - 457
Target Start/End: Complemental strand, 38867959 - 38867907
Alignment:
Q  405 tataagttatttttgtaccaaaagataaaataaagtcaaattattttcatata 457  Q
    |||||| ||||| | ||||||||||| ||||||||||||| | ||||||||||    
T  38867959 tataagctatttctataccaaaagattaaataaagtcaaaatgttttcatata 38867907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 378 - 454
Target Start/End: Complemental strand, 40358039 - 40357963
Alignment:
Q  378 taagcgcttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcat 454  Q
    |||| |||||| ||| |||||  |||||||||| ||||| | || |||  ||||||||||||||||||| |||||||    
T  40358039 taagtgcttattatataagtgactatgtataagctatttctataacaatggataaaataaagtcaaattgttttcat 40357963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 423 - 463
Target Start/End: Complemental strand, 41516188 - 41516148
Alignment:
Q  423 caaaagataaaataaagtcaaattattttcatataacctat 463  Q
    |||||||||||| ||||||||| ||||||||||||| ||||    
T  41516188 caaaagataaaagaaagtcaaactattttcatataagctat 41516148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 378 - 442
Target Start/End: Complemental strand, 41638463 - 41638399
Alignment:
Q  378 taagcgcttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtca 442  Q
    ||||| ||||||||| ||||| |||||||||| |||||| |  | || |||||||||||||||||    
T  41638463 taagcacttatcatataagtgcttatgtataatttatttatagaacacaagataaaataaagtca 41638399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 386 - 458
Target Start/End: Original strand, 45107548 - 45107619
Alignment:
Q  386 tatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataa 458  Q
    ||||||| ||||| |||| |||||| ||||| | ||  |||| |||||||||||||||| |||||||||||||    
T  45107548 tatcatataagtgcttatctataagctatttctataagaaaa-ataaaataaagtcaaactattttcatataa 45107619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 381 - 452
Target Start/End: Original strand, 48282053 - 48282125
Alignment:
Q  381 gcgcttatcatacaagtgtttatgtataagttatttttgtacca-aaagataaaataaagtcaaattattttc 452  Q
    |||||||||||| ||||| ||||||| ||| ||||| | ||  | |||||||||||||||||||| |||||||    
T  48282053 gcgcttatcatataagtgcttatgtaaaagctatttctataaaagaaagataaaataaagtcaaactattttc 48282125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 402 - 458
Target Start/End: Complemental strand, 52559957 - 52559901
Alignment:
Q  402 atgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataa 458  Q
    |||||||| |||| | | || ||||| |||||||||||||||||||||||| |||||    
T  52559957 atgtataaattatatctataacaaaatataaaataaagtcaaattattttcgtataa 52559901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 50; Significance: 3e-19; HSPs: 72)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 398 - 455
Target Start/End: Original strand, 8680929 - 8680986
Alignment:
Q  398 gtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcata 455  Q
    |||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||    
T  8680929 gtttatgtataagttatttttgtaacaaaagatataataaagtcaaattattttcata 8680986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 383 - 468
Target Start/End: Original strand, 49060462 - 49060547
Alignment:
Q  383 gcttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataagtt 468  Q
    |||||||||| |||| |||||||||||| ||||| | || ||||| ||||||||||||||||||||||| |||||| |||||||||    
T  49060462 gcttatcatataagtatttatgtataagctatttctataacaaaaaataaaataaagtcaaattatttttatataagctataagtt 49060547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 377 - 458
Target Start/End: Original strand, 30133967 - 30134046
Alignment:
Q  377 ataagcgcttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataa 458  Q
    ||||||||||||||||  |||||||||||||||| |||||||  | ||||||||||||||||||||| || ||||| |||||    
T  30133967 ataagcgcttatcata--agtgtttatgtataagctatttttacaacaaaagataaaataaagtcaacttgttttcgtataa 30134046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 379 - 469
Target Start/End: Original strand, 30496622 - 30496712
Alignment:
Q  379 aagcgcttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataagttg 469  Q
    |||||| ||||| | ||||||||||||||||  ||||| | || ||||| |||||||||||||||||| ||||| ||||||||||| ||||    
T  30496622 aagcgcatatcacataagtgtttatgtataaactatttctataacaaaatataaaataaagtcaaattgttttcgtataacctataggttg 30496712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 400 - 469
Target Start/End: Complemental strand, 45813311 - 45813242
Alignment:
Q  400 ttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataagttg 469  Q
    |||| |||||| ||||| | |||||||||||||||||||||||| || ||||||||||| ||||||||||    
T  45813311 ttatttataagctatttctataccaaaagataaaataaagtcaacttgttttcatataatctataagttg 45813242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 385 - 457
Target Start/End: Original strand, 30751441 - 30751513
Alignment:
Q  385 ttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatata 457  Q
    |||||||| ||||| || || ||||  |||||||||| ||||| |||||||||||||||||||||||||||||    
T  30751441 ttatcatataagtgcttgtgaataaactatttttgtaacaaaatataaaataaagtcaaattattttcatata 30751513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 398 - 469
Target Start/End: Original strand, 1417201 - 1417272
Alignment:
Q  398 gtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataagttg 469  Q
    ||||||||||||  ||||| | || |||||||||||||||||||||||| ||||||||||| | ||||||||    
T  1417201 gtttatgtataaactatttatataacaaaagataaaataaagtcaaattgttttcatataagcaataagttg 1417272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 382 - 469
Target Start/End: Original strand, 44241781 - 44241867
Alignment:
Q  382 cgcttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataagttg 469  Q
    ||||||||||| |||||| |||||||||||||||| | || ||| ||||||||||||||  || ||||||  ||||||||||||||||    
T  44241781 cgcttatcatataagtgtgtatgtataagttatttctataacaacagataaaataaagt-taactatttttgtataacctataagttg 44241867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 395 - 465
Target Start/End: Original strand, 23918891 - 23918961
Alignment:
Q  395 agtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataa 465  Q
    ||||||||||| |||||||| | | |  |||||||||||||||||||||||| ||||||||||| ||||||    
T  23918891 agtgtttatgtgtaagttatctctattacaaaagataaaataaagtcaaattgttttcatataagctataa 23918961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 376 - 458
Target Start/End: Complemental strand, 27121741 - 27121659
Alignment:
Q  376 aataagcgcttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataa 458  Q
    ||||||||||||||||| || |  ||||||||||| ||||| | ||  ||| ||||||||||||||||||| |||||||||||    
T  27121741 aataagcgcttatcatataattccttatgtataagatatttctataataaatgataaaataaagtcaaattgttttcatataa 27121659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 380 - 458
Target Start/End: Original strand, 35536026 - 35536104
Alignment:
Q  380 agcgcttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataa 458  Q
    ||||||||||||| ||  | ||||||||||| ||||| | || || ||||||||||||||||||||| |||||||||||    
T  35536026 agcgcttatcatataaaggcttatgtataagctatttctataacataagataaaataaagtcaaattgttttcatataa 35536104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 394 - 444
Target Start/End: Original strand, 39505890 - 39505940
Alignment:
Q  394 aagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaa 444  Q
    |||||||||||||||||||||||||||| |||||||| ||||| |||||||    
T  39505890 aagtgtttatgtataagttatttttgtagcaaaagattaaatagagtcaaa 39505940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 384 - 469
Target Start/End: Complemental strand, 9527237 - 9527152
Alignment:
Q  384 cttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataagttg 469  Q
    ||||||||||||||| |||| |||| | ||| | | || ||||||||| |||||||||||| | ||||||||||| ||||||||||    
T  9527237 cttatcatacaagtgcttatatatacgctatatctataacaaaagatataataaagtcaaactgttttcatataaactataagttg 9527152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 405 - 458
Target Start/End: Complemental strand, 39591593 - 39591540
Alignment:
Q  405 tataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataa 458  Q
    |||||||||||| | || |||||||||||||||||||||||| |||||||||||    
T  39591593 tataagttatttctataacaaaagataaaataaagtcaaattgttttcatataa 39591540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 385 - 458
Target Start/End: Complemental strand, 45593865 - 45593792
Alignment:
Q  385 ttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataa 458  Q
    |||||||| || || ||||||||||| ||||| |||| ||||| |||||||||||||||| | |||||||||||    
T  45593865 ttatcatataaatgcttatgtataagctatttctgtaacaaaacataaaataaagtcaaactgttttcatataa 45593792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 385 - 469
Target Start/End: Complemental strand, 5010614 - 5010530
Alignment:
Q  385 ttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataagttg 469  Q
    ||||||||||||   ||||||  ||||||||| |||| ||||| |||||||||||| |||||||||| ||||||  |||||||||    
T  5010614 ttatcatacaagaagttatgtgcaagttatttatgtaacaaaatataaaataaagtgaaattatttttatataaggtataagttg 5010530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 380 - 466
Target Start/End: Complemental strand, 7453549 - 7453462
Alignment:
Q  380 agcgcttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaa-ttattttcatataacctataag 466  Q
    |||| |||||||| ||| ||| ||||||||| | ||| | || |||||||||||||||||||||| || ||||||||||| |||||||    
T  7453549 agcgtttatcataaaagggttcatgtataagatttttctatagcaaaagataaaataaagtcaaatttgttttcatataagctataag 7453462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 394 - 465
Target Start/End: Original strand, 28165024 - 28165095
Alignment:
Q  394 aagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataa 465  Q
    ||||| ||||||||||||| ||| | || ||||||||||||| |||||||||| |||| |||||| ||||||    
T  28165024 aagtgcttatgtataagttctttctataacaaaagataaaatgaagtcaaattgttttaatataagctataa 28165095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 423 - 466
Target Start/End: Original strand, 31002723 - 31002766
Alignment:
Q  423 caaaagataaaataaagtcaaattattttcatataacctataag 466  Q
    |||||||||||||||||||||| ||||||||||||| |||||||    
T  31002723 caaaagataaaataaagtcaaaatattttcatataagctataag 31002766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 377 - 444
Target Start/End: Original strand, 31341110 - 31341177
Alignment:
Q  377 ataagcgcttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaa 444  Q
    |||||||||||||||  || || ||||||||||| ||||| | || ||||||||||||||||||||||    
T  31341110 ataagcgcttatcatctaaatgcttatgtataagctatttgtataacaaaagataaaataaagtcaaa 31341177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 423 - 466
Target Start/End: Complemental strand, 40689094 - 40689051
Alignment:
Q  423 caaaagataaaataaagtcaaattattttcatataacctataag 466  Q
    |||||||||||||||||| ||||||||||||||||| |||||||    
T  40689094 caaaagataaaataaagttaaattattttcatataagctataag 40689051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 394 - 444
Target Start/End: Original strand, 5939017 - 5939067
Alignment:
Q  394 aagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaa 444  Q
    ||||||||||||||||||||||||| || ||||| || |||||||||||||    
T  5939017 aagtgtttatgtataagttatttttataacaaaaaattaaataaagtcaaa 5939067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 385 - 455
Target Start/End: Original strand, 7244626 - 7244696
Alignment:
Q  385 ttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcata 455  Q
    |||||||| ||||| ||||||||||| ||||| | || |||||||||||| ||||||||| | ||||||||    
T  7244626 ttatcatataagtgcttatgtataagctatttctatatcaaaagataaaagaaagtcaaactgttttcata 7244696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 385 - 458
Target Start/End: Original strand, 991994 - 992067
Alignment:
Q  385 ttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataa 458  Q
    |||||||| ||||| ||| ||||||||| ||| | || ||||| ||||||||||| |||| |||||||||||||    
T  991994 ttatcatataagtgcttacgtataagttgtttctataacaaaaaataaaataaagacaaaatattttcatataa 992067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 400 - 469
Target Start/End: Complemental strand, 3501097 - 3501028
Alignment:
Q  400 ttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataagttg 469  Q
    ||||||||||| || || | ||  |||||||||||||||||||||| ||||||||||||  |||||||||    
T  3501097 ttatgtataagctaattatataataaaagataaaataaagtcaaatcattttcatataaaatataagttg 3501028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 372 - 469
Target Start/End: Original strand, 5373136 - 5373233
Alignment:
Q  372 taaaaataagcgcttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataagttg 469  Q
    ||||| |||| |||||||||  ||||| ||||||||| | ||||| | || ||||||||||||||||||| ||  ||||| ||||||  |||||||||    
T  5373136 taaaattaagtgcttatcatgtaagtgcttatgtatatgctatttctataacaaaagataaaataaagtccaaacatttttatataagttataagttg 5373233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 385 - 458
Target Start/End: Original strand, 22759110 - 22759183
Alignment:
Q  385 ttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataa 458  Q
    |||||||| ||| |||||||| |||| ||||| | || |||||||||||||||||  ||||| |||||||||||    
T  22759110 ttatcatataagcgtttatgtttaagctatttgtataacaaaagataaaataaaggaaaattgttttcatataa 22759183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 383 - 468
Target Start/End: Original strand, 25511549 - 25511634
Alignment:
Q  383 gcttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataagtt 468  Q
    |||||||||| |||||||  ||||||| |||||| | || |||||||| |||||||||||| || |||| ||||||  ||||||||    
T  25511549 gcttatcatataagtgttgttgtataaattatttctataacaaaagatgaaataaagtcaatttttttttatataagatataagtt 25511634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 385 - 466
Target Start/End: Original strand, 47004011 - 47004092
Alignment:
Q  385 ttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataag 466  Q
    |||||||| |||||||||| | |||| ||||| | || ||| |||||||||||||||||| |||||| |||| | |||||||    
T  47004011 ttatcatataagtgtttatatgtaagctatttctataacaatagataaaataaagtcaaactatttttatatgaactataag 47004092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 377 - 445
Target Start/End: Complemental strand, 1431462 - 1431394
Alignment:
Q  377 ataagcgcttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaat 445  Q
    ||||| |||||||||| |||||||||||||||||||||||   ||   ||| |||||||||||||||||    
T  1431462 ataagtgcttatcatataagtgtttatgtataagttatttccataatgaaaaataaaataaagtcaaat 1431394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 400 - 463
Target Start/End: Complemental strand, 1432098 - 1432032
Alignment:
Q  400 ttatgtataagttatttttgtaccaaaagataaaat---aaagtcaaattattttcatataacctat 463  Q
    ||||||||||||||||| | || |||||||||||||   ||||| ||||||||||||||||| ||||    
T  1432098 ttatgtataagttatttctataacaaaagataaaataaaaaagttaaattattttcatataagctat 1432032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 384 - 456
Target Start/End: Original strand, 2223071 - 2223143
Alignment:
Q  384 cttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatat 456  Q
    |||||| || ||||||||||||||||| ||||| | || |||||||||||  ||||||||||| |||| ||||    
T  2223071 cttatcgtataagtgtttatgtataagctatttctataacaaaagataaagaaaagtcaaattgtttttatat 2223143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 423 - 467
Target Start/End: Complemental strand, 30456558 - 30456514
Alignment:
Q  423 caaaagataaaataaagtcaaattattttcatataacctataagt 467  Q
    |||||||||||||||||||||||| |||||||||||  |||||||    
T  30456558 caaaagataaaataaagtcaaattgttttcatataagttataagt 30456514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 406 - 450
Target Start/End: Original strand, 41875864 - 41875908
Alignment:
Q  406 ataagttatttttgtaccaaaagataaaataaagtcaaattattt 450  Q
    ||||||||||| ||||| |||||||||||||| ||||||||||||    
T  41875864 ataagttatttctgtactaaaagataaaataaggtcaaattattt 41875908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 398 - 478
Target Start/End: Complemental strand, 48157253 - 48157173
Alignment:
Q  398 gtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataagttgcttacacaa 478  Q
    |||||||||||| |||||| | ||  ||||||||||||||||| ||||| |||| |||||| |||||| ||| || |||||    
T  48157253 gtttatgtataacttatttctataataaaagataaaataaagtgaaattgttttaatataagctataatttgttttcacaa 48157173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 423 - 466
Target Start/End: Complemental strand, 12835045 - 12835002
Alignment:
Q  423 caaaagataaaataaagtcaaattattttcatataacctataag 466  Q
    |||||||||||||||||||||||| ||||||||| | |||||||    
T  12835045 caaaagataaaataaagtcaaattgttttcatattagctataag 12835002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 426 - 465
Target Start/End: Complemental strand, 22296333 - 22296294
Alignment:
Q  426 aagataaaataaagtcaaattattttcatataacctataa 465  Q
    ||||||||||||||| ||||||||||| ||||||||||||    
T  22296333 aagataaaataaagttaaattattttcctataacctataa 22296294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 435 - 478
Target Start/End: Original strand, 24895330 - 24895373
Alignment:
Q  435 taaagtcaaattattttcatataacctataagttgcttacacaa 478  Q
    |||||||||||||||||||||||| |||||||||| || |||||    
T  24895330 taaagtcaaattattttcatataagctataagttgttttcacaa 24895373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 385 - 468
Target Start/End: Complemental strand, 27481440 - 27481357
Alignment:
Q  385 ttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataagtt 468  Q
    |||| ||| ||||||||||||||||| ||||| | || |||| |||||||  |||||||| | ||| ||||||| |||||||||    
T  27481440 ttattatataagtgtttatgtataagctatttctataacaaaggataaaacgaagtcaaactgtttccatataagctataagtt 27481357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 392 - 458
Target Start/End: Complemental strand, 5272959 - 5272893
Alignment:
Q  392 acaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataa 458  Q
    |||| |||||||||||||  ||||| | || ||||||||||||| |||||| ||| |||||||||||    
T  5272959 acaactgtttatgtataaactatttatataacaaaagataaaattaagtcacattgttttcatataa 5272893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 394 - 444
Target Start/End: Original strand, 5276157 - 5276207
Alignment:
Q  394 aagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaa 444  Q
    ||||| ||||||||||| ||||||| || |||||||||| |||||||||||    
T  5276157 aagtgcttatgtataagctatttttataacaaaagataacataaagtcaaa 5276207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 435 - 469
Target Start/End: Original strand, 24909638 - 24909672
Alignment:
Q  435 taaagtcaaattattttcatataacctataagttg 469  Q
    |||||||||||||||||||||||| ||||||||||    
T  24909638 taaagtcaaattattttcatataagctataagttg 24909672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 387 - 457
Target Start/End: Original strand, 24973870 - 24973940
Alignment:
Q  387 atcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatata 457  Q
    |||||| ||||| ||||||| ||| ||||| | || |||||||||||||||| ||||||| ||| ||||||    
T  24973870 atcatataagtgcttatgtaaaagctatttctataacaaaagataaaataaattcaaattgtttccatata 24973940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 400 - 453
Target Start/End: Original strand, 31149586 - 31149640
Alignment:
Q  400 ttatgtataag-ttatttttgtaccaaaagataaaataaagtcaaattattttca 453  Q
    ||||||||||| ||||| || || |||||||||||||||||| ||||||||||||    
T  31149586 ttatgtataagcttattattataacaaaagataaaataaagtaaaattattttca 31149640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 400 - 453
Target Start/End: Original strand, 31167878 - 31167932
Alignment:
Q  400 ttatgtataag-ttatttttgtaccaaaagataaaataaagtcaaattattttca 453  Q
    ||||||||||| ||||| || || |||||||||||||||||| ||||||||||||    
T  31167878 ttatgtataagcttattattataacaaaagataaaataaagtaaaattattttca 31167932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 394 - 444
Target Start/End: Complemental strand, 35809041 - 35808991
Alignment:
Q  394 aagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaa 444  Q
    ||||||||||||||||| ||||| | || |||||||||||||| |||||||    
T  35809041 aagtgtttatgtataagctatttctataacaaaagataaaatatagtcaaa 35808991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 399 - 453
Target Start/End: Original strand, 36532289 - 36532343
Alignment:
Q  399 tttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttca 453  Q
    ||||||||||||||||   | || |||||||||||| ||||||||||||||||||    
T  36532289 tttatgtataagttatccctataacaaaagataaaacaaagtcaaattattttca 36532343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 386 - 464
Target Start/End: Complemental strand, 38496659 - 38496583
Alignment:
Q  386 tatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctata 464  Q
    ||||||||||||| |||  ||||||||| |||| || ||||| |||||||||| ||||| | |||||||||||||||||    
T  38496659 tatcatacaagtgcttacatataagtta-ttttataacaaaacataaaataaa-tcaaactgttttcatataacctata 38496583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 423 - 469
Target Start/End: Complemental strand, 45777279 - 45777233
Alignment:
Q  423 caaaagataaaataaagtcaaattattttcatataacctataagttg 469  Q
    ||||||||||||| |||||||| | ||||||||||| ||||||||||    
T  45777279 caaaagataaaattaagtcaaactgttttcatataaactataagttg 45777233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 424 - 458
Target Start/End: Original strand, 46825061 - 46825095
Alignment:
Q  424 aaaagataaaataaagtcaaattattttcatataa 458  Q
    ||||||||||||||||||||||| |||||||||||    
T  46825061 aaaagataaaataaagtcaaattgttttcatataa 46825095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 423 - 452
Target Start/End: Original strand, 3635927 - 3635956
Alignment:
Q  423 caaaagataaaataaagtcaaattattttc 452  Q
    ||||||||||||||||||||||||||||||    
T  3635927 caaaagataaaataaagtcaaattattttc 3635956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 401 - 458
Target Start/End: Complemental strand, 5006639 - 5006582
Alignment:
Q  401 tatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataa 458  Q
    |||||||||| ||||  | || |||||||||||||||||||||| | |||||||||||    
T  5006639 tatgtataagctattcctataacaaaagataaaataaagtcaaactgttttcatataa 5006582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 401 - 458
Target Start/End: Original strand, 7623078 - 7623135
Alignment:
Q  401 tatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataa 458  Q
    |||||||||||||||||| || |||||| |||||||||||| || | |||| ||||||    
T  7623078 tatgtataagttatttttataacaaaaggtaaaataaagtccaactctttttatataa 7623135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 385 - 450
Target Start/End: Original strand, 8445210 - 8445275
Alignment:
Q  385 ttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattt 450  Q
    |||||||| ||||| || | |||||| ||||||| || ||||||||||||||||| ||||| ||||    
T  8445210 ttatcatataagtgcttgtttataagctatttttataacaaaagataaaataaagacaaatgattt 8445275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 385 - 466
Target Start/End: Original strand, 27548187 - 27548268
Alignment:
Q  385 ttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataag 466  Q
    ||||| || ||||| |||| |||||| |||||   || ||||||||||||||||||| |||| ||||||| ||| |||||||    
T  27548187 ttatcttataagtgcttatctataagctatttccttagcaaaagataaaataaagtctaattgttttcatttaagctataag 27548268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 397 - 458
Target Start/End: Complemental strand, 27626258 - 27626197
Alignment:
Q  397 tgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataa 458  Q
    |||||||||||||| ||||| | || |||||| ||||||||||||||| |||| | ||||||    
T  27626258 tgtttatgtataagctatttctatatcaaaagctaaaataaagtcaaactattattatataa 27626197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 402 - 455
Target Start/End: Original strand, 28178910 - 28178963
Alignment:
Q  402 atgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcata 455  Q
    ||||||||| ||||| | || |||||||||||||||||||| ||| ||||||||    
T  28178910 atgtataagctatttctataacaaaagataaaataaagtcatattgttttcata 28178963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 400 - 469
Target Start/End: Complemental strand, 28613665 - 28613596
Alignment:
Q  400 ttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataagttg 469  Q
    ||||||||||| ||||||| || |||||||||||| ||||| ||||| ||||  |||||  |||||||||    
T  28613665 ttatgtataagctatttttataacaaaagataaaacaaagttaaattgtttttgtataagttataagttg 28613596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 378 - 443
Target Start/End: Complemental strand, 29574754 - 29574689
Alignment:
Q  378 taagcgcttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaa 443  Q
    |||||| |||||||| || || ||||||||||| ||||||| |  |||||||| ||||||||||||    
T  29574754 taagcgtttatcatataaatgcttatgtataagctatttttatgacaaaagatgaaataaagtcaa 29574689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 384 - 465
Target Start/End: Complemental strand, 39551695 - 39551614
Alignment:
Q  384 cttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataa 465  Q
    ||||||||| |||| |||| ||||||| ||||| | || ||||||||| | |||||| ||| | ||||||||||| ||||||    
T  39551695 cttatcatataagtatttaagtataagctatttctataacaaaagatatactaaagtaaaactgttttcatataagctataa 39551614  T

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Target: chr7; HSP #61
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 424 - 465
Target Start/End: Original strand, 40428518 - 40428559
Alignment:
Q  424 aaaagataaaataaagtcaaattattttcatataacctataa 465  Q
    |||| |||||||||||| ||||||||||||||||| ||||||    
T  40428518 aaaaaataaaataaagttaaattattttcatataagctataa 40428559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 401 - 457
Target Start/End: Complemental strand, 1373670 - 1373614
Alignment:
Q  401 tatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatata 457  Q
    |||||| ||||||||||| |  ||||||||||| |||||||||| | ||||||||||    
T  1373670 tatgtaaaagttatttttatgacaaaagataaattaaagtcaaacttttttcatata 1373614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 394 - 450
Target Start/End: Original strand, 5269463 - 5269519
Alignment:
Q  394 aagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattt 450  Q
    ||||| |||| ||||| |||||| | ||  |||||||||||||||||||||||||||    
T  5269463 aagtgcttatatataaattatttctttaataaaagataaaataaagtcaaattattt 5269519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 394 - 438
Target Start/End: Complemental strand, 14823982 - 14823938
Alignment:
Q  394 aagtgtttatgtataagttatttttgtaccaaaagataaaataaa 438  Q
    ||||| ||| ||||||||||||| |||| ||||||||||||||||    
T  14823982 aagtgcttaggtataagttatttatgtaacaaaagataaaataaa 14823938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 394 - 438
Target Start/End: Complemental strand, 15270989 - 15270945
Alignment:
Q  394 aagtgtttatgtataagttatttttgtaccaaaagataaaataaa 438  Q
    ||||| ||| ||||||||||||| |||| ||||||||||||||||    
T  15270989 aagtgcttaggtataagttatttatgtaacaaaagataaaataaa 15270945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 390 - 446
Target Start/End: Complemental strand, 20476651 - 20476595
Alignment:
Q  390 atacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaatt 446  Q
    |||||||||| |||| ||||||||||| | |  |||||||||||||||| |||||||    
T  20476651 atacaagtgtgtatgcataagttatttctattgcaaaagataaaataaattcaaatt 20476595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 394 - 430
Target Start/End: Original strand, 25507284 - 25507320
Alignment:
Q  394 aagtgtttatgtataagttatttttgtaccaaaagat 430  Q
    ||||||||||||||||||||||| | |||||||||||    
T  25507284 aagtgtttatgtataagttatttctataccaaaagat 25507320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 394 - 430
Target Start/End: Complemental strand, 25558326 - 25558290
Alignment:
Q  394 aagtgtttatgtataagttatttttgtaccaaaagat 430  Q
    ||||||||||||||||||||||| | |||||||||||    
T  25558326 aagtgtttatgtataagttatttctataccaaaagat 25558290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 394 - 430
Target Start/End: Complemental strand, 25558524 - 25558488
Alignment:
Q  394 aagtgtttatgtataagttatttttgtaccaaaagat 430  Q
    ||||||||||||||||||||||| | |||||||||||    
T  25558524 aagtgtttatgtataagttatttctataccaaaagat 25558488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 394 - 458
Target Start/End: Original strand, 33894556 - 33894619
Alignment:
Q  394 aagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataa 458  Q
    ||||| ||||||||||| ||||| | || ||||||||||||| |||||||| | |||||||||||    
T  33894556 aagtgcttatgtataagctatttctataacaaaagataaaat-aagtcaaactgttttcatataa 33894619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #71
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 406 - 466
Target Start/End: Original strand, 38010659 - 38010719
Alignment:
Q  406 ataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataag 466  Q
    |||| ||||||||  | |||||||||||| |||| |||||| ||||||||||| |||||||    
T  38010659 ataaattatttttaaaacaaaagataaaacaaagccaaattgttttcatataagctataag 38010719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #72
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 426 - 466
Target Start/End: Complemental strand, 39908099 - 39908059
Alignment:
Q  426 aagataaaataaagtcaaattattttcatataacctataag 466  Q
    |||||||||||||||||||| ||| |||||||| |||||||    
T  39908099 aagataaaataaagtcaaataattatcatataagctataag 39908059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0590 (Bit Score: 41; Significance: 0.00000000000006; HSPs: 1)
Name: scaffold0590
Description:

Target: scaffold0590; HSP #1
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 386 - 458
Target Start/End: Complemental strand, 1219 - 1147
Alignment:
Q  386 tatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataa 458  Q
    ||||||| ||||| ||||||||||| ||||| | || |||||||||||||||||||||| |||| ||||||||    
T  1219 tatcatataagtgcttatgtataagctatttctataacaaaagataaaataaagtcaaactattctcatataa 1147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0275 (Bit Score: 41; Significance: 0.00000000000006; HSPs: 1)
Name: scaffold0275
Description:

Target: scaffold0275; HSP #1
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 386 - 458
Target Start/End: Original strand, 2756 - 2828
Alignment:
Q  386 tatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataa 458  Q
    ||||||| ||||| ||||||||||| ||||| | || |||||||||||||||||||||| |||| ||||||||    
T  2756 tatcatataagtgcttatgtataagctatttctataacaaaagataaaataaagtcaaactattctcatataa 2828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0103 (Bit Score: 37; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0103
Description:

Target: scaffold0103; HSP #1
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 401 - 465
Target Start/End: Original strand, 51508 - 51572
Alignment:
Q  401 tatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataa 465  Q
    |||||||||||||||||| || ||||| |||||||||||| ||||| ||||||||| | ||||||    
T  51508 tatgtataagttatttttataacaaaatataaaataaagttaaattgttttcatatcaactataa 51572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0549 (Bit Score: 36; Significance: 0.00000000006; HSPs: 2)
Name: scaffold0549
Description:

Target: scaffold0549; HSP #1
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 378 - 469
Target Start/End: Complemental strand, 1876 - 1786
Alignment:
Q  378 taagcgcttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataagttg 469  Q
    |||||||||| |||| ||||| |||| |||||| || || | || |||||||||||||||||| || |||||||||||||  ||||||||||    
T  1876 taagcgctta-catataagtgcttatatataagataattctataacaaaagataaaataaagttaatttattttcatatacgctataagttg 1786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0549; HSP #2
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 378 - 469
Target Start/End: Complemental strand, 3966 - 3876
Alignment:
Q  378 taagcgcttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataacctataagttg 469  Q
    |||||||||| |||| ||||| |||| |||||| || || | || |||||||||||||||||| || |||||||||||||  ||||||||||    
T  3966 taagcgctta-catataagtgcttatatataagataattctataacaaaagataaaataaagttaatttattttcatatacgctataagttg 3876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 420 - 458
Target Start/End: Complemental strand, 69054 - 69016
Alignment:
Q  420 taccaaaagataaaataaagtcaaattattttcatataa 458  Q
    |||||||| ||||||||||||||||||||||||||||||    
T  69054 taccaaaatataaaataaagtcaaattattttcatataa 69016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0085 (Bit Score: 34; Significance: 0.0000000009; HSPs: 1)
Name: scaffold0085
Description:

Target: scaffold0085; HSP #1
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 424 - 465
Target Start/End: Complemental strand, 34104 - 34063
Alignment:
Q  424 aaaagataaaataaagtcaaattattttcatataacctataa 465  Q
    ||||||||||||||||||||||||||||||||| | ||||||    
T  34104 aaaagataaaataaagtcaaattattttcatatgaactataa 34063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0508 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0508
Description:

Target: scaffold0508; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 383 - 458
Target Start/End: Complemental strand, 9923 - 9848
Alignment:
Q  383 gcttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataa 458  Q
    |||||||||| | ||| ||||||||||||||||| | || ||||| ||||||| ||||||||   |||||||||||    
T  9923 gcttatcatataggtgcttatgtataagttatttctataacaaaaaataaaattaagtcaaaaagttttcatataa 9848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0349 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0349
Description:

Target: scaffold0349; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 423 - 458
Target Start/End: Complemental strand, 18475 - 18440
Alignment:
Q  423 caaaagataaaataaagtcaaattattttcatataa 458  Q
    |||||||||||||||||||||||| |||||||||||    
T  18475 caaaagataaaataaagtcaaattcttttcatataa 18440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0287 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0287
Description:

Target: scaffold0287; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 423 - 452
Target Start/End: Complemental strand, 10158 - 10129
Alignment:
Q  423 caaaagataaaataaagtcaaattattttc 452  Q
    ||||||||||||||||||||||||||||||    
T  10158 caaaagataaaataaagtcaaattattttc 10129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0221 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0221
Description:

Target: scaffold0221; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 401 - 458
Target Start/End: Original strand, 20235 - 20292
Alignment:
Q  401 tatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataa 458  Q
    |||||||||||||||| | ||  |||| ||||||||| |||||||| |||||||||||    
T  20235 tatgtataagttatttctttaataaaacataaaataatgtcaaattgttttcatataa 20292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0153 (Bit Score: 30; Significance: 0.0000002; HSPs: 2)
Name: scaffold0153
Description:

Target: scaffold0153; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 429 - 466
Target Start/End: Complemental strand, 6600 - 6563
Alignment:
Q  429 ataaaataaagtcaaattattttcatataacctataag 466  Q
    |||||||||||||||| ||||||||||||| |||||||    
T  6600 ataaaataaagtcaaactattttcatataagctataag 6563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0153; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 429 - 466
Target Start/End: Complemental strand, 13620 - 13583
Alignment:
Q  429 ataaaataaagtcaaattattttcatataacctataag 466  Q
    |||||||||||||||| ||||||||||||| |||||||    
T  13620 ataaaataaagtcaaactattttcatataagctataag 13583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0060 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0060
Description:

Target: scaffold0060; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 385 - 450
Target Start/End: Complemental strand, 63431 - 63366
Alignment:
Q  385 ttatcatacaagtgtttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattt 450  Q
    |||||||| ||||| || | |||||| ||||||| || ||||||||||||||||| ||||| ||||    
T  63431 ttatcatataagtgcttgtttataagctatttttataacaaaagataaaataaagacaaatgattt 63366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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