View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5930_high_16 (Length: 238)
Name: NF5930_high_16
Description: NF5930
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5930_high_16 |
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Alignment Details
Target: chr1 (Bit Score: 219; Significance: 1e-120; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 219; E-Value: 1e-120
Query Start/End: Original strand, 1 - 223
Target Start/End: Original strand, 35482063 - 35482285
Alignment:
| Q |
1 |
tctgctagggaaatcctttatcgaacgagctagatcttgagcacctttaccatcatatctcttctccacaatgaaacgtgctgcagcagcacgttgggaa |
100 |
Q |
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| T |
35482063 |
tctgctagggaaatcctttatcgaacgagctagatcttgagcacctttaccatcatatctcttctccacaatgaaacgcgctgcagcagcacgttgggaa |
35482162 |
T |
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| Q |
101 |
gtggagaggagacgaatttcatataaaacttcagcaccaccgctatcaaagtaagatagaatctcttcatcagtgttggcctgtacaagagtgtcacgaa |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
35482163 |
gtggagaggagacgaatttcatataaaacttcagcaccaccgctatcaaagtaagatagaatctcttcatcagtgttggcctgtacaagagtgtcacgaa |
35482262 |
T |
|
| Q |
201 |
cttgagttgcgactatgatacga |
223 |
Q |
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||||||||||||||||||||||| |
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| T |
35482263 |
cttgagttgcgactatgatacga |
35482285 |
T |
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