View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5927_low_3 (Length: 237)
Name: NF5927_low_3
Description: NF5927
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5927_low_3 |
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Alignment Details
Target: chr7 (Bit Score: 206; Significance: 1e-113; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 206; E-Value: 1e-113
Query Start/End: Original strand, 1 - 214
Target Start/End: Original strand, 28638055 - 28638268
Alignment:
| Q |
1 |
aattttgcctccaaaagtgcacaattataaagttatccaactctaaattttagtgagctaagattaagatatgcactttaaatttaattattggtggata |
100 |
Q |
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| T |
28638055 |
aattttgcctccaaaagtgcacaattataaagttatccaactctaaattttagtgagctaagattaagatatgcactttaaatttaattattggtgaata |
28638154 |
T |
|
| Q |
101 |
caacacttatgcacgttactactcacttattgaaagagtatgctgcaaatctaattatgccatcaaaaagctactttctctcaactaaccaacattttgt |
200 |
Q |
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|||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
28638155 |
caacacttatccacgttactactcacttattgaaagagtatgctgcaaatctaattatgccatcaaaaagctactttctctcaactaaccaacattttgt |
28638254 |
T |
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| Q |
201 |
ttcctttagcaaac |
214 |
Q |
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|||||||||||||| |
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| T |
28638255 |
ttcctttagcaaac |
28638268 |
T |
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